Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.10.07
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "ab286e3285f51e00c3427db8f345369d",
"name": "M1_20170605_1448_dsRNA_J8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:10:27"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8034 (max 8035) in '8034'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.4613
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.83754e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 27 mean_circ: 0.951479
Ran for 1550 frames Cell Events: 43 mean_circ: 0.944621
Ran for 3050 frames Cell Events: 69 mean_circ: 0.945845
Ran for 3550 frames Cell Events: 80 mean_circ: 0.946872
Ran for 4050 frames Cell Events: 88 mean_circ: 0.946211
Ran for 4550 frames Cell Events: 104 mean_circ: 0.945438
Ran for 5050 frames Cell Events: 108 mean_circ: 0.944826
Ran for 5550 frames Cell Events: 113 mean_circ: 0.945381
Ran for 6050 frames Cell Events: 121 mean_circ: 0.94608
Ran for 7050 frames Cell Events: 133 mean_circ: 0.945064
Ran for 7550 frames Cell Events: 137 mean_circ: 0.944755
Ran for 8050 frames Cell Events: 139 mean_circ: 0.94468
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Ran for 9550 frames Cell Events: 176 mean_circ: 0.9452
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Ran for 12050 frames Cell Events: 211 mean_circ: 0.94368
Ran for 12550 frames Cell Events: 220 mean_circ: 0.943847
Ran for 13050 frames Cell Events: 228 mean_circ: 0.944384
Ran for 14050 frames Cell Events: 245 mean_circ: 0.94378
Ran for 14550 frames Cell Events: 250 mean_circ: 0.943985
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Ran for 62050 frames Cell Events: 1178 mean_circ: 0.940644
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Ran for 63050 frames Cell Events: 1204 mean_circ: 0.940433
Ran for 63550 frames Cell Events: 1213 mean_circ: 0.940494
Ran for 64050 frames Cell Events: 1224 mean_circ: 0.940631
Ran for 64550 frames Cell Events: 1238 mean_circ: 0.940526
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Ran for 66550 frames Cell Events: 1274 mean_circ: 0.940441
Ran for 67050 frames Cell Events: 1282 mean_circ: 0.940548
Ran for 67550 frames Cell Events: 1294 mean_circ: 0.940558
Ran for 68050 frames Cell Events: 1301 mean_circ: 0.940425
Ran for 68550 frames Cell Events: 1309 mean_circ: 0.94053
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Ran for 69550 frames Cell Events: 1335 mean_circ: 0.94052
Ran for 70050 frames Cell Events: 1340 mean_circ: 0.94054
Ran for 70550 frames Cell Events: 1352 mean_circ: 0.940532
Ran for 71050 frames Cell Events: 1364 mean_circ: 0.940644
Ran for 71550 frames Cell Events: 1378 mean_circ: 0.940876
Ran for 72050 frames Cell Events: 1386 mean_circ: 0.940821
Ran for 72550 frames Cell Events: 1396 mean_circ: 0.940879
Ran for 73050 frames Cell Events: 1406 mean_circ: 0.940819
Ran for 73550 frames Cell Events: 1419 mean_circ: 0.940824
Ran for 74050 frames Cell Events: 1431 mean_circ: 0.94079
Ran for 74550 frames Cell Events: 1446 mean_circ: 0.940796
Ran for 75550 frames Cell Events: 1461 mean_circ: 0.940875
Ran for 76050 frames Cell Events: 1466 mean_circ: 0.940962
Ran for 76550 frames Cell Events: 1476 mean_circ: 0.940904
Ran for 77050 frames Cell Events: 1483 mean_circ: 0.94071
Ran for 77550 frames Cell Events: 1493 mean_circ: 0.940742
Ran for 78050 frames Cell Events: 1514 mean_circ: 0.940766
Ran for 78550 frames Cell Events: 1528 mean_circ: 0.940867
Ran for 79050 frames Cell Events: 1534 mean_circ: 0.94089
Ran for 79550 frames Cell Events: 1538 mean_circ: 0.940945
Ran for 80050 frames Cell Events: 1547 mean_circ: 0.941041
Ran for 80550 frames Cell Events: 1559 mean_circ: 0.941108
Ran for 81550 frames Cell Events: 1570 mean_circ: 0.941042
Ran for 82050 frames Cell Events: 1578 mean_circ: 0.941076
Ran for 83050 frames Cell Events: 1603 mean_circ: 0.941241
Ran for 83550 frames Cell Events: 1610 mean_circ: 0.941239
Ran for 85050 frames Cell Events: 1636 mean_circ: 0.941339
Ran for 85550 frames Cell Events: 1650 mean_circ: 0.941387
Ran for 86050 frames Cell Events: 1665 mean_circ: 0.941548
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Ran for 87050 frames Cell Events: 1704 mean_circ: 0.941641
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Ran for 91050 frames Cell Events: 1784 mean_circ: 0.941689
Ran for 91550 frames Cell Events: 1793 mean_circ: 0.941645
Ran for 92050 frames Cell Events: 1802 mean_circ: 0.941714
Ran for 92550 frames Cell Events: 1810 mean_circ: 0.941833
Ran for 93050 frames Cell Events: 1816 mean_circ: 0.941911
Ran for 93550 frames Cell Events: 1820 mean_circ: 0.941927
Ran for 94050 frames Cell Events: 1828 mean_circ: 0.941979
Ran for 94550 frames Cell Events: 1839 mean_circ: 0.94199
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Ran for 96550 frames Cell Events: 1880 mean_circ: 0.942203
Ran for 97050 frames Cell Events: 1891 mean_circ: 0.94226
Ran for 97550 frames Cell Events: 1902 mean_circ: 0.942215
Ran for 98550 frames Cell Events: 1921 mean_circ: 0.942209
Ran for 99050 frames Cell Events: 1926 mean_circ: 0.942191
Ran for 99550 frames Cell Events: 1943 mean_circ: 0.942136
Ran for 100050 frames Cell Events: 1958 mean_circ: 0.942199
Ran for 100550 frames Cell Events: 1973 mean_circ: 0.942271
Ran for 101050 frames Cell Events: 1981 mean_circ: 0.942302
Ran for 101550 frames Cell Events: 1989 mean_circ: 0.94232
Ran for 102050 frames Cell Events: 2002 mean_circ: 0.942382
Ran for 102550 frames Cell Events: 2026 mean_circ: 0.942442
Ran for 103050 frames Cell Events: 2033 mean_circ: 0.942404
Ran for 103550 frames Cell Events: 2045 mean_circ: 0.942491
Ran for 104050 frames Cell Events: 2059 mean_circ: 0.942511
Ran for 104550 frames Cell Events: 2068 mean_circ: 0.942475
Ran for 105050 frames Cell Events: 2076 mean_circ: 0.94249
Ran for 105550 frames Cell Events: 2088 mean_circ: 0.942558
Ran for 106550 frames Cell Events: 2113 mean_circ: 0.942759
Ran for 107050 frames Cell Events: 2122 mean_circ: 0.942855
Ran for 107550 frames Cell Events: 2135 mean_circ: 0.942778
Ran for 108550 frames Cell Events: 2163 mean_circ: 0.942757
Ran for 109050 frames Cell Events: 2174 mean_circ: 0.942792
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Ran for 110550 frames Cell Events: 2193 mean_circ: 0.942769
Ran for 111050 frames Cell Events: 2205 mean_circ: 0.942707
Ran for 111550 frames Cell Events: 2211 mean_circ: 0.942735
Ran for 112050 frames Cell Events: 2216 mean_circ: 0.942773
Ran for 112550 frames Cell Events: 2230 mean_circ: 0.94268
Ran for 113050 frames Cell Events: 2239 mean_circ: 0.942662
Ran for 113550 frames Cell Events: 2251 mean_circ: 0.942692
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Ran for 115550 frames Cell Events: 2292 mean_circ: 0.942755
Ran for 116050 frames Cell Events: 2305 mean_circ: 0.942678
Ran for 117050 frames Cell Events: 2327 mean_circ: 0.942735
Ran for 117550 frames Cell Events: 2336 mean_circ: 0.942734
Ran for 118050 frames Cell Events: 2347 mean_circ: 0.942739
Ran for 118550 frames Cell Events: 2357 mean_circ: 0.942731
Ran for 119050 frames Cell Events: 2372 mean_circ: 0.942803
Ran for 119550 frames Cell Events: 2381 mean_circ: 0.942789
Ran for 120050 frames Cell Events: 2389 mean_circ: 0.942734
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Ran for 121550 frames Cell Events: 2421 mean_circ: 0.942867
Ran for 122050 frames Cell Events: 2428 mean_circ: 0.942897
Ran for 123050 frames Cell Events: 2451 mean_circ: 0.942993
Ran for 123550 frames Cell Events: 2458 mean_circ: 0.942924
Ran for 124550 frames Cell Events: 2471 mean_circ: 0.942925
Ran for 125050 frames Cell Events: 2482 mean_circ: 0.942807
Ran for 125550 frames Cell Events: 2492 mean_circ: 0.942869
Ran for 126050 frames Cell Events: 2504 mean_circ: 0.942796
Ran for 127050 frames Cell Events: 2524 mean_circ: 0.942793
Ran for 128050 frames Cell Events: 2544 mean_circ: 0.942861
Ran for 128550 frames Cell Events: 2554 mean_circ: 0.942808
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Ran for 132050 frames Cell Events: 2630 mean_circ: 0.942652
Ran for 132550 frames Cell Events: 2642 mean_circ: 0.942611
Ran for 133050 frames Cell Events: 2654 mean_circ: 0.942673
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Ran for 146050 frames Cell Events: 2964 mean_circ: 0.942474
Ran for 147050 frames Cell Events: 2984 mean_circ: 0.942459
Ran for 149550 frames Cell Events: 3033 mean_circ: 0.942419
Ran for 150050 frames Cell Events: 3046 mean_circ: 0.942349
Ran for 150550 frames Cell Events: 3056 mean_circ: 0.942328
Ran for 151050 frames Cell Events: 3064 mean_circ: 0.942358
Ran for 152550 frames Cell Events: 3104 mean_circ: 0.942371
Ran for 154050 frames Cell Events: 3142 mean_circ: 0.942367
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Ran for 156050 frames Cell Events: 3204 mean_circ: 0.942516
Ran for 156550 frames Cell Events: 3221 mean_circ: 0.942498
Ran for 157050 frames Cell Events: 3229 mean_circ: 0.942484
Ran for 157550 frames Cell Events: 3243 mean_circ: 0.9425
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Ran for 159050 frames Cell Events: 3280 mean_circ: 0.942592
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Ran for 160550 frames Cell Events: 3321 mean_circ: 0.942612
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Ran for 161550 frames Cell Events: 3341 mean_circ: 0.942626
Ran for 162050 frames Cell Events: 3350 mean_circ: 0.942676
Ran for 163050 frames Cell Events: 3367 mean_circ: 0.942621
Ran for 163550 frames Cell Events: 3378 mean_circ: 0.942626
Ran for 164050 frames Cell Events: 3385 mean_circ: 0.942668
Ran for 164550 frames Cell Events: 3409 mean_circ: 0.942675
Ran for 165050 frames Cell Events: 3420 mean_circ: 0.942695
Ran for 165550 frames Cell Events: 3432 mean_circ: 0.942721
Ran for 166050 frames Cell Events: 3441 mean_circ: 0.94262
Ran for 166550 frames Cell Events: 3449 mean_circ: 0.942647
Ran for 167050 frames Cell Events: 3460 mean_circ: 0.94257
Ran for 167550 frames Cell Events: 3475 mean_circ: 0.942533
Ran for 168050 frames Cell Events: 3492 mean_circ: 0.942483
Ran for 169550 frames Cell Events: 3528 mean_circ: 0.942492
Ran for 170050 frames Cell Events: 3544 mean_circ: 0.942509
Ran for 170550 frames Cell Events: 3556 mean_circ: 0.942506
Ran for 171550 frames Cell Events: 3571 mean_circ: 0.942524
Ran for 172050 frames Cell Events: 3578 mean_circ: 0.942518
Ran for 172550 frames Cell Events: 3589 mean_circ: 0.942457
Ran for 173550 frames Cell Events: 3607 mean_circ: 0.942519
Ran for 174050 frames Cell Events: 3622 mean_circ: 0.942489
Ran for 174550 frames Cell Events: 3634 mean_circ: 0.942508
Ran for 175050 frames Cell Events: 3642 mean_circ: 0.942547
Ran for 175550 frames Cell Events: 3649 mean_circ: 0.94255
Ran for 176550 frames Cell Events: 3676 mean_circ: 0.942509
Ran for 177050 frames Cell Events: 3686 mean_circ: 0.94253
Ran for 177550 frames Cell Events: 3700 mean_circ: 0.942564
Ran for 178050 frames Cell Events: 3710 mean_circ: 0.942544
Ran for 178550 frames Cell Events: 3721 mean_circ: 0.942539
Ran for 179050 frames Cell Events: 3736 mean_circ: 0.942588
Ran for 179550 frames Cell Events: 3744 mean_circ: 0.942597
Ran for 180050 frames Cell Events: 3760 mean_circ: 0.942501
Ran for 181050 frames Cell Events: 3787 mean_circ: 0.942501
Ran for 181550 frames Cell Events: 3799 mean_circ: 0.94248
Ran for 182050 frames Cell Events: 3809 mean_circ: 0.942491
Ran for 182550 frames Cell Events: 3823 mean_circ: 0.942548
Ran for 184050 frames Cell Events: 3860 mean_circ: 0.942535
Ran for 184550 frames Cell Events: 3873 mean_circ: 0.942548
Ran for 185550 frames Cell Events: 3897 mean_circ: 0.942534
Ran for 186550 frames Cell Events: 3916 mean_circ: 0.942569
Ran for 187050 frames Cell Events: 3927 mean_circ: 0.942571
Ran for 187550 frames Cell Events: 3946 mean_circ: 0.942532
Ran for 188550 frames Cell Events: 3964 mean_circ: 0.942503
Ran for 189050 frames Cell Events: 3974 mean_circ: 0.942468
Ran for 189550 frames Cell Events: 3982 mean_circ: 0.942467
Ran for 190050 frames Cell Events: 3989 mean_circ: 0.942409
Ran for 190550 frames Cell Events: 3999 mean_circ: 0.942419
Ran for 191050 frames Cell Events: 4008 mean_circ: 0.942428
Ran for 191550 frames Cell Events: 4025 mean_circ: 0.942503
Ran for 192050 frames Cell Events: 4039 mean_circ: 0.942457
Ran for 192550 frames Cell Events: 4055 mean_circ: 0.942442
Ran for 193050 frames Cell Events: 4067 mean_circ: 0.942458
Ran for 193550 frames Cell Events: 4083 mean_circ: 0.942485
Ran for 194050 frames Cell Events: 4095 mean_circ: 0.942474
Ran for 194550 frames Cell Events: 4117 mean_circ: 0.942536
Ran for 195050 frames Cell Events: 4126 mean_circ: 0.942552
Ran for 196050 frames Cell Events: 4150 mean_circ: 0.942567
Ran for 197050 frames Cell Events: 4171 mean_circ: 0.942456
Ran for 197550 frames Cell Events: 4186 mean_circ: 0.942443
Ran for 198050 frames Cell Events: 4198 mean_circ: 0.942473
Ran for 198550 frames Cell Events: 4210 mean_circ: 0.94249
Ran for 199050 frames Cell Events: 4221 mean_circ: 0.942453
Ran for 199550 frames Cell Events: 4237 mean_circ: 0.942483
Ran for 200050 frames Cell Events: 4248 mean_circ: 0.942478
Ran for 200550 frames Cell Events: 4258 mean_circ: 0.942459
Ran for 201050 frames Cell Events: 4267 mean_circ: 0.942476
Ran for 201550 frames Cell Events: 4284 mean_circ: 0.942465
Ran for 202050 frames Cell Events: 4295 mean_circ: 0.942362
Ran for 202550 frames Cell Events: 4313 mean_circ: 0.942348
Ran for 203050 frames Cell Events: 4321 mean_circ: 0.942344
Ran for 204050 frames Cell Events: 4341 mean_circ: 0.942338
Ran for 204550 frames Cell Events: 4358 mean_circ: 0.942348
Ran for 205050 frames Cell Events: 4372 mean_circ: 0.942329
Ran for 205550 frames Cell Events: 4383 mean_circ: 0.942352
Ran for 206050 frames Cell Events: 4393 mean_circ: 0.942348
Ran for 206550 frames Cell Events: 4409 mean_circ: 0.942396
Ran for 207050 frames Cell Events: 4420 mean_circ: 0.942319
Ran for 208050 frames Cell Events: 4434 mean_circ: 0.942278
Ran for 209050 frames Cell Events: 4462 mean_circ: 0.942325
Ran for 209550 frames Cell Events: 4473 mean_circ: 0.942319
Ran for 210050 frames Cell Events: 4482 mean_circ: 0.942302
Ran for 211050 frames Cell Events: 4499 mean_circ: 0.942369
Ran for 211550 frames Cell Events: 4510 mean_circ: 0.942359
Ran for 212050 frames Cell Events: 4521 mean_circ: 0.942379
Ran for 212550 frames Cell Events: 4534 mean_circ: 0.94242
Ran for 213550 frames Cell Events: 4561 mean_circ: 0.942454
Ran for 214550 frames Cell Events: 4584 mean_circ: 0.942458
Ran for 215050 frames Cell Events: 4598 mean_circ: 0.942436
Ran for 215550 frames Cell Events: 4605 mean_circ: 0.942442
Ran for 216050 frames Cell Events: 4620 mean_circ: 0.942451
Ran for 217050 frames Cell Events: 4646 mean_circ: 0.94244
Ran for 217550 frames Cell Events: 4663 mean_circ: 0.942495
Ran for 218050 frames Cell Events: 4677 mean_circ: 0.942465
Ran for 218550 frames Cell Events: 4688 mean_circ: 0.942477
Ran for 219050 frames Cell Events: 4705 mean_circ: 0.942489
Ran for 220050 frames Cell Events: 4743 mean_circ: 0.942474
Ran for 220550 frames Cell Events: 4760 mean_circ: 0.942487
Ran for 221050 frames Cell Events: 4767 mean_circ: 0.942503
Ran for 221550 frames Cell Events: 4775 mean_circ: 0.942491
Ran for 222050 frames Cell Events: 4787 mean_circ: 0.942534
Ran for 222550 frames Cell Events: 4805 mean_circ: 0.942526
Ran for 223050 frames Cell Events: 4819 mean_circ: 0.942507
Ran for 224050 frames Cell Events: 4843 mean_circ: 0.942539
Ran for 224550 frames Cell Events: 4855 mean_circ: 0.942555
Ran for 225050 frames Cell Events: 4865 mean_circ: 0.942558
Ran for 225550 frames Cell Events: 4875 mean_circ: 0.942566
Ran for 226050 frames Cell Events: 4885 mean_circ: 0.942585
Ran for 226550 frames Cell Events: 4897 mean_circ: 0.942571
Ran for 227050 frames Cell Events: 4911 mean_circ: 0.942607
Ran for 227550 frames Cell Events: 4922 mean_circ: 0.942588
Ran for 228050 frames Cell Events: 4932 mean_circ: 0.942611
Ran for 229050 frames Cell Events: 4960 mean_circ: 0.942653
Ran for 229550 frames Cell Events: 4978 mean_circ: 0.942707
Ran for 230050 frames Cell Events: 4989 mean_circ: 0.942708
Ran for 231050 frames Cell Events: 5022 mean_circ: 0.942716
Ran for 231550 frames Cell Events: 5035 mean_circ: 0.942695
Ran for 232050 frames Cell Events: 5049 mean_circ: 0.942695
Ran for 232550 frames Cell Events: 5066 mean_circ: 0.942679
Ran for 233050 frames Cell Events: 5081 mean_circ: 0.942706
Ran for 234050 frames Cell Events: 5105 mean_circ: 0.942735
Ran for 234550 frames Cell Events: 5122 mean_circ: 0.942783
Ran for 235050 frames Cell Events: 5135 mean_circ: 0.942809
Ran for 235550 frames Cell Events: 5153 mean_circ: 0.942846
Ran for 236050 frames Cell Events: 5166 mean_circ: 0.942843
Ran for 237050 frames Cell Events: 5194 mean_circ: 0.942827
Ran for 238050 frames Cell Events: 5224 mean_circ: 0.942903
Ran for 239050 frames Cell Events: 5263 mean_circ: 0.942948
Ran for 239550 frames Cell Events: 5278 mean_circ: 0.942945
Ran for 240050 frames Cell Events: 5283 mean_circ: 0.942965
Ran for 240550 frames Cell Events: 5308 mean_circ: 0.943027
Ran for 241050 frames Cell Events: 5323 mean_circ: 0.943059
Ran for 241550 frames Cell Events: 5332 mean_circ: 0.943057
Ran for 242050 frames Cell Events: 5345 mean_circ: 0.943037
Ran for 243050 frames Cell Events: 5375 mean_circ: 0.943082
Ran for 244050 frames Cell Events: 5406 mean_circ: 0.943085
Ran for 244550 frames Cell Events: 5416 mean_circ: 0.943051
Ran for 245550 frames Cell Events: 5452 mean_circ: 0.943017
Ran for 246050 frames Cell Events: 5483 mean_circ: 0.943062
Ran for 246550 frames Cell Events: 5494 mean_circ: 0.943004
Ran for 247050 frames Cell Events: 5505 mean_circ: 0.943019
Ran for 247550 frames Cell Events: 5517 mean_circ: 0.943018
Ran for 248050 frames Cell Events: 5532 mean_circ: 0.943001
Ran for 248550 frames Cell Events: 5548 mean_circ: 0.942968
Ran for 249050 frames Cell Events: 5554 mean_circ: 0.942985
Ran for 249550 frames Cell Events: 5563 mean_circ: 0.942983
Ran for 251550 frames Cell Events: 5605 mean_circ: 0.942994
Ran for 252050 frames Cell Events: 5621 mean_circ: 0.942999
Ran for 253050 frames Cell Events: 5650 mean_circ: 0.943044
Ran for 253550 frames Cell Events: 5672 mean_circ: 0.943061
Ran for 254550 frames Cell Events: 5716 mean_circ: 0.943062
Ran for 256550 frames Cell Events: 5770 mean_circ: 0.943083
Ran for 257550 frames Cell Events: 5796 mean_circ: 0.943061
Ran for 258050 frames Cell Events: 5805 mean_circ: 0.943061
Ran for 258550 frames Cell Events: 5815 mean_circ: 0.943071
Ran for 259550 frames Cell Events: 5854 mean_circ: 0.943035
Ran for 260050 frames Cell Events: 5869 mean_circ: 0.943049
Ran for 260550 frames Cell Events: 5887 mean_circ: 0.943013
Ran for 261050 frames Cell Events: 5899 mean_circ: 0.942983
Ran for 261550 frames Cell Events: 5913 mean_circ: 0.942984
Ran for 262050 frames Cell Events: 5928 mean_circ: 0.942926
Ran for 262550 frames Cell Events: 5940 mean_circ: 0.942933
Ran for 263550 frames Cell Events: 5972 mean_circ: 0.942847
Ran for 264550 frames Cell Events: 5998 mean_circ: 0.942817
Ran for 265050 frames Cell Events: 6010 mean_circ: 0.942825
Ran for 265550 frames Cell Events: 6027 mean_circ: 0.942858
Ran for 266050 frames Cell Events: 6035 mean_circ: 0.942882
Ran for 266550 frames Cell Events: 6049 mean_circ: 0.94288
Ran for 267050 frames Cell Events: 6058 mean_circ: 0.942864
Ran for 267550 frames Cell Events: 6068 mean_circ: 0.942823
Ran for 268050 frames Cell Events: 6083 mean_circ: 0.942762
Ran for 268550 frames Cell Events: 6097 mean_circ: 0.942749
Ran for 269550 frames Cell Events: 6127 mean_circ: 0.942759
Ran for 270550 frames Cell Events: 6153 mean_circ: 0.942798
Ran for 271550 frames Cell Events: 6188 mean_circ: 0.942707
Ran for 272050 frames Cell Events: 6202 mean_circ: 0.942719
Ran for 273550 frames Cell Events: 6252 mean_circ: 0.94268
Ran for 274050 frames Cell Events: 6262 mean_circ: 0.942677
Ran for 275050 frames Cell Events: 6289 mean_circ: 0.942685
Ran for 275550 frames Cell Events: 6299 mean_circ: 0.942683
Ran for 276050 frames Cell Events: 6315 mean_circ: 0.942646
Ran for 276550 frames Cell Events: 6324 mean_circ: 0.942667
Ran for 277550 frames Cell Events: 6358 mean_circ: 0.942692
Ran for 278050 frames Cell Events: 6374 mean_circ: 0.942715
Ran for 278550 frames Cell Events: 6389 mean_circ: 0.942716
Ran for 279050 frames Cell Events: 6401 mean_circ: 0.942723
Ran for 279550 frames Cell Events: 6416 mean_circ: 0.942702
Ran for 280050 frames Cell Events: 6430 mean_circ: 0.942696
Ran for 281050 frames Cell Events: 6453 mean_circ: 0.942705
Ran for 281550 frames Cell Events: 6471 mean_circ: 0.942695
Ran for 282550 frames Cell Events: 6497 mean_circ: 0.942681
Ran for 283550 frames Cell Events: 6533 mean_circ: 0.942713
Ran for 284050 frames Cell Events: 6550 mean_circ: 0.942718
Ran for 284550 frames Cell Events: 6565 mean_circ: 0.942738
Ran for 285050 frames Cell Events: 6581 mean_circ: 0.94275
Ran for 285550 frames Cell Events: 6595 mean_circ: 0.942777
Ran for 286050 frames Cell Events: 6605 mean_circ: 0.942776
Ran for 287050 frames Cell Events: 6635 mean_circ: 0.942737
Ran for 288050 frames Cell Events: 6667 mean_circ: 0.942734
Ran for 288550 frames Cell Events: 6678 mean_circ: 0.942734
Ran for 289050 frames Cell Events: 6692 mean_circ: 0.94277
Ran for 289550 frames Cell Events: 6705 mean_circ: 0.942811
Ran for 290050 frames Cell Events: 6715 mean_circ: 0.942748
Ran for 290550 frames Cell Events: 6728 mean_circ: 0.942733
Ran for 291050 frames Cell Events: 6738 mean_circ: 0.942738
Ran for 291550 frames Cell Events: 6755 mean_circ: 0.942744
Ran for 292050 frames Cell Events: 6774 mean_circ: 0.942687
Ran for 292550 frames Cell Events: 6784 mean_circ: 0.942698
Ran for 293050 frames Cell Events: 6790 mean_circ: 0.942702
Ran for 293550 frames Cell Events: 6803 mean_circ: 0.942683
Ran for 294050 frames Cell Events: 6817 mean_circ: 0.942701
Ran for 294550 frames Cell Events: 6833 mean_circ: 0.942698
Ran for 295050 frames Cell Events: 6846 mean_circ: 0.942737
Ran for 295550 frames Cell Events: 6857 mean_circ: 0.94273
Ran for 296050 frames Cell Events: 6875 mean_circ: 0.942742
Ran for 297550 frames Cell Events: 6916 mean_circ: 0.94279
Ran for 298550 frames Cell Events: 6946 mean_circ: 0.942781
Ran for 299550 frames Cell Events: 6980 mean_circ: 0.942808
Ran for 300050 frames Cell Events: 6995 mean_circ: 0.942823
Ran for 300550 frames Cell Events: 7017 mean_circ: 0.942778
Ran for 301050 frames Cell Events: 7026 mean_circ: 0.942787
Ran for 302050 frames Cell Events: 7054 mean_circ: 0.942752
Ran for 302550 frames Cell Events: 7064 mean_circ: 0.94275
Ran for 303050 frames Cell Events: 7072 mean_circ: 0.942756
Ran for 304050 frames Cell Events: 7081 mean_circ: 0.942765
Ran for 304550 frames Cell Events: 7094 mean_circ: 0.94277
Ran for 305050 frames Cell Events: 7101 mean_circ: 0.942768
Ran for 306050 frames Cell Events: 7125 mean_circ: 0.942807
Ran for 306550 frames Cell Events: 7141 mean_circ: 0.942842
Ran for 307050 frames Cell Events: 7149 mean_circ: 0.942859
Ran for 308050 frames Cell Events: 7176 mean_circ: 0.942883
Ran for 309050 frames Cell Events: 7211 mean_circ: 0.942829
Ran for 309550 frames Cell Events: 7222 mean_circ: 0.94285
Ran for 310050 frames Cell Events: 7230 mean_circ: 0.94285
Ran for 311050 frames Cell Events: 7254 mean_circ: 0.942914
Ran for 311550 frames Cell Events: 7266 mean_circ: 0.942896
Ran for 312050 frames Cell Events: 7275 mean_circ: 0.942873
Ran for 312550 frames Cell Events: 7290 mean_circ: 0.942877
Ran for 313550 frames Cell Events: 7310 mean_circ: 0.942866
Ran for 314050 frames Cell Events: 7321 mean_circ: 0.942878
Ran for 314550 frames Cell Events: 7331 mean_circ: 0.942863
Ran for 315050 frames Cell Events: 7343 mean_circ: 0.942833
Ran for 315550 frames Cell Events: 7353 mean_circ: 0.94284
Ran for 316050 frames Cell Events: 7370 mean_circ: 0.942836
Ran for 316550 frames Cell Events: 7378 mean_circ: 0.94283
Ran for 318050 frames Cell Events: 7410 mean_circ: 0.942834
Ran for 319050 frames Cell Events: 7432 mean_circ: 0.942824
Ran for 319550 frames Cell Events: 7448 mean_circ: 0.942798
Ran for 320050 frames Cell Events: 7455 mean_circ: 0.9428
Ran for 320550 frames Cell Events: 7470 mean_circ: 0.942788
Ran for 321050 frames Cell Events: 7480 mean_circ: 0.942795
Ran for 323050 frames Cell Events: 7528 mean_circ: 0.942765
Ran for 324050 frames Cell Events: 7564 mean_circ: 0.942789
Ran for 325050 frames Cell Events: 7590 mean_circ: 0.94281
Ran for 326050 frames Cell Events: 7622 mean_circ: 0.942819
Ran for 327050 frames Cell Events: 7653 mean_circ: 0.942821
Ran for 328550 frames Cell Events: 7677 mean_circ: 0.942847
Ran for 329050 frames Cell Events: 7687 mean_circ: 0.94287
Ran for 331050 frames Cell Events: 7745 mean_circ: 0.942848
Ran for 331550 frames Cell Events: 7759 mean_circ: 0.942867
Ran for 332050 frames Cell Events: 7773 mean_circ: 0.942823
Ran for 332550 frames Cell Events: 7787 mean_circ: 0.942826
Ran for 333050 frames Cell Events: 7802 mean_circ: 0.942802
Ran for 333550 frames Cell Events: 7820 mean_circ: 0.942825
Ran for 334050 frames Cell Events: 7831 mean_circ: 0.942832
Ran for 334550 frames Cell Events: 7846 mean_circ: 0.942864
Ran for 335550 frames Cell Events: 7875 mean_circ: 0.942866
Ran for 336050 frames Cell Events: 7881 mean_circ: 0.942872
Ran for 336550 frames Cell Events: 7892 mean_circ: 0.942879
Ran for 337050 frames Cell Events: 7904 mean_circ: 0.942892
Ran for 337550 frames Cell Events: 7922 mean_circ: 0.942899
Ran for 338050 frames Cell Events: 7936 mean_circ: 0.942936
Ran for 338550 frames Cell Events: 7948 mean_circ: 0.942957
Ran for 339050 frames Cell Events: 7967 mean_circ: 0.94298
Ran for 339550 frames Cell Events: 7977 mean_circ: 0.942966
Ran for 340050 frames Cell Events: 7993 mean_circ: 0.942973
Ran for 340550 frames Cell Events: 7999 mean_circ: 0.942957
Ran for 341050 frames Cell Events: 8016 mean_circ: 0.942953
Ran for 341550 frames Cell Events: 8033 mean_circ: 0.94294
End this measurment..
Stopping time: 1.83771e+009
****************************************
Measurement finished
Mean Circularitiy: 0.942955
Mean Area: 630.098
Mean FL-1 intensity: 3282.23
Mean FL-2 intensity: 3988.34
Mean FL-3 intensity: 0
frames processed: 339465
Total Time: 170945ms
Number of Runs (new bg img) 0
Frames collected: 341712
Skipped frames: 8112
Rescued Frames: 571228
Samples DAQ: 85429896
Samples written: 170856136
Samples per Channel: 85428068
FPS: 1998.96
Samples per second: 499741
Expected samples/s: 500000
Events: 8035
Events per second: 47.0035
jumped back (PMT): 5714
#Frames read, frequency
# 0 frames :460332
# 1 frames :201524
# 2 frames :6200
# 3 frames :2479
# 4 frames :1443
# 5 frames :765
# 6 frames :1478
# 7 frames :1959
# 8 frames :1634
# 9 frames :945
# 10 frames :862
# 11 frames :688
# 12 frames :708
# 13 frames :481
# 14 frames :370
# 15 frames :300
# 16 frames :235
# 17 frames :220
# 18 frames :179
# 19 frames :149
# 20 frames :109
# 21 frames :60
# 22 frames :36
# 23 frames :32
# 24 frames :27
# 25 frames :20
# 26 frames :20
# 27 frames :19
# 28 frames :16
# 29 frames :22
# 30 frames :12
# 31 frames :7
# 32 frames :4
# 33 frames :7
# 34 frames :5
# 35 frames :5
# 36 frames :1
# 37 frames :2
# 38 frames :2
# 39 frames :1
# 40 frames :1
# 41 frames :1
# 43 frames :3
# 44 frames :2
# 45 frames :1
# 46 frames :1
# 49 frames :1
# 53 frames :1
# 58 frames :1
# 71 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.4613
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0