Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_12.53.11
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "0d74fd2bd705cc2943c0ad0d69497255",
"name": "M1_20170604_1853_dsRNA_H7_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "10:53:32"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8508 (max 8509) in '8508'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.2118
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.76583e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 31 mean_circ: 0.932608
Ran for 2050 frames Cell Events: 68 mean_circ: 0.936521
Ran for 2550 frames Cell Events: 81 mean_circ: 0.93574
Ran for 3050 frames Cell Events: 97 mean_circ: 0.934453
Ran for 3550 frames Cell Events: 121 mean_circ: 0.935584
Ran for 4550 frames Cell Events: 153 mean_circ: 0.934675
Ran for 5050 frames Cell Events: 169 mean_circ: 0.933006
Ran for 6050 frames Cell Events: 208 mean_circ: 0.932575
Ran for 6550 frames Cell Events: 221 mean_circ: 0.932488
Ran for 7050 frames Cell Events: 233 mean_circ: 0.932792
Ran for 7550 frames Cell Events: 252 mean_circ: 0.93257
Ran for 8050 frames Cell Events: 267 mean_circ: 0.931698
Ran for 8550 frames Cell Events: 286 mean_circ: 0.92929
Ran for 9050 frames Cell Events: 295 mean_circ: 0.928387
Ran for 9550 frames Cell Events: 310 mean_circ: 0.928504
Ran for 10050 frames Cell Events: 330 mean_circ: 0.928468
Ran for 10550 frames Cell Events: 350 mean_circ: 0.928752
Ran for 11050 frames Cell Events: 371 mean_circ: 0.929695
Ran for 11550 frames Cell Events: 392 mean_circ: 0.928797
Ran for 12050 frames Cell Events: 405 mean_circ: 0.928941
Ran for 13050 frames Cell Events: 435 mean_circ: 0.929083
Ran for 13550 frames Cell Events: 448 mean_circ: 0.929578
Ran for 14050 frames Cell Events: 473 mean_circ: 0.930033
Ran for 14550 frames Cell Events: 484 mean_circ: 0.929986
Ran for 15050 frames Cell Events: 498 mean_circ: 0.929737
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Ran for 16050 frames Cell Events: 538 mean_circ: 0.929138
Ran for 16550 frames Cell Events: 552 mean_circ: 0.929401
Ran for 17050 frames Cell Events: 576 mean_circ: 0.930206
Ran for 17550 frames Cell Events: 589 mean_circ: 0.929939
Ran for 18050 frames Cell Events: 606 mean_circ: 0.930358
Ran for 18550 frames Cell Events: 622 mean_circ: 0.93015
Ran for 19050 frames Cell Events: 642 mean_circ: 0.92993
Ran for 19550 frames Cell Events: 658 mean_circ: 0.929831
Ran for 20050 frames Cell Events: 674 mean_circ: 0.929648
Ran for 21050 frames Cell Events: 693 mean_circ: 0.930024
Ran for 21550 frames Cell Events: 706 mean_circ: 0.93008
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Ran for 22550 frames Cell Events: 749 mean_circ: 0.929221
Ran for 23050 frames Cell Events: 765 mean_circ: 0.929121
Ran for 23550 frames Cell Events: 781 mean_circ: 0.928921
Ran for 24050 frames Cell Events: 806 mean_circ: 0.928838
Ran for 24550 frames Cell Events: 823 mean_circ: 0.928396
Ran for 25050 frames Cell Events: 843 mean_circ: 0.928657
Ran for 25550 frames Cell Events: 864 mean_circ: 0.928907
Ran for 26050 frames Cell Events: 889 mean_circ: 0.929094
Ran for 26550 frames Cell Events: 900 mean_circ: 0.929152
Ran for 27050 frames Cell Events: 919 mean_circ: 0.929012
Ran for 29050 frames Cell Events: 998 mean_circ: 0.928804
Ran for 29550 frames Cell Events: 1021 mean_circ: 0.92892
Ran for 30050 frames Cell Events: 1040 mean_circ: 0.928459
Ran for 31550 frames Cell Events: 1089 mean_circ: 0.928759
Ran for 32050 frames Cell Events: 1100 mean_circ: 0.929001
Ran for 32550 frames Cell Events: 1123 mean_circ: 0.929032
Ran for 33050 frames Cell Events: 1139 mean_circ: 0.928737
Ran for 33550 frames Cell Events: 1155 mean_circ: 0.928594
Ran for 34050 frames Cell Events: 1168 mean_circ: 0.928742
Ran for 34550 frames Cell Events: 1183 mean_circ: 0.928688
Ran for 35050 frames Cell Events: 1196 mean_circ: 0.928473
Ran for 35550 frames Cell Events: 1214 mean_circ: 0.928485
Ran for 36050 frames Cell Events: 1237 mean_circ: 0.928241
Ran for 36550 frames Cell Events: 1250 mean_circ: 0.928486
Ran for 37550 frames Cell Events: 1286 mean_circ: 0.928885
Ran for 39050 frames Cell Events: 1346 mean_circ: 0.928999
Ran for 39550 frames Cell Events: 1366 mean_circ: 0.929022
Ran for 40050 frames Cell Events: 1388 mean_circ: 0.928911
Ran for 40550 frames Cell Events: 1413 mean_circ: 0.92867
Ran for 41050 frames Cell Events: 1435 mean_circ: 0.928622
Ran for 42050 frames Cell Events: 1472 mean_circ: 0.928678
Ran for 42550 frames Cell Events: 1486 mean_circ: 0.928584
Ran for 43550 frames Cell Events: 1515 mean_circ: 0.928764
Ran for 44050 frames Cell Events: 1532 mean_circ: 0.928843
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Ran for 53050 frames Cell Events: 1827 mean_circ: 0.929026
Ran for 53550 frames Cell Events: 1845 mean_circ: 0.929165
Ran for 54050 frames Cell Events: 1852 mean_circ: 0.929038
Ran for 55050 frames Cell Events: 1875 mean_circ: 0.929027
Ran for 56050 frames Cell Events: 1906 mean_circ: 0.928925
Ran for 56550 frames Cell Events: 1919 mean_circ: 0.929039
Ran for 57050 frames Cell Events: 1929 mean_circ: 0.929119
Ran for 58050 frames Cell Events: 1962 mean_circ: 0.929065
Ran for 58550 frames Cell Events: 1981 mean_circ: 0.9292
Ran for 59550 frames Cell Events: 2021 mean_circ: 0.929208
Ran for 60050 frames Cell Events: 2038 mean_circ: 0.929143
Ran for 60550 frames Cell Events: 2056 mean_circ: 0.929047
Ran for 61050 frames Cell Events: 2078 mean_circ: 0.928925
Ran for 61550 frames Cell Events: 2090 mean_circ: 0.928971
Ran for 63550 frames Cell Events: 2180 mean_circ: 0.928865
Ran for 64050 frames Cell Events: 2198 mean_circ: 0.92889
Ran for 64550 frames Cell Events: 2219 mean_circ: 0.928896
Ran for 65050 frames Cell Events: 2234 mean_circ: 0.92897
Ran for 65550 frames Cell Events: 2251 mean_circ: 0.929051
Ran for 66050 frames Cell Events: 2278 mean_circ: 0.928838
Ran for 66550 frames Cell Events: 2290 mean_circ: 0.928845
Ran for 67050 frames Cell Events: 2303 mean_circ: 0.928857
Ran for 68050 frames Cell Events: 2337 mean_circ: 0.928989
Ran for 68550 frames Cell Events: 2364 mean_circ: 0.929061
Ran for 69050 frames Cell Events: 2375 mean_circ: 0.92911
Ran for 69550 frames Cell Events: 2388 mean_circ: 0.92911
Ran for 70050 frames Cell Events: 2405 mean_circ: 0.929075
Ran for 71050 frames Cell Events: 2436 mean_circ: 0.929143
Ran for 71550 frames Cell Events: 2447 mean_circ: 0.92921
Ran for 72050 frames Cell Events: 2469 mean_circ: 0.929084
Ran for 73050 frames Cell Events: 2505 mean_circ: 0.929077
Ran for 73550 frames Cell Events: 2523 mean_circ: 0.928948
Ran for 74550 frames Cell Events: 2569 mean_circ: 0.929169
Ran for 75050 frames Cell Events: 2588 mean_circ: 0.929089
Ran for 75550 frames Cell Events: 2600 mean_circ: 0.929164
Ran for 76050 frames Cell Events: 2617 mean_circ: 0.92913
Ran for 76550 frames Cell Events: 2635 mean_circ: 0.929058
Ran for 77050 frames Cell Events: 2646 mean_circ: 0.929031
Ran for 77550 frames Cell Events: 2671 mean_circ: 0.928888
Ran for 78550 frames Cell Events: 2721 mean_circ: 0.929022
Ran for 79550 frames Cell Events: 2752 mean_circ: 0.929102
Ran for 80050 frames Cell Events: 2767 mean_circ: 0.929116
Ran for 81550 frames Cell Events: 2826 mean_circ: 0.929264
Ran for 82050 frames Cell Events: 2843 mean_circ: 0.92934
Ran for 82550 frames Cell Events: 2859 mean_circ: 0.929411
Ran for 83050 frames Cell Events: 2868 mean_circ: 0.92923
Ran for 84050 frames Cell Events: 2893 mean_circ: 0.929326
Ran for 84550 frames Cell Events: 2903 mean_circ: 0.929311
Ran for 85050 frames Cell Events: 2914 mean_circ: 0.929387
Ran for 86550 frames Cell Events: 2987 mean_circ: 0.929737
Ran for 87050 frames Cell Events: 3010 mean_circ: 0.929796
Ran for 88050 frames Cell Events: 3056 mean_circ: 0.92957
Ran for 88550 frames Cell Events: 3073 mean_circ: 0.929566
Ran for 89050 frames Cell Events: 3092 mean_circ: 0.929642
Ran for 89550 frames Cell Events: 3114 mean_circ: 0.929723
Ran for 90550 frames Cell Events: 3149 mean_circ: 0.929746
Ran for 91550 frames Cell Events: 3196 mean_circ: 0.929824
Ran for 92550 frames Cell Events: 3226 mean_circ: 0.92991
Ran for 94050 frames Cell Events: 3289 mean_circ: 0.930062
Ran for 94550 frames Cell Events: 3316 mean_circ: 0.929917
Ran for 96550 frames Cell Events: 3375 mean_circ: 0.930136
Ran for 97050 frames Cell Events: 3383 mean_circ: 0.930106
Ran for 98050 frames Cell Events: 3416 mean_circ: 0.930126
Ran for 98550 frames Cell Events: 3428 mean_circ: 0.930143
Ran for 99550 frames Cell Events: 3467 mean_circ: 0.930264
Ran for 100050 frames Cell Events: 3490 mean_circ: 0.93029
Ran for 100550 frames Cell Events: 3517 mean_circ: 0.930439
Ran for 101050 frames Cell Events: 3531 mean_circ: 0.930428
Ran for 101550 frames Cell Events: 3538 mean_circ: 0.930401
Ran for 102050 frames Cell Events: 3551 mean_circ: 0.930444
Ran for 102550 frames Cell Events: 3570 mean_circ: 0.930372
Ran for 103050 frames Cell Events: 3585 mean_circ: 0.930355
Ran for 103550 frames Cell Events: 3599 mean_circ: 0.930392
Ran for 104050 frames Cell Events: 3610 mean_circ: 0.930424
Ran for 105050 frames Cell Events: 3644 mean_circ: 0.93039
Ran for 106050 frames Cell Events: 3673 mean_circ: 0.930465
Ran for 106550 frames Cell Events: 3688 mean_circ: 0.93049
Ran for 107550 frames Cell Events: 3736 mean_circ: 0.930449
Ran for 108050 frames Cell Events: 3745 mean_circ: 0.930485
Ran for 108550 frames Cell Events: 3754 mean_circ: 0.930512
Ran for 109050 frames Cell Events: 3771 mean_circ: 0.930538
Ran for 109550 frames Cell Events: 3788 mean_circ: 0.930514
Ran for 110050 frames Cell Events: 3800 mean_circ: 0.930558
Ran for 110550 frames Cell Events: 3813 mean_circ: 0.930524
Ran for 111050 frames Cell Events: 3825 mean_circ: 0.930557
Ran for 111550 frames Cell Events: 3844 mean_circ: 0.930561
Ran for 112050 frames Cell Events: 3852 mean_circ: 0.930519
Ran for 112550 frames Cell Events: 3877 mean_circ: 0.930619
Ran for 113050 frames Cell Events: 3891 mean_circ: 0.930631
Ran for 114050 frames Cell Events: 3920 mean_circ: 0.930675
Ran for 114550 frames Cell Events: 3926 mean_circ: 0.930674
Ran for 115050 frames Cell Events: 3941 mean_circ: 0.930715
Ran for 115550 frames Cell Events: 3954 mean_circ: 0.930713
Ran for 116050 frames Cell Events: 3963 mean_circ: 0.930765
Ran for 116550 frames Cell Events: 3978 mean_circ: 0.930771
Ran for 117050 frames Cell Events: 3986 mean_circ: 0.930741
Ran for 117550 frames Cell Events: 4013 mean_circ: 0.93079
Ran for 118050 frames Cell Events: 4025 mean_circ: 0.930647
Ran for 118550 frames Cell Events: 4040 mean_circ: 0.930641
Ran for 120050 frames Cell Events: 4099 mean_circ: 0.930628
Ran for 120550 frames Cell Events: 4116 mean_circ: 0.930616
Ran for 121050 frames Cell Events: 4131 mean_circ: 0.930654
Ran for 121550 frames Cell Events: 4149 mean_circ: 0.930655
Ran for 122550 frames Cell Events: 4191 mean_circ: 0.930729
Ran for 123050 frames Cell Events: 4202 mean_circ: 0.930744
Ran for 123550 frames Cell Events: 4221 mean_circ: 0.930739
Ran for 124050 frames Cell Events: 4238 mean_circ: 0.930721
Ran for 124550 frames Cell Events: 4252 mean_circ: 0.930707
Ran for 125050 frames Cell Events: 4270 mean_circ: 0.930727
Ran for 125550 frames Cell Events: 4283 mean_circ: 0.930703
Ran for 126050 frames Cell Events: 4303 mean_circ: 0.930684
Ran for 126550 frames Cell Events: 4319 mean_circ: 0.930666
Ran for 127550 frames Cell Events: 4357 mean_circ: 0.930652
Ran for 128050 frames Cell Events: 4367 mean_circ: 0.930626
Ran for 128550 frames Cell Events: 4378 mean_circ: 0.930651
Ran for 129050 frames Cell Events: 4396 mean_circ: 0.930653
Ran for 130550 frames Cell Events: 4462 mean_circ: 0.930697
Ran for 132050 frames Cell Events: 4521 mean_circ: 0.930651
Ran for 132550 frames Cell Events: 4542 mean_circ: 0.930648
Ran for 134050 frames Cell Events: 4613 mean_circ: 0.930517
Ran for 134550 frames Cell Events: 4629 mean_circ: 0.930562
Ran for 136550 frames Cell Events: 4713 mean_circ: 0.93049
Ran for 137050 frames Cell Events: 4731 mean_circ: 0.930495
Ran for 137550 frames Cell Events: 4743 mean_circ: 0.930502
Ran for 138050 frames Cell Events: 4757 mean_circ: 0.930515
Ran for 139050 frames Cell Events: 4794 mean_circ: 0.930511
Ran for 139550 frames Cell Events: 4809 mean_circ: 0.930506
Ran for 140050 frames Cell Events: 4822 mean_circ: 0.930485
Ran for 140550 frames Cell Events: 4830 mean_circ: 0.930494
Ran for 141050 frames Cell Events: 4846 mean_circ: 0.930492
Ran for 142050 frames Cell Events: 4871 mean_circ: 0.930565
Ran for 142550 frames Cell Events: 4892 mean_circ: 0.930587
Ran for 143050 frames Cell Events: 4909 mean_circ: 0.93066
Ran for 144550 frames Cell Events: 4968 mean_circ: 0.930614
Ran for 145550 frames Cell Events: 5022 mean_circ: 0.930585
Ran for 146050 frames Cell Events: 5040 mean_circ: 0.930587
Ran for 146550 frames Cell Events: 5054 mean_circ: 0.930615
Ran for 147050 frames Cell Events: 5069 mean_circ: 0.930632
Ran for 147550 frames Cell Events: 5090 mean_circ: 0.930613
Ran for 148050 frames Cell Events: 5122 mean_circ: 0.930524
Ran for 148550 frames Cell Events: 5138 mean_circ: 0.930546
Ran for 149050 frames Cell Events: 5157 mean_circ: 0.930593
Ran for 150050 frames Cell Events: 5190 mean_circ: 0.930607
Ran for 150550 frames Cell Events: 5213 mean_circ: 0.930639
Ran for 151050 frames Cell Events: 5221 mean_circ: 0.930622
Ran for 151550 frames Cell Events: 5244 mean_circ: 0.930636
Ran for 152050 frames Cell Events: 5250 mean_circ: 0.930647
Ran for 152550 frames Cell Events: 5265 mean_circ: 0.930635
Ran for 153050 frames Cell Events: 5281 mean_circ: 0.930583
Ran for 153550 frames Cell Events: 5297 mean_circ: 0.930599
Ran for 154050 frames Cell Events: 5315 mean_circ: 0.930631
Ran for 154550 frames Cell Events: 5329 mean_circ: 0.930596
Ran for 155050 frames Cell Events: 5345 mean_circ: 0.930622
Ran for 158050 frames Cell Events: 5460 mean_circ: 0.930675
Ran for 158550 frames Cell Events: 5470 mean_circ: 0.930692
Ran for 159050 frames Cell Events: 5482 mean_circ: 0.930719
Ran for 159550 frames Cell Events: 5498 mean_circ: 0.930726
Ran for 160050 frames Cell Events: 5510 mean_circ: 0.930764
Ran for 160550 frames Cell Events: 5532 mean_circ: 0.930805
Ran for 161050 frames Cell Events: 5547 mean_circ: 0.930804
Ran for 162050 frames Cell Events: 5601 mean_circ: 0.930868
Ran for 163050 frames Cell Events: 5631 mean_circ: 0.9308
Ran for 163550 frames Cell Events: 5640 mean_circ: 0.930794
Ran for 164050 frames Cell Events: 5658 mean_circ: 0.930804
Ran for 164550 frames Cell Events: 5676 mean_circ: 0.930776
Ran for 165050 frames Cell Events: 5688 mean_circ: 0.930795
Ran for 165550 frames Cell Events: 5703 mean_circ: 0.930804
Ran for 166050 frames Cell Events: 5726 mean_circ: 0.930784
Ran for 166550 frames Cell Events: 5734 mean_circ: 0.930827
Ran for 167550 frames Cell Events: 5764 mean_circ: 0.93078
Ran for 168050 frames Cell Events: 5791 mean_circ: 0.930751
Ran for 168550 frames Cell Events: 5802 mean_circ: 0.9308
Ran for 169050 frames Cell Events: 5820 mean_circ: 0.930788
Ran for 169550 frames Cell Events: 5849 mean_circ: 0.930726
Ran for 170050 frames Cell Events: 5860 mean_circ: 0.930699
Ran for 170550 frames Cell Events: 5876 mean_circ: 0.930714
Ran for 172050 frames Cell Events: 5924 mean_circ: 0.930777
Ran for 172550 frames Cell Events: 5939 mean_circ: 0.93074
Ran for 173050 frames Cell Events: 5951 mean_circ: 0.930704
Ran for 173550 frames Cell Events: 5966 mean_circ: 0.930705
Ran for 174050 frames Cell Events: 5988 mean_circ: 0.930723
Ran for 176050 frames Cell Events: 6051 mean_circ: 0.930689
Ran for 176550 frames Cell Events: 6061 mean_circ: 0.930724
Ran for 177050 frames Cell Events: 6073 mean_circ: 0.93074
Ran for 178050 frames Cell Events: 6118 mean_circ: 0.930806
Ran for 178550 frames Cell Events: 6150 mean_circ: 0.930646
Ran for 179050 frames Cell Events: 6170 mean_circ: 0.930684
Ran for 180050 frames Cell Events: 6228 mean_circ: 0.930695
Ran for 182050 frames Cell Events: 6296 mean_circ: 0.930775
Ran for 182550 frames Cell Events: 6310 mean_circ: 0.930812
Ran for 183050 frames Cell Events: 6328 mean_circ: 0.930752
Ran for 184050 frames Cell Events: 6377 mean_circ: 0.93073
Ran for 184550 frames Cell Events: 6385 mean_circ: 0.930768
Ran for 185050 frames Cell Events: 6401 mean_circ: 0.93075
Ran for 186050 frames Cell Events: 6430 mean_circ: 0.930794
Ran for 186550 frames Cell Events: 6446 mean_circ: 0.930795
Ran for 187550 frames Cell Events: 6477 mean_circ: 0.930725
Ran for 188050 frames Cell Events: 6498 mean_circ: 0.930786
Ran for 188550 frames Cell Events: 6505 mean_circ: 0.930765
Ran for 189050 frames Cell Events: 6515 mean_circ: 0.930781
Ran for 189550 frames Cell Events: 6539 mean_circ: 0.930775
Ran for 190050 frames Cell Events: 6554 mean_circ: 0.930751
Ran for 190550 frames Cell Events: 6570 mean_circ: 0.930784
Ran for 191050 frames Cell Events: 6586 mean_circ: 0.930846
Ran for 192050 frames Cell Events: 6637 mean_circ: 0.930859
Ran for 192550 frames Cell Events: 6658 mean_circ: 0.930841
Ran for 193050 frames Cell Events: 6678 mean_circ: 0.930789
Ran for 193550 frames Cell Events: 6698 mean_circ: 0.93082
Ran for 194050 frames Cell Events: 6724 mean_circ: 0.930857
Ran for 194550 frames Cell Events: 6744 mean_circ: 0.930865
Ran for 195050 frames Cell Events: 6765 mean_circ: 0.930873
Ran for 195550 frames Cell Events: 6778 mean_circ: 0.930896
Ran for 196050 frames Cell Events: 6789 mean_circ: 0.93091
Ran for 196550 frames Cell Events: 6808 mean_circ: 0.930895
Ran for 197050 frames Cell Events: 6826 mean_circ: 0.930902
Ran for 197550 frames Cell Events: 6847 mean_circ: 0.9309
Ran for 198050 frames Cell Events: 6862 mean_circ: 0.930881
Ran for 198550 frames Cell Events: 6876 mean_circ: 0.930869
Ran for 199050 frames Cell Events: 6894 mean_circ: 0.930867
Ran for 199550 frames Cell Events: 6909 mean_circ: 0.930868
Ran for 200050 frames Cell Events: 6925 mean_circ: 0.930853
Ran for 200550 frames Cell Events: 6934 mean_circ: 0.930833
Ran for 202050 frames Cell Events: 6987 mean_circ: 0.930914
Ran for 202550 frames Cell Events: 7002 mean_circ: 0.93094
Ran for 203050 frames Cell Events: 7021 mean_circ: 0.93094
Ran for 204550 frames Cell Events: 7075 mean_circ: 0.930916
Ran for 205050 frames Cell Events: 7090 mean_circ: 0.930932
Ran for 205550 frames Cell Events: 7110 mean_circ: 0.930893
Ran for 206550 frames Cell Events: 7138 mean_circ: 0.930851
Ran for 207550 frames Cell Events: 7162 mean_circ: 0.93088
Ran for 208050 frames Cell Events: 7168 mean_circ: 0.930876
Ran for 208550 frames Cell Events: 7198 mean_circ: 0.930847
Ran for 209050 frames Cell Events: 7226 mean_circ: 0.930812
Ran for 209550 frames Cell Events: 7245 mean_circ: 0.930745
Ran for 210050 frames Cell Events: 7265 mean_circ: 0.930717
Ran for 210550 frames Cell Events: 7289 mean_circ: 0.930702
Ran for 211550 frames Cell Events: 7320 mean_circ: 0.93067
Ran for 213050 frames Cell Events: 7380 mean_circ: 0.930699
Ran for 213550 frames Cell Events: 7389 mean_circ: 0.930687
Ran for 214050 frames Cell Events: 7408 mean_circ: 0.930712
Ran for 214550 frames Cell Events: 7429 mean_circ: 0.930724
Ran for 215550 frames Cell Events: 7483 mean_circ: 0.930723
Ran for 216550 frames Cell Events: 7529 mean_circ: 0.930771
Ran for 217050 frames Cell Events: 7538 mean_circ: 0.930768
Ran for 219050 frames Cell Events: 7612 mean_circ: 0.930782
Ran for 219550 frames Cell Events: 7630 mean_circ: 0.930739
Ran for 220050 frames Cell Events: 7638 mean_circ: 0.930724
Ran for 221050 frames Cell Events: 7662 mean_circ: 0.930735
Ran for 222550 frames Cell Events: 7723 mean_circ: 0.930742
Ran for 223050 frames Cell Events: 7739 mean_circ: 0.930659
Ran for 223550 frames Cell Events: 7748 mean_circ: 0.930667
Ran for 224050 frames Cell Events: 7754 mean_circ: 0.930671
Ran for 224550 frames Cell Events: 7765 mean_circ: 0.930647
Ran for 225050 frames Cell Events: 7780 mean_circ: 0.93064
Ran for 225550 frames Cell Events: 7798 mean_circ: 0.930654
Ran for 226050 frames Cell Events: 7810 mean_circ: 0.930647
Ran for 226550 frames Cell Events: 7828 mean_circ: 0.930659
Ran for 227050 frames Cell Events: 7839 mean_circ: 0.930647
Ran for 227550 frames Cell Events: 7859 mean_circ: 0.930644
Ran for 229050 frames Cell Events: 7902 mean_circ: 0.930661
Ran for 229550 frames Cell Events: 7919 mean_circ: 0.930609
Ran for 230050 frames Cell Events: 7943 mean_circ: 0.930589
Ran for 230550 frames Cell Events: 7961 mean_circ: 0.930619
Ran for 231050 frames Cell Events: 7969 mean_circ: 0.930646
Ran for 231550 frames Cell Events: 7980 mean_circ: 0.930618
Ran for 232050 frames Cell Events: 7986 mean_circ: 0.930625
Ran for 232550 frames Cell Events: 7996 mean_circ: 0.930613
Ran for 233050 frames Cell Events: 8005 mean_circ: 0.930617
Ran for 233550 frames Cell Events: 8019 mean_circ: 0.930623
Ran for 234050 frames Cell Events: 8036 mean_circ: 0.93064
Ran for 234550 frames Cell Events: 8052 mean_circ: 0.930655
Ran for 235050 frames Cell Events: 8072 mean_circ: 0.930625
Ran for 235550 frames Cell Events: 8102 mean_circ: 0.930629
Ran for 236050 frames Cell Events: 8114 mean_circ: 0.930634
Ran for 236550 frames Cell Events: 8129 mean_circ: 0.930638
Ran for 237050 frames Cell Events: 8147 mean_circ: 0.930639
Ran for 237550 frames Cell Events: 8165 mean_circ: 0.930623
Ran for 238050 frames Cell Events: 8178 mean_circ: 0.930643
Ran for 238550 frames Cell Events: 8196 mean_circ: 0.930598
Ran for 239050 frames Cell Events: 8203 mean_circ: 0.930618
Ran for 239550 frames Cell Events: 8224 mean_circ: 0.930567
Ran for 240050 frames Cell Events: 8243 mean_circ: 0.930553
Ran for 241050 frames Cell Events: 8295 mean_circ: 0.930535
Ran for 241550 frames Cell Events: 8310 mean_circ: 0.930544
Ran for 242050 frames Cell Events: 8329 mean_circ: 0.930556
Ran for 242550 frames Cell Events: 8347 mean_circ: 0.930553
Ran for 244050 frames Cell Events: 8393 mean_circ: 0.930574
Ran for 245050 frames Cell Events: 8431 mean_circ: 0.930604
End this measurment..
Stopping time: 1.76595e+009
****************************************
Measurement finished
Mean Circularitiy: 0.930599
Mean Area: 640.262
Mean FL-1 intensity: 3228.65
Mean FL-2 intensity: 4692.87
Mean FL-3 intensity: 0
frames processed: 246098
Total Time: 123426ms
Number of Runs (new bg img) 0
Frames collected: 246718
Skipped frames: 136402
Rescued Frames: 4823420
Samples DAQ: 61679548
Samples written: 123358782
Samples per Channel: 61679391
FPS: 1998.91
Samples per second: 499726
Expected samples/s: 500000
Events: 8509
Events per second: 68.9399
jumped back (PMT): 11
#Frames read, frequency
# 0 frames :330351
# 1 frames :145716
# 2 frames :5431
# 3 frames :1374
# 4 frames :697
# 5 frames :256
# 6 frames :3191
# 7 frames :2213
# 8 frames :1425
# 9 frames :661
# 10 frames :366
# 11 frames :247
# 12 frames :351
# 13 frames :223
# 14 frames :238
# 15 frames :154
# 16 frames :143
# 17 frames :85
# 18 frames :46
# 19 frames :43
# 20 frames :43
# 21 frames :26
# 22 frames :26
# 23 frames :24
# 24 frames :18
# 25 frames :11
# 26 frames :8
# 27 frames :13
# 28 frames :5
# 29 frames :6
# 30 frames :2
# 31 frames :2
# 32 frames :4
# 33 frames :2
# 36 frames :1
# 38 frames :3
# 39 frames :2
# 41 frames :1
# 42 frames :1
# 49 frames :1
# 50 frames :1
# 90 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.2118
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0