Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.01.22
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "cef8e7363389196f8b4e65603086378f",
"name": "M1_20170604_2033_dsRNA_G7_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:01:46"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10001 (max 10002) in
'10001'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.2003
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.77181e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 28 mean_circ: 0.921631
Ran for 1050 frames Cell Events: 49 mean_circ: 0.938518
Ran for 1550 frames Cell Events: 62 mean_circ: 0.939092
Ran for 2050 frames Cell Events: 83 mean_circ: 0.937837
Ran for 2550 frames Cell Events: 100 mean_circ: 0.938646
Ran for 3050 frames Cell Events: 123 mean_circ: 0.93899
Ran for 4550 frames Cell Events: 171 mean_circ: 0.938325
Ran for 5050 frames Cell Events: 193 mean_circ: 0.93776
Ran for 6050 frames Cell Events: 243 mean_circ: 0.940226
Ran for 6550 frames Cell Events: 263 mean_circ: 0.939459
Ran for 7050 frames Cell Events: 289 mean_circ: 0.938245
Ran for 7550 frames Cell Events: 303 mean_circ: 0.938995
Ran for 8050 frames Cell Events: 319 mean_circ: 0.938644
Ran for 9050 frames Cell Events: 357 mean_circ: 0.938434
Ran for 9550 frames Cell Events: 372 mean_circ: 0.937682
Ran for 10550 frames Cell Events: 417 mean_circ: 0.937811
Ran for 11050 frames Cell Events: 437 mean_circ: 0.937646
Ran for 11550 frames Cell Events: 453 mean_circ: 0.937286
Ran for 13050 frames Cell Events: 511 mean_circ: 0.937161
Ran for 14050 frames Cell Events: 546 mean_circ: 0.937594
Ran for 15050 frames Cell Events: 591 mean_circ: 0.937388
Ran for 15550 frames Cell Events: 610 mean_circ: 0.936981
Ran for 16050 frames Cell Events: 630 mean_circ: 0.936964
Ran for 18050 frames Cell Events: 708 mean_circ: 0.936498
Ran for 19550 frames Cell Events: 768 mean_circ: 0.936241
Ran for 20050 frames Cell Events: 788 mean_circ: 0.93647
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Ran for 21050 frames Cell Events: 828 mean_circ: 0.936542
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Ran for 22050 frames Cell Events: 862 mean_circ: 0.93707
Ran for 22550 frames Cell Events: 885 mean_circ: 0.936998
Ran for 23050 frames Cell Events: 915 mean_circ: 0.937048
Ran for 25550 frames Cell Events: 1015 mean_circ: 0.937964
Ran for 26050 frames Cell Events: 1033 mean_circ: 0.938158
Ran for 26550 frames Cell Events: 1050 mean_circ: 0.938048
Ran for 27050 frames Cell Events: 1076 mean_circ: 0.938063
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Ran for 28050 frames Cell Events: 1114 mean_circ: 0.937923
Ran for 28550 frames Cell Events: 1144 mean_circ: 0.937883
Ran for 31050 frames Cell Events: 1225 mean_circ: 0.937881
Ran for 32050 frames Cell Events: 1266 mean_circ: 0.937721
Ran for 32550 frames Cell Events: 1288 mean_circ: 0.937735
Ran for 33050 frames Cell Events: 1306 mean_circ: 0.937696
Ran for 33550 frames Cell Events: 1329 mean_circ: 0.937656
Ran for 34050 frames Cell Events: 1351 mean_circ: 0.937676
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Ran for 35050 frames Cell Events: 1384 mean_circ: 0.937656
Ran for 35550 frames Cell Events: 1407 mean_circ: 0.937591
Ran for 36050 frames Cell Events: 1431 mean_circ: 0.937531
Ran for 36550 frames Cell Events: 1454 mean_circ: 0.937486
Ran for 37050 frames Cell Events: 1470 mean_circ: 0.937591
Ran for 38050 frames Cell Events: 1511 mean_circ: 0.937739
Ran for 39550 frames Cell Events: 1564 mean_circ: 0.937719
Ran for 40050 frames Cell Events: 1585 mean_circ: 0.937736
Ran for 40550 frames Cell Events: 1608 mean_circ: 0.937836
Ran for 41050 frames Cell Events: 1637 mean_circ: 0.937695
Ran for 41550 frames Cell Events: 1654 mean_circ: 0.937508
Ran for 42050 frames Cell Events: 1675 mean_circ: 0.93743
Ran for 42550 frames Cell Events: 1695 mean_circ: 0.93763
Ran for 43050 frames Cell Events: 1710 mean_circ: 0.937512
Ran for 44050 frames Cell Events: 1745 mean_circ: 0.93753
Ran for 44550 frames Cell Events: 1765 mean_circ: 0.937569
Ran for 45550 frames Cell Events: 1799 mean_circ: 0.937335
Ran for 46050 frames Cell Events: 1818 mean_circ: 0.937398
Ran for 47050 frames Cell Events: 1845 mean_circ: 0.937354
Ran for 47550 frames Cell Events: 1862 mean_circ: 0.937308
Ran for 48050 frames Cell Events: 1868 mean_circ: 0.937358
Ran for 49550 frames Cell Events: 1936 mean_circ: 0.937051
Ran for 50050 frames Cell Events: 1956 mean_circ: 0.936949
Ran for 50550 frames Cell Events: 1970 mean_circ: 0.937015
Ran for 51050 frames Cell Events: 1985 mean_circ: 0.937135
Ran for 51550 frames Cell Events: 2007 mean_circ: 0.937157
Ran for 53050 frames Cell Events: 2068 mean_circ: 0.936865
Ran for 53550 frames Cell Events: 2078 mean_circ: 0.936787
Ran for 54050 frames Cell Events: 2090 mean_circ: 0.936734
Ran for 54550 frames Cell Events: 2112 mean_circ: 0.936636
Ran for 55050 frames Cell Events: 2130 mean_circ: 0.936575
Ran for 56050 frames Cell Events: 2172 mean_circ: 0.936601
Ran for 56550 frames Cell Events: 2202 mean_circ: 0.936565
Ran for 57050 frames Cell Events: 2213 mean_circ: 0.936464
Ran for 57550 frames Cell Events: 2235 mean_circ: 0.936461
Ran for 58050 frames Cell Events: 2251 mean_circ: 0.936518
Ran for 59050 frames Cell Events: 2302 mean_circ: 0.936508
Ran for 60050 frames Cell Events: 2335 mean_circ: 0.93652
Ran for 60550 frames Cell Events: 2348 mean_circ: 0.936498
Ran for 61050 frames Cell Events: 2365 mean_circ: 0.936463
Ran for 61550 frames Cell Events: 2388 mean_circ: 0.936472
Ran for 62050 frames Cell Events: 2411 mean_circ: 0.936398
Ran for 62550 frames Cell Events: 2440 mean_circ: 0.936399
Ran for 63050 frames Cell Events: 2452 mean_circ: 0.936404
Ran for 63550 frames Cell Events: 2467 mean_circ: 0.936288
Ran for 64550 frames Cell Events: 2515 mean_circ: 0.936302
Ran for 66050 frames Cell Events: 2578 mean_circ: 0.936274
Ran for 66550 frames Cell Events: 2604 mean_circ: 0.936255
Ran for 67550 frames Cell Events: 2638 mean_circ: 0.936141
Ran for 68550 frames Cell Events: 2678 mean_circ: 0.936216
Ran for 69050 frames Cell Events: 2688 mean_circ: 0.936236
Ran for 69550 frames Cell Events: 2700 mean_circ: 0.936246
Ran for 71050 frames Cell Events: 2774 mean_circ: 0.936048
Ran for 71550 frames Cell Events: 2802 mean_circ: 0.936064
Ran for 73050 frames Cell Events: 2870 mean_circ: 0.936064
Ran for 73550 frames Cell Events: 2896 mean_circ: 0.936035
Ran for 74050 frames Cell Events: 2906 mean_circ: 0.93609
Ran for 74550 frames Cell Events: 2929 mean_circ: 0.936138
Ran for 75050 frames Cell Events: 2942 mean_circ: 0.936141
Ran for 76050 frames Cell Events: 2976 mean_circ: 0.936105
Ran for 77050 frames Cell Events: 3022 mean_circ: 0.936105
Ran for 77550 frames Cell Events: 3039 mean_circ: 0.936096
Ran for 78050 frames Cell Events: 3057 mean_circ: 0.93609
Ran for 81050 frames Cell Events: 3190 mean_circ: 0.935968
Ran for 81550 frames Cell Events: 3217 mean_circ: 0.935877
Ran for 83550 frames Cell Events: 3299 mean_circ: 0.935709
Ran for 84050 frames Cell Events: 3323 mean_circ: 0.935831
Ran for 84550 frames Cell Events: 3346 mean_circ: 0.93588
Ran for 85050 frames Cell Events: 3367 mean_circ: 0.935886
Ran for 86050 frames Cell Events: 3424 mean_circ: 0.935742
Ran for 86550 frames Cell Events: 3447 mean_circ: 0.935744
Ran for 87050 frames Cell Events: 3466 mean_circ: 0.935765
Ran for 87550 frames Cell Events: 3492 mean_circ: 0.935831
Ran for 88050 frames Cell Events: 3516 mean_circ: 0.935702
Ran for 88550 frames Cell Events: 3529 mean_circ: 0.935668
Ran for 89050 frames Cell Events: 3546 mean_circ: 0.935561
Ran for 89550 frames Cell Events: 3567 mean_circ: 0.935571
Ran for 91050 frames Cell Events: 3619 mean_circ: 0.935606
Ran for 91550 frames Cell Events: 3640 mean_circ: 0.935621
Ran for 92550 frames Cell Events: 3675 mean_circ: 0.935647
Ran for 93050 frames Cell Events: 3695 mean_circ: 0.935586
Ran for 93550 frames Cell Events: 3714 mean_circ: 0.935569
Ran for 94550 frames Cell Events: 3753 mean_circ: 0.935469
Ran for 95550 frames Cell Events: 3802 mean_circ: 0.935617
Ran for 96550 frames Cell Events: 3833 mean_circ: 0.935678
Ran for 97050 frames Cell Events: 3847 mean_circ: 0.935623
Ran for 97550 frames Cell Events: 3861 mean_circ: 0.935573
Ran for 98050 frames Cell Events: 3879 mean_circ: 0.935612
Ran for 98550 frames Cell Events: 3898 mean_circ: 0.935653
Ran for 99050 frames Cell Events: 3908 mean_circ: 0.935626
Ran for 100050 frames Cell Events: 3947 mean_circ: 0.935599
Ran for 100550 frames Cell Events: 3960 mean_circ: 0.935593
Ran for 101050 frames Cell Events: 3984 mean_circ: 0.935513
Ran for 101550 frames Cell Events: 4003 mean_circ: 0.935532
Ran for 102050 frames Cell Events: 4022 mean_circ: 0.93564
Ran for 103550 frames Cell Events: 4078 mean_circ: 0.935473
Ran for 104050 frames Cell Events: 4098 mean_circ: 0.935466
Ran for 104550 frames Cell Events: 4116 mean_circ: 0.935462
Ran for 106050 frames Cell Events: 4168 mean_circ: 0.935619
Ran for 106550 frames Cell Events: 4193 mean_circ: 0.935663
Ran for 107050 frames Cell Events: 4205 mean_circ: 0.935656
Ran for 107550 frames Cell Events: 4228 mean_circ: 0.935673
Ran for 108550 frames Cell Events: 4272 mean_circ: 0.935724
Ran for 109050 frames Cell Events: 4285 mean_circ: 0.93572
Ran for 109550 frames Cell Events: 4302 mean_circ: 0.935754
Ran for 110550 frames Cell Events: 4335 mean_circ: 0.935697
Ran for 111550 frames Cell Events: 4388 mean_circ: 0.935789
Ran for 112550 frames Cell Events: 4432 mean_circ: 0.935841
Ran for 113050 frames Cell Events: 4455 mean_circ: 0.935841
Ran for 113550 frames Cell Events: 4475 mean_circ: 0.935799
Ran for 114050 frames Cell Events: 4494 mean_circ: 0.935925
Ran for 115050 frames Cell Events: 4543 mean_circ: 0.93598
Ran for 115550 frames Cell Events: 4568 mean_circ: 0.935967
Ran for 116550 frames Cell Events: 4624 mean_circ: 0.935936
Ran for 117550 frames Cell Events: 4666 mean_circ: 0.935948
Ran for 118050 frames Cell Events: 4685 mean_circ: 0.935966
Ran for 118550 frames Cell Events: 4704 mean_circ: 0.935978
Ran for 119050 frames Cell Events: 4722 mean_circ: 0.935989
Ran for 119550 frames Cell Events: 4744 mean_circ: 0.936006
Ran for 120050 frames Cell Events: 4774 mean_circ: 0.935971
Ran for 120550 frames Cell Events: 4809 mean_circ: 0.935949
Ran for 121550 frames Cell Events: 4847 mean_circ: 0.935899
Ran for 122050 frames Cell Events: 4863 mean_circ: 0.935873
Ran for 122550 frames Cell Events: 4879 mean_circ: 0.935911
Ran for 123050 frames Cell Events: 4897 mean_circ: 0.93591
Ran for 123550 frames Cell Events: 4914 mean_circ: 0.935899
Ran for 124050 frames Cell Events: 4938 mean_circ: 0.935942
Ran for 124550 frames Cell Events: 4959 mean_circ: 0.935914
Ran for 125550 frames Cell Events: 4990 mean_circ: 0.935927
Ran for 126050 frames Cell Events: 5012 mean_circ: 0.935937
Ran for 126550 frames Cell Events: 5023 mean_circ: 0.935939
Ran for 128050 frames Cell Events: 5105 mean_circ: 0.936002
Ran for 129050 frames Cell Events: 5147 mean_circ: 0.935909
Ran for 130050 frames Cell Events: 5185 mean_circ: 0.935899
Ran for 130550 frames Cell Events: 5200 mean_circ: 0.935943
Ran for 131050 frames Cell Events: 5212 mean_circ: 0.935902
Ran for 132550 frames Cell Events: 5278 mean_circ: 0.935829
Ran for 133050 frames Cell Events: 5298 mean_circ: 0.935788
Ran for 133550 frames Cell Events: 5320 mean_circ: 0.935811
Ran for 134550 frames Cell Events: 5391 mean_circ: 0.935711
Ran for 136550 frames Cell Events: 5463 mean_circ: 0.935676
Ran for 137550 frames Cell Events: 5504 mean_circ: 0.935606
Ran for 138050 frames Cell Events: 5518 mean_circ: 0.935599
Ran for 138550 frames Cell Events: 5543 mean_circ: 0.935613
Ran for 139050 frames Cell Events: 5563 mean_circ: 0.935635
Ran for 139550 frames Cell Events: 5580 mean_circ: 0.935664
Ran for 140050 frames Cell Events: 5597 mean_circ: 0.935698
Ran for 141050 frames Cell Events: 5641 mean_circ: 0.935628
Ran for 141550 frames Cell Events: 5665 mean_circ: 0.93564
Ran for 142550 frames Cell Events: 5720 mean_circ: 0.935688
Ran for 143050 frames Cell Events: 5736 mean_circ: 0.935708
Ran for 143550 frames Cell Events: 5758 mean_circ: 0.935723
Ran for 144050 frames Cell Events: 5770 mean_circ: 0.935718
Ran for 145050 frames Cell Events: 5808 mean_circ: 0.935727
Ran for 146050 frames Cell Events: 5837 mean_circ: 0.935716
Ran for 146550 frames Cell Events: 5859 mean_circ: 0.935693
Ran for 148050 frames Cell Events: 5943 mean_circ: 0.935713
Ran for 149550 frames Cell Events: 6054 mean_circ: 0.935607
Ran for 150550 frames Cell Events: 6095 mean_circ: 0.935639
Ran for 151050 frames Cell Events: 6111 mean_circ: 0.935612
Ran for 151550 frames Cell Events: 6127 mean_circ: 0.935528
Ran for 152050 frames Cell Events: 6146 mean_circ: 0.935586
Ran for 153050 frames Cell Events: 6184 mean_circ: 0.935529
Ran for 153550 frames Cell Events: 6201 mean_circ: 0.935523
Ran for 154550 frames Cell Events: 6232 mean_circ: 0.935528
Ran for 155050 frames Cell Events: 6252 mean_circ: 0.935531
Ran for 155550 frames Cell Events: 6276 mean_circ: 0.935478
Ran for 156050 frames Cell Events: 6294 mean_circ: 0.935488
Ran for 156550 frames Cell Events: 6321 mean_circ: 0.935509
Ran for 157050 frames Cell Events: 6338 mean_circ: 0.935506
Ran for 157550 frames Cell Events: 6366 mean_circ: 0.93556
Ran for 158050 frames Cell Events: 6392 mean_circ: 0.935567
Ran for 159050 frames Cell Events: 6431 mean_circ: 0.935621
Ran for 159550 frames Cell Events: 6447 mean_circ: 0.935598
Ran for 160050 frames Cell Events: 6469 mean_circ: 0.93556
Ran for 161550 frames Cell Events: 6539 mean_circ: 0.935601
Ran for 162550 frames Cell Events: 6568 mean_circ: 0.935646
Ran for 163050 frames Cell Events: 6597 mean_circ: 0.935661
Ran for 164050 frames Cell Events: 6654 mean_circ: 0.935728
Ran for 166050 frames Cell Events: 6733 mean_circ: 0.935638
Ran for 166550 frames Cell Events: 6757 mean_circ: 0.935601
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Ran for 168550 frames Cell Events: 6850 mean_circ: 0.935669
Ran for 169050 frames Cell Events: 6875 mean_circ: 0.935679
Ran for 169550 frames Cell Events: 6898 mean_circ: 0.935688
Ran for 170050 frames Cell Events: 6917 mean_circ: 0.935673
Ran for 170550 frames Cell Events: 6938 mean_circ: 0.935701
Ran for 171050 frames Cell Events: 6971 mean_circ: 0.935689
Ran for 172550 frames Cell Events: 7046 mean_circ: 0.935704
Ran for 173050 frames Cell Events: 7065 mean_circ: 0.93571
Ran for 173550 frames Cell Events: 7084 mean_circ: 0.93573
Ran for 174050 frames Cell Events: 7104 mean_circ: 0.935729
Ran for 174550 frames Cell Events: 7125 mean_circ: 0.935737
Ran for 175550 frames Cell Events: 7172 mean_circ: 0.935743
Ran for 176050 frames Cell Events: 7196 mean_circ: 0.935735
Ran for 176550 frames Cell Events: 7223 mean_circ: 0.935679
Ran for 177550 frames Cell Events: 7273 mean_circ: 0.935677
Ran for 179050 frames Cell Events: 7347 mean_circ: 0.935723
Ran for 180050 frames Cell Events: 7394 mean_circ: 0.935781
Ran for 180550 frames Cell Events: 7415 mean_circ: 0.93576
Ran for 181050 frames Cell Events: 7436 mean_circ: 0.935782
Ran for 182550 frames Cell Events: 7490 mean_circ: 0.935711
Ran for 184050 frames Cell Events: 7557 mean_circ: 0.935652
Ran for 184550 frames Cell Events: 7586 mean_circ: 0.935686
Ran for 185050 frames Cell Events: 7600 mean_circ: 0.935696
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Ran for 189050 frames Cell Events: 7769 mean_circ: 0.93568
Ran for 190550 frames Cell Events: 7836 mean_circ: 0.93561
Ran for 191050 frames Cell Events: 7854 mean_circ: 0.935608
Ran for 191550 frames Cell Events: 7881 mean_circ: 0.935579
Ran for 192550 frames Cell Events: 7917 mean_circ: 0.935593
Ran for 193050 frames Cell Events: 7932 mean_circ: 0.935601
Ran for 193550 frames Cell Events: 7953 mean_circ: 0.935576
Ran for 194550 frames Cell Events: 8006 mean_circ: 0.935568
Ran for 196050 frames Cell Events: 8073 mean_circ: 0.935579
Ran for 196550 frames Cell Events: 8104 mean_circ: 0.935565
Ran for 197050 frames Cell Events: 8113 mean_circ: 0.935538
Ran for 198550 frames Cell Events: 8180 mean_circ: 0.935541
Ran for 199050 frames Cell Events: 8195 mean_circ: 0.935559
Ran for 200550 frames Cell Events: 8261 mean_circ: 0.93558
Ran for 201050 frames Cell Events: 8278 mean_circ: 0.935615
Ran for 201550 frames Cell Events: 8296 mean_circ: 0.935602
Ran for 202050 frames Cell Events: 8317 mean_circ: 0.935576
Ran for 202550 frames Cell Events: 8342 mean_circ: 0.93557
Ran for 203050 frames Cell Events: 8361 mean_circ: 0.935566
Ran for 203550 frames Cell Events: 8373 mean_circ: 0.935542
Ran for 204550 frames Cell Events: 8423 mean_circ: 0.935515
Ran for 205050 frames Cell Events: 8443 mean_circ: 0.935517
Ran for 207050 frames Cell Events: 8541 mean_circ: 0.935496
Ran for 208050 frames Cell Events: 8584 mean_circ: 0.935417
Ran for 209050 frames Cell Events: 8614 mean_circ: 0.93543
Ran for 210050 frames Cell Events: 8663 mean_circ: 0.935438
Ran for 210550 frames Cell Events: 8685 mean_circ: 0.935414
Ran for 211050 frames Cell Events: 8712 mean_circ: 0.935353
Ran for 212050 frames Cell Events: 8759 mean_circ: 0.935325
Ran for 213050 frames Cell Events: 8799 mean_circ: 0.935312
Ran for 213550 frames Cell Events: 8829 mean_circ: 0.935292
Ran for 214050 frames Cell Events: 8849 mean_circ: 0.935301
Ran for 215050 frames Cell Events: 8898 mean_circ: 0.93531
Ran for 215550 frames Cell Events: 8910 mean_circ: 0.935303
Ran for 216050 frames Cell Events: 8923 mean_circ: 0.93528
Ran for 217050 frames Cell Events: 8960 mean_circ: 0.935258
Ran for 217550 frames Cell Events: 8978 mean_circ: 0.935294
Ran for 219550 frames Cell Events: 9063 mean_circ: 0.935235
Ran for 220550 frames Cell Events: 9111 mean_circ: 0.935246
Ran for 221550 frames Cell Events: 9155 mean_circ: 0.935254
Ran for 222550 frames Cell Events: 9212 mean_circ: 0.935211
Ran for 223050 frames Cell Events: 9235 mean_circ: 0.935163
Ran for 223550 frames Cell Events: 9246 mean_circ: 0.935164
Ran for 224550 frames Cell Events: 9286 mean_circ: 0.935149
Ran for 225050 frames Cell Events: 9308 mean_circ: 0.935118
Ran for 225550 frames Cell Events: 9326 mean_circ: 0.935105
Ran for 228050 frames Cell Events: 9442 mean_circ: 0.935079
Ran for 229050 frames Cell Events: 9485 mean_circ: 0.935021
Ran for 229550 frames Cell Events: 9505 mean_circ: 0.934998
Ran for 230050 frames Cell Events: 9525 mean_circ: 0.935002
Ran for 230550 frames Cell Events: 9547 mean_circ: 0.935018
Ran for 231050 frames Cell Events: 9567 mean_circ: 0.935037
Ran for 232550 frames Cell Events: 9633 mean_circ: 0.935067
Ran for 233050 frames Cell Events: 9648 mean_circ: 0.935077
Ran for 234050 frames Cell Events: 9698 mean_circ: 0.935108
Ran for 234550 frames Cell Events: 9725 mean_circ: 0.935104
Ran for 235550 frames Cell Events: 9764 mean_circ: 0.935088
Ran for 236050 frames Cell Events: 9785 mean_circ: 0.935081
Ran for 237050 frames Cell Events: 9828 mean_circ: 0.934998
Ran for 238550 frames Cell Events: 9858 mean_circ: 0.934971
Ran for 239050 frames Cell Events: 9882 mean_circ: 0.934996
Ran for 239550 frames Cell Events: 9907 mean_circ: 0.934978
Ran for 240050 frames Cell Events: 9926 mean_circ: 0.934994
Ran for 240550 frames Cell Events: 9948 mean_circ: 0.934986
Ran for 241050 frames Cell Events: 9974 mean_circ: 0.934982
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 1.77193e+009
****************************************
Measurement finished
Mean Circularitiy: 0.93497
Mean Area: 624.152
Mean FL-1 intensity: 3354.58
Mean FL-2 intensity: 4686.2
Mean FL-3 intensity: 0
frames processed: 239826
Total Time: 121294ms
Number of Runs (new bg img) 0
Frames collected: 242376
Skipped frames: 179341
Rescued Frames: 6421293
Samples DAQ: 60597883
Samples written: 121187872
Samples per Channel: 60593936
FPS: 1998.26
Samples per second: 499564
Expected samples/s: 500000
Events: 10002
Events per second: 82.461
jumped back (PMT): 13
#Frames read, frequency
# 0 frames :339903
# 1 frames :126000
# 2 frames :4965
# 3 frames :1673
# 4 frames :733
# 5 frames :317
# 6 frames :3847
# 7 frames :1792
# 8 frames :1499
# 9 frames :818
# 10 frames :496
# 11 frames :360
# 12 frames :325
# 13 frames :277
# 14 frames :266
# 15 frames :204
# 16 frames :124
# 17 frames :114
# 18 frames :90
# 19 frames :69
# 20 frames :59
# 21 frames :52
# 22 frames :35
# 23 frames :33
# 24 frames :28
# 25 frames :23
# 26 frames :23
# 27 frames :17
# 28 frames :15
# 29 frames :12
# 30 frames :9
# 31 frames :7
# 32 frames :3
# 33 frames :6
# 34 frames :6
# 35 frames :4
# 36 frames :6
# 37 frames :2
# 38 frames :1
# 39 frames :5
# 40 frames :4
# 41 frames :1
# 42 frames :2
# 43 frames :1
# 44 frames :1
# 46 frames :1
# 47 frames :4
# 48 frames :2
# 49 frames :1
# 50 frames :1
# 52 frames :2
# 53 frames :2
# 55 frames :1
# 56 frames :1
# 58 frames :1
# 60 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.2003
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0