Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.26.49
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "05232941e38616a45b1adea5a10ab95e",
"name": "M1_20170605_1823_dsRNA_K6_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:27:10"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6413
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.8504e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.933405
Ran for 550 frames Cell Events: 12 mean_circ: 0.941514
Ran for 1050 frames Cell Events: 33 mean_circ: 0.953901
Ran for 1550 frames Cell Events: 51 mean_circ: 0.956223
Ran for 2550 frames Cell Events: 75 mean_circ: 0.958662
Ran for 3050 frames Cell Events: 91 mean_circ: 0.955225
Ran for 3550 frames Cell Events: 111 mean_circ: 0.955321
Ran for 4050 frames Cell Events: 127 mean_circ: 0.955163
Ran for 4550 frames Cell Events: 145 mean_circ: 0.955519
Ran for 5050 frames Cell Events: 166 mean_circ: 0.953179
Ran for 5550 frames Cell Events: 181 mean_circ: 0.952523
Ran for 6050 frames Cell Events: 193 mean_circ: 0.952388
Ran for 6550 frames Cell Events: 219 mean_circ: 0.95242
Ran for 7550 frames Cell Events: 264 mean_circ: 0.952312
Ran for 9550 frames Cell Events: 330 mean_circ: 0.952562
Ran for 10550 frames Cell Events: 363 mean_circ: 0.952963
Ran for 11050 frames Cell Events: 377 mean_circ: 0.952761
Ran for 11550 frames Cell Events: 399 mean_circ: 0.953087
Ran for 12050 frames Cell Events: 417 mean_circ: 0.953094
Ran for 12550 frames Cell Events: 438 mean_circ: 0.952815
Ran for 13050 frames Cell Events: 452 mean_circ: 0.953227
Ran for 13550 frames Cell Events: 467 mean_circ: 0.953019
Ran for 14050 frames Cell Events: 492 mean_circ: 0.952454
Ran for 14550 frames Cell Events: 514 mean_circ: 0.952479
Ran for 15550 frames Cell Events: 549 mean_circ: 0.95235
Ran for 16050 frames Cell Events: 567 mean_circ: 0.952124
Ran for 16550 frames Cell Events: 587 mean_circ: 0.952172
Ran for 17050 frames Cell Events: 599 mean_circ: 0.952107
Ran for 18050 frames Cell Events: 639 mean_circ: 0.951951
Ran for 18550 frames Cell Events: 663 mean_circ: 0.951869
Ran for 19550 frames Cell Events: 696 mean_circ: 0.951797
Ran for 20550 frames Cell Events: 724 mean_circ: 0.951521
Ran for 22050 frames Cell Events: 777 mean_circ: 0.951779
Ran for 22550 frames Cell Events: 800 mean_circ: 0.952052
Ran for 24050 frames Cell Events: 843 mean_circ: 0.951689
Ran for 24550 frames Cell Events: 862 mean_circ: 0.951653
Ran for 25050 frames Cell Events: 880 mean_circ: 0.951698
Ran for 25550 frames Cell Events: 907 mean_circ: 0.951618
Ran for 26050 frames Cell Events: 928 mean_circ: 0.951846
Ran for 26550 frames Cell Events: 943 mean_circ: 0.951873
Ran for 27050 frames Cell Events: 961 mean_circ: 0.95197
Ran for 27550 frames Cell Events: 974 mean_circ: 0.951918
Ran for 28550 frames Cell Events: 987 mean_circ: 0.951955
Ran for 29050 frames Cell Events: 1016 mean_circ: 0.951801
Ran for 29550 frames Cell Events: 1038 mean_circ: 0.951686
Ran for 30050 frames Cell Events: 1056 mean_circ: 0.951741
Ran for 30550 frames Cell Events: 1071 mean_circ: 0.951714
Ran for 31050 frames Cell Events: 1077 mean_circ: 0.951748
Ran for 31550 frames Cell Events: 1086 mean_circ: 0.951792
Ran for 32050 frames Cell Events: 1108 mean_circ: 0.951836
Ran for 32550 frames Cell Events: 1122 mean_circ: 0.951859
Ran for 33050 frames Cell Events: 1135 mean_circ: 0.951941
Ran for 33550 frames Cell Events: 1173 mean_circ: 0.952022
Ran for 35050 frames Cell Events: 1237 mean_circ: 0.951936
Ran for 35550 frames Cell Events: 1260 mean_circ: 0.952029
Ran for 36050 frames Cell Events: 1285 mean_circ: 0.951939
Ran for 37050 frames Cell Events: 1323 mean_circ: 0.952197
Ran for 37550 frames Cell Events: 1342 mean_circ: 0.952018
Ran for 38050 frames Cell Events: 1357 mean_circ: 0.952021
Ran for 38550 frames Cell Events: 1372 mean_circ: 0.951744
Ran for 39050 frames Cell Events: 1391 mean_circ: 0.951762
Ran for 39550 frames Cell Events: 1425 mean_circ: 0.951534
Ran for 40050 frames Cell Events: 1438 mean_circ: 0.951277
Ran for 40550 frames Cell Events: 1448 mean_circ: 0.951368
Ran for 41050 frames Cell Events: 1466 mean_circ: 0.951363
Ran for 41550 frames Cell Events: 1483 mean_circ: 0.951319
Ran for 42050 frames Cell Events: 1493 mean_circ: 0.951357
Ran for 42550 frames Cell Events: 1511 mean_circ: 0.951106
Ran for 43050 frames Cell Events: 1526 mean_circ: 0.951122
Ran for 44050 frames Cell Events: 1551 mean_circ: 0.951112
Ran for 44550 frames Cell Events: 1565 mean_circ: 0.950953
Ran for 45050 frames Cell Events: 1577 mean_circ: 0.951018
Ran for 45550 frames Cell Events: 1597 mean_circ: 0.951017
Ran for 46050 frames Cell Events: 1621 mean_circ: 0.951127
Ran for 46550 frames Cell Events: 1631 mean_circ: 0.951163
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Ran for 47550 frames Cell Events: 1674 mean_circ: 0.951108
Ran for 48050 frames Cell Events: 1693 mean_circ: 0.950967
Ran for 48550 frames Cell Events: 1711 mean_circ: 0.950696
Ran for 49550 frames Cell Events: 1765 mean_circ: 0.950494
Ran for 50050 frames Cell Events: 1780 mean_circ: 0.950558
Ran for 50550 frames Cell Events: 1794 mean_circ: 0.95067
Ran for 51050 frames Cell Events: 1826 mean_circ: 0.950594
Ran for 52050 frames Cell Events: 1862 mean_circ: 0.950655
Ran for 52550 frames Cell Events: 1880 mean_circ: 0.950578
Ran for 53550 frames Cell Events: 1917 mean_circ: 0.950551
Ran for 54050 frames Cell Events: 1933 mean_circ: 0.950449
Ran for 55050 frames Cell Events: 1974 mean_circ: 0.950416
Ran for 56050 frames Cell Events: 2011 mean_circ: 0.950342
Ran for 56550 frames Cell Events: 2029 mean_circ: 0.950441
Ran for 57550 frames Cell Events: 2065 mean_circ: 0.950561
Ran for 58550 frames Cell Events: 2092 mean_circ: 0.950641
Ran for 59050 frames Cell Events: 2114 mean_circ: 0.950628
Ran for 59550 frames Cell Events: 2137 mean_circ: 0.950644
Ran for 60050 frames Cell Events: 2160 mean_circ: 0.950608
Ran for 61050 frames Cell Events: 2198 mean_circ: 0.950479
Ran for 61550 frames Cell Events: 2222 mean_circ: 0.950498
Ran for 62050 frames Cell Events: 2240 mean_circ: 0.950378
Ran for 62550 frames Cell Events: 2257 mean_circ: 0.950406
Ran for 63050 frames Cell Events: 2273 mean_circ: 0.950355
Ran for 64050 frames Cell Events: 2307 mean_circ: 0.950408
Ran for 64550 frames Cell Events: 2325 mean_circ: 0.950406
Ran for 65050 frames Cell Events: 2343 mean_circ: 0.950365
Ran for 65550 frames Cell Events: 2357 mean_circ: 0.950337
Ran for 66050 frames Cell Events: 2370 mean_circ: 0.950282
Ran for 66550 frames Cell Events: 2381 mean_circ: 0.950287
Ran for 67550 frames Cell Events: 2427 mean_circ: 0.950439
Ran for 68050 frames Cell Events: 2445 mean_circ: 0.950551
Ran for 68550 frames Cell Events: 2455 mean_circ: 0.950516
Ran for 69050 frames Cell Events: 2468 mean_circ: 0.950511
Ran for 69550 frames Cell Events: 2484 mean_circ: 0.95056
Ran for 70550 frames Cell Events: 2511 mean_circ: 0.950565
Ran for 71550 frames Cell Events: 2555 mean_circ: 0.950577
Ran for 72050 frames Cell Events: 2579 mean_circ: 0.950629
Ran for 72550 frames Cell Events: 2597 mean_circ: 0.950696
Ran for 73050 frames Cell Events: 2614 mean_circ: 0.950614
Ran for 73550 frames Cell Events: 2632 mean_circ: 0.950572
Ran for 74050 frames Cell Events: 2659 mean_circ: 0.950616
Ran for 74550 frames Cell Events: 2673 mean_circ: 0.950546
Ran for 75550 frames Cell Events: 2704 mean_circ: 0.950515
Ran for 76550 frames Cell Events: 2737 mean_circ: 0.950543
Ran for 77550 frames Cell Events: 2767 mean_circ: 0.950575
Ran for 78550 frames Cell Events: 2800 mean_circ: 0.950616
Ran for 79050 frames Cell Events: 2822 mean_circ: 0.950643
Ran for 79550 frames Cell Events: 2839 mean_circ: 0.95068
Ran for 80050 frames Cell Events: 2856 mean_circ: 0.950661
Ran for 80550 frames Cell Events: 2879 mean_circ: 0.950608
Ran for 81050 frames Cell Events: 2894 mean_circ: 0.950689
Ran for 81550 frames Cell Events: 2910 mean_circ: 0.950681
Ran for 82050 frames Cell Events: 2921 mean_circ: 0.950669
Ran for 83050 frames Cell Events: 2948 mean_circ: 0.950666
Ran for 84050 frames Cell Events: 2986 mean_circ: 0.950595
Ran for 84550 frames Cell Events: 3002 mean_circ: 0.950605
Ran for 85050 frames Cell Events: 3018 mean_circ: 0.950546
Ran for 85550 frames Cell Events: 3036 mean_circ: 0.950607
Ran for 86050 frames Cell Events: 3048 mean_circ: 0.950587
Ran for 86550 frames Cell Events: 3063 mean_circ: 0.95059
Ran for 87050 frames Cell Events: 3079 mean_circ: 0.950457
Ran for 87550 frames Cell Events: 3094 mean_circ: 0.950394
Ran for 88050 frames Cell Events: 3110 mean_circ: 0.950335
Ran for 89050 frames Cell Events: 3158 mean_circ: 0.95032
Ran for 89550 frames Cell Events: 3167 mean_circ: 0.950284
Ran for 90050 frames Cell Events: 3183 mean_circ: 0.950298
Ran for 90550 frames Cell Events: 3194 mean_circ: 0.950261
Ran for 91050 frames Cell Events: 3208 mean_circ: 0.950293
Ran for 91550 frames Cell Events: 3229 mean_circ: 0.950189
Ran for 92050 frames Cell Events: 3247 mean_circ: 0.950207
Ran for 92550 frames Cell Events: 3257 mean_circ: 0.950148
Ran for 93050 frames Cell Events: 3262 mean_circ: 0.950157
Ran for 93550 frames Cell Events: 3278 mean_circ: 0.950083
Ran for 94050 frames Cell Events: 3294 mean_circ: 0.950033
Ran for 94550 frames Cell Events: 3310 mean_circ: 0.95006
Ran for 95050 frames Cell Events: 3328 mean_circ: 0.950068
Ran for 95550 frames Cell Events: 3340 mean_circ: 0.950115
Ran for 96550 frames Cell Events: 3381 mean_circ: 0.950142
Ran for 97550 frames Cell Events: 3419 mean_circ: 0.950109
Ran for 98050 frames Cell Events: 3439 mean_circ: 0.950103
Ran for 99050 frames Cell Events: 3473 mean_circ: 0.949989
Ran for 99550 frames Cell Events: 3487 mean_circ: 0.950008
Ran for 100050 frames Cell Events: 3507 mean_circ: 0.950002
Ran for 100550 frames Cell Events: 3534 mean_circ: 0.950004
Ran for 101050 frames Cell Events: 3551 mean_circ: 0.950065
Ran for 101550 frames Cell Events: 3584 mean_circ: 0.950066
Ran for 102050 frames Cell Events: 3606 mean_circ: 0.949921
Ran for 102550 frames Cell Events: 3624 mean_circ: 0.949928
Ran for 103050 frames Cell Events: 3634 mean_circ: 0.949969
Ran for 103550 frames Cell Events: 3645 mean_circ: 0.950035
Ran for 104050 frames Cell Events: 3678 mean_circ: 0.950026
Ran for 104550 frames Cell Events: 3692 mean_circ: 0.950044
Ran for 105050 frames Cell Events: 3707 mean_circ: 0.950025
Ran for 105550 frames Cell Events: 3741 mean_circ: 0.950032
Ran for 106050 frames Cell Events: 3766 mean_circ: 0.950039
Ran for 106550 frames Cell Events: 3784 mean_circ: 0.95004
Ran for 107550 frames Cell Events: 3820 mean_circ: 0.949993
Ran for 108050 frames Cell Events: 3836 mean_circ: 0.949985
Ran for 108550 frames Cell Events: 3849 mean_circ: 0.949919
Ran for 109050 frames Cell Events: 3868 mean_circ: 0.949919
Ran for 110050 frames Cell Events: 3914 mean_circ: 0.949852
Ran for 110550 frames Cell Events: 3943 mean_circ: 0.949869
Ran for 111050 frames Cell Events: 3959 mean_circ: 0.94989
Ran for 112550 frames Cell Events: 4030 mean_circ: 0.94995
Ran for 113050 frames Cell Events: 4054 mean_circ: 0.949945
Ran for 113550 frames Cell Events: 4066 mean_circ: 0.949921
Ran for 114050 frames Cell Events: 4084 mean_circ: 0.949932
Ran for 114550 frames Cell Events: 4098 mean_circ: 0.949922
Ran for 115050 frames Cell Events: 4124 mean_circ: 0.949906
Ran for 115550 frames Cell Events: 4140 mean_circ: 0.949923
Ran for 116050 frames Cell Events: 4148 mean_circ: 0.949955
Ran for 116550 frames Cell Events: 4163 mean_circ: 0.949953
Ran for 117050 frames Cell Events: 4178 mean_circ: 0.950001
Ran for 117550 frames Cell Events: 4193 mean_circ: 0.949983
Ran for 118050 frames Cell Events: 4210 mean_circ: 0.950014
Ran for 118550 frames Cell Events: 4225 mean_circ: 0.949981
Ran for 119050 frames Cell Events: 4235 mean_circ: 0.949999
Ran for 119550 frames Cell Events: 4251 mean_circ: 0.949957
Ran for 120550 frames Cell Events: 4286 mean_circ: 0.949973
Ran for 121050 frames Cell Events: 4305 mean_circ: 0.949976
Ran for 121550 frames Cell Events: 4321 mean_circ: 0.94995
Ran for 122550 frames Cell Events: 4362 mean_circ: 0.949924
Ran for 123050 frames Cell Events: 4383 mean_circ: 0.949935
Ran for 123550 frames Cell Events: 4398 mean_circ: 0.949939
Ran for 124050 frames Cell Events: 4423 mean_circ: 0.94993
Ran for 125050 frames Cell Events: 4469 mean_circ: 0.95
Ran for 125550 frames Cell Events: 4491 mean_circ: 0.949994
Ran for 126050 frames Cell Events: 4502 mean_circ: 0.950003
Ran for 127050 frames Cell Events: 4537 mean_circ: 0.949971
Ran for 127550 frames Cell Events: 4557 mean_circ: 0.949979
Ran for 128050 frames Cell Events: 4566 mean_circ: 0.949985
Ran for 129050 frames Cell Events: 4600 mean_circ: 0.949989
Ran for 129550 frames Cell Events: 4612 mean_circ: 0.950026
Ran for 130050 frames Cell Events: 4632 mean_circ: 0.950008
Ran for 130550 frames Cell Events: 4647 mean_circ: 0.950071
Ran for 132550 frames Cell Events: 4700 mean_circ: 0.950048
Ran for 133050 frames Cell Events: 4712 mean_circ: 0.95007
Ran for 133550 frames Cell Events: 4721 mean_circ: 0.950104
Ran for 134050 frames Cell Events: 4740 mean_circ: 0.950111
Ran for 134550 frames Cell Events: 4763 mean_circ: 0.950112
Ran for 135050 frames Cell Events: 4779 mean_circ: 0.950129
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Ran for 141550 frames Cell Events: 5014 mean_circ: 0.950238
Ran for 142550 frames Cell Events: 5062 mean_circ: 0.950187
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Ran for 146550 frames Cell Events: 5204 mean_circ: 0.950042
Ran for 148050 frames Cell Events: 5253 mean_circ: 0.950051
Ran for 148550 frames Cell Events: 5284 mean_circ: 0.950102
Ran for 149050 frames Cell Events: 5302 mean_circ: 0.950106
Ran for 149550 frames Cell Events: 5314 mean_circ: 0.950103
Ran for 150050 frames Cell Events: 5335 mean_circ: 0.950074
Ran for 150550 frames Cell Events: 5358 mean_circ: 0.950106
Ran for 151550 frames Cell Events: 5413 mean_circ: 0.950022
Ran for 153550 frames Cell Events: 5507 mean_circ: 0.950024
Ran for 154050 frames Cell Events: 5520 mean_circ: 0.950034
Ran for 155050 frames Cell Events: 5555 mean_circ: 0.950016
Ran for 155550 frames Cell Events: 5574 mean_circ: 0.950026
Ran for 156050 frames Cell Events: 5589 mean_circ: 0.950036
Ran for 156550 frames Cell Events: 5597 mean_circ: 0.950057
Ran for 157550 frames Cell Events: 5625 mean_circ: 0.950072
Ran for 159050 frames Cell Events: 5681 mean_circ: 0.949958
Ran for 159550 frames Cell Events: 5700 mean_circ: 0.949998
Ran for 160050 frames Cell Events: 5716 mean_circ: 0.95002
Ran for 160550 frames Cell Events: 5731 mean_circ: 0.950019
Ran for 161050 frames Cell Events: 5745 mean_circ: 0.950013
Ran for 161550 frames Cell Events: 5767 mean_circ: 0.950029
Ran for 163050 frames Cell Events: 5815 mean_circ: 0.950046
Ran for 163550 frames Cell Events: 5839 mean_circ: 0.950068
Ran for 164550 frames Cell Events: 5880 mean_circ: 0.950075
Ran for 165550 frames Cell Events: 5908 mean_circ: 0.9501
Ran for 166050 frames Cell Events: 5919 mean_circ: 0.950108
Ran for 166550 frames Cell Events: 5939 mean_circ: 0.950103
Ran for 167550 frames Cell Events: 5970 mean_circ: 0.950139
Ran for 168050 frames Cell Events: 5984 mean_circ: 0.950154
Ran for 169050 frames Cell Events: 6007 mean_circ: 0.950201
Ran for 169550 frames Cell Events: 6022 mean_circ: 0.950198
Ran for 171550 frames Cell Events: 6115 mean_circ: 0.950229
Ran for 173050 frames Cell Events: 6177 mean_circ: 0.950279
Ran for 173550 frames Cell Events: 6190 mean_circ: 0.950277
Ran for 174050 frames Cell Events: 6203 mean_circ: 0.950296
Ran for 174550 frames Cell Events: 6216 mean_circ: 0.950305
Ran for 175550 frames Cell Events: 6250 mean_circ: 0.950336
Ran for 176050 frames Cell Events: 6270 mean_circ: 0.950321
Ran for 176550 frames Cell Events: 6289 mean_circ: 0.950323
Ran for 177050 frames Cell Events: 6304 mean_circ: 0.950341
Ran for 178550 frames Cell Events: 6353 mean_circ: 0.950302
Ran for 179050 frames Cell Events: 6375 mean_circ: 0.950328
Ran for 179550 frames Cell Events: 6392 mean_circ: 0.950351
Ran for 180050 frames Cell Events: 6405 mean_circ: 0.950345
Ran for 180550 frames Cell Events: 6426 mean_circ: 0.950323
Ran for 181550 frames Cell Events: 6460 mean_circ: 0.950261
Ran for 182550 frames Cell Events: 6504 mean_circ: 0.950251
Ran for 185050 frames Cell Events: 6601 mean_circ: 0.950273
Ran for 185550 frames Cell Events: 6619 mean_circ: 0.950253
Ran for 186050 frames Cell Events: 6630 mean_circ: 0.950233
Ran for 187050 frames Cell Events: 6662 mean_circ: 0.950197
Ran for 187550 frames Cell Events: 6676 mean_circ: 0.950216
Ran for 188050 frames Cell Events: 6707 mean_circ: 0.95022
Ran for 188550 frames Cell Events: 6725 mean_circ: 0.950225
Ran for 189050 frames Cell Events: 6741 mean_circ: 0.950232
Ran for 189550 frames Cell Events: 6766 mean_circ: 0.950226
Ran for 192050 frames Cell Events: 6866 mean_circ: 0.950268
Ran for 193050 frames Cell Events: 6914 mean_circ: 0.950276
Ran for 193550 frames Cell Events: 6949 mean_circ: 0.950229
Ran for 194050 frames Cell Events: 6967 mean_circ: 0.950255
Ran for 195550 frames Cell Events: 7066 mean_circ: 0.950314
Ran for 197050 frames Cell Events: 7185 mean_circ: 0.950132
Ran for 197550 frames Cell Events: 7211 mean_circ: 0.950104
Ran for 198050 frames Cell Events: 7231 mean_circ: 0.950116
Ran for 198550 frames Cell Events: 7248 mean_circ: 0.950123
Ran for 201550 frames Cell Events: 7382 mean_circ: 0.950138
Ran for 202050 frames Cell Events: 7393 mean_circ: 0.950167
Ran for 202550 frames Cell Events: 7412 mean_circ: 0.950163
Ran for 203050 frames Cell Events: 7434 mean_circ: 0.95014
Ran for 203550 frames Cell Events: 7456 mean_circ: 0.950139
Ran for 204050 frames Cell Events: 7485 mean_circ: 0.95015
Ran for 204550 frames Cell Events: 7510 mean_circ: 0.950168
Ran for 206050 frames Cell Events: 7569 mean_circ: 0.95019
Ran for 206550 frames Cell Events: 7594 mean_circ: 0.950158
Ran for 207050 frames Cell Events: 7612 mean_circ: 0.950187
Ran for 207550 frames Cell Events: 7627 mean_circ: 0.950217
Ran for 208050 frames Cell Events: 7645 mean_circ: 0.950245
Ran for 208550 frames Cell Events: 7664 mean_circ: 0.950245
Ran for 209050 frames Cell Events: 7688 mean_circ: 0.950282
Ran for 209550 frames Cell Events: 7703 mean_circ: 0.950297
Ran for 210050 frames Cell Events: 7721 mean_circ: 0.950295
Ran for 210550 frames Cell Events: 7731 mean_circ: 0.950299
Ran for 211550 frames Cell Events: 7767 mean_circ: 0.950293
Ran for 212050 frames Cell Events: 7787 mean_circ: 0.95031
Ran for 212550 frames Cell Events: 7799 mean_circ: 0.950317
Ran for 214050 frames Cell Events: 7854 mean_circ: 0.950364
Ran for 215050 frames Cell Events: 7872 mean_circ: 0.950383
Ran for 215550 frames Cell Events: 7889 mean_circ: 0.950357
Ran for 216550 frames Cell Events: 7933 mean_circ: 0.950356
Ran for 217550 frames Cell Events: 7968 mean_circ: 0.95038
Ran for 218050 frames Cell Events: 7993 mean_circ: 0.950379
Ran for 219050 frames Cell Events: 8022 mean_circ: 0.950412
End this measurment..
Stopping time: 1.85051e+009
****************************************
Measurement finished
Mean Circularitiy: 0.950389
Mean Area: 602.928
Mean FL-1 intensity: 3396.07
Mean FL-2 intensity: 3792.73
Mean FL-3 intensity: 0
frames processed: 218245
Total Time: 109847ms
Number of Runs (new bg img) 0
Frames collected: 219545
Skipped frames: 39359
Rescued Frames: 2150434
Samples DAQ: 54886401
Samples written: 109772548
Samples per Channel: 54886274
FPS: 1998.64
Samples per second: 499660
Expected samples/s: 500000
Events: 8031
Events per second: 73.1107
jumped back (PMT): 5135
#Frames read, frequency
# 0 frames :302563
# 1 frames :120184
# 2 frames :4555
# 3 frames :1436
# 4 frames :797
# 5 frames :2051
# 6 frames :2126
# 7 frames :1413
# 8 frames :737
# 9 frames :470
# 10 frames :523
# 11 frames :419
# 12 frames :382
# 13 frames :284
# 14 frames :217
# 15 frames :164
# 16 frames :146
# 17 frames :132
# 18 frames :101
# 19 frames :82
# 20 frames :53
# 21 frames :40
# 22 frames :34
# 23 frames :18
# 24 frames :20
# 25 frames :20
# 26 frames :12
# 27 frames :15
# 28 frames :13
# 29 frames :7
# 30 frames :5
# 31 frames :6
# 32 frames :7
# 33 frames :6
# 34 frames :4
# 35 frames :5
# 36 frames :1
# 38 frames :1
# 39 frames :1
# 40 frames :2
# 42 frames :1
# 43 frames :2
# 46 frames :1
# 47 frames :1
# 49 frames :1
# 51 frames :1
# 59 frames :1
# 66 frames :1
# 72 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6413
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0