Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.59.43
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "c0cb9eedbae179b560cd7291f88f8985",
"name": "M1_20170530_2110_c2_dsRNA_K8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "10:00:04"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.1264
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.34204e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.92615
Ran for 550 frames Cell Events: 11 mean_circ: 0.911994
Ran for 1050 frames Cell Events: 25 mean_circ: 0.927161
Ran for 2050 frames Cell Events: 54 mean_circ: 0.928928
Ran for 3050 frames Cell Events: 87 mean_circ: 0.937126
Ran for 3550 frames Cell Events: 101 mean_circ: 0.936252
Ran for 4050 frames Cell Events: 117 mean_circ: 0.936856
Ran for 4550 frames Cell Events: 140 mean_circ: 0.938139
Ran for 5050 frames Cell Events: 150 mean_circ: 0.938017
Ran for 6550 frames Cell Events: 203 mean_circ: 0.938321
Ran for 7050 frames Cell Events: 219 mean_circ: 0.938618
Ran for 8550 frames Cell Events: 256 mean_circ: 0.936522
Ran for 9050 frames Cell Events: 273 mean_circ: 0.935423
Ran for 9550 frames Cell Events: 287 mean_circ: 0.934695
Ran for 11050 frames Cell Events: 338 mean_circ: 0.93249
Ran for 11550 frames Cell Events: 350 mean_circ: 0.932268
Ran for 12050 frames Cell Events: 359 mean_circ: 0.932438
Ran for 13050 frames Cell Events: 388 mean_circ: 0.933405
Ran for 13550 frames Cell Events: 403 mean_circ: 0.933591
Ran for 14050 frames Cell Events: 415 mean_circ: 0.934202
Ran for 14550 frames Cell Events: 419 mean_circ: 0.934131
Ran for 15050 frames Cell Events: 436 mean_circ: 0.934364
Ran for 15550 frames Cell Events: 451 mean_circ: 0.934364
Ran for 16050 frames Cell Events: 470 mean_circ: 0.934565
Ran for 16550 frames Cell Events: 480 mean_circ: 0.934385
Ran for 17050 frames Cell Events: 493 mean_circ: 0.934833
Ran for 17550 frames Cell Events: 506 mean_circ: 0.935049
Ran for 18050 frames Cell Events: 518 mean_circ: 0.935051
Ran for 18550 frames Cell Events: 535 mean_circ: 0.935468
Ran for 19550 frames Cell Events: 557 mean_circ: 0.934269
Ran for 20550 frames Cell Events: 583 mean_circ: 0.934488
Ran for 21050 frames Cell Events: 597 mean_circ: 0.934188
Ran for 22550 frames Cell Events: 630 mean_circ: 0.934533
Ran for 23550 frames Cell Events: 651 mean_circ: 0.934996
Ran for 24050 frames Cell Events: 661 mean_circ: 0.934545
Ran for 24550 frames Cell Events: 677 mean_circ: 0.934676
Ran for 25550 frames Cell Events: 690 mean_circ: 0.934698
Ran for 27050 frames Cell Events: 741 mean_circ: 0.934557
Ran for 28050 frames Cell Events: 766 mean_circ: 0.934572
Ran for 28550 frames Cell Events: 784 mean_circ: 0.934491
Ran for 29050 frames Cell Events: 796 mean_circ: 0.934406
Ran for 29550 frames Cell Events: 808 mean_circ: 0.93467
Ran for 30550 frames Cell Events: 834 mean_circ: 0.934479
Ran for 31050 frames Cell Events: 845 mean_circ: 0.934359
Ran for 31550 frames Cell Events: 868 mean_circ: 0.934596
Ran for 32050 frames Cell Events: 886 mean_circ: 0.934693
Ran for 32550 frames Cell Events: 898 mean_circ: 0.934693
Ran for 33050 frames Cell Events: 906 mean_circ: 0.934302
Ran for 33550 frames Cell Events: 913 mean_circ: 0.934488
Ran for 34550 frames Cell Events: 945 mean_circ: 0.934732
Ran for 35050 frames Cell Events: 957 mean_circ: 0.934784
Ran for 35550 frames Cell Events: 972 mean_circ: 0.934744
Ran for 36050 frames Cell Events: 989 mean_circ: 0.935034
Ran for 36550 frames Cell Events: 1004 mean_circ: 0.935133
Ran for 37050 frames Cell Events: 1024 mean_circ: 0.934943
Ran for 37550 frames Cell Events: 1038 mean_circ: 0.935043
Ran for 38550 frames Cell Events: 1054 mean_circ: 0.935034
Ran for 39550 frames Cell Events: 1078 mean_circ: 0.935138
Ran for 40050 frames Cell Events: 1087 mean_circ: 0.935122
Ran for 40550 frames Cell Events: 1107 mean_circ: 0.935346
Ran for 41550 frames Cell Events: 1137 mean_circ: 0.935465
Ran for 42050 frames Cell Events: 1154 mean_circ: 0.935535
Ran for 43050 frames Cell Events: 1181 mean_circ: 0.935308
Ran for 43550 frames Cell Events: 1204 mean_circ: 0.935328
Ran for 44050 frames Cell Events: 1216 mean_circ: 0.935433
Ran for 44550 frames Cell Events: 1247 mean_circ: 0.935485
Ran for 45550 frames Cell Events: 1275 mean_circ: 0.93534
Ran for 46050 frames Cell Events: 1287 mean_circ: 0.935303
Ran for 46550 frames Cell Events: 1300 mean_circ: 0.935245
Ran for 47050 frames Cell Events: 1321 mean_circ: 0.935121
Ran for 48050 frames Cell Events: 1354 mean_circ: 0.935384
Ran for 48550 frames Cell Events: 1367 mean_circ: 0.935431
Ran for 49550 frames Cell Events: 1395 mean_circ: 0.93559
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Ran for 52050 frames Cell Events: 1459 mean_circ: 0.935341
Ran for 52550 frames Cell Events: 1467 mean_circ: 0.935403
Ran for 53550 frames Cell Events: 1493 mean_circ: 0.935441
Ran for 54050 frames Cell Events: 1501 mean_circ: 0.935518
Ran for 54550 frames Cell Events: 1518 mean_circ: 0.93553
Ran for 55050 frames Cell Events: 1532 mean_circ: 0.93546
Ran for 56550 frames Cell Events: 1573 mean_circ: 0.935457
Ran for 57050 frames Cell Events: 1583 mean_circ: 0.935506
Ran for 57550 frames Cell Events: 1605 mean_circ: 0.935671
Ran for 58550 frames Cell Events: 1643 mean_circ: 0.935692
Ran for 59050 frames Cell Events: 1657 mean_circ: 0.935466
Ran for 60050 frames Cell Events: 1673 mean_circ: 0.935315
Ran for 60550 frames Cell Events: 1676 mean_circ: 0.935336
Ran for 61050 frames Cell Events: 1686 mean_circ: 0.935455
Ran for 62050 frames Cell Events: 1710 mean_circ: 0.93568
Ran for 62550 frames Cell Events: 1727 mean_circ: 0.935708
Ran for 63050 frames Cell Events: 1751 mean_circ: 0.935706
Ran for 63550 frames Cell Events: 1760 mean_circ: 0.935687
Ran for 64050 frames Cell Events: 1770 mean_circ: 0.935608
Ran for 64550 frames Cell Events: 1788 mean_circ: 0.935594
Ran for 65050 frames Cell Events: 1799 mean_circ: 0.935716
Ran for 65550 frames Cell Events: 1818 mean_circ: 0.935667
Ran for 66050 frames Cell Events: 1829 mean_circ: 0.9357
Ran for 66550 frames Cell Events: 1846 mean_circ: 0.935739
Ran for 67550 frames Cell Events: 1876 mean_circ: 0.935933
Ran for 68550 frames Cell Events: 1901 mean_circ: 0.935956
Ran for 69050 frames Cell Events: 1905 mean_circ: 0.935953
Ran for 70050 frames Cell Events: 1932 mean_circ: 0.935805
Ran for 70550 frames Cell Events: 1942 mean_circ: 0.935808
Ran for 71050 frames Cell Events: 1951 mean_circ: 0.935785
Ran for 71550 frames Cell Events: 1962 mean_circ: 0.935654
Ran for 73050 frames Cell Events: 1996 mean_circ: 0.935471
Ran for 74050 frames Cell Events: 2017 mean_circ: 0.935452
Ran for 75050 frames Cell Events: 2044 mean_circ: 0.935628
Ran for 75550 frames Cell Events: 2056 mean_circ: 0.935602
Ran for 76050 frames Cell Events: 2067 mean_circ: 0.935674
Ran for 76550 frames Cell Events: 2090 mean_circ: 0.935536
Ran for 77050 frames Cell Events: 2100 mean_circ: 0.935506
Ran for 78050 frames Cell Events: 2133 mean_circ: 0.935437
Ran for 78550 frames Cell Events: 2147 mean_circ: 0.935491
Ran for 79050 frames Cell Events: 2161 mean_circ: 0.93556
Ran for 79550 frames Cell Events: 2175 mean_circ: 0.935598
Ran for 80550 frames Cell Events: 2210 mean_circ: 0.935474
Ran for 81050 frames Cell Events: 2228 mean_circ: 0.935393
Ran for 81550 frames Cell Events: 2242 mean_circ: 0.935262
Ran for 82550 frames Cell Events: 2272 mean_circ: 0.935126
Ran for 83550 frames Cell Events: 2304 mean_circ: 0.935283
Ran for 84050 frames Cell Events: 2316 mean_circ: 0.935086
Ran for 84550 frames Cell Events: 2326 mean_circ: 0.935171
Ran for 85050 frames Cell Events: 2345 mean_circ: 0.935184
Ran for 85550 frames Cell Events: 2363 mean_circ: 0.935058
Ran for 86050 frames Cell Events: 2373 mean_circ: 0.935153
Ran for 86550 frames Cell Events: 2387 mean_circ: 0.935214
Ran for 87050 frames Cell Events: 2408 mean_circ: 0.935195
Ran for 87550 frames Cell Events: 2422 mean_circ: 0.935253
Ran for 88050 frames Cell Events: 2440 mean_circ: 0.935195
Ran for 89050 frames Cell Events: 2466 mean_circ: 0.935247
Ran for 89550 frames Cell Events: 2477 mean_circ: 0.935339
Ran for 90050 frames Cell Events: 2491 mean_circ: 0.935263
Ran for 90550 frames Cell Events: 2508 mean_circ: 0.935218
Ran for 91050 frames Cell Events: 2519 mean_circ: 0.935051
Ran for 91550 frames Cell Events: 2528 mean_circ: 0.935029
Ran for 92050 frames Cell Events: 2536 mean_circ: 0.935091
Ran for 92550 frames Cell Events: 2552 mean_circ: 0.935185
Ran for 93050 frames Cell Events: 2564 mean_circ: 0.935138
Ran for 94050 frames Cell Events: 2589 mean_circ: 0.935123
Ran for 94550 frames Cell Events: 2602 mean_circ: 0.935167
Ran for 95550 frames Cell Events: 2631 mean_circ: 0.935203
Ran for 96050 frames Cell Events: 2645 mean_circ: 0.935281
Ran for 97050 frames Cell Events: 2664 mean_circ: 0.935139
Ran for 97550 frames Cell Events: 2682 mean_circ: 0.935046
Ran for 98050 frames Cell Events: 2699 mean_circ: 0.935072
Ran for 98550 frames Cell Events: 2710 mean_circ: 0.935054
Ran for 99050 frames Cell Events: 2718 mean_circ: 0.935043
Ran for 99550 frames Cell Events: 2730 mean_circ: 0.934972
Ran for 100050 frames Cell Events: 2747 mean_circ: 0.934955
Ran for 100550 frames Cell Events: 2759 mean_circ: 0.934998
Ran for 101050 frames Cell Events: 2770 mean_circ: 0.93494
Ran for 101550 frames Cell Events: 2782 mean_circ: 0.935024
Ran for 102050 frames Cell Events: 2791 mean_circ: 0.935042
Ran for 103050 frames Cell Events: 2814 mean_circ: 0.935085
Ran for 103550 frames Cell Events: 2826 mean_circ: 0.935092
Ran for 104050 frames Cell Events: 2837 mean_circ: 0.935095
Ran for 104550 frames Cell Events: 2841 mean_circ: 0.935113
Ran for 105050 frames Cell Events: 2848 mean_circ: 0.93515
Ran for 106550 frames Cell Events: 2896 mean_circ: 0.935133
Ran for 107050 frames Cell Events: 2902 mean_circ: 0.935154
Ran for 107550 frames Cell Events: 2922 mean_circ: 0.935182
Ran for 108050 frames Cell Events: 2934 mean_circ: 0.935189
Ran for 108550 frames Cell Events: 2943 mean_circ: 0.935209
Ran for 109050 frames Cell Events: 2951 mean_circ: 0.935264
Ran for 109550 frames Cell Events: 2961 mean_circ: 0.935326
Ran for 110050 frames Cell Events: 2980 mean_circ: 0.935449
Ran for 110550 frames Cell Events: 2991 mean_circ: 0.935485
Ran for 111050 frames Cell Events: 3009 mean_circ: 0.93543
Ran for 111550 frames Cell Events: 3023 mean_circ: 0.935357
Ran for 112050 frames Cell Events: 3035 mean_circ: 0.935365
Ran for 112550 frames Cell Events: 3046 mean_circ: 0.935319
Ran for 113050 frames Cell Events: 3063 mean_circ: 0.935349
Ran for 114050 frames Cell Events: 3088 mean_circ: 0.935384
Ran for 114550 frames Cell Events: 3098 mean_circ: 0.935449
Ran for 115550 frames Cell Events: 3117 mean_circ: 0.935427
Ran for 116550 frames Cell Events: 3149 mean_circ: 0.935486
Ran for 117050 frames Cell Events: 3165 mean_circ: 0.935474
Ran for 117550 frames Cell Events: 3181 mean_circ: 0.935423
Ran for 118050 frames Cell Events: 3192 mean_circ: 0.935412
Ran for 119050 frames Cell Events: 3221 mean_circ: 0.935433
Ran for 120050 frames Cell Events: 3248 mean_circ: 0.935472
Ran for 120550 frames Cell Events: 3274 mean_circ: 0.935472
Ran for 121050 frames Cell Events: 3291 mean_circ: 0.935245
Ran for 121550 frames Cell Events: 3303 mean_circ: 0.935269
Ran for 122050 frames Cell Events: 3322 mean_circ: 0.935265
Ran for 123050 frames Cell Events: 3348 mean_circ: 0.935225
Ran for 123550 frames Cell Events: 3366 mean_circ: 0.935285
Ran for 124550 frames Cell Events: 3398 mean_circ: 0.935312
Ran for 126050 frames Cell Events: 3446 mean_circ: 0.935246
Ran for 126550 frames Cell Events: 3460 mean_circ: 0.935292
Ran for 127550 frames Cell Events: 3495 mean_circ: 0.935409
Ran for 128050 frames Cell Events: 3504 mean_circ: 0.935408
Ran for 128550 frames Cell Events: 3522 mean_circ: 0.935399
Ran for 129050 frames Cell Events: 3540 mean_circ: 0.935461
Ran for 129550 frames Cell Events: 3555 mean_circ: 0.935461
Ran for 130050 frames Cell Events: 3567 mean_circ: 0.935501
Ran for 130550 frames Cell Events: 3583 mean_circ: 0.935497
Ran for 131050 frames Cell Events: 3601 mean_circ: 0.935556
Ran for 131550 frames Cell Events: 3615 mean_circ: 0.935603
Ran for 132050 frames Cell Events: 3631 mean_circ: 0.935592
Ran for 132550 frames Cell Events: 3649 mean_circ: 0.935571
Ran for 133050 frames Cell Events: 3666 mean_circ: 0.935502
Ran for 133550 frames Cell Events: 3682 mean_circ: 0.935538
Ran for 134050 frames Cell Events: 3692 mean_circ: 0.935579
Ran for 134550 frames Cell Events: 3702 mean_circ: 0.935557
Ran for 135050 frames Cell Events: 3715 mean_circ: 0.935562
Ran for 135550 frames Cell Events: 3722 mean_circ: 0.9356
Ran for 136050 frames Cell Events: 3731 mean_circ: 0.935611
Ran for 136550 frames Cell Events: 3744 mean_circ: 0.935655
Ran for 137050 frames Cell Events: 3758 mean_circ: 0.935661
Ran for 137550 frames Cell Events: 3773 mean_circ: 0.935646
Ran for 138050 frames Cell Events: 3785 mean_circ: 0.93566
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Ran for 139550 frames Cell Events: 3844 mean_circ: 0.935725
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Ran for 141050 frames Cell Events: 3903 mean_circ: 0.93568
Ran for 142050 frames Cell Events: 3936 mean_circ: 0.935633
Ran for 142550 frames Cell Events: 3947 mean_circ: 0.935706
Ran for 143050 frames Cell Events: 3957 mean_circ: 0.935753
Ran for 143550 frames Cell Events: 3970 mean_circ: 0.935745
Ran for 144050 frames Cell Events: 3986 mean_circ: 0.935676
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Ran for 146050 frames Cell Events: 4040 mean_circ: 0.935823
Ran for 146550 frames Cell Events: 4056 mean_circ: 0.935706
Ran for 147050 frames Cell Events: 4066 mean_circ: 0.935719
Ran for 147550 frames Cell Events: 4082 mean_circ: 0.93574
Ran for 148050 frames Cell Events: 4092 mean_circ: 0.935703
Ran for 150050 frames Cell Events: 4165 mean_circ: 0.93568
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Ran for 151050 frames Cell Events: 4200 mean_circ: 0.935641
Ran for 153550 frames Cell Events: 4284 mean_circ: 0.935688
Ran for 154050 frames Cell Events: 4298 mean_circ: 0.935772
Ran for 155550 frames Cell Events: 4339 mean_circ: 0.935827
Ran for 156050 frames Cell Events: 4356 mean_circ: 0.935832
Ran for 157550 frames Cell Events: 4386 mean_circ: 0.935844
Ran for 158550 frames Cell Events: 4432 mean_circ: 0.93595
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Ran for 159550 frames Cell Events: 4470 mean_circ: 0.935941
Ran for 160550 frames Cell Events: 4497 mean_circ: 0.935976
Ran for 162050 frames Cell Events: 4545 mean_circ: 0.935991
Ran for 162550 frames Cell Events: 4563 mean_circ: 0.935973
Ran for 164050 frames Cell Events: 4604 mean_circ: 0.936068
Ran for 164550 frames Cell Events: 4616 mean_circ: 0.936062
Ran for 165050 frames Cell Events: 4629 mean_circ: 0.936049
Ran for 165550 frames Cell Events: 4643 mean_circ: 0.936079
Ran for 166550 frames Cell Events: 4671 mean_circ: 0.936051
Ran for 167050 frames Cell Events: 4693 mean_circ: 0.935995
Ran for 168050 frames Cell Events: 4708 mean_circ: 0.935971
Ran for 168550 frames Cell Events: 4723 mean_circ: 0.936
Ran for 169050 frames Cell Events: 4742 mean_circ: 0.935981
Ran for 169550 frames Cell Events: 4752 mean_circ: 0.93592
Ran for 170550 frames Cell Events: 4783 mean_circ: 0.935917
Ran for 171050 frames Cell Events: 4798 mean_circ: 0.935885
Ran for 171550 frames Cell Events: 4807 mean_circ: 0.93589
Ran for 172550 frames Cell Events: 4833 mean_circ: 0.935911
Ran for 173050 frames Cell Events: 4854 mean_circ: 0.935928
Ran for 173550 frames Cell Events: 4870 mean_circ: 0.936006
Ran for 174050 frames Cell Events: 4882 mean_circ: 0.935999
Ran for 175050 frames Cell Events: 4907 mean_circ: 0.935975
Ran for 176050 frames Cell Events: 4949 mean_circ: 0.935964
Ran for 177050 frames Cell Events: 4986 mean_circ: 0.935965
Ran for 177550 frames Cell Events: 4996 mean_circ: 0.935959
Ran for 178050 frames Cell Events: 5013 mean_circ: 0.935928
Ran for 178550 frames Cell Events: 5024 mean_circ: 0.935929
Ran for 179050 frames Cell Events: 5038 mean_circ: 0.935937
Ran for 180050 frames Cell Events: 5075 mean_circ: 0.935997
Ran for 180550 frames Cell Events: 5089 mean_circ: 0.935973
Ran for 181050 frames Cell Events: 5106 mean_circ: 0.936016
Ran for 181550 frames Cell Events: 5117 mean_circ: 0.936028
Ran for 182050 frames Cell Events: 5133 mean_circ: 0.935999
Ran for 182550 frames Cell Events: 5146 mean_circ: 0.935998
Ran for 183050 frames Cell Events: 5155 mean_circ: 0.936028
Ran for 183550 frames Cell Events: 5166 mean_circ: 0.936014
Ran for 184550 frames Cell Events: 5195 mean_circ: 0.936007
Ran for 186050 frames Cell Events: 5252 mean_circ: 0.935989
Ran for 187050 frames Cell Events: 5281 mean_circ: 0.936009
Ran for 187550 frames Cell Events: 5290 mean_circ: 0.936008
Ran for 188050 frames Cell Events: 5302 mean_circ: 0.93605
Ran for 189550 frames Cell Events: 5347 mean_circ: 0.936074
Ran for 190050 frames Cell Events: 5364 mean_circ: 0.936012
Ran for 192050 frames Cell Events: 5412 mean_circ: 0.93606
Ran for 192550 frames Cell Events: 5434 mean_circ: 0.936006
Ran for 193050 frames Cell Events: 5442 mean_circ: 0.936008
Ran for 194050 frames Cell Events: 5474 mean_circ: 0.936041
Ran for 195050 frames Cell Events: 5501 mean_circ: 0.936036
Ran for 195550 frames Cell Events: 5515 mean_circ: 0.936064
Ran for 196050 frames Cell Events: 5527 mean_circ: 0.936111
Ran for 197050 frames Cell Events: 5550 mean_circ: 0.936135
Ran for 197550 frames Cell Events: 5559 mean_circ: 0.936181
Ran for 198050 frames Cell Events: 5574 mean_circ: 0.936163
Ran for 198550 frames Cell Events: 5579 mean_circ: 0.936149
Ran for 199050 frames Cell Events: 5590 mean_circ: 0.936171
Ran for 200050 frames Cell Events: 5615 mean_circ: 0.93614
Ran for 201550 frames Cell Events: 5657 mean_circ: 0.936039
Ran for 202550 frames Cell Events: 5703 mean_circ: 0.936025
Ran for 203050 frames Cell Events: 5710 mean_circ: 0.936014
Ran for 203550 frames Cell Events: 5727 mean_circ: 0.935977
Ran for 204050 frames Cell Events: 5737 mean_circ: 0.935978
Ran for 204550 frames Cell Events: 5755 mean_circ: 0.935988
Ran for 205050 frames Cell Events: 5765 mean_circ: 0.936005
Ran for 206050 frames Cell Events: 5787 mean_circ: 0.936054
Ran for 207050 frames Cell Events: 5822 mean_circ: 0.935998
Ran for 207550 frames Cell Events: 5837 mean_circ: 0.935998
Ran for 208050 frames Cell Events: 5851 mean_circ: 0.93596
Ran for 208550 frames Cell Events: 5864 mean_circ: 0.935972
Ran for 209550 frames Cell Events: 5893 mean_circ: 0.935843
Ran for 210050 frames Cell Events: 5907 mean_circ: 0.935846
Ran for 210550 frames Cell Events: 5922 mean_circ: 0.935794
Ran for 211550 frames Cell Events: 5960 mean_circ: 0.935806
Ran for 212050 frames Cell Events: 5969 mean_circ: 0.9358
Ran for 212550 frames Cell Events: 5991 mean_circ: 0.935813
Ran for 213050 frames Cell Events: 6003 mean_circ: 0.935824
Ran for 213550 frames Cell Events: 6016 mean_circ: 0.935839
Ran for 214050 frames Cell Events: 6037 mean_circ: 0.935827
Ran for 215050 frames Cell Events: 6079 mean_circ: 0.935831
Ran for 216050 frames Cell Events: 6114 mean_circ: 0.935834
Ran for 216550 frames Cell Events: 6132 mean_circ: 0.935816
Ran for 217050 frames Cell Events: 6138 mean_circ: 0.935829
Ran for 217550 frames Cell Events: 6155 mean_circ: 0.935833
Ran for 218050 frames Cell Events: 6167 mean_circ: 0.935817
Ran for 218550 frames Cell Events: 6180 mean_circ: 0.935828
Ran for 219550 frames Cell Events: 6218 mean_circ: 0.935782
Ran for 220050 frames Cell Events: 6232 mean_circ: 0.935797
Ran for 221050 frames Cell Events: 6265 mean_circ: 0.935758
Ran for 222050 frames Cell Events: 6284 mean_circ: 0.93576
Ran for 222550 frames Cell Events: 6293 mean_circ: 0.935769
Ran for 223050 frames Cell Events: 6308 mean_circ: 0.935746
Ran for 223550 frames Cell Events: 6324 mean_circ: 0.935759
Ran for 224550 frames Cell Events: 6355 mean_circ: 0.935666
Ran for 225550 frames Cell Events: 6377 mean_circ: 0.93567
Ran for 226050 frames Cell Events: 6389 mean_circ: 0.935661
Ran for 226550 frames Cell Events: 6407 mean_circ: 0.935659
Ran for 227050 frames Cell Events: 6415 mean_circ: 0.9357
Ran for 227550 frames Cell Events: 6427 mean_circ: 0.935702
Ran for 228050 frames Cell Events: 6445 mean_circ: 0.935724
Ran for 228550 frames Cell Events: 6459 mean_circ: 0.935754
Ran for 229050 frames Cell Events: 6473 mean_circ: 0.935729
Ran for 229550 frames Cell Events: 6486 mean_circ: 0.935728
Ran for 230050 frames Cell Events: 6502 mean_circ: 0.935726
Ran for 230550 frames Cell Events: 6511 mean_circ: 0.93572
Ran for 231050 frames Cell Events: 6525 mean_circ: 0.93573
Ran for 232050 frames Cell Events: 6549 mean_circ: 0.935741
Ran for 232550 frames Cell Events: 6560 mean_circ: 0.93572
Ran for 233050 frames Cell Events: 6577 mean_circ: 0.935712
Ran for 233550 frames Cell Events: 6594 mean_circ: 0.935713
Ran for 234550 frames Cell Events: 6622 mean_circ: 0.935614
Ran for 235050 frames Cell Events: 6638 mean_circ: 0.935589
Ran for 235550 frames Cell Events: 6660 mean_circ: 0.935569
Ran for 237050 frames Cell Events: 6698 mean_circ: 0.935566
Ran for 238050 frames Cell Events: 6724 mean_circ: 0.935573
Ran for 238550 frames Cell Events: 6733 mean_circ: 0.935557
Ran for 239050 frames Cell Events: 6751 mean_circ: 0.935578
Ran for 240050 frames Cell Events: 6780 mean_circ: 0.935494
Ran for 240550 frames Cell Events: 6805 mean_circ: 0.935468
Ran for 241550 frames Cell Events: 6832 mean_circ: 0.935385
Ran for 242050 frames Cell Events: 6852 mean_circ: 0.935378
Ran for 242550 frames Cell Events: 6867 mean_circ: 0.935407
Ran for 243050 frames Cell Events: 6885 mean_circ: 0.935347
Ran for 243550 frames Cell Events: 6913 mean_circ: 0.93537
Ran for 245050 frames Cell Events: 6960 mean_circ: 0.935415
Ran for 246050 frames Cell Events: 6990 mean_circ: 0.935429
Ran for 246550 frames Cell Events: 7013 mean_circ: 0.935431
Ran for 247050 frames Cell Events: 7034 mean_circ: 0.935392
Ran for 247550 frames Cell Events: 7053 mean_circ: 0.935316
Ran for 248550 frames Cell Events: 7087 mean_circ: 0.935296
Ran for 249050 frames Cell Events: 7102 mean_circ: 0.935293
Ran for 249550 frames Cell Events: 7113 mean_circ: 0.935249
Ran for 250050 frames Cell Events: 7132 mean_circ: 0.93525
Ran for 250550 frames Cell Events: 7147 mean_circ: 0.935248
Ran for 251050 frames Cell Events: 7156 mean_circ: 0.935251
Ran for 252550 frames Cell Events: 7205 mean_circ: 0.935259
Ran for 253050 frames Cell Events: 7222 mean_circ: 0.935275
Ran for 253550 frames Cell Events: 7229 mean_circ: 0.935278
Ran for 254050 frames Cell Events: 7249 mean_circ: 0.935324
Ran for 255050 frames Cell Events: 7284 mean_circ: 0.935335
Ran for 255550 frames Cell Events: 7298 mean_circ: 0.935383
Ran for 256550 frames Cell Events: 7331 mean_circ: 0.935365
Ran for 257550 frames Cell Events: 7374 mean_circ: 0.935371
Ran for 258050 frames Cell Events: 7398 mean_circ: 0.935372
Ran for 258550 frames Cell Events: 7410 mean_circ: 0.935392
Ran for 259550 frames Cell Events: 7450 mean_circ: 0.935423
Ran for 260050 frames Cell Events: 7457 mean_circ: 0.935412
Ran for 260550 frames Cell Events: 7463 mean_circ: 0.935389
Ran for 261050 frames Cell Events: 7483 mean_circ: 0.935414
Ran for 261550 frames Cell Events: 7504 mean_circ: 0.935403
Ran for 262050 frames Cell Events: 7521 mean_circ: 0.935398
Ran for 262550 frames Cell Events: 7546 mean_circ: 0.935436
Ran for 263050 frames Cell Events: 7562 mean_circ: 0.935471
Ran for 264050 frames Cell Events: 7601 mean_circ: 0.935505
Ran for 264550 frames Cell Events: 7614 mean_circ: 0.935508
Ran for 265550 frames Cell Events: 7659 mean_circ: 0.935394
Ran for 266550 frames Cell Events: 7698 mean_circ: 0.935436
Ran for 269550 frames Cell Events: 7805 mean_circ: 0.935477
Ran for 270050 frames Cell Events: 7818 mean_circ: 0.93546
Ran for 270550 frames Cell Events: 7831 mean_circ: 0.93546
Ran for 271050 frames Cell Events: 7848 mean_circ: 0.935444
Ran for 271550 frames Cell Events: 7864 mean_circ: 0.935453
Ran for 272050 frames Cell Events: 7877 mean_circ: 0.935435
Ran for 273050 frames Cell Events: 7908 mean_circ: 0.935499
Ran for 273550 frames Cell Events: 7917 mean_circ: 0.935527
Ran for 274550 frames Cell Events: 7930 mean_circ: 0.935544
Ran for 276050 frames Cell Events: 8002 mean_circ: 0.93553
Ran for 276550 frames Cell Events: 8013 mean_circ: 0.935483
Ran for 277050 frames Cell Events: 8024 mean_circ: 0.935493
Ran for 278050 frames Cell Events: 8052 mean_circ: 0.935492
Ran for 278550 frames Cell Events: 8065 mean_circ: 0.935502
Ran for 279050 frames Cell Events: 8076 mean_circ: 0.9355
Ran for 279550 frames Cell Events: 8081 mean_circ: 0.935481
Ran for 280050 frames Cell Events: 8095 mean_circ: 0.935455
End this measurment..
Stopping time: 1.34218e+009
****************************************
Measurement finished
Mean Circularitiy: 0.935431
Mean Area: 649.268
Mean FL-1 intensity: 3086.65
Mean FL-2 intensity: 4003.88
Mean FL-3 intensity: 0
frames processed: 278026
Total Time: 140248ms
Number of Runs (new bg img) 0
Frames collected: 280343
Skipped frames: 113088
Rescued Frames: 5203890
Samples DAQ: 70086460
Samples written: 140171340
Samples per Channel: 70085670
FPS: 1998.91
Samples per second: 499728
Expected samples/s: 500000
Events: 8105
Events per second: 57.7906
jumped back (PMT): 5256
#Frames read, frequency
# 0 frames :381344
# 1 frames :160332
# 2 frames :5712
# 3 frames :1807
# 4 frames :976
# 5 frames :615
# 6 frames :1863
# 7 frames :2168
# 8 frames :1609
# 9 frames :911
# 10 frames :655
# 11 frames :469
# 12 frames :410
# 13 frames :293
# 14 frames :275
# 15 frames :225
# 16 frames :167
# 17 frames :143
# 18 frames :110
# 19 frames :86
# 20 frames :56
# 21 frames :53
# 22 frames :59
# 23 frames :38
# 24 frames :29
# 25 frames :29
# 26 frames :20
# 27 frames :24
# 28 frames :14
# 29 frames :6
# 30 frames :16
# 31 frames :14
# 32 frames :7
# 33 frames :3
# 34 frames :5
# 35 frames :8
# 36 frames :3
# 37 frames :1
# 38 frames :3
# 39 frames :3
# 40 frames :1
# 41 frames :2
# 42 frames :2
# 45 frames :1
# 46 frames :1
# 47 frames :1
# 48 frames :1
# 50 frames :1
# 51 frames :1
# 54 frames :1
# 57 frames :1
# 58 frames :1
# 63 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.1264
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0