Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.36.20
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "1c29137ba54b725957462307cb20e718",
"name": "M1_20170605_2023_dsRNA_K4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:36:41"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8685 (max 8686) in '8685'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7001
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.85761e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 17 mean_circ: 0.96072
Ran for 1550 frames Cell Events: 37 mean_circ: 0.948732
Ran for 2050 frames Cell Events: 55 mean_circ: 0.951096
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Ran for 3050 frames Cell Events: 73 mean_circ: 0.949929
Ran for 4550 frames Cell Events: 103 mean_circ: 0.950712
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Ran for 7050 frames Cell Events: 161 mean_circ: 0.950408
Ran for 8050 frames Cell Events: 189 mean_circ: 0.949489
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Ran for 74050 frames Cell Events: 1857 mean_circ: 0.942296
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Ran for 75050 frames Cell Events: 1885 mean_circ: 0.942215
Ran for 75550 frames Cell Events: 1894 mean_circ: 0.942206
Ran for 76050 frames Cell Events: 1899 mean_circ: 0.942207
Ran for 79050 frames Cell Events: 1982 mean_circ: 0.942134
Ran for 79550 frames Cell Events: 1989 mean_circ: 0.942174
Ran for 80050 frames Cell Events: 2001 mean_circ: 0.942167
Ran for 80550 frames Cell Events: 2007 mean_circ: 0.942167
Ran for 81050 frames Cell Events: 2019 mean_circ: 0.942154
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Ran for 86550 frames Cell Events: 2156 mean_circ: 0.942412
Ran for 87050 frames Cell Events: 2169 mean_circ: 0.94249
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Ran for 91550 frames Cell Events: 2289 mean_circ: 0.942317
Ran for 92050 frames Cell Events: 2307 mean_circ: 0.942347
Ran for 92550 frames Cell Events: 2312 mean_circ: 0.942404
Ran for 93550 frames Cell Events: 2341 mean_circ: 0.94228
Ran for 95550 frames Cell Events: 2387 mean_circ: 0.942308
Ran for 96050 frames Cell Events: 2395 mean_circ: 0.942345
Ran for 97050 frames Cell Events: 2433 mean_circ: 0.94215
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Ran for 103550 frames Cell Events: 2611 mean_circ: 0.942331
Ran for 104050 frames Cell Events: 2622 mean_circ: 0.942278
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Ran for 106550 frames Cell Events: 2685 mean_circ: 0.942302
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Ran for 116050 frames Cell Events: 2957 mean_circ: 0.942606
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Ran for 118050 frames Cell Events: 3008 mean_circ: 0.942497
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Ran for 120050 frames Cell Events: 3050 mean_circ: 0.942575
Ran for 120550 frames Cell Events: 3062 mean_circ: 0.942567
Ran for 121550 frames Cell Events: 3090 mean_circ: 0.942523
Ran for 123050 frames Cell Events: 3121 mean_circ: 0.942547
Ran for 123550 frames Cell Events: 3132 mean_circ: 0.942567
Ran for 124550 frames Cell Events: 3153 mean_circ: 0.942592
Ran for 125050 frames Cell Events: 3162 mean_circ: 0.942589
Ran for 125550 frames Cell Events: 3175 mean_circ: 0.942654
Ran for 126050 frames Cell Events: 3185 mean_circ: 0.942676
Ran for 126550 frames Cell Events: 3194 mean_circ: 0.942718
Ran for 127050 frames Cell Events: 3209 mean_circ: 0.942792
Ran for 127550 frames Cell Events: 3220 mean_circ: 0.942749
Ran for 128050 frames Cell Events: 3236 mean_circ: 0.942776
Ran for 128550 frames Cell Events: 3246 mean_circ: 0.942745
Ran for 129550 frames Cell Events: 3265 mean_circ: 0.942783
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Ran for 131550 frames Cell Events: 3310 mean_circ: 0.942762
Ran for 132050 frames Cell Events: 3325 mean_circ: 0.942767
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Ran for 133050 frames Cell Events: 3350 mean_circ: 0.942706
Ran for 134050 frames Cell Events: 3378 mean_circ: 0.942816
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Ran for 152050 frames Cell Events: 3833 mean_circ: 0.942773
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Ran for 167050 frames Cell Events: 4243 mean_circ: 0.942826
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Ran for 172050 frames Cell Events: 4350 mean_circ: 0.942806
Ran for 173050 frames Cell Events: 4380 mean_circ: 0.942829
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Ran for 182050 frames Cell Events: 4647 mean_circ: 0.942529
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Ran for 185050 frames Cell Events: 4715 mean_circ: 0.942659
Ran for 185550 frames Cell Events: 4733 mean_circ: 0.942659
Ran for 186050 frames Cell Events: 4758 mean_circ: 0.942527
Ran for 186550 frames Cell Events: 4770 mean_circ: 0.942548
Ran for 187050 frames Cell Events: 4785 mean_circ: 0.942564
Ran for 187550 frames Cell Events: 4804 mean_circ: 0.942629
Ran for 188050 frames Cell Events: 4813 mean_circ: 0.942651
Ran for 188550 frames Cell Events: 4820 mean_circ: 0.942624
Ran for 189050 frames Cell Events: 4832 mean_circ: 0.942649
Ran for 191550 frames Cell Events: 4909 mean_circ: 0.942824
Ran for 192550 frames Cell Events: 4946 mean_circ: 0.942841
Ran for 193050 frames Cell Events: 4955 mean_circ: 0.942866
Ran for 193550 frames Cell Events: 4967 mean_circ: 0.942799
Ran for 194050 frames Cell Events: 4981 mean_circ: 0.942746
Ran for 194550 frames Cell Events: 4991 mean_circ: 0.942729
Ran for 195050 frames Cell Events: 5001 mean_circ: 0.942728
Ran for 195550 frames Cell Events: 5020 mean_circ: 0.942708
Ran for 196050 frames Cell Events: 5028 mean_circ: 0.942657
Ran for 196550 frames Cell Events: 5042 mean_circ: 0.942661
Ran for 197050 frames Cell Events: 5048 mean_circ: 0.942643
Ran for 197550 frames Cell Events: 5061 mean_circ: 0.942674
Ran for 198550 frames Cell Events: 5095 mean_circ: 0.942704
Ran for 199050 frames Cell Events: 5112 mean_circ: 0.942674
Ran for 199550 frames Cell Events: 5123 mean_circ: 0.942646
Ran for 200550 frames Cell Events: 5138 mean_circ: 0.9427
Ran for 201050 frames Cell Events: 5151 mean_circ: 0.942684
Ran for 201550 frames Cell Events: 5163 mean_circ: 0.942703
Ran for 202050 frames Cell Events: 5172 mean_circ: 0.942685
Ran for 202550 frames Cell Events: 5179 mean_circ: 0.942676
Ran for 203050 frames Cell Events: 5184 mean_circ: 0.942671
Ran for 203550 frames Cell Events: 5197 mean_circ: 0.942713
Ran for 204550 frames Cell Events: 5236 mean_circ: 0.942792
Ran for 205050 frames Cell Events: 5251 mean_circ: 0.942798
Ran for 207050 frames Cell Events: 5288 mean_circ: 0.942709
Ran for 208550 frames Cell Events: 5325 mean_circ: 0.942824
Ran for 209050 frames Cell Events: 5332 mean_circ: 0.942836
Ran for 209550 frames Cell Events: 5344 mean_circ: 0.942844
Ran for 210550 frames Cell Events: 5364 mean_circ: 0.942839
Ran for 211050 frames Cell Events: 5381 mean_circ: 0.942885
Ran for 211550 frames Cell Events: 5400 mean_circ: 0.942922
Ran for 212050 frames Cell Events: 5407 mean_circ: 0.942912
Ran for 212550 frames Cell Events: 5416 mean_circ: 0.942884
Ran for 213550 frames Cell Events: 5439 mean_circ: 0.942878
Ran for 214050 frames Cell Events: 5456 mean_circ: 0.942887
Ran for 214550 frames Cell Events: 5476 mean_circ: 0.942934
Ran for 215050 frames Cell Events: 5498 mean_circ: 0.942916
Ran for 215550 frames Cell Events: 5516 mean_circ: 0.94291
Ran for 216050 frames Cell Events: 5528 mean_circ: 0.942917
Ran for 216550 frames Cell Events: 5543 mean_circ: 0.942936
Ran for 217050 frames Cell Events: 5563 mean_circ: 0.942934
Ran for 217550 frames Cell Events: 5574 mean_circ: 0.942926
Ran for 218050 frames Cell Events: 5588 mean_circ: 0.942916
Ran for 219550 frames Cell Events: 5638 mean_circ: 0.942903
Ran for 220050 frames Cell Events: 5646 mean_circ: 0.942918
Ran for 220550 frames Cell Events: 5663 mean_circ: 0.942893
Ran for 221050 frames Cell Events: 5672 mean_circ: 0.942903
Ran for 222550 frames Cell Events: 5717 mean_circ: 0.942951
Ran for 223550 frames Cell Events: 5745 mean_circ: 0.942981
Ran for 224050 frames Cell Events: 5749 mean_circ: 0.942981
Ran for 225050 frames Cell Events: 5775 mean_circ: 0.94294
Ran for 225550 frames Cell Events: 5785 mean_circ: 0.942944
Ran for 226050 frames Cell Events: 5794 mean_circ: 0.942943
Ran for 226550 frames Cell Events: 5800 mean_circ: 0.94289
Ran for 227050 frames Cell Events: 5809 mean_circ: 0.942888
Ran for 227550 frames Cell Events: 5828 mean_circ: 0.94291
Ran for 229550 frames Cell Events: 5892 mean_circ: 0.942857
Ran for 230050 frames Cell Events: 5905 mean_circ: 0.942884
Ran for 230550 frames Cell Events: 5920 mean_circ: 0.9429
Ran for 231050 frames Cell Events: 5930 mean_circ: 0.942892
Ran for 231550 frames Cell Events: 5939 mean_circ: 0.942895
Ran for 233050 frames Cell Events: 5974 mean_circ: 0.942934
Ran for 233550 frames Cell Events: 5981 mean_circ: 0.94296
Ran for 235050 frames Cell Events: 6017 mean_circ: 0.942903
Ran for 235550 frames Cell Events: 6030 mean_circ: 0.942922
Ran for 236050 frames Cell Events: 6043 mean_circ: 0.942953
Ran for 236550 frames Cell Events: 6064 mean_circ: 0.942965
Ran for 237050 frames Cell Events: 6074 mean_circ: 0.942958
Ran for 237550 frames Cell Events: 6088 mean_circ: 0.942951
Ran for 238050 frames Cell Events: 6102 mean_circ: 0.942919
Ran for 238550 frames Cell Events: 6112 mean_circ: 0.942895
Ran for 239050 frames Cell Events: 6122 mean_circ: 0.942894
Ran for 239550 frames Cell Events: 6142 mean_circ: 0.942881
Ran for 240050 frames Cell Events: 6148 mean_circ: 0.942908
Ran for 240550 frames Cell Events: 6165 mean_circ: 0.942882
Ran for 241050 frames Cell Events: 6174 mean_circ: 0.942875
Ran for 241550 frames Cell Events: 6186 mean_circ: 0.942877
Ran for 242550 frames Cell Events: 6220 mean_circ: 0.942776
Ran for 243050 frames Cell Events: 6234 mean_circ: 0.942752
Ran for 243550 frames Cell Events: 6250 mean_circ: 0.942734
Ran for 244050 frames Cell Events: 6265 mean_circ: 0.942683
Ran for 246050 frames Cell Events: 6309 mean_circ: 0.942648
Ran for 246550 frames Cell Events: 6318 mean_circ: 0.942658
Ran for 247050 frames Cell Events: 6332 mean_circ: 0.942691
Ran for 247550 frames Cell Events: 6346 mean_circ: 0.942731
Ran for 248050 frames Cell Events: 6355 mean_circ: 0.942735
Ran for 249050 frames Cell Events: 6379 mean_circ: 0.942683
Ran for 249550 frames Cell Events: 6382 mean_circ: 0.942691
Ran for 250550 frames Cell Events: 6401 mean_circ: 0.942684
Ran for 251050 frames Cell Events: 6416 mean_circ: 0.94271
Ran for 251550 frames Cell Events: 6430 mean_circ: 0.942672
Ran for 252550 frames Cell Events: 6452 mean_circ: 0.94258
Ran for 253050 frames Cell Events: 6466 mean_circ: 0.942585
Ran for 253550 frames Cell Events: 6476 mean_circ: 0.942562
Ran for 254050 frames Cell Events: 6488 mean_circ: 0.942549
Ran for 254550 frames Cell Events: 6495 mean_circ: 0.942531
Ran for 255050 frames Cell Events: 6510 mean_circ: 0.942543
Ran for 255550 frames Cell Events: 6520 mean_circ: 0.942568
Ran for 256050 frames Cell Events: 6528 mean_circ: 0.942537
Ran for 257050 frames Cell Events: 6552 mean_circ: 0.942558
Ran for 258050 frames Cell Events: 6574 mean_circ: 0.942588
Ran for 258550 frames Cell Events: 6594 mean_circ: 0.9425
Ran for 259050 frames Cell Events: 6605 mean_circ: 0.942461
Ran for 260550 frames Cell Events: 6629 mean_circ: 0.942462
Ran for 261050 frames Cell Events: 6645 mean_circ: 0.942428
Ran for 261550 frames Cell Events: 6652 mean_circ: 0.942429
Ran for 262050 frames Cell Events: 6670 mean_circ: 0.942451
Ran for 262550 frames Cell Events: 6678 mean_circ: 0.94245
Ran for 263050 frames Cell Events: 6692 mean_circ: 0.942482
Ran for 264550 frames Cell Events: 6732 mean_circ: 0.94251
Ran for 265050 frames Cell Events: 6742 mean_circ: 0.942519
Ran for 265550 frames Cell Events: 6751 mean_circ: 0.942478
Ran for 266050 frames Cell Events: 6758 mean_circ: 0.942499
Ran for 266550 frames Cell Events: 6770 mean_circ: 0.942513
Ran for 267050 frames Cell Events: 6780 mean_circ: 0.942515
Ran for 267550 frames Cell Events: 6789 mean_circ: 0.94252
Ran for 268550 frames Cell Events: 6818 mean_circ: 0.942531
Ran for 269050 frames Cell Events: 6830 mean_circ: 0.942538
Ran for 269550 frames Cell Events: 6837 mean_circ: 0.942562
Ran for 270550 frames Cell Events: 6865 mean_circ: 0.942559
Ran for 271550 frames Cell Events: 6906 mean_circ: 0.94257
Ran for 272550 frames Cell Events: 6932 mean_circ: 0.942614
Ran for 273050 frames Cell Events: 6939 mean_circ: 0.942624
Ran for 273550 frames Cell Events: 6956 mean_circ: 0.942638
Ran for 274550 frames Cell Events: 6980 mean_circ: 0.942667
Ran for 275550 frames Cell Events: 7008 mean_circ: 0.942649
Ran for 276550 frames Cell Events: 7036 mean_circ: 0.942659
Ran for 277050 frames Cell Events: 7049 mean_circ: 0.942655
Ran for 278050 frames Cell Events: 7079 mean_circ: 0.942593
Ran for 279050 frames Cell Events: 7109 mean_circ: 0.942603
Ran for 279550 frames Cell Events: 7124 mean_circ: 0.942633
Ran for 280050 frames Cell Events: 7134 mean_circ: 0.942652
Ran for 280550 frames Cell Events: 7147 mean_circ: 0.942657
Ran for 281050 frames Cell Events: 7159 mean_circ: 0.942685
Ran for 281550 frames Cell Events: 7176 mean_circ: 0.942685
Ran for 282050 frames Cell Events: 7188 mean_circ: 0.942651
Ran for 282550 frames Cell Events: 7197 mean_circ: 0.942642
Ran for 283050 frames Cell Events: 7214 mean_circ: 0.942611
Ran for 284050 frames Cell Events: 7244 mean_circ: 0.94264
Ran for 284550 frames Cell Events: 7254 mean_circ: 0.942665
Ran for 285050 frames Cell Events: 7262 mean_circ: 0.942677
Ran for 285550 frames Cell Events: 7276 mean_circ: 0.94267
Ran for 286550 frames Cell Events: 7300 mean_circ: 0.942675
Ran for 287050 frames Cell Events: 7310 mean_circ: 0.942702
Ran for 287550 frames Cell Events: 7327 mean_circ: 0.942736
Ran for 290050 frames Cell Events: 7400 mean_circ: 0.942715
Ran for 290550 frames Cell Events: 7417 mean_circ: 0.942688
Ran for 291050 frames Cell Events: 7425 mean_circ: 0.942695
Ran for 291550 frames Cell Events: 7440 mean_circ: 0.942702
Ran for 292050 frames Cell Events: 7458 mean_circ: 0.942668
Ran for 292550 frames Cell Events: 7467 mean_circ: 0.942681
Ran for 293050 frames Cell Events: 7476 mean_circ: 0.942703
Ran for 293550 frames Cell Events: 7491 mean_circ: 0.942703
Ran for 294550 frames Cell Events: 7529 mean_circ: 0.942732
Ran for 295050 frames Cell Events: 7543 mean_circ: 0.942753
Ran for 295550 frames Cell Events: 7557 mean_circ: 0.942774
Ran for 296050 frames Cell Events: 7580 mean_circ: 0.942707
Ran for 296550 frames Cell Events: 7591 mean_circ: 0.942711
Ran for 297050 frames Cell Events: 7599 mean_circ: 0.942728
Ran for 297550 frames Cell Events: 7620 mean_circ: 0.942724
Ran for 298050 frames Cell Events: 7632 mean_circ: 0.942688
Ran for 298550 frames Cell Events: 7644 mean_circ: 0.942687
Ran for 299050 frames Cell Events: 7659 mean_circ: 0.942672
Ran for 300050 frames Cell Events: 7692 mean_circ: 0.94268
Ran for 300550 frames Cell Events: 7707 mean_circ: 0.942663
Ran for 301050 frames Cell Events: 7720 mean_circ: 0.942673
Ran for 301550 frames Cell Events: 7738 mean_circ: 0.942682
Ran for 302550 frames Cell Events: 7770 mean_circ: 0.942703
Ran for 303050 frames Cell Events: 7787 mean_circ: 0.942685
Ran for 303550 frames Cell Events: 7798 mean_circ: 0.942673
Ran for 305550 frames Cell Events: 7863 mean_circ: 0.942705
Ran for 306050 frames Cell Events: 7876 mean_circ: 0.942716
Ran for 306550 frames Cell Events: 7896 mean_circ: 0.942665
Ran for 307050 frames Cell Events: 7923 mean_circ: 0.942629
Ran for 307550 frames Cell Events: 7939 mean_circ: 0.942612
Ran for 308550 frames Cell Events: 7979 mean_circ: 0.942682
Ran for 309050 frames Cell Events: 7989 mean_circ: 0.942664
Ran for 309550 frames Cell Events: 7998 mean_circ: 0.942667
Ran for 310050 frames Cell Events: 8012 mean_circ: 0.942685
Ran for 310550 frames Cell Events: 8030 mean_circ: 0.942685
Ran for 311550 frames Cell Events: 8064 mean_circ: 0.942724
Ran for 312550 frames Cell Events: 8094 mean_circ: 0.942739
Ran for 313050 frames Cell Events: 8108 mean_circ: 0.94271
Ran for 314050 frames Cell Events: 8138 mean_circ: 0.942736
Ran for 315050 frames Cell Events: 8169 mean_circ: 0.942752
Ran for 315550 frames Cell Events: 8182 mean_circ: 0.942765
Ran for 316050 frames Cell Events: 8197 mean_circ: 0.942765
Ran for 316550 frames Cell Events: 8218 mean_circ: 0.942778
Ran for 317050 frames Cell Events: 8232 mean_circ: 0.942786
Ran for 317550 frames Cell Events: 8243 mean_circ: 0.942786
Ran for 318050 frames Cell Events: 8268 mean_circ: 0.942809
Ran for 318550 frames Cell Events: 8283 mean_circ: 0.94282
Ran for 319550 frames Cell Events: 8314 mean_circ: 0.942757
Ran for 320550 frames Cell Events: 8339 mean_circ: 0.942716
Ran for 321050 frames Cell Events: 8352 mean_circ: 0.942732
Ran for 322050 frames Cell Events: 8381 mean_circ: 0.942693
Ran for 323050 frames Cell Events: 8405 mean_circ: 0.942718
Ran for 323550 frames Cell Events: 8421 mean_circ: 0.942691
Ran for 324550 frames Cell Events: 8471 mean_circ: 0.942704
Ran for 325050 frames Cell Events: 8493 mean_circ: 0.94269
Ran for 325550 frames Cell Events: 8512 mean_circ: 0.942696
Ran for 327050 frames Cell Events: 8578 mean_circ: 0.942765
Ran for 329050 frames Cell Events: 8620 mean_circ: 0.942641
Ran for 330050 frames Cell Events: 8663 mean_circ: 0.942664
Ran for 330550 frames Cell Events: 8674 mean_circ: 0.942624
End this measurment..
Stopping time: 1.85777e+009
****************************************
Measurement finished
Mean Circularitiy: 0.942625
Mean Area: 634.565
Mean FL-1 intensity: 3223.5
Mean FL-2 intensity: 4282.67
Mean FL-3 intensity: 0
frames processed: 327504
Total Time: 165492ms
Number of Runs (new bg img) 0
Frames collected: 330811
Skipped frames: 79387
Rescued Frames: 3927857
Samples DAQ: 82705004
Samples written: 165405596
Samples per Channel: 82702798
FPS: 1998.96
Samples per second: 499740
Expected samples/s: 500000
Events: 8686
Events per second: 52.486
jumped back (PMT): 5523
#Frames read, frequency
# 0 frames :453119
# 1 frames :186970
# 2 frames :5866
# 3 frames :2395
# 4 frames :1363
# 5 frames :1503
# 6 frames :2239
# 7 frames :1851
# 8 frames :1129
# 9 frames :816
# 10 frames :653
# 11 frames :601
# 12 frames :499
# 13 frames :409
# 14 frames :298
# 15 frames :258
# 16 frames :247
# 17 frames :216
# 18 frames :186
# 19 frames :177
# 20 frames :149
# 21 frames :94
# 22 frames :91
# 23 frames :65
# 24 frames :64
# 25 frames :40
# 26 frames :49
# 27 frames :31
# 28 frames :33
# 29 frames :46
# 30 frames :23
# 31 frames :16
# 32 frames :8
# 33 frames :10
# 34 frames :5
# 35 frames :5
# 36 frames :6
# 37 frames :7
# 38 frames :4
# 39 frames :3
# 41 frames :3
# 42 frames :3
# 43 frames :2
# 44 frames :3
# 45 frames :2
# 47 frames :3
# 48 frames :2
# 49 frames :1
# 54 frames :1
# 56 frames :1
# 67 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7001
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0