Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.19.21
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "aaf04ca388fe4fae15dabfa4bd821ab2",
"name": "M1_20170605_1649_dsRNA_J6_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:19:41"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8046 (max 8047) in '8046'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6599
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.84479e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 13 mean_circ: 0.955068
Ran for 1050 frames Cell Events: 21 mean_circ: 0.956496
Ran for 2050 frames Cell Events: 54 mean_circ: 0.945439
Ran for 2550 frames Cell Events: 65 mean_circ: 0.94477
Ran for 3050 frames Cell Events: 76 mean_circ: 0.946713
Ran for 3550 frames Cell Events: 91 mean_circ: 0.945714
Ran for 4050 frames Cell Events: 104 mean_circ: 0.946769
Ran for 4550 frames Cell Events: 112 mean_circ: 0.945227
Ran for 5550 frames Cell Events: 136 mean_circ: 0.945183
Ran for 6050 frames Cell Events: 146 mean_circ: 0.945935
Ran for 6550 frames Cell Events: 157 mean_circ: 0.945827
Ran for 7050 frames Cell Events: 166 mean_circ: 0.946286
Ran for 7550 frames Cell Events: 173 mean_circ: 0.946897
Ran for 8050 frames Cell Events: 184 mean_circ: 0.947336
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Ran for 9050 frames Cell Events: 204 mean_circ: 0.946364
Ran for 10050 frames Cell Events: 228 mean_circ: 0.945951
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Ran for 11050 frames Cell Events: 259 mean_circ: 0.945456
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Ran for 12050 frames Cell Events: 295 mean_circ: 0.94577
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Ran for 24550 frames Cell Events: 587 mean_circ: 0.946622
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Ran for 26050 frames Cell Events: 617 mean_circ: 0.946477
Ran for 27050 frames Cell Events: 643 mean_circ: 0.946559
Ran for 27550 frames Cell Events: 651 mean_circ: 0.946243
Ran for 28550 frames Cell Events: 688 mean_circ: 0.945727
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Ran for 30550 frames Cell Events: 736 mean_circ: 0.945619
Ran for 31050 frames Cell Events: 744 mean_circ: 0.945328
Ran for 31550 frames Cell Events: 754 mean_circ: 0.945316
Ran for 32050 frames Cell Events: 760 mean_circ: 0.945411
Ran for 32550 frames Cell Events: 772 mean_circ: 0.94558
Ran for 33050 frames Cell Events: 780 mean_circ: 0.945527
Ran for 34050 frames Cell Events: 801 mean_circ: 0.945851
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Ran for 52550 frames Cell Events: 1274 mean_circ: 0.945588
Ran for 53050 frames Cell Events: 1285 mean_circ: 0.945688
Ran for 53550 frames Cell Events: 1297 mean_circ: 0.945642
Ran for 54050 frames Cell Events: 1307 mean_circ: 0.945783
Ran for 54550 frames Cell Events: 1318 mean_circ: 0.945746
Ran for 55050 frames Cell Events: 1326 mean_circ: 0.94573
Ran for 56550 frames Cell Events: 1362 mean_circ: 0.945712
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Ran for 57550 frames Cell Events: 1395 mean_circ: 0.945824
Ran for 58050 frames Cell Events: 1404 mean_circ: 0.945941
Ran for 58550 frames Cell Events: 1412 mean_circ: 0.946031
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Ran for 60050 frames Cell Events: 1453 mean_circ: 0.946102
Ran for 60550 frames Cell Events: 1467 mean_circ: 0.946104
Ran for 61050 frames Cell Events: 1479 mean_circ: 0.946048
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Ran for 62050 frames Cell Events: 1504 mean_circ: 0.946258
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Ran for 64050 frames Cell Events: 1559 mean_circ: 0.946373
Ran for 64550 frames Cell Events: 1575 mean_circ: 0.946334
Ran for 65550 frames Cell Events: 1605 mean_circ: 0.946488
Ran for 66050 frames Cell Events: 1615 mean_circ: 0.946393
Ran for 66550 frames Cell Events: 1628 mean_circ: 0.946535
Ran for 67050 frames Cell Events: 1641 mean_circ: 0.946382
Ran for 68050 frames Cell Events: 1664 mean_circ: 0.946495
Ran for 68550 frames Cell Events: 1680 mean_circ: 0.946646
Ran for 69050 frames Cell Events: 1695 mean_circ: 0.946593
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Ran for 70050 frames Cell Events: 1719 mean_circ: 0.946462
Ran for 70550 frames Cell Events: 1733 mean_circ: 0.946353
Ran for 71050 frames Cell Events: 1744 mean_circ: 0.94644
Ran for 71550 frames Cell Events: 1756 mean_circ: 0.946418
Ran for 72050 frames Cell Events: 1764 mean_circ: 0.946484
Ran for 73050 frames Cell Events: 1802 mean_circ: 0.946538
Ran for 74050 frames Cell Events: 1831 mean_circ: 0.946675
Ran for 74550 frames Cell Events: 1845 mean_circ: 0.946707
Ran for 75050 frames Cell Events: 1858 mean_circ: 0.946647
Ran for 75550 frames Cell Events: 1872 mean_circ: 0.946624
Ran for 76050 frames Cell Events: 1879 mean_circ: 0.946645
Ran for 76550 frames Cell Events: 1887 mean_circ: 0.946571
Ran for 77050 frames Cell Events: 1893 mean_circ: 0.946635
Ran for 77550 frames Cell Events: 1906 mean_circ: 0.946674
Ran for 78050 frames Cell Events: 1913 mean_circ: 0.946661
Ran for 78550 frames Cell Events: 1922 mean_circ: 0.94672
Ran for 79550 frames Cell Events: 1955 mean_circ: 0.946859
Ran for 80050 frames Cell Events: 1966 mean_circ: 0.946927
Ran for 80550 frames Cell Events: 1973 mean_circ: 0.946921
Ran for 81050 frames Cell Events: 1985 mean_circ: 0.94691
Ran for 81550 frames Cell Events: 2003 mean_circ: 0.946914
Ran for 82050 frames Cell Events: 2030 mean_circ: 0.946833
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Ran for 83550 frames Cell Events: 2070 mean_circ: 0.946687
Ran for 84050 frames Cell Events: 2090 mean_circ: 0.946568
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Ran for 86550 frames Cell Events: 2142 mean_circ: 0.946692
Ran for 87050 frames Cell Events: 2153 mean_circ: 0.946642
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Ran for 90550 frames Cell Events: 2245 mean_circ: 0.946579
Ran for 91050 frames Cell Events: 2260 mean_circ: 0.94658
Ran for 92050 frames Cell Events: 2279 mean_circ: 0.946641
Ran for 92550 frames Cell Events: 2299 mean_circ: 0.946679
Ran for 93550 frames Cell Events: 2336 mean_circ: 0.9467
Ran for 95050 frames Cell Events: 2375 mean_circ: 0.946648
Ran for 95550 frames Cell Events: 2382 mean_circ: 0.946661
Ran for 96050 frames Cell Events: 2397 mean_circ: 0.946587
Ran for 96550 frames Cell Events: 2403 mean_circ: 0.946648
Ran for 97050 frames Cell Events: 2417 mean_circ: 0.946697
Ran for 97550 frames Cell Events: 2431 mean_circ: 0.94671
Ran for 98050 frames Cell Events: 2452 mean_circ: 0.946792
Ran for 98550 frames Cell Events: 2463 mean_circ: 0.94678
Ran for 99050 frames Cell Events: 2480 mean_circ: 0.946755
Ran for 100050 frames Cell Events: 2504 mean_circ: 0.946853
Ran for 100550 frames Cell Events: 2517 mean_circ: 0.946924
Ran for 101050 frames Cell Events: 2532 mean_circ: 0.946992
Ran for 101550 frames Cell Events: 2551 mean_circ: 0.947006
Ran for 102050 frames Cell Events: 2563 mean_circ: 0.94703
Ran for 102550 frames Cell Events: 2568 mean_circ: 0.947064
Ran for 103550 frames Cell Events: 2610 mean_circ: 0.947098
Ran for 104050 frames Cell Events: 2623 mean_circ: 0.947083
Ran for 105050 frames Cell Events: 2660 mean_circ: 0.947126
Ran for 105550 frames Cell Events: 2676 mean_circ: 0.947107
Ran for 106050 frames Cell Events: 2697 mean_circ: 0.947106
Ran for 106550 frames Cell Events: 2707 mean_circ: 0.9471
Ran for 107050 frames Cell Events: 2727 mean_circ: 0.94709
Ran for 107550 frames Cell Events: 2748 mean_circ: 0.947042
Ran for 108050 frames Cell Events: 2756 mean_circ: 0.947052
Ran for 109550 frames Cell Events: 2796 mean_circ: 0.94705
Ran for 110050 frames Cell Events: 2805 mean_circ: 0.947084
Ran for 111050 frames Cell Events: 2831 mean_circ: 0.946968
Ran for 111550 frames Cell Events: 2841 mean_circ: 0.946905
Ran for 112050 frames Cell Events: 2860 mean_circ: 0.946907
Ran for 112550 frames Cell Events: 2873 mean_circ: 0.946909
Ran for 113050 frames Cell Events: 2890 mean_circ: 0.946915
Ran for 113550 frames Cell Events: 2900 mean_circ: 0.946851
Ran for 114050 frames Cell Events: 2907 mean_circ: 0.94685
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Ran for 115050 frames Cell Events: 2941 mean_circ: 0.946767
Ran for 115550 frames Cell Events: 2953 mean_circ: 0.946738
Ran for 116050 frames Cell Events: 2970 mean_circ: 0.946731
Ran for 116550 frames Cell Events: 2978 mean_circ: 0.946765
Ran for 117050 frames Cell Events: 2990 mean_circ: 0.946731
Ran for 117550 frames Cell Events: 3000 mean_circ: 0.946719
Ran for 119050 frames Cell Events: 3054 mean_circ: 0.946801
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Ran for 120050 frames Cell Events: 3084 mean_circ: 0.946725
Ran for 120550 frames Cell Events: 3096 mean_circ: 0.946785
Ran for 121050 frames Cell Events: 3114 mean_circ: 0.946824
Ran for 121550 frames Cell Events: 3126 mean_circ: 0.946845
Ran for 122050 frames Cell Events: 3145 mean_circ: 0.946912
Ran for 122550 frames Cell Events: 3157 mean_circ: 0.946893
Ran for 123050 frames Cell Events: 3175 mean_circ: 0.94693
Ran for 123550 frames Cell Events: 3192 mean_circ: 0.946962
Ran for 124050 frames Cell Events: 3201 mean_circ: 0.946873
Ran for 124550 frames Cell Events: 3214 mean_circ: 0.946891
Ran for 125050 frames Cell Events: 3226 mean_circ: 0.94689
Ran for 126550 frames Cell Events: 3275 mean_circ: 0.946693
Ran for 127050 frames Cell Events: 3292 mean_circ: 0.946635
Ran for 127550 frames Cell Events: 3311 mean_circ: 0.946618
Ran for 128050 frames Cell Events: 3330 mean_circ: 0.946466
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Ran for 133050 frames Cell Events: 3472 mean_circ: 0.946485
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Ran for 142050 frames Cell Events: 3711 mean_circ: 0.94664
Ran for 142550 frames Cell Events: 3722 mean_circ: 0.94666
Ran for 143050 frames Cell Events: 3738 mean_circ: 0.946618
Ran for 143550 frames Cell Events: 3750 mean_circ: 0.946612
Ran for 144050 frames Cell Events: 3758 mean_circ: 0.946538
Ran for 144550 frames Cell Events: 3770 mean_circ: 0.9465
Ran for 145550 frames Cell Events: 3804 mean_circ: 0.946563
Ran for 146050 frames Cell Events: 3827 mean_circ: 0.946582
Ran for 146550 frames Cell Events: 3845 mean_circ: 0.94664
Ran for 147050 frames Cell Events: 3862 mean_circ: 0.946611
Ran for 147550 frames Cell Events: 3870 mean_circ: 0.946592
Ran for 148050 frames Cell Events: 3881 mean_circ: 0.946613
Ran for 148550 frames Cell Events: 3895 mean_circ: 0.946679
Ran for 149050 frames Cell Events: 3910 mean_circ: 0.946648
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Ran for 151050 frames Cell Events: 3983 mean_circ: 0.946514
Ran for 151550 frames Cell Events: 4002 mean_circ: 0.946564
Ran for 152050 frames Cell Events: 4015 mean_circ: 0.946612
Ran for 152550 frames Cell Events: 4033 mean_circ: 0.946624
Ran for 154050 frames Cell Events: 4110 mean_circ: 0.946401
Ran for 154550 frames Cell Events: 4132 mean_circ: 0.946366
Ran for 155550 frames Cell Events: 4168 mean_circ: 0.946278
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Ran for 156550 frames Cell Events: 4192 mean_circ: 0.946251
Ran for 157550 frames Cell Events: 4229 mean_circ: 0.946212
Ran for 158050 frames Cell Events: 4248 mean_circ: 0.946169
Ran for 158550 frames Cell Events: 4264 mean_circ: 0.946183
Ran for 159050 frames Cell Events: 4275 mean_circ: 0.946187
Ran for 159550 frames Cell Events: 4294 mean_circ: 0.946134
Ran for 160050 frames Cell Events: 4308 mean_circ: 0.94617
Ran for 160550 frames Cell Events: 4321 mean_circ: 0.946193
Ran for 161050 frames Cell Events: 4331 mean_circ: 0.946152
Ran for 162050 frames Cell Events: 4350 mean_circ: 0.946138
Ran for 162550 frames Cell Events: 4373 mean_circ: 0.946117
Ran for 163050 frames Cell Events: 4390 mean_circ: 0.946085
Ran for 163550 frames Cell Events: 4401 mean_circ: 0.946095
Ran for 164550 frames Cell Events: 4437 mean_circ: 0.946105
Ran for 165050 frames Cell Events: 4450 mean_circ: 0.946118
Ran for 165550 frames Cell Events: 4471 mean_circ: 0.946169
Ran for 166050 frames Cell Events: 4486 mean_circ: 0.946157
Ran for 166550 frames Cell Events: 4497 mean_circ: 0.946222
Ran for 167050 frames Cell Events: 4508 mean_circ: 0.946207
Ran for 168050 frames Cell Events: 4543 mean_circ: 0.946233
Ran for 168550 frames Cell Events: 4567 mean_circ: 0.946294
Ran for 169050 frames Cell Events: 4579 mean_circ: 0.946332
Ran for 169550 frames Cell Events: 4588 mean_circ: 0.946347
Ran for 170550 frames Cell Events: 4617 mean_circ: 0.946404
Ran for 171550 frames Cell Events: 4654 mean_circ: 0.946472
Ran for 172550 frames Cell Events: 4681 mean_circ: 0.946505
Ran for 173050 frames Cell Events: 4706 mean_circ: 0.946556
Ran for 173550 frames Cell Events: 4721 mean_circ: 0.946543
Ran for 174050 frames Cell Events: 4746 mean_circ: 0.946536
Ran for 174550 frames Cell Events: 4760 mean_circ: 0.946543
Ran for 175050 frames Cell Events: 4780 mean_circ: 0.946613
Ran for 175550 frames Cell Events: 4795 mean_circ: 0.946638
Ran for 176050 frames Cell Events: 4806 mean_circ: 0.94663
Ran for 177550 frames Cell Events: 4858 mean_circ: 0.946613
Ran for 178050 frames Cell Events: 4885 mean_circ: 0.946666
Ran for 179050 frames Cell Events: 4904 mean_circ: 0.946578
Ran for 179550 frames Cell Events: 4916 mean_circ: 0.946595
Ran for 180050 frames Cell Events: 4926 mean_circ: 0.946588
Ran for 180550 frames Cell Events: 4935 mean_circ: 0.946586
Ran for 181050 frames Cell Events: 4945 mean_circ: 0.94659
Ran for 182050 frames Cell Events: 4978 mean_circ: 0.94658
Ran for 182550 frames Cell Events: 4990 mean_circ: 0.946633
Ran for 183050 frames Cell Events: 5011 mean_circ: 0.946666
Ran for 183550 frames Cell Events: 5018 mean_circ: 0.946717
Ran for 184050 frames Cell Events: 5030 mean_circ: 0.94672
Ran for 185050 frames Cell Events: 5053 mean_circ: 0.946725
Ran for 185550 frames Cell Events: 5072 mean_circ: 0.946734
Ran for 186050 frames Cell Events: 5091 mean_circ: 0.946711
Ran for 186550 frames Cell Events: 5105 mean_circ: 0.946716
Ran for 187050 frames Cell Events: 5123 mean_circ: 0.946698
Ran for 187550 frames Cell Events: 5139 mean_circ: 0.946707
Ran for 188050 frames Cell Events: 5153 mean_circ: 0.946736
Ran for 188550 frames Cell Events: 5160 mean_circ: 0.946752
Ran for 189050 frames Cell Events: 5169 mean_circ: 0.946761
Ran for 190550 frames Cell Events: 5230 mean_circ: 0.946791
Ran for 191050 frames Cell Events: 5247 mean_circ: 0.946789
Ran for 191550 frames Cell Events: 5265 mean_circ: 0.946796
Ran for 192050 frames Cell Events: 5274 mean_circ: 0.946806
Ran for 192550 frames Cell Events: 5290 mean_circ: 0.946845
Ran for 193550 frames Cell Events: 5329 mean_circ: 0.946834
Ran for 194050 frames Cell Events: 5342 mean_circ: 0.946847
Ran for 194550 frames Cell Events: 5369 mean_circ: 0.946879
Ran for 195050 frames Cell Events: 5392 mean_circ: 0.946899
Ran for 195550 frames Cell Events: 5405 mean_circ: 0.946925
Ran for 196050 frames Cell Events: 5418 mean_circ: 0.946881
Ran for 196550 frames Cell Events: 5434 mean_circ: 0.946903
Ran for 197050 frames Cell Events: 5450 mean_circ: 0.946936
Ran for 197550 frames Cell Events: 5461 mean_circ: 0.94693
Ran for 198050 frames Cell Events: 5476 mean_circ: 0.946897
Ran for 198550 frames Cell Events: 5484 mean_circ: 0.946914
Ran for 199050 frames Cell Events: 5497 mean_circ: 0.946927
Ran for 199550 frames Cell Events: 5511 mean_circ: 0.946963
Ran for 200050 frames Cell Events: 5525 mean_circ: 0.946952
Ran for 201550 frames Cell Events: 5575 mean_circ: 0.946996
Ran for 203050 frames Cell Events: 5643 mean_circ: 0.946979
Ran for 203550 frames Cell Events: 5663 mean_circ: 0.946998
Ran for 204550 frames Cell Events: 5690 mean_circ: 0.947015
Ran for 205050 frames Cell Events: 5707 mean_circ: 0.947064
Ran for 205550 frames Cell Events: 5721 mean_circ: 0.947048
Ran for 206050 frames Cell Events: 5745 mean_circ: 0.947041
Ran for 206550 frames Cell Events: 5765 mean_circ: 0.94702
Ran for 207050 frames Cell Events: 5777 mean_circ: 0.946992
Ran for 207550 frames Cell Events: 5785 mean_circ: 0.946994
Ran for 208050 frames Cell Events: 5792 mean_circ: 0.947007
Ran for 208550 frames Cell Events: 5809 mean_circ: 0.947043
Ran for 209050 frames Cell Events: 5822 mean_circ: 0.947042
Ran for 210050 frames Cell Events: 5850 mean_circ: 0.947055
Ran for 211550 frames Cell Events: 5904 mean_circ: 0.947066
Ran for 212050 frames Cell Events: 5912 mean_circ: 0.947086
Ran for 212550 frames Cell Events: 5929 mean_circ: 0.947091
Ran for 213050 frames Cell Events: 5944 mean_circ: 0.94711
Ran for 213550 frames Cell Events: 5955 mean_circ: 0.947128
Ran for 214050 frames Cell Events: 5977 mean_circ: 0.94714
Ran for 215050 frames Cell Events: 6004 mean_circ: 0.947166
Ran for 215550 frames Cell Events: 6020 mean_circ: 0.947158
Ran for 216050 frames Cell Events: 6032 mean_circ: 0.947177
Ran for 216550 frames Cell Events: 6046 mean_circ: 0.947201
Ran for 217050 frames Cell Events: 6053 mean_circ: 0.947196
Ran for 217550 frames Cell Events: 6068 mean_circ: 0.947221
Ran for 218050 frames Cell Events: 6085 mean_circ: 0.947255
Ran for 218550 frames Cell Events: 6093 mean_circ: 0.947265
Ran for 219050 frames Cell Events: 6115 mean_circ: 0.947265
Ran for 219550 frames Cell Events: 6126 mean_circ: 0.947289
Ran for 220550 frames Cell Events: 6145 mean_circ: 0.947307
Ran for 221550 frames Cell Events: 6174 mean_circ: 0.947315
Ran for 222050 frames Cell Events: 6179 mean_circ: 0.947327
Ran for 222550 frames Cell Events: 6185 mean_circ: 0.947334
Ran for 223050 frames Cell Events: 6201 mean_circ: 0.947353
Ran for 223550 frames Cell Events: 6218 mean_circ: 0.947391
Ran for 224050 frames Cell Events: 6243 mean_circ: 0.947405
Ran for 224550 frames Cell Events: 6253 mean_circ: 0.947396
Ran for 225050 frames Cell Events: 6272 mean_circ: 0.947404
Ran for 225550 frames Cell Events: 6291 mean_circ: 0.947408
Ran for 226050 frames Cell Events: 6311 mean_circ: 0.947395
Ran for 226550 frames Cell Events: 6327 mean_circ: 0.947397
Ran for 227050 frames Cell Events: 6340 mean_circ: 0.947419
Ran for 227550 frames Cell Events: 6350 mean_circ: 0.947397
Ran for 228050 frames Cell Events: 6361 mean_circ: 0.947419
Ran for 228550 frames Cell Events: 6377 mean_circ: 0.947431
Ran for 229050 frames Cell Events: 6389 mean_circ: 0.947417
Ran for 229550 frames Cell Events: 6398 mean_circ: 0.947409
Ran for 230550 frames Cell Events: 6428 mean_circ: 0.947426
Ran for 231050 frames Cell Events: 6454 mean_circ: 0.947429
Ran for 231550 frames Cell Events: 6469 mean_circ: 0.947407
Ran for 232050 frames Cell Events: 6485 mean_circ: 0.947429
Ran for 232550 frames Cell Events: 6498 mean_circ: 0.947452
Ran for 233050 frames Cell Events: 6519 mean_circ: 0.94741
Ran for 233550 frames Cell Events: 6533 mean_circ: 0.947409
Ran for 234050 frames Cell Events: 6556 mean_circ: 0.947428
Ran for 234550 frames Cell Events: 6572 mean_circ: 0.947387
Ran for 236050 frames Cell Events: 6624 mean_circ: 0.947392
Ran for 236550 frames Cell Events: 6639 mean_circ: 0.947417
Ran for 237050 frames Cell Events: 6646 mean_circ: 0.947435
Ran for 237550 frames Cell Events: 6669 mean_circ: 0.947426
Ran for 238050 frames Cell Events: 6686 mean_circ: 0.947445
Ran for 238550 frames Cell Events: 6695 mean_circ: 0.947451
Ran for 239550 frames Cell Events: 6734 mean_circ: 0.947473
Ran for 240050 frames Cell Events: 6750 mean_circ: 0.947491
Ran for 240550 frames Cell Events: 6767 mean_circ: 0.947476
Ran for 241550 frames Cell Events: 6811 mean_circ: 0.947478
Ran for 242550 frames Cell Events: 6847 mean_circ: 0.947516
Ran for 243050 frames Cell Events: 6858 mean_circ: 0.94751
Ran for 243550 frames Cell Events: 6877 mean_circ: 0.94752
Ran for 244050 frames Cell Events: 6892 mean_circ: 0.947506
Ran for 244550 frames Cell Events: 6906 mean_circ: 0.947518
Ran for 245050 frames Cell Events: 6926 mean_circ: 0.94756
Ran for 245550 frames Cell Events: 6945 mean_circ: 0.947604
Ran for 246050 frames Cell Events: 6974 mean_circ: 0.947624
Ran for 246550 frames Cell Events: 6993 mean_circ: 0.947679
Ran for 247550 frames Cell Events: 7029 mean_circ: 0.947661
Ran for 248550 frames Cell Events: 7062 mean_circ: 0.947658
Ran for 249050 frames Cell Events: 7072 mean_circ: 0.947628
Ran for 249550 frames Cell Events: 7091 mean_circ: 0.947624
Ran for 250050 frames Cell Events: 7104 mean_circ: 0.947628
Ran for 250550 frames Cell Events: 7127 mean_circ: 0.947628
Ran for 251050 frames Cell Events: 7141 mean_circ: 0.947636
Ran for 251550 frames Cell Events: 7154 mean_circ: 0.947634
Ran for 252550 frames Cell Events: 7176 mean_circ: 0.94768
Ran for 253050 frames Cell Events: 7200 mean_circ: 0.947693
Ran for 253550 frames Cell Events: 7228 mean_circ: 0.947635
Ran for 254050 frames Cell Events: 7244 mean_circ: 0.947667
Ran for 255050 frames Cell Events: 7276 mean_circ: 0.947689
Ran for 256050 frames Cell Events: 7316 mean_circ: 0.947736
Ran for 256550 frames Cell Events: 7337 mean_circ: 0.94775
Ran for 257050 frames Cell Events: 7348 mean_circ: 0.947773
Ran for 258550 frames Cell Events: 7381 mean_circ: 0.947804
Ran for 259050 frames Cell Events: 7398 mean_circ: 0.947831
Ran for 259550 frames Cell Events: 7410 mean_circ: 0.947821
Ran for 260050 frames Cell Events: 7421 mean_circ: 0.94784
Ran for 261050 frames Cell Events: 7446 mean_circ: 0.947837
Ran for 261550 frames Cell Events: 7461 mean_circ: 0.947837
Ran for 262550 frames Cell Events: 7496 mean_circ: 0.947891
Ran for 263050 frames Cell Events: 7505 mean_circ: 0.947873
Ran for 264050 frames Cell Events: 7537 mean_circ: 0.947906
Ran for 265050 frames Cell Events: 7574 mean_circ: 0.947871
Ran for 265550 frames Cell Events: 7588 mean_circ: 0.947842
Ran for 266050 frames Cell Events: 7599 mean_circ: 0.947812
Ran for 267550 frames Cell Events: 7657 mean_circ: 0.947794
Ran for 268550 frames Cell Events: 7686 mean_circ: 0.947765
Ran for 269050 frames Cell Events: 7708 mean_circ: 0.947718
Ran for 269550 frames Cell Events: 7719 mean_circ: 0.947725
Ran for 270050 frames Cell Events: 7740 mean_circ: 0.947746
Ran for 271550 frames Cell Events: 7779 mean_circ: 0.947723
Ran for 273050 frames Cell Events: 7829 mean_circ: 0.947702
Ran for 273550 frames Cell Events: 7843 mean_circ: 0.947714
Ran for 274050 frames Cell Events: 7860 mean_circ: 0.947746
Ran for 274550 frames Cell Events: 7886 mean_circ: 0.947706
Ran for 275050 frames Cell Events: 7914 mean_circ: 0.947716
Ran for 275550 frames Cell Events: 7937 mean_circ: 0.947721
Ran for 276050 frames Cell Events: 7948 mean_circ: 0.947699
Ran for 276550 frames Cell Events: 7966 mean_circ: 0.947686
Ran for 277550 frames Cell Events: 8010 mean_circ: 0.947698
Ran for 278050 frames Cell Events: 8023 mean_circ: 0.947711
End this measurment..
Stopping time: 1.84493e+009
****************************************
Measurement finished
Mean Circularitiy: 0.947721
Mean Area: 607.857
Mean FL-1 intensity: 3377.23
Mean FL-2 intensity: 3960.33
Mean FL-3 intensity: 0
frames processed: 277608
Total Time: 139416ms
Number of Runs (new bg img) 0
Frames collected: 278702
Skipped frames: 19915
Rescued Frames: 904527
Samples DAQ: 69675636
Samples written: 139351114
Samples per Channel: 69675557
FPS: 1999.07
Samples per second: 499768
Expected samples/s: 500000
Events: 8047
Events per second: 57.7194
jumped back (PMT): 5944
#Frames read, frequency
# 0 frames :361924
# 1 frames :177500
# 2 frames :5088
# 3 frames :1855
# 4 frames :775
# 5 frames :2855
# 6 frames :2243
# 7 frames :1288
# 8 frames :610
# 9 frames :389
# 10 frames :880
# 11 frames :546
# 12 frames :389
# 13 frames :244
# 14 frames :144
# 15 frames :132
# 16 frames :114
# 17 frames :97
# 18 frames :100
# 19 frames :62
# 20 frames :32
# 21 frames :22
# 22 frames :22
# 23 frames :16
# 24 frames :7
# 25 frames :4
# 26 frames :4
# 27 frames :6
# 28 frames :2
# 29 frames :1
# 30 frames :5
# 31 frames :2
# 32 frames :1
# 33 frames :1
# 34 frames :2
# 38 frames :1
# 40 frames :1
# 48 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6599
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0