Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.17.04
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "c2e38aac6299037df5d84acd146b0a0c",
"name": "M1_20170605_1618_dsRNA_J3_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:17:28"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6647
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.84293e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 24 mean_circ: 0.924707
Ran for 1050 frames Cell Events: 48 mean_circ: 0.930371
Ran for 1550 frames Cell Events: 62 mean_circ: 0.926828
Ran for 2050 frames Cell Events: 81 mean_circ: 0.929744
Ran for 4050 frames Cell Events: 137 mean_circ: 0.931857
Ran for 5550 frames Cell Events: 162 mean_circ: 0.932813
Ran for 6550 frames Cell Events: 201 mean_circ: 0.933647
Ran for 8050 frames Cell Events: 260 mean_circ: 0.931004
Ran for 8550 frames Cell Events: 274 mean_circ: 0.930387
Ran for 9050 frames Cell Events: 292 mean_circ: 0.931195
Ran for 10050 frames Cell Events: 335 mean_circ: 0.933096
Ran for 10550 frames Cell Events: 357 mean_circ: 0.932899
Ran for 11550 frames Cell Events: 398 mean_circ: 0.933257
Ran for 12050 frames Cell Events: 412 mean_circ: 0.933611
Ran for 12550 frames Cell Events: 434 mean_circ: 0.934053
Ran for 13550 frames Cell Events: 464 mean_circ: 0.934458
Ran for 14050 frames Cell Events: 484 mean_circ: 0.934233
Ran for 15050 frames Cell Events: 518 mean_circ: 0.934332
Ran for 16050 frames Cell Events: 555 mean_circ: 0.935344
Ran for 16550 frames Cell Events: 577 mean_circ: 0.935431
Ran for 17050 frames Cell Events: 594 mean_circ: 0.935317
Ran for 18050 frames Cell Events: 620 mean_circ: 0.935745
Ran for 19050 frames Cell Events: 658 mean_circ: 0.935928
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Ran for 20050 frames Cell Events: 696 mean_circ: 0.935269
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Ran for 24050 frames Cell Events: 865 mean_circ: 0.934523
Ran for 24550 frames Cell Events: 879 mean_circ: 0.934538
Ran for 25550 frames Cell Events: 932 mean_circ: 0.934392
Ran for 26550 frames Cell Events: 970 mean_circ: 0.934223
Ran for 28050 frames Cell Events: 1032 mean_circ: 0.933988
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Ran for 33050 frames Cell Events: 1211 mean_circ: 0.935003
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Ran for 34050 frames Cell Events: 1251 mean_circ: 0.934818
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Ran for 36050 frames Cell Events: 1341 mean_circ: 0.934483
Ran for 37050 frames Cell Events: 1404 mean_circ: 0.934447
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Ran for 38550 frames Cell Events: 1465 mean_circ: 0.934772
Ran for 39050 frames Cell Events: 1479 mean_circ: 0.934967
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Ran for 40550 frames Cell Events: 1532 mean_circ: 0.934454
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Ran for 42550 frames Cell Events: 1616 mean_circ: 0.934302
Ran for 43050 frames Cell Events: 1634 mean_circ: 0.934194
Ran for 43550 frames Cell Events: 1650 mean_circ: 0.934275
Ran for 44050 frames Cell Events: 1673 mean_circ: 0.934275
Ran for 44550 frames Cell Events: 1687 mean_circ: 0.934417
Ran for 45550 frames Cell Events: 1731 mean_circ: 0.934281
Ran for 46050 frames Cell Events: 1766 mean_circ: 0.934249
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Ran for 47050 frames Cell Events: 1805 mean_circ: 0.934396
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Ran for 50050 frames Cell Events: 1923 mean_circ: 0.934431
Ran for 51050 frames Cell Events: 1973 mean_circ: 0.93446
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Ran for 53050 frames Cell Events: 2071 mean_circ: 0.934432
Ran for 53550 frames Cell Events: 2090 mean_circ: 0.934379
Ran for 54050 frames Cell Events: 2111 mean_circ: 0.934313
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Ran for 56550 frames Cell Events: 2202 mean_circ: 0.934589
Ran for 57050 frames Cell Events: 2223 mean_circ: 0.93459
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Ran for 63550 frames Cell Events: 2493 mean_circ: 0.934697
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Ran for 65050 frames Cell Events: 2566 mean_circ: 0.934579
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Ran for 66050 frames Cell Events: 2603 mean_circ: 0.934576
Ran for 66550 frames Cell Events: 2623 mean_circ: 0.934473
Ran for 67550 frames Cell Events: 2657 mean_circ: 0.934547
Ran for 68050 frames Cell Events: 2675 mean_circ: 0.934594
Ran for 68550 frames Cell Events: 2688 mean_circ: 0.934582
Ran for 69050 frames Cell Events: 2709 mean_circ: 0.934656
Ran for 69550 frames Cell Events: 2730 mean_circ: 0.934464
Ran for 70050 frames Cell Events: 2745 mean_circ: 0.93444
Ran for 70550 frames Cell Events: 2768 mean_circ: 0.934345
Ran for 71550 frames Cell Events: 2804 mean_circ: 0.934333
Ran for 72050 frames Cell Events: 2829 mean_circ: 0.934099
Ran for 72550 frames Cell Events: 2850 mean_circ: 0.934011
Ran for 73050 frames Cell Events: 2874 mean_circ: 0.933934
Ran for 73550 frames Cell Events: 2898 mean_circ: 0.933875
Ran for 74550 frames Cell Events: 2948 mean_circ: 0.933829
Ran for 75050 frames Cell Events: 2966 mean_circ: 0.933824
Ran for 76050 frames Cell Events: 3008 mean_circ: 0.933797
Ran for 76550 frames Cell Events: 3039 mean_circ: 0.933806
Ran for 77050 frames Cell Events: 3061 mean_circ: 0.933832
Ran for 77550 frames Cell Events: 3090 mean_circ: 0.933794
Ran for 78050 frames Cell Events: 3118 mean_circ: 0.933965
Ran for 79550 frames Cell Events: 3176 mean_circ: 0.933872
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Ran for 80550 frames Cell Events: 3209 mean_circ: 0.933888
Ran for 81050 frames Cell Events: 3222 mean_circ: 0.93393
Ran for 82050 frames Cell Events: 3263 mean_circ: 0.934007
Ran for 82550 frames Cell Events: 3277 mean_circ: 0.93392
Ran for 83050 frames Cell Events: 3299 mean_circ: 0.9339
Ran for 83550 frames Cell Events: 3317 mean_circ: 0.933927
Ran for 84050 frames Cell Events: 3324 mean_circ: 0.933953
Ran for 84550 frames Cell Events: 3344 mean_circ: 0.933919
Ran for 85050 frames Cell Events: 3358 mean_circ: 0.933962
Ran for 85550 frames Cell Events: 3378 mean_circ: 0.93401
Ran for 86050 frames Cell Events: 3393 mean_circ: 0.934094
Ran for 86550 frames Cell Events: 3415 mean_circ: 0.934088
Ran for 87050 frames Cell Events: 3433 mean_circ: 0.934164
Ran for 87550 frames Cell Events: 3448 mean_circ: 0.934004
Ran for 88050 frames Cell Events: 3465 mean_circ: 0.933945
Ran for 88550 frames Cell Events: 3482 mean_circ: 0.933827
Ran for 89550 frames Cell Events: 3512 mean_circ: 0.93389
Ran for 90050 frames Cell Events: 3537 mean_circ: 0.933924
Ran for 90550 frames Cell Events: 3562 mean_circ: 0.933914
Ran for 91050 frames Cell Events: 3586 mean_circ: 0.933965
Ran for 91550 frames Cell Events: 3604 mean_circ: 0.933968
Ran for 93050 frames Cell Events: 3664 mean_circ: 0.933927
Ran for 95550 frames Cell Events: 3766 mean_circ: 0.933929
Ran for 96050 frames Cell Events: 3787 mean_circ: 0.934004
Ran for 96550 frames Cell Events: 3807 mean_circ: 0.934054
Ran for 97550 frames Cell Events: 3841 mean_circ: 0.934121
Ran for 98550 frames Cell Events: 3879 mean_circ: 0.934167
Ran for 99050 frames Cell Events: 3903 mean_circ: 0.934162
Ran for 100050 frames Cell Events: 3946 mean_circ: 0.934154
Ran for 100550 frames Cell Events: 3968 mean_circ: 0.934135
Ran for 102050 frames Cell Events: 4033 mean_circ: 0.934095
Ran for 103550 frames Cell Events: 4112 mean_circ: 0.934189
Ran for 104050 frames Cell Events: 4127 mean_circ: 0.934235
Ran for 104550 frames Cell Events: 4153 mean_circ: 0.934181
Ran for 105050 frames Cell Events: 4178 mean_circ: 0.93411
Ran for 106050 frames Cell Events: 4227 mean_circ: 0.934182
Ran for 106550 frames Cell Events: 4250 mean_circ: 0.934154
Ran for 107550 frames Cell Events: 4302 mean_circ: 0.934044
Ran for 108050 frames Cell Events: 4322 mean_circ: 0.934087
Ran for 108550 frames Cell Events: 4346 mean_circ: 0.934101
Ran for 109050 frames Cell Events: 4370 mean_circ: 0.934117
Ran for 109550 frames Cell Events: 4394 mean_circ: 0.934093
Ran for 110050 frames Cell Events: 4413 mean_circ: 0.934114
Ran for 111550 frames Cell Events: 4482 mean_circ: 0.933838
Ran for 112550 frames Cell Events: 4528 mean_circ: 0.93387
Ran for 113050 frames Cell Events: 4550 mean_circ: 0.933792
Ran for 113550 frames Cell Events: 4574 mean_circ: 0.933778
Ran for 114050 frames Cell Events: 4591 mean_circ: 0.933766
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Ran for 115050 frames Cell Events: 4630 mean_circ: 0.933743
Ran for 115550 frames Cell Events: 4644 mean_circ: 0.933763
Ran for 116050 frames Cell Events: 4661 mean_circ: 0.933763
Ran for 116550 frames Cell Events: 4683 mean_circ: 0.933767
Ran for 118050 frames Cell Events: 4741 mean_circ: 0.933703
Ran for 118550 frames Cell Events: 4766 mean_circ: 0.933697
Ran for 119550 frames Cell Events: 4811 mean_circ: 0.933696
Ran for 120050 frames Cell Events: 4830 mean_circ: 0.933657
Ran for 121050 frames Cell Events: 4868 mean_circ: 0.933592
Ran for 122050 frames Cell Events: 4911 mean_circ: 0.933599
Ran for 123050 frames Cell Events: 4953 mean_circ: 0.933593
Ran for 124050 frames Cell Events: 4988 mean_circ: 0.933494
Ran for 124550 frames Cell Events: 5009 mean_circ: 0.933447
Ran for 125550 frames Cell Events: 5045 mean_circ: 0.933465
Ran for 126550 frames Cell Events: 5061 mean_circ: 0.933462
Ran for 127050 frames Cell Events: 5084 mean_circ: 0.933485
Ran for 127550 frames Cell Events: 5107 mean_circ: 0.933497
Ran for 128550 frames Cell Events: 5163 mean_circ: 0.933411
Ran for 129550 frames Cell Events: 5208 mean_circ: 0.933408
Ran for 130050 frames Cell Events: 5227 mean_circ: 0.933419
Ran for 130550 frames Cell Events: 5249 mean_circ: 0.93346
Ran for 131050 frames Cell Events: 5266 mean_circ: 0.933433
Ran for 131550 frames Cell Events: 5280 mean_circ: 0.933416
Ran for 132550 frames Cell Events: 5338 mean_circ: 0.933446
Ran for 134550 frames Cell Events: 5410 mean_circ: 0.933309
Ran for 135050 frames Cell Events: 5427 mean_circ: 0.933261
Ran for 136050 frames Cell Events: 5470 mean_circ: 0.93322
Ran for 136550 frames Cell Events: 5499 mean_circ: 0.933186
Ran for 138550 frames Cell Events: 5594 mean_circ: 0.933213
Ran for 139050 frames Cell Events: 5611 mean_circ: 0.933185
Ran for 139550 frames Cell Events: 5632 mean_circ: 0.933173
Ran for 140050 frames Cell Events: 5649 mean_circ: 0.933189
Ran for 140550 frames Cell Events: 5669 mean_circ: 0.933217
Ran for 141050 frames Cell Events: 5689 mean_circ: 0.933238
Ran for 143550 frames Cell Events: 5791 mean_circ: 0.9333
Ran for 144050 frames Cell Events: 5822 mean_circ: 0.93336
Ran for 145050 frames Cell Events: 5863 mean_circ: 0.933385
Ran for 146050 frames Cell Events: 5904 mean_circ: 0.933392
Ran for 147050 frames Cell Events: 5931 mean_circ: 0.933345
Ran for 147550 frames Cell Events: 5947 mean_circ: 0.93335
Ran for 148050 frames Cell Events: 5968 mean_circ: 0.933339
Ran for 149550 frames Cell Events: 6021 mean_circ: 0.933345
Ran for 150550 frames Cell Events: 6076 mean_circ: 0.933407
Ran for 151050 frames Cell Events: 6093 mean_circ: 0.933397
Ran for 152050 frames Cell Events: 6132 mean_circ: 0.933376
Ran for 152550 frames Cell Events: 6145 mean_circ: 0.933352
Ran for 153550 frames Cell Events: 6180 mean_circ: 0.933372
Ran for 154550 frames Cell Events: 6218 mean_circ: 0.933437
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Ran for 156050 frames Cell Events: 6274 mean_circ: 0.933476
Ran for 157050 frames Cell Events: 6306 mean_circ: 0.933531
Ran for 157550 frames Cell Events: 6331 mean_circ: 0.93357
Ran for 158050 frames Cell Events: 6352 mean_circ: 0.933635
Ran for 158550 frames Cell Events: 6366 mean_circ: 0.933628
Ran for 159050 frames Cell Events: 6390 mean_circ: 0.93364
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Ran for 160550 frames Cell Events: 6463 mean_circ: 0.93365
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Ran for 162050 frames Cell Events: 6511 mean_circ: 0.933625
Ran for 162550 frames Cell Events: 6533 mean_circ: 0.933627
Ran for 163050 frames Cell Events: 6555 mean_circ: 0.933637
Ran for 164050 frames Cell Events: 6588 mean_circ: 0.933621
Ran for 164550 frames Cell Events: 6605 mean_circ: 0.933634
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Ran for 168550 frames Cell Events: 6759 mean_circ: 0.933656
Ran for 169050 frames Cell Events: 6774 mean_circ: 0.933675
Ran for 169550 frames Cell Events: 6792 mean_circ: 0.933645
Ran for 170050 frames Cell Events: 6816 mean_circ: 0.933613
Ran for 170550 frames Cell Events: 6832 mean_circ: 0.933648
Ran for 171050 frames Cell Events: 6852 mean_circ: 0.933655
Ran for 171550 frames Cell Events: 6865 mean_circ: 0.933635
Ran for 172050 frames Cell Events: 6893 mean_circ: 0.933628
Ran for 172550 frames Cell Events: 6903 mean_circ: 0.933658
Ran for 173050 frames Cell Events: 6918 mean_circ: 0.933609
Ran for 174050 frames Cell Events: 6963 mean_circ: 0.93358
Ran for 174550 frames Cell Events: 6979 mean_circ: 0.933538
Ran for 175550 frames Cell Events: 7022 mean_circ: 0.933542
Ran for 176550 frames Cell Events: 7062 mean_circ: 0.93357
Ran for 177050 frames Cell Events: 7083 mean_circ: 0.933555
Ran for 177550 frames Cell Events: 7106 mean_circ: 0.933545
Ran for 178050 frames Cell Events: 7120 mean_circ: 0.933552
Ran for 179050 frames Cell Events: 7161 mean_circ: 0.933583
Ran for 179550 frames Cell Events: 7185 mean_circ: 0.933524
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Ran for 180550 frames Cell Events: 7220 mean_circ: 0.933538
Ran for 181050 frames Cell Events: 7244 mean_circ: 0.933556
Ran for 181550 frames Cell Events: 7260 mean_circ: 0.933565
Ran for 182050 frames Cell Events: 7283 mean_circ: 0.933545
Ran for 182550 frames Cell Events: 7297 mean_circ: 0.933561
Ran for 183050 frames Cell Events: 7315 mean_circ: 0.933571
Ran for 183550 frames Cell Events: 7337 mean_circ: 0.933555
Ran for 184550 frames Cell Events: 7390 mean_circ: 0.933502
Ran for 185550 frames Cell Events: 7443 mean_circ: 0.933561
Ran for 187550 frames Cell Events: 7525 mean_circ: 0.933649
Ran for 188050 frames Cell Events: 7544 mean_circ: 0.933656
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Ran for 190050 frames Cell Events: 7634 mean_circ: 0.933565
Ran for 190550 frames Cell Events: 7651 mean_circ: 0.933534
Ran for 191050 frames Cell Events: 7677 mean_circ: 0.933563
Ran for 191550 frames Cell Events: 7697 mean_circ: 0.933592
Ran for 192550 frames Cell Events: 7745 mean_circ: 0.93361
Ran for 193050 frames Cell Events: 7767 mean_circ: 0.933541
Ran for 193550 frames Cell Events: 7778 mean_circ: 0.933578
Ran for 194050 frames Cell Events: 7795 mean_circ: 0.93358
Ran for 195050 frames Cell Events: 7847 mean_circ: 0.933501
Ran for 196050 frames Cell Events: 7900 mean_circ: 0.933484
Ran for 196550 frames Cell Events: 7924 mean_circ: 0.933484
Ran for 197050 frames Cell Events: 7939 mean_circ: 0.933487
Ran for 197550 frames Cell Events: 7955 mean_circ: 0.933443
Ran for 198050 frames Cell Events: 7978 mean_circ: 0.933417
Ran for 198550 frames Cell Events: 7998 mean_circ: 0.933448
Ran for 199050 frames Cell Events: 8018 mean_circ: 0.933479
Ran for 199550 frames Cell Events: 8037 mean_circ: 0.933447
Ran for 200550 frames Cell Events: 8081 mean_circ: 0.933498
Ran for 201050 frames Cell Events: 8099 mean_circ: 0.933528
Ran for 202550 frames Cell Events: 8156 mean_circ: 0.933536
Ran for 203550 frames Cell Events: 8197 mean_circ: 0.933534
Ran for 204050 frames Cell Events: 8221 mean_circ: 0.933584
Ran for 204550 frames Cell Events: 8242 mean_circ: 0.933591
Ran for 205050 frames Cell Events: 8262 mean_circ: 0.933586
Ran for 205550 frames Cell Events: 8283 mean_circ: 0.933613
Ran for 206050 frames Cell Events: 8305 mean_circ: 0.933615
Ran for 207050 frames Cell Events: 8336 mean_circ: 0.933589
Ran for 207550 frames Cell Events: 8359 mean_circ: 0.933602
Ran for 208050 frames Cell Events: 8382 mean_circ: 0.933587
Ran for 209050 frames Cell Events: 8426 mean_circ: 0.933602
Ran for 210050 frames Cell Events: 8459 mean_circ: 0.933641
Ran for 210550 frames Cell Events: 8478 mean_circ: 0.933635
Ran for 212550 frames Cell Events: 8572 mean_circ: 0.933612
Ran for 213550 frames Cell Events: 8611 mean_circ: 0.933621
Ran for 214050 frames Cell Events: 8638 mean_circ: 0.933625
Ran for 214550 frames Cell Events: 8665 mean_circ: 0.933587
Ran for 215050 frames Cell Events: 8693 mean_circ: 0.933582
Ran for 216050 frames Cell Events: 8736 mean_circ: 0.933542
Ran for 216550 frames Cell Events: 8760 mean_circ: 0.933515
Ran for 218050 frames Cell Events: 8838 mean_circ: 0.933453
Ran for 219050 frames Cell Events: 8873 mean_circ: 0.933479
Ran for 219550 frames Cell Events: 8887 mean_circ: 0.933483
Ran for 220050 frames Cell Events: 8908 mean_circ: 0.933479
Ran for 220550 frames Cell Events: 8926 mean_circ: 0.933426
Ran for 221050 frames Cell Events: 8943 mean_circ: 0.933414
Ran for 221550 frames Cell Events: 8961 mean_circ: 0.933395
Ran for 222050 frames Cell Events: 8978 mean_circ: 0.93342
Ran for 223050 frames Cell Events: 9020 mean_circ: 0.933426
Ran for 223550 frames Cell Events: 9040 mean_circ: 0.933448
Ran for 224550 frames Cell Events: 9091 mean_circ: 0.933433
Ran for 225050 frames Cell Events: 9109 mean_circ: 0.933444
Ran for 226550 frames Cell Events: 9160 mean_circ: 0.93343
Ran for 228050 frames Cell Events: 9227 mean_circ: 0.933433
Ran for 229550 frames Cell Events: 9313 mean_circ: 0.933405
Ran for 230050 frames Cell Events: 9339 mean_circ: 0.933378
Ran for 230550 frames Cell Events: 9358 mean_circ: 0.93338
Ran for 231550 frames Cell Events: 9420 mean_circ: 0.933411
Ran for 232050 frames Cell Events: 9449 mean_circ: 0.933401
Ran for 233550 frames Cell Events: 9510 mean_circ: 0.933308
Ran for 234550 frames Cell Events: 9533 mean_circ: 0.933318
Ran for 235050 frames Cell Events: 9554 mean_circ: 0.933349
Ran for 235550 frames Cell Events: 9575 mean_circ: 0.933319
Ran for 236050 frames Cell Events: 9598 mean_circ: 0.933316
Ran for 236550 frames Cell Events: 9627 mean_circ: 0.933336
Ran for 238050 frames Cell Events: 9700 mean_circ: 0.933334
Ran for 238550 frames Cell Events: 9729 mean_circ: 0.933334
Ran for 239550 frames Cell Events: 9762 mean_circ: 0.933347
Ran for 240050 frames Cell Events: 9781 mean_circ: 0.933338
Ran for 241050 frames Cell Events: 9826 mean_circ: 0.933289
Ran for 241550 frames Cell Events: 9845 mean_circ: 0.933303
Ran for 242050 frames Cell Events: 9867 mean_circ: 0.933305
Ran for 242550 frames Cell Events: 9893 mean_circ: 0.933325
Ran for 243050 frames Cell Events: 9920 mean_circ: 0.933285
Ran for 243550 frames Cell Events: 9942 mean_circ: 0.933284
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 1.84306e+009
****************************************
Measurement finished
Mean Circularitiy: 0.93327
Mean Area: 623.607
Mean FL-1 intensity: 3105.86
Mean FL-2 intensity: 4455.87
Mean FL-3 intensity: 0
frames processed: 243349
Total Time: 122618ms
Number of Runs (new bg img) 0
Frames collected: 245013
Skipped frames: 11717
Rescued Frames: 546763
Samples DAQ: 61253923
Samples written: 122506324
Samples per Channel: 61253162
FPS: 1998.18
Samples per second: 499545
Expected samples/s: 500000
Events: 10001
Events per second: 81.5623
jumped back (PMT): 13
#Frames read, frequency
# 0 frames :331628
# 1 frames :139419
# 2 frames :5180
# 3 frames :1696
# 4 frames :699
# 5 frames :3367
# 6 frames :2657
# 7 frames :1744
# 8 frames :919
# 9 frames :566
# 10 frames :476
# 11 frames :348
# 12 frames :305
# 13 frames :217
# 14 frames :159
# 15 frames :137
# 16 frames :81
# 17 frames :68
# 18 frames :53
# 19 frames :45
# 20 frames :42
# 21 frames :37
# 22 frames :25
# 23 frames :21
# 24 frames :17
# 25 frames :15
# 26 frames :9
# 27 frames :8
# 28 frames :2
# 30 frames :3
# 31 frames :2
# 32 frames :2
# 33 frames :3
# 34 frames :1
# 35 frames :1
# 36 frames :2
# 38 frames :1
# 40 frames :3
# 45 frames :1
# 46 frames :1
# 70 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6647
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0