Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_12.21.41
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "3a9a4ee423901f85928eb163607cf109",
"name": "M1_20170603_1848_dsRNA_C2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "10:22:02"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8171 (max 8172) in '8171'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9048
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.6791e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 11 mean_circ: 0.93349
Ran for 2050 frames Cell Events: 67 mean_circ: 0.942233
Ran for 3050 frames Cell Events: 110 mean_circ: 0.942438
Ran for 3550 frames Cell Events: 131 mean_circ: 0.942721
Ran for 4050 frames Cell Events: 157 mean_circ: 0.944086
Ran for 4550 frames Cell Events: 177 mean_circ: 0.944956
Ran for 5550 frames Cell Events: 220 mean_circ: 0.943881
Ran for 7550 frames Cell Events: 296 mean_circ: 0.943636
Ran for 8050 frames Cell Events: 309 mean_circ: 0.943703
Ran for 8550 frames Cell Events: 323 mean_circ: 0.943769
Ran for 10550 frames Cell Events: 396 mean_circ: 0.943875
Ran for 12050 frames Cell Events: 446 mean_circ: 0.944681
Ran for 12550 frames Cell Events: 460 mean_circ: 0.945111
Ran for 13050 frames Cell Events: 473 mean_circ: 0.944638
Ran for 14050 frames Cell Events: 517 mean_circ: 0.944641
Ran for 15050 frames Cell Events: 566 mean_circ: 0.945114
Ran for 17050 frames Cell Events: 630 mean_circ: 0.945468
Ran for 17550 frames Cell Events: 647 mean_circ: 0.945935
Ran for 18050 frames Cell Events: 665 mean_circ: 0.946121
Ran for 19050 frames Cell Events: 702 mean_circ: 0.945442
Ran for 20050 frames Cell Events: 727 mean_circ: 0.945608
Ran for 21050 frames Cell Events: 761 mean_circ: 0.945202
Ran for 21550 frames Cell Events: 786 mean_circ: 0.945202
Ran for 22050 frames Cell Events: 802 mean_circ: 0.945387
Ran for 24050 frames Cell Events: 872 mean_circ: 0.945664
Ran for 25050 frames Cell Events: 904 mean_circ: 0.945783
Ran for 25550 frames Cell Events: 935 mean_circ: 0.9458
Ran for 26550 frames Cell Events: 978 mean_circ: 0.945777
Ran for 27050 frames Cell Events: 991 mean_circ: 0.945925
Ran for 27550 frames Cell Events: 1005 mean_circ: 0.946057
Ran for 28050 frames Cell Events: 1019 mean_circ: 0.946145
Ran for 28550 frames Cell Events: 1034 mean_circ: 0.946224
Ran for 29050 frames Cell Events: 1046 mean_circ: 0.946121
Ran for 31050 frames Cell Events: 1141 mean_circ: 0.945875
Ran for 31550 frames Cell Events: 1156 mean_circ: 0.945999
Ran for 32550 frames Cell Events: 1194 mean_circ: 0.945859
Ran for 33050 frames Cell Events: 1208 mean_circ: 0.94591
Ran for 33550 frames Cell Events: 1231 mean_circ: 0.946088
Ran for 34550 frames Cell Events: 1271 mean_circ: 0.945763
Ran for 35050 frames Cell Events: 1289 mean_circ: 0.945823
Ran for 35550 frames Cell Events: 1310 mean_circ: 0.945813
Ran for 36050 frames Cell Events: 1326 mean_circ: 0.945692
Ran for 36550 frames Cell Events: 1340 mean_circ: 0.94586
Ran for 37050 frames Cell Events: 1368 mean_circ: 0.945988
Ran for 37550 frames Cell Events: 1386 mean_circ: 0.946131
Ran for 38550 frames Cell Events: 1408 mean_circ: 0.945923
Ran for 39050 frames Cell Events: 1427 mean_circ: 0.945932
Ran for 40550 frames Cell Events: 1511 mean_circ: 0.946088
Ran for 41050 frames Cell Events: 1531 mean_circ: 0.946037
Ran for 41550 frames Cell Events: 1548 mean_circ: 0.946143
Ran for 42050 frames Cell Events: 1565 mean_circ: 0.94607
Ran for 42550 frames Cell Events: 1572 mean_circ: 0.946054
Ran for 43050 frames Cell Events: 1588 mean_circ: 0.946076
Ran for 43550 frames Cell Events: 1606 mean_circ: 0.945926
Ran for 44550 frames Cell Events: 1640 mean_circ: 0.945666
Ran for 45050 frames Cell Events: 1658 mean_circ: 0.945712
Ran for 45550 frames Cell Events: 1686 mean_circ: 0.945606
Ran for 46050 frames Cell Events: 1698 mean_circ: 0.945641
Ran for 46550 frames Cell Events: 1718 mean_circ: 0.945559
Ran for 47550 frames Cell Events: 1759 mean_circ: 0.945614
Ran for 48050 frames Cell Events: 1780 mean_circ: 0.94545
Ran for 48550 frames Cell Events: 1798 mean_circ: 0.945503
Ran for 49550 frames Cell Events: 1844 mean_circ: 0.945481
Ran for 50050 frames Cell Events: 1875 mean_circ: 0.945481
Ran for 50550 frames Cell Events: 1892 mean_circ: 0.945528
Ran for 51050 frames Cell Events: 1912 mean_circ: 0.945565
Ran for 52050 frames Cell Events: 1961 mean_circ: 0.945365
Ran for 52550 frames Cell Events: 1982 mean_circ: 0.945381
Ran for 53050 frames Cell Events: 2002 mean_circ: 0.945433
Ran for 53550 frames Cell Events: 2016 mean_circ: 0.945314
Ran for 54050 frames Cell Events: 2032 mean_circ: 0.945341
Ran for 54550 frames Cell Events: 2050 mean_circ: 0.945314
Ran for 55050 frames Cell Events: 2059 mean_circ: 0.945357
Ran for 55550 frames Cell Events: 2077 mean_circ: 0.945432
Ran for 56550 frames Cell Events: 2120 mean_circ: 0.94541
Ran for 57550 frames Cell Events: 2156 mean_circ: 0.945408
Ran for 58050 frames Cell Events: 2174 mean_circ: 0.945478
Ran for 58550 frames Cell Events: 2196 mean_circ: 0.945385
Ran for 59550 frames Cell Events: 2226 mean_circ: 0.945443
Ran for 60050 frames Cell Events: 2247 mean_circ: 0.945489
Ran for 60550 frames Cell Events: 2268 mean_circ: 0.945602
Ran for 62050 frames Cell Events: 2327 mean_circ: 0.94581
Ran for 62550 frames Cell Events: 2353 mean_circ: 0.945833
Ran for 63550 frames Cell Events: 2386 mean_circ: 0.945793
Ran for 64050 frames Cell Events: 2407 mean_circ: 0.945714
Ran for 65550 frames Cell Events: 2460 mean_circ: 0.945662
Ran for 66050 frames Cell Events: 2476 mean_circ: 0.945621
Ran for 66550 frames Cell Events: 2495 mean_circ: 0.945527
Ran for 67050 frames Cell Events: 2511 mean_circ: 0.945527
Ran for 67550 frames Cell Events: 2529 mean_circ: 0.945539
Ran for 68050 frames Cell Events: 2547 mean_circ: 0.945561
Ran for 68550 frames Cell Events: 2564 mean_circ: 0.945707
Ran for 69550 frames Cell Events: 2590 mean_circ: 0.945674
Ran for 70550 frames Cell Events: 2624 mean_circ: 0.945561
Ran for 71050 frames Cell Events: 2638 mean_circ: 0.945585
Ran for 71550 frames Cell Events: 2654 mean_circ: 0.945543
Ran for 72550 frames Cell Events: 2698 mean_circ: 0.945472
Ran for 73050 frames Cell Events: 2718 mean_circ: 0.94543
Ran for 74550 frames Cell Events: 2799 mean_circ: 0.945339
Ran for 76050 frames Cell Events: 2866 mean_circ: 0.945453
Ran for 76550 frames Cell Events: 2879 mean_circ: 0.945395
Ran for 77550 frames Cell Events: 2914 mean_circ: 0.945334
Ran for 78050 frames Cell Events: 2937 mean_circ: 0.945393
Ran for 79550 frames Cell Events: 2995 mean_circ: 0.945328
Ran for 80550 frames Cell Events: 3047 mean_circ: 0.945404
Ran for 81050 frames Cell Events: 3066 mean_circ: 0.945443
Ran for 82550 frames Cell Events: 3141 mean_circ: 0.945238
Ran for 83050 frames Cell Events: 3159 mean_circ: 0.945225
Ran for 83550 frames Cell Events: 3179 mean_circ: 0.945163
Ran for 84050 frames Cell Events: 3204 mean_circ: 0.945217
Ran for 85050 frames Cell Events: 3246 mean_circ: 0.945307
Ran for 86050 frames Cell Events: 3277 mean_circ: 0.945378
Ran for 86550 frames Cell Events: 3294 mean_circ: 0.945436
Ran for 87050 frames Cell Events: 3314 mean_circ: 0.945321
Ran for 87550 frames Cell Events: 3340 mean_circ: 0.945333
Ran for 88050 frames Cell Events: 3367 mean_circ: 0.945359
Ran for 88550 frames Cell Events: 3399 mean_circ: 0.945375
Ran for 90050 frames Cell Events: 3486 mean_circ: 0.94531
Ran for 90550 frames Cell Events: 3504 mean_circ: 0.945304
Ran for 91050 frames Cell Events: 3511 mean_circ: 0.945295
Ran for 91550 frames Cell Events: 3545 mean_circ: 0.945259
Ran for 92550 frames Cell Events: 3585 mean_circ: 0.945243
Ran for 93050 frames Cell Events: 3609 mean_circ: 0.945261
Ran for 93550 frames Cell Events: 3630 mean_circ: 0.945247
Ran for 94050 frames Cell Events: 3640 mean_circ: 0.945272
Ran for 94550 frames Cell Events: 3672 mean_circ: 0.945255
Ran for 95050 frames Cell Events: 3692 mean_circ: 0.945226
Ran for 95550 frames Cell Events: 3716 mean_circ: 0.945139
Ran for 96550 frames Cell Events: 3753 mean_circ: 0.945184
Ran for 97050 frames Cell Events: 3775 mean_circ: 0.945169
Ran for 97550 frames Cell Events: 3794 mean_circ: 0.945111
Ran for 99050 frames Cell Events: 3871 mean_circ: 0.945167
Ran for 100550 frames Cell Events: 3927 mean_circ: 0.945056
Ran for 101050 frames Cell Events: 3954 mean_circ: 0.945062
Ran for 102050 frames Cell Events: 4005 mean_circ: 0.945024
Ran for 102550 frames Cell Events: 4035 mean_circ: 0.945051
Ran for 104050 frames Cell Events: 4115 mean_circ: 0.945206
Ran for 104550 frames Cell Events: 4132 mean_circ: 0.945181
Ran for 105050 frames Cell Events: 4149 mean_circ: 0.945192
Ran for 106050 frames Cell Events: 4202 mean_circ: 0.945212
Ran for 107550 frames Cell Events: 4279 mean_circ: 0.945322
Ran for 108050 frames Cell Events: 4299 mean_circ: 0.945338
Ran for 108550 frames Cell Events: 4312 mean_circ: 0.945316
Ran for 109050 frames Cell Events: 4330 mean_circ: 0.945369
Ran for 109550 frames Cell Events: 4353 mean_circ: 0.945365
Ran for 110050 frames Cell Events: 4369 mean_circ: 0.945333
Ran for 111050 frames Cell Events: 4410 mean_circ: 0.945284
Ran for 111550 frames Cell Events: 4427 mean_circ: 0.9453
Ran for 112050 frames Cell Events: 4446 mean_circ: 0.945358
Ran for 112550 frames Cell Events: 4461 mean_circ: 0.945358
Ran for 113050 frames Cell Events: 4472 mean_circ: 0.945402
Ran for 113550 frames Cell Events: 4485 mean_circ: 0.945417
Ran for 114050 frames Cell Events: 4512 mean_circ: 0.945444
Ran for 114550 frames Cell Events: 4531 mean_circ: 0.945428
Ran for 115050 frames Cell Events: 4547 mean_circ: 0.945472
Ran for 115550 frames Cell Events: 4563 mean_circ: 0.945496
Ran for 116050 frames Cell Events: 4576 mean_circ: 0.945519
Ran for 116550 frames Cell Events: 4600 mean_circ: 0.945565
Ran for 117050 frames Cell Events: 4615 mean_circ: 0.945558
Ran for 117550 frames Cell Events: 4629 mean_circ: 0.945517
Ran for 118050 frames Cell Events: 4653 mean_circ: 0.945558
Ran for 119050 frames Cell Events: 4685 mean_circ: 0.945528
Ran for 119550 frames Cell Events: 4709 mean_circ: 0.945395
Ran for 120050 frames Cell Events: 4724 mean_circ: 0.945358
Ran for 121050 frames Cell Events: 4758 mean_circ: 0.945318
Ran for 122050 frames Cell Events: 4799 mean_circ: 0.945343
Ran for 122550 frames Cell Events: 4810 mean_circ: 0.945351
Ran for 123050 frames Cell Events: 4826 mean_circ: 0.945359
Ran for 124050 frames Cell Events: 4863 mean_circ: 0.945376
Ran for 124550 frames Cell Events: 4889 mean_circ: 0.945352
Ran for 126550 frames Cell Events: 4979 mean_circ: 0.945397
Ran for 128050 frames Cell Events: 5036 mean_circ: 0.945505
Ran for 128550 frames Cell Events: 5055 mean_circ: 0.945484
Ran for 129050 frames Cell Events: 5064 mean_circ: 0.94549
Ran for 130050 frames Cell Events: 5118 mean_circ: 0.945521
Ran for 130550 frames Cell Events: 5149 mean_circ: 0.945464
Ran for 131050 frames Cell Events: 5163 mean_circ: 0.9455
Ran for 132550 frames Cell Events: 5221 mean_circ: 0.945473
Ran for 133050 frames Cell Events: 5243 mean_circ: 0.945496
Ran for 133550 frames Cell Events: 5271 mean_circ: 0.945488
Ran for 134050 frames Cell Events: 5297 mean_circ: 0.945483
Ran for 134550 frames Cell Events: 5324 mean_circ: 0.945486
Ran for 135550 frames Cell Events: 5373 mean_circ: 0.945513
Ran for 136050 frames Cell Events: 5392 mean_circ: 0.945536
Ran for 136550 frames Cell Events: 5415 mean_circ: 0.945565
Ran for 137050 frames Cell Events: 5436 mean_circ: 0.945594
Ran for 137550 frames Cell Events: 5461 mean_circ: 0.94559
Ran for 138050 frames Cell Events: 5482 mean_circ: 0.945587
Ran for 138550 frames Cell Events: 5498 mean_circ: 0.945597
Ran for 139050 frames Cell Events: 5513 mean_circ: 0.945577
Ran for 140050 frames Cell Events: 5556 mean_circ: 0.945532
Ran for 141550 frames Cell Events: 5637 mean_circ: 0.945607
Ran for 142050 frames Cell Events: 5654 mean_circ: 0.94561
Ran for 142550 frames Cell Events: 5679 mean_circ: 0.945651
Ran for 143050 frames Cell Events: 5695 mean_circ: 0.945627
Ran for 143550 frames Cell Events: 5712 mean_circ: 0.945629
Ran for 144050 frames Cell Events: 5734 mean_circ: 0.945634
Ran for 145050 frames Cell Events: 5780 mean_circ: 0.945622
Ran for 146550 frames Cell Events: 5838 mean_circ: 0.945627
Ran for 147050 frames Cell Events: 5856 mean_circ: 0.945634
Ran for 147550 frames Cell Events: 5875 mean_circ: 0.945624
Ran for 148550 frames Cell Events: 5916 mean_circ: 0.945635
Ran for 149050 frames Cell Events: 5940 mean_circ: 0.945619
Ran for 149550 frames Cell Events: 5961 mean_circ: 0.945681
Ran for 150050 frames Cell Events: 5978 mean_circ: 0.945678
Ran for 151050 frames Cell Events: 6028 mean_circ: 0.945703
Ran for 152550 frames Cell Events: 6086 mean_circ: 0.945736
Ran for 153050 frames Cell Events: 6110 mean_circ: 0.945734
Ran for 154050 frames Cell Events: 6137 mean_circ: 0.945759
Ran for 154550 frames Cell Events: 6159 mean_circ: 0.945782
Ran for 155050 frames Cell Events: 6182 mean_circ: 0.945808
Ran for 155550 frames Cell Events: 6205 mean_circ: 0.94584
Ran for 156050 frames Cell Events: 6235 mean_circ: 0.945884
Ran for 156550 frames Cell Events: 6264 mean_circ: 0.945882
Ran for 157050 frames Cell Events: 6280 mean_circ: 0.945867
Ran for 157550 frames Cell Events: 6299 mean_circ: 0.94588
Ran for 158050 frames Cell Events: 6322 mean_circ: 0.945865
Ran for 158550 frames Cell Events: 6342 mean_circ: 0.945902
Ran for 159550 frames Cell Events: 6391 mean_circ: 0.945897
Ran for 160050 frames Cell Events: 6428 mean_circ: 0.945952
Ran for 160550 frames Cell Events: 6451 mean_circ: 0.945907
Ran for 161550 frames Cell Events: 6500 mean_circ: 0.945919
Ran for 162050 frames Cell Events: 6536 mean_circ: 0.94591
Ran for 163050 frames Cell Events: 6600 mean_circ: 0.945968
Ran for 163550 frames Cell Events: 6621 mean_circ: 0.945968
Ran for 164050 frames Cell Events: 6650 mean_circ: 0.945983
Ran for 165050 frames Cell Events: 6695 mean_circ: 0.945983
Ran for 165550 frames Cell Events: 6716 mean_circ: 0.945953
Ran for 166050 frames Cell Events: 6739 mean_circ: 0.945935
Ran for 167050 frames Cell Events: 6801 mean_circ: 0.945965
Ran for 167550 frames Cell Events: 6831 mean_circ: 0.94599
Ran for 169050 frames Cell Events: 6891 mean_circ: 0.946019
Ran for 169550 frames Cell Events: 6905 mean_circ: 0.946025
Ran for 170050 frames Cell Events: 6928 mean_circ: 0.946033
Ran for 170550 frames Cell Events: 6949 mean_circ: 0.946064
Ran for 173050 frames Cell Events: 7116 mean_circ: 0.945951
Ran for 173550 frames Cell Events: 7132 mean_circ: 0.945962
Ran for 174050 frames Cell Events: 7158 mean_circ: 0.945947
Ran for 175050 frames Cell Events: 7203 mean_circ: 0.945924
Ran for 175550 frames Cell Events: 7215 mean_circ: 0.945929
Ran for 177050 frames Cell Events: 7285 mean_circ: 0.946015
Ran for 177550 frames Cell Events: 7307 mean_circ: 0.946023
Ran for 178050 frames Cell Events: 7335 mean_circ: 0.946077
Ran for 178550 frames Cell Events: 7361 mean_circ: 0.946118
Ran for 179050 frames Cell Events: 7374 mean_circ: 0.946131
Ran for 180050 frames Cell Events: 7410 mean_circ: 0.946107
Ran for 180550 frames Cell Events: 7434 mean_circ: 0.946139
Ran for 181050 frames Cell Events: 7460 mean_circ: 0.946123
Ran for 182050 frames Cell Events: 7501 mean_circ: 0.94615
Ran for 184050 frames Cell Events: 7562 mean_circ: 0.946176
Ran for 186550 frames Cell Events: 7658 mean_circ: 0.946251
Ran for 187050 frames Cell Events: 7679 mean_circ: 0.946251
Ran for 187550 frames Cell Events: 7699 mean_circ: 0.946285
Ran for 188550 frames Cell Events: 7749 mean_circ: 0.94634
Ran for 189050 frames Cell Events: 7775 mean_circ: 0.946343
Ran for 190550 frames Cell Events: 7841 mean_circ: 0.946356
Ran for 191050 frames Cell Events: 7861 mean_circ: 0.946357
Ran for 191550 frames Cell Events: 7898 mean_circ: 0.946333
Ran for 192050 frames Cell Events: 7920 mean_circ: 0.946328
Ran for 192550 frames Cell Events: 7946 mean_circ: 0.946347
Ran for 193050 frames Cell Events: 7973 mean_circ: 0.946363
Ran for 194050 frames Cell Events: 8014 mean_circ: 0.946348
Ran for 195550 frames Cell Events: 8095 mean_circ: 0.946326
Ran for 196550 frames Cell Events: 8160 mean_circ: 0.946287
End this measurment..
Stopping time: 1.6792e+009
****************************************
Measurement finished
Mean Circularitiy: 0.946305
Mean Area: 642.813
Mean FL-1 intensity: 3521.51
Mean FL-2 intensity: 3701.54
Mean FL-3 intensity: 0
frames processed: 195617
Total Time: 98501.7ms
Number of Runs (new bg img) 0
Frames collected: 196859
Skipped frames: 144491
Rescued Frames: 3869585
Samples DAQ: 49216079
Samples written: 98429644
Samples per Channel: 49214822
FPS: 1998.53
Samples per second: 499634
Expected samples/s: 500000
Events: 8172
Events per second: 82.9631
jumped back (PMT): 4590
#Frames read, frequency
# 0 frames :276076
# 1 frames :102386
# 2 frames :4393
# 3 frames :1326
# 4 frames :637
# 5 frames :226
# 6 frames :2967
# 7 frames :1551
# 8 frames :1229
# 9 frames :587
# 10 frames :404
# 11 frames :276
# 12 frames :320
# 13 frames :227
# 14 frames :283
# 15 frames :178
# 16 frames :126
# 17 frames :104
# 18 frames :56
# 19 frames :42
# 20 frames :53
# 21 frames :52
# 22 frames :29
# 23 frames :29
# 24 frames :19
# 25 frames :14
# 26 frames :20
# 27 frames :9
# 28 frames :15
# 29 frames :7
# 30 frames :8
# 31 frames :8
# 32 frames :4
# 33 frames :1
# 34 frames :4
# 35 frames :3
# 36 frames :2
# 37 frames :3
# 38 frames :1
# 39 frames :1
# 40 frames :1
# 42 frames :1
# 45 frames :1
# 52 frames :1
# 81 frames :1
# 83 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9048
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0