Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.38.12
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "16e0e9219b6fdce57b5a70ce631b327e",
"name": "M1_20170606_1357_dsRNA_N1_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:38:33"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8681 (max 8682) in '8681'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.5623
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.92084e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 29 mean_circ: 0.915733
Ran for 1550 frames Cell Events: 39 mean_circ: 0.914069
Ran for 2050 frames Cell Events: 59 mean_circ: 0.921497
Ran for 2550 frames Cell Events: 70 mean_circ: 0.926389
Ran for 3050 frames Cell Events: 82 mean_circ: 0.92866
Ran for 4550 frames Cell Events: 113 mean_circ: 0.926756
Ran for 5050 frames Cell Events: 126 mean_circ: 0.919407
Ran for 5550 frames Cell Events: 137 mean_circ: 0.920923
Ran for 6050 frames Cell Events: 151 mean_circ: 0.922769
Ran for 6550 frames Cell Events: 157 mean_circ: 0.922456
Ran for 7050 frames Cell Events: 171 mean_circ: 0.922009
Ran for 7550 frames Cell Events: 183 mean_circ: 0.91961
Ran for 8050 frames Cell Events: 196 mean_circ: 0.919425
Ran for 8550 frames Cell Events: 203 mean_circ: 0.91988
Ran for 9050 frames Cell Events: 212 mean_circ: 0.920418
Ran for 9550 frames Cell Events: 221 mean_circ: 0.919617
Ran for 10050 frames Cell Events: 238 mean_circ: 0.920526
Ran for 10550 frames Cell Events: 248 mean_circ: 0.920091
Ran for 11050 frames Cell Events: 254 mean_circ: 0.917954
Ran for 12050 frames Cell Events: 278 mean_circ: 0.920975
Ran for 12550 frames Cell Events: 287 mean_circ: 0.922255
Ran for 13050 frames Cell Events: 303 mean_circ: 0.923208
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Ran for 14050 frames Cell Events: 326 mean_circ: 0.921358
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Ran for 18050 frames Cell Events: 397 mean_circ: 0.920027
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Ran for 20050 frames Cell Events: 465 mean_circ: 0.921506
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Ran for 28550 frames Cell Events: 627 mean_circ: 0.923203
Ran for 29050 frames Cell Events: 638 mean_circ: 0.922778
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Ran for 32050 frames Cell Events: 692 mean_circ: 0.923781
Ran for 33050 frames Cell Events: 721 mean_circ: 0.924501
Ran for 34050 frames Cell Events: 738 mean_circ: 0.924598
Ran for 34550 frames Cell Events: 754 mean_circ: 0.925022
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Ran for 36050 frames Cell Events: 793 mean_circ: 0.923842
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Ran for 37050 frames Cell Events: 804 mean_circ: 0.923739
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Ran for 39550 frames Cell Events: 863 mean_circ: 0.924047
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Ran for 48050 frames Cell Events: 1088 mean_circ: 0.924457
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Ran for 55050 frames Cell Events: 1279 mean_circ: 0.924732
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Ran for 63050 frames Cell Events: 1460 mean_circ: 0.923446
Ran for 63550 frames Cell Events: 1470 mean_circ: 0.923169
Ran for 64550 frames Cell Events: 1495 mean_circ: 0.923432
Ran for 65050 frames Cell Events: 1505 mean_circ: 0.923519
Ran for 65550 frames Cell Events: 1520 mean_circ: 0.923661
Ran for 66550 frames Cell Events: 1535 mean_circ: 0.923322
Ran for 67050 frames Cell Events: 1545 mean_circ: 0.923161
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Ran for 68050 frames Cell Events: 1578 mean_circ: 0.92316
Ran for 69050 frames Cell Events: 1605 mean_circ: 0.923148
Ran for 69550 frames Cell Events: 1618 mean_circ: 0.92341
Ran for 70050 frames Cell Events: 1629 mean_circ: 0.923419
Ran for 70550 frames Cell Events: 1644 mean_circ: 0.923453
Ran for 71050 frames Cell Events: 1657 mean_circ: 0.923675
Ran for 71550 frames Cell Events: 1668 mean_circ: 0.923517
Ran for 72050 frames Cell Events: 1678 mean_circ: 0.923352
Ran for 72550 frames Cell Events: 1694 mean_circ: 0.923392
Ran for 73050 frames Cell Events: 1706 mean_circ: 0.923532
Ran for 74050 frames Cell Events: 1727 mean_circ: 0.923727
Ran for 74550 frames Cell Events: 1741 mean_circ: 0.923795
Ran for 75050 frames Cell Events: 1747 mean_circ: 0.923734
Ran for 75550 frames Cell Events: 1753 mean_circ: 0.923768
Ran for 76050 frames Cell Events: 1766 mean_circ: 0.923779
Ran for 76550 frames Cell Events: 1775 mean_circ: 0.923794
Ran for 77050 frames Cell Events: 1785 mean_circ: 0.923755
Ran for 77550 frames Cell Events: 1799 mean_circ: 0.923618
Ran for 78050 frames Cell Events: 1813 mean_circ: 0.923826
Ran for 78550 frames Cell Events: 1827 mean_circ: 0.923817
Ran for 80050 frames Cell Events: 1871 mean_circ: 0.923499
Ran for 80550 frames Cell Events: 1879 mean_circ: 0.923511
Ran for 82050 frames Cell Events: 1923 mean_circ: 0.923938
Ran for 82550 frames Cell Events: 1931 mean_circ: 0.923903
Ran for 83050 frames Cell Events: 1944 mean_circ: 0.923793
Ran for 83550 frames Cell Events: 1949 mean_circ: 0.92367
Ran for 84050 frames Cell Events: 1963 mean_circ: 0.923415
Ran for 84550 frames Cell Events: 1977 mean_circ: 0.923605
Ran for 85550 frames Cell Events: 1994 mean_circ: 0.923432
Ran for 86550 frames Cell Events: 2016 mean_circ: 0.92339
Ran for 88050 frames Cell Events: 2059 mean_circ: 0.923392
Ran for 88550 frames Cell Events: 2076 mean_circ: 0.923477
Ran for 90050 frames Cell Events: 2110 mean_circ: 0.923726
Ran for 90550 frames Cell Events: 2121 mean_circ: 0.923717
Ran for 91550 frames Cell Events: 2154 mean_circ: 0.923825
Ran for 92050 frames Cell Events: 2164 mean_circ: 0.923863
Ran for 92550 frames Cell Events: 2178 mean_circ: 0.923994
Ran for 93050 frames Cell Events: 2201 mean_circ: 0.92399
Ran for 93550 frames Cell Events: 2213 mean_circ: 0.92393
Ran for 94050 frames Cell Events: 2223 mean_circ: 0.923832
Ran for 94550 frames Cell Events: 2238 mean_circ: 0.923857
Ran for 95050 frames Cell Events: 2246 mean_circ: 0.923981
Ran for 95550 frames Cell Events: 2256 mean_circ: 0.923918
Ran for 96050 frames Cell Events: 2270 mean_circ: 0.923979
Ran for 98550 frames Cell Events: 2323 mean_circ: 0.924078
Ran for 99550 frames Cell Events: 2336 mean_circ: 0.924116
Ran for 100550 frames Cell Events: 2356 mean_circ: 0.924238
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Ran for 101550 frames Cell Events: 2376 mean_circ: 0.924224
Ran for 102050 frames Cell Events: 2389 mean_circ: 0.92424
Ran for 103050 frames Cell Events: 2416 mean_circ: 0.924176
Ran for 103550 frames Cell Events: 2429 mean_circ: 0.924272
Ran for 104050 frames Cell Events: 2446 mean_circ: 0.924197
Ran for 104550 frames Cell Events: 2457 mean_circ: 0.924149
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Ran for 106050 frames Cell Events: 2499 mean_circ: 0.924035
Ran for 106550 frames Cell Events: 2507 mean_circ: 0.923876
Ran for 107550 frames Cell Events: 2532 mean_circ: 0.923741
Ran for 108550 frames Cell Events: 2550 mean_circ: 0.923804
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Ran for 110050 frames Cell Events: 2585 mean_circ: 0.923743
Ran for 111550 frames Cell Events: 2616 mean_circ: 0.923744
Ran for 112050 frames Cell Events: 2627 mean_circ: 0.923842
Ran for 112550 frames Cell Events: 2633 mean_circ: 0.923895
Ran for 113050 frames Cell Events: 2647 mean_circ: 0.923737
Ran for 113550 frames Cell Events: 2661 mean_circ: 0.923759
Ran for 117050 frames Cell Events: 2752 mean_circ: 0.924026
Ran for 117550 frames Cell Events: 2759 mean_circ: 0.923929
Ran for 118550 frames Cell Events: 2781 mean_circ: 0.924047
Ran for 119050 frames Cell Events: 2791 mean_circ: 0.924197
Ran for 119550 frames Cell Events: 2801 mean_circ: 0.924179
Ran for 120050 frames Cell Events: 2815 mean_circ: 0.924146
Ran for 120550 frames Cell Events: 2826 mean_circ: 0.924173
Ran for 121050 frames Cell Events: 2838 mean_circ: 0.924252
Ran for 122050 frames Cell Events: 2856 mean_circ: 0.924242
Ran for 122550 frames Cell Events: 2864 mean_circ: 0.924062
Ran for 123050 frames Cell Events: 2872 mean_circ: 0.924034
Ran for 123550 frames Cell Events: 2891 mean_circ: 0.924012
Ran for 124050 frames Cell Events: 2902 mean_circ: 0.924033
Ran for 124550 frames Cell Events: 2912 mean_circ: 0.923978
Ran for 125050 frames Cell Events: 2923 mean_circ: 0.923897
Ran for 125550 frames Cell Events: 2928 mean_circ: 0.923927
Ran for 126050 frames Cell Events: 2938 mean_circ: 0.923881
Ran for 126550 frames Cell Events: 2947 mean_circ: 0.923932
Ran for 128550 frames Cell Events: 2992 mean_circ: 0.923973
Ran for 129050 frames Cell Events: 3003 mean_circ: 0.923991
Ran for 129550 frames Cell Events: 3013 mean_circ: 0.924028
Ran for 130550 frames Cell Events: 3045 mean_circ: 0.924234
Ran for 131050 frames Cell Events: 3063 mean_circ: 0.924199
Ran for 131550 frames Cell Events: 3078 mean_circ: 0.924248
Ran for 132050 frames Cell Events: 3093 mean_circ: 0.924236
Ran for 132550 frames Cell Events: 3107 mean_circ: 0.924187
Ran for 133050 frames Cell Events: 3121 mean_circ: 0.924028
Ran for 133550 frames Cell Events: 3127 mean_circ: 0.924047
Ran for 134550 frames Cell Events: 3150 mean_circ: 0.92397
Ran for 135050 frames Cell Events: 3163 mean_circ: 0.923963
Ran for 136050 frames Cell Events: 3193 mean_circ: 0.923824
Ran for 137050 frames Cell Events: 3220 mean_circ: 0.923878
Ran for 138050 frames Cell Events: 3239 mean_circ: 0.923948
Ran for 138550 frames Cell Events: 3251 mean_circ: 0.923915
Ran for 139050 frames Cell Events: 3260 mean_circ: 0.923837
Ran for 139550 frames Cell Events: 3273 mean_circ: 0.923848
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Ran for 140550 frames Cell Events: 3291 mean_circ: 0.923752
Ran for 141050 frames Cell Events: 3307 mean_circ: 0.923763
Ran for 141550 frames Cell Events: 3315 mean_circ: 0.92372
Ran for 142050 frames Cell Events: 3339 mean_circ: 0.923758
Ran for 142550 frames Cell Events: 3347 mean_circ: 0.923755
Ran for 143550 frames Cell Events: 3366 mean_circ: 0.923662
Ran for 144050 frames Cell Events: 3373 mean_circ: 0.923626
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Ran for 147050 frames Cell Events: 3437 mean_circ: 0.923616
Ran for 147550 frames Cell Events: 3447 mean_circ: 0.923657
Ran for 148050 frames Cell Events: 3452 mean_circ: 0.923636
Ran for 149550 frames Cell Events: 3490 mean_circ: 0.92341
Ran for 150050 frames Cell Events: 3497 mean_circ: 0.923418
Ran for 150550 frames Cell Events: 3513 mean_circ: 0.923413
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Ran for 152050 frames Cell Events: 3562 mean_circ: 0.923137
Ran for 152550 frames Cell Events: 3573 mean_circ: 0.922964
Ran for 153050 frames Cell Events: 3584 mean_circ: 0.922976
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Ran for 156550 frames Cell Events: 3676 mean_circ: 0.9227
Ran for 157050 frames Cell Events: 3681 mean_circ: 0.922706
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Ran for 161050 frames Cell Events: 3759 mean_circ: 0.922627
Ran for 161550 frames Cell Events: 3769 mean_circ: 0.922659
Ran for 162050 frames Cell Events: 3782 mean_circ: 0.922708
Ran for 162550 frames Cell Events: 3791 mean_circ: 0.922684
Ran for 163050 frames Cell Events: 3800 mean_circ: 0.92267
Ran for 163550 frames Cell Events: 3816 mean_circ: 0.922734
Ran for 164550 frames Cell Events: 3836 mean_circ: 0.922661
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Ran for 165550 frames Cell Events: 3856 mean_circ: 0.922751
Ran for 166050 frames Cell Events: 3866 mean_circ: 0.922787
Ran for 166550 frames Cell Events: 3885 mean_circ: 0.922825
Ran for 167050 frames Cell Events: 3898 mean_circ: 0.922879
Ran for 167550 frames Cell Events: 3907 mean_circ: 0.922882
Ran for 168550 frames Cell Events: 3931 mean_circ: 0.922973
Ran for 169050 frames Cell Events: 3938 mean_circ: 0.922959
Ran for 170050 frames Cell Events: 3961 mean_circ: 0.922936
Ran for 170550 frames Cell Events: 3973 mean_circ: 0.922784
Ran for 171550 frames Cell Events: 3993 mean_circ: 0.922792
Ran for 172550 frames Cell Events: 4016 mean_circ: 0.922863
Ran for 173050 frames Cell Events: 4021 mean_circ: 0.922867
Ran for 174050 frames Cell Events: 4051 mean_circ: 0.922749
Ran for 174550 frames Cell Events: 4062 mean_circ: 0.922769
Ran for 176050 frames Cell Events: 4103 mean_circ: 0.922836
Ran for 176550 frames Cell Events: 4113 mean_circ: 0.922802
Ran for 177050 frames Cell Events: 4127 mean_circ: 0.922819
Ran for 177550 frames Cell Events: 4141 mean_circ: 0.922873
Ran for 178050 frames Cell Events: 4159 mean_circ: 0.922838
Ran for 178550 frames Cell Events: 4170 mean_circ: 0.922643
Ran for 179050 frames Cell Events: 4183 mean_circ: 0.922628
Ran for 180050 frames Cell Events: 4207 mean_circ: 0.922709
Ran for 180550 frames Cell Events: 4221 mean_circ: 0.922698
Ran for 182050 frames Cell Events: 4273 mean_circ: 0.922575
Ran for 183050 frames Cell Events: 4298 mean_circ: 0.922727
Ran for 184550 frames Cell Events: 4354 mean_circ: 0.922866
Ran for 185550 frames Cell Events: 4381 mean_circ: 0.922824
Ran for 186050 frames Cell Events: 4394 mean_circ: 0.922837
Ran for 187050 frames Cell Events: 4422 mean_circ: 0.922863
Ran for 188050 frames Cell Events: 4461 mean_circ: 0.922645
Ran for 188550 frames Cell Events: 4471 mean_circ: 0.922705
Ran for 189050 frames Cell Events: 4480 mean_circ: 0.922659
Ran for 190050 frames Cell Events: 4505 mean_circ: 0.922788
Ran for 190550 frames Cell Events: 4517 mean_circ: 0.92277
Ran for 191050 frames Cell Events: 4531 mean_circ: 0.922752
Ran for 193050 frames Cell Events: 4585 mean_circ: 0.922787
Ran for 193550 frames Cell Events: 4591 mean_circ: 0.922808
Ran for 194050 frames Cell Events: 4596 mean_circ: 0.922793
Ran for 195550 frames Cell Events: 4638 mean_circ: 0.922614
Ran for 196050 frames Cell Events: 4651 mean_circ: 0.92249
Ran for 197050 frames Cell Events: 4668 mean_circ: 0.922512
Ran for 198550 frames Cell Events: 4709 mean_circ: 0.922475
Ran for 199550 frames Cell Events: 4737 mean_circ: 0.92247
Ran for 200050 frames Cell Events: 4752 mean_circ: 0.922412
Ran for 201050 frames Cell Events: 4784 mean_circ: 0.922475
Ran for 201550 frames Cell Events: 4800 mean_circ: 0.922466
Ran for 202550 frames Cell Events: 4823 mean_circ: 0.922314
Ran for 203550 frames Cell Events: 4864 mean_circ: 0.922278
Ran for 204050 frames Cell Events: 4878 mean_circ: 0.922266
Ran for 204550 frames Cell Events: 4888 mean_circ: 0.922232
Ran for 205550 frames Cell Events: 4924 mean_circ: 0.922048
Ran for 206550 frames Cell Events: 4960 mean_circ: 0.922087
Ran for 207050 frames Cell Events: 4968 mean_circ: 0.922033
Ran for 207550 frames Cell Events: 4975 mean_circ: 0.922027
Ran for 208050 frames Cell Events: 4985 mean_circ: 0.921965
Ran for 209550 frames Cell Events: 5013 mean_circ: 0.921873
Ran for 210550 frames Cell Events: 5036 mean_circ: 0.921728
Ran for 211050 frames Cell Events: 5057 mean_circ: 0.92172
Ran for 211550 frames Cell Events: 5067 mean_circ: 0.921727
Ran for 212050 frames Cell Events: 5079 mean_circ: 0.921758
Ran for 212550 frames Cell Events: 5086 mean_circ: 0.921753
Ran for 213050 frames Cell Events: 5103 mean_circ: 0.921721
Ran for 213550 frames Cell Events: 5113 mean_circ: 0.921666
Ran for 214050 frames Cell Events: 5132 mean_circ: 0.921567
Ran for 215050 frames Cell Events: 5154 mean_circ: 0.921494
Ran for 216050 frames Cell Events: 5180 mean_circ: 0.921478
Ran for 217050 frames Cell Events: 5199 mean_circ: 0.921538
Ran for 217550 frames Cell Events: 5214 mean_circ: 0.92151
Ran for 218050 frames Cell Events: 5223 mean_circ: 0.921508
Ran for 218550 frames Cell Events: 5234 mean_circ: 0.921492
Ran for 219050 frames Cell Events: 5244 mean_circ: 0.921413
Ran for 219550 frames Cell Events: 5254 mean_circ: 0.921452
Ran for 220050 frames Cell Events: 5259 mean_circ: 0.921479
Ran for 220550 frames Cell Events: 5271 mean_circ: 0.921456
Ran for 221050 frames Cell Events: 5281 mean_circ: 0.92145
Ran for 222050 frames Cell Events: 5303 mean_circ: 0.921468
Ran for 223050 frames Cell Events: 5330 mean_circ: 0.921432
Ran for 224050 frames Cell Events: 5353 mean_circ: 0.921474
Ran for 224550 frames Cell Events: 5361 mean_circ: 0.921334
Ran for 225550 frames Cell Events: 5388 mean_circ: 0.921298
Ran for 226050 frames Cell Events: 5401 mean_circ: 0.921351
Ran for 226550 frames Cell Events: 5414 mean_circ: 0.921348
Ran for 227050 frames Cell Events: 5427 mean_circ: 0.921354
Ran for 228050 frames Cell Events: 5448 mean_circ: 0.921363
Ran for 228550 frames Cell Events: 5463 mean_circ: 0.921377
Ran for 229050 frames Cell Events: 5484 mean_circ: 0.921422
Ran for 229550 frames Cell Events: 5495 mean_circ: 0.921344
Ran for 230050 frames Cell Events: 5510 mean_circ: 0.921337
Ran for 230550 frames Cell Events: 5517 mean_circ: 0.921346
Ran for 231050 frames Cell Events: 5526 mean_circ: 0.921359
Ran for 231550 frames Cell Events: 5540 mean_circ: 0.921319
Ran for 232050 frames Cell Events: 5553 mean_circ: 0.9213
Ran for 232550 frames Cell Events: 5567 mean_circ: 0.921334
Ran for 233050 frames Cell Events: 5583 mean_circ: 0.921342
Ran for 233550 frames Cell Events: 5600 mean_circ: 0.921354
Ran for 234050 frames Cell Events: 5612 mean_circ: 0.921352
Ran for 234550 frames Cell Events: 5624 mean_circ: 0.921382
Ran for 235050 frames Cell Events: 5638 mean_circ: 0.921391
Ran for 235550 frames Cell Events: 5650 mean_circ: 0.921409
Ran for 236050 frames Cell Events: 5662 mean_circ: 0.921475
Ran for 237050 frames Cell Events: 5688 mean_circ: 0.921501
Ran for 237550 frames Cell Events: 5703 mean_circ: 0.921505
Ran for 238050 frames Cell Events: 5713 mean_circ: 0.921456
Ran for 238550 frames Cell Events: 5719 mean_circ: 0.921445
Ran for 239050 frames Cell Events: 5739 mean_circ: 0.92151
Ran for 239550 frames Cell Events: 5757 mean_circ: 0.921494
Ran for 240550 frames Cell Events: 5790 mean_circ: 0.92156
Ran for 241050 frames Cell Events: 5806 mean_circ: 0.921596
Ran for 241550 frames Cell Events: 5814 mean_circ: 0.92161
Ran for 242050 frames Cell Events: 5831 mean_circ: 0.921661
Ran for 242550 frames Cell Events: 5841 mean_circ: 0.921647
Ran for 243050 frames Cell Events: 5861 mean_circ: 0.921571
Ran for 243550 frames Cell Events: 5870 mean_circ: 0.921616
Ran for 244050 frames Cell Events: 5892 mean_circ: 0.921562
Ran for 244550 frames Cell Events: 5901 mean_circ: 0.921569
Ran for 245050 frames Cell Events: 5910 mean_circ: 0.9216
Ran for 245550 frames Cell Events: 5933 mean_circ: 0.92157
Ran for 246550 frames Cell Events: 5964 mean_circ: 0.921549
Ran for 247050 frames Cell Events: 5974 mean_circ: 0.921529
Ran for 247550 frames Cell Events: 5987 mean_circ: 0.921427
Ran for 248050 frames Cell Events: 6004 mean_circ: 0.921429
Ran for 248550 frames Cell Events: 6014 mean_circ: 0.92146
Ran for 249050 frames Cell Events: 6023 mean_circ: 0.921455
Ran for 249550 frames Cell Events: 6040 mean_circ: 0.921463
Ran for 250550 frames Cell Events: 6064 mean_circ: 0.921392
Ran for 251050 frames Cell Events: 6074 mean_circ: 0.92144
Ran for 251550 frames Cell Events: 6084 mean_circ: 0.921393
Ran for 252050 frames Cell Events: 6092 mean_circ: 0.921402
Ran for 252550 frames Cell Events: 6107 mean_circ: 0.921423
Ran for 253550 frames Cell Events: 6134 mean_circ: 0.921551
Ran for 254550 frames Cell Events: 6148 mean_circ: 0.921529
Ran for 256050 frames Cell Events: 6187 mean_circ: 0.921497
Ran for 257550 frames Cell Events: 6222 mean_circ: 0.92161
Ran for 258050 frames Cell Events: 6232 mean_circ: 0.921624
Ran for 258550 frames Cell Events: 6257 mean_circ: 0.921576
Ran for 259550 frames Cell Events: 6279 mean_circ: 0.921575
Ran for 260050 frames Cell Events: 6288 mean_circ: 0.921565
Ran for 260550 frames Cell Events: 6294 mean_circ: 0.921538
Ran for 261050 frames Cell Events: 6307 mean_circ: 0.921537
Ran for 261550 frames Cell Events: 6324 mean_circ: 0.921545
Ran for 262550 frames Cell Events: 6349 mean_circ: 0.921527
Ran for 263050 frames Cell Events: 6362 mean_circ: 0.921527
Ran for 264050 frames Cell Events: 6378 mean_circ: 0.92157
Ran for 265050 frames Cell Events: 6406 mean_circ: 0.921598
Ran for 265550 frames Cell Events: 6421 mean_circ: 0.921625
Ran for 266550 frames Cell Events: 6441 mean_circ: 0.921569
Ran for 267050 frames Cell Events: 6450 mean_circ: 0.921577
Ran for 267550 frames Cell Events: 6466 mean_circ: 0.921459
Ran for 268050 frames Cell Events: 6474 mean_circ: 0.921457
Ran for 268550 frames Cell Events: 6482 mean_circ: 0.921463
Ran for 269050 frames Cell Events: 6494 mean_circ: 0.921468
Ran for 270550 frames Cell Events: 6548 mean_circ: 0.921461
Ran for 271050 frames Cell Events: 6564 mean_circ: 0.921496
Ran for 271550 frames Cell Events: 6577 mean_circ: 0.921551
Ran for 272550 frames Cell Events: 6617 mean_circ: 0.921583
Ran for 273050 frames Cell Events: 6632 mean_circ: 0.921647
Ran for 273550 frames Cell Events: 6649 mean_circ: 0.921676
Ran for 274050 frames Cell Events: 6668 mean_circ: 0.92163
Ran for 274550 frames Cell Events: 6676 mean_circ: 0.921628
Ran for 275050 frames Cell Events: 6684 mean_circ: 0.921602
Ran for 276050 frames Cell Events: 6709 mean_circ: 0.921629
Ran for 276550 frames Cell Events: 6726 mean_circ: 0.921632
Ran for 277050 frames Cell Events: 6738 mean_circ: 0.92164
Ran for 279050 frames Cell Events: 6785 mean_circ: 0.92156
Ran for 280050 frames Cell Events: 6818 mean_circ: 0.921503
Ran for 280550 frames Cell Events: 6837 mean_circ: 0.921507
Ran for 281050 frames Cell Events: 6849 mean_circ: 0.92148
Ran for 281550 frames Cell Events: 6859 mean_circ: 0.921444
Ran for 282050 frames Cell Events: 6876 mean_circ: 0.921465
Ran for 283050 frames Cell Events: 6909 mean_circ: 0.921489
Ran for 283550 frames Cell Events: 6934 mean_circ: 0.921488
Ran for 284050 frames Cell Events: 6947 mean_circ: 0.921473
Ran for 285050 frames Cell Events: 6974 mean_circ: 0.921587
Ran for 285550 frames Cell Events: 6982 mean_circ: 0.921579
Ran for 286050 frames Cell Events: 6990 mean_circ: 0.921597
Ran for 286550 frames Cell Events: 7009 mean_circ: 0.921548
Ran for 287050 frames Cell Events: 7033 mean_circ: 0.921564
Ran for 287550 frames Cell Events: 7048 mean_circ: 0.9216
Ran for 288050 frames Cell Events: 7058 mean_circ: 0.921598
Ran for 288550 frames Cell Events: 7078 mean_circ: 0.921534
Ran for 289050 frames Cell Events: 7094 mean_circ: 0.921499
Ran for 289550 frames Cell Events: 7101 mean_circ: 0.921433
Ran for 290550 frames Cell Events: 7125 mean_circ: 0.921457
Ran for 291550 frames Cell Events: 7152 mean_circ: 0.921577
Ran for 292050 frames Cell Events: 7166 mean_circ: 0.921519
Ran for 292550 frames Cell Events: 7179 mean_circ: 0.921525
Ran for 293050 frames Cell Events: 7193 mean_circ: 0.92153
Ran for 293550 frames Cell Events: 7206 mean_circ: 0.921557
Ran for 294550 frames Cell Events: 7235 mean_circ: 0.92159
Ran for 295050 frames Cell Events: 7249 mean_circ: 0.921565
Ran for 296050 frames Cell Events: 7282 mean_circ: 0.921585
Ran for 296550 frames Cell Events: 7291 mean_circ: 0.921598
Ran for 297050 frames Cell Events: 7307 mean_circ: 0.921612
Ran for 297550 frames Cell Events: 7326 mean_circ: 0.921624
Ran for 298050 frames Cell Events: 7336 mean_circ: 0.921644
Ran for 299050 frames Cell Events: 7365 mean_circ: 0.921732
Ran for 299550 frames Cell Events: 7380 mean_circ: 0.921729
Ran for 300550 frames Cell Events: 7419 mean_circ: 0.921684
Ran for 301050 frames Cell Events: 7430 mean_circ: 0.92165
Ran for 301550 frames Cell Events: 7444 mean_circ: 0.921616
Ran for 302050 frames Cell Events: 7458 mean_circ: 0.921597
Ran for 302550 frames Cell Events: 7481 mean_circ: 0.921627
Ran for 303050 frames Cell Events: 7504 mean_circ: 0.921492
Ran for 303550 frames Cell Events: 7516 mean_circ: 0.921522
Ran for 304050 frames Cell Events: 7528 mean_circ: 0.921489
Ran for 304550 frames Cell Events: 7544 mean_circ: 0.921428
Ran for 305050 frames Cell Events: 7554 mean_circ: 0.921429
Ran for 305550 frames Cell Events: 7576 mean_circ: 0.921392
Ran for 306050 frames Cell Events: 7586 mean_circ: 0.921346
Ran for 306550 frames Cell Events: 7596 mean_circ: 0.921361
Ran for 307050 frames Cell Events: 7609 mean_circ: 0.92137
Ran for 307550 frames Cell Events: 7622 mean_circ: 0.921389
Ran for 308050 frames Cell Events: 7629 mean_circ: 0.921417
Ran for 308550 frames Cell Events: 7637 mean_circ: 0.921439
Ran for 309550 frames Cell Events: 7651 mean_circ: 0.92138
Ran for 310050 frames Cell Events: 7657 mean_circ: 0.921358
Ran for 311550 frames Cell Events: 7698 mean_circ: 0.921385
Ran for 312050 frames Cell Events: 7710 mean_circ: 0.921359
Ran for 312550 frames Cell Events: 7727 mean_circ: 0.921329
Ran for 313550 frames Cell Events: 7759 mean_circ: 0.921318
Ran for 314550 frames Cell Events: 7800 mean_circ: 0.921317
Ran for 315050 frames Cell Events: 7813 mean_circ: 0.921331
Ran for 315550 frames Cell Events: 7821 mean_circ: 0.921353
Ran for 316550 frames Cell Events: 7848 mean_circ: 0.92138
Ran for 317050 frames Cell Events: 7856 mean_circ: 0.921415
Ran for 317550 frames Cell Events: 7871 mean_circ: 0.92137
Ran for 318050 frames Cell Events: 7887 mean_circ: 0.921339
Ran for 318550 frames Cell Events: 7905 mean_circ: 0.921368
Ran for 319050 frames Cell Events: 7922 mean_circ: 0.921383
Ran for 319550 frames Cell Events: 7937 mean_circ: 0.92142
Ran for 320050 frames Cell Events: 7949 mean_circ: 0.921384
Ran for 320550 frames Cell Events: 7967 mean_circ: 0.921438
Ran for 321050 frames Cell Events: 7983 mean_circ: 0.92145
Ran for 321550 frames Cell Events: 7998 mean_circ: 0.921471
Ran for 323050 frames Cell Events: 8049 mean_circ: 0.921541
Ran for 323550 frames Cell Events: 8067 mean_circ: 0.921544
Ran for 324550 frames Cell Events: 8102 mean_circ: 0.921537
Ran for 325050 frames Cell Events: 8120 mean_circ: 0.921554
Ran for 325550 frames Cell Events: 8135 mean_circ: 0.921539
Ran for 327050 frames Cell Events: 8185 mean_circ: 0.921415
Ran for 327550 frames Cell Events: 8192 mean_circ: 0.921419
Ran for 328050 frames Cell Events: 8202 mean_circ: 0.921402
Ran for 328550 frames Cell Events: 8216 mean_circ: 0.921366
Ran for 329050 frames Cell Events: 8240 mean_circ: 0.921357
Ran for 330550 frames Cell Events: 8280 mean_circ: 0.921368
Ran for 331050 frames Cell Events: 8289 mean_circ: 0.921369
Ran for 331550 frames Cell Events: 8303 mean_circ: 0.921402
Ran for 332050 frames Cell Events: 8318 mean_circ: 0.921431
Ran for 332550 frames Cell Events: 8333 mean_circ: 0.921457
Ran for 333050 frames Cell Events: 8345 mean_circ: 0.921446
Ran for 333550 frames Cell Events: 8358 mean_circ: 0.921422
Ran for 334050 frames Cell Events: 8379 mean_circ: 0.92137
Ran for 334550 frames Cell Events: 8391 mean_circ: 0.921341
Ran for 335550 frames Cell Events: 8425 mean_circ: 0.921363
Ran for 336050 frames Cell Events: 8444 mean_circ: 0.92138
Ran for 336550 frames Cell Events: 8469 mean_circ: 0.921212
Ran for 337050 frames Cell Events: 8490 mean_circ: 0.921209
Ran for 337550 frames Cell Events: 8506 mean_circ: 0.921187
Ran for 338050 frames Cell Events: 8524 mean_circ: 0.921205
Ran for 339050 frames Cell Events: 8562 mean_circ: 0.92127
Ran for 339550 frames Cell Events: 8580 mean_circ: 0.921298
Ran for 340050 frames Cell Events: 8597 mean_circ: 0.921254
Ran for 340550 frames Cell Events: 8615 mean_circ: 0.921278
Ran for 341050 frames Cell Events: 8627 mean_circ: 0.921202
Ran for 341550 frames Cell Events: 8642 mean_circ: 0.921237
Ran for 342050 frames Cell Events: 8655 mean_circ: 0.921256
End this measurment..
Stopping time: 1.92102e+009
****************************************
Measurement finished
Mean Circularitiy: 0.921314
Mean Area: 598.103
Mean FL-1 intensity: 3336.52
Mean FL-2 intensity: 4427.26
Mean FL-3 intensity: 0
frames processed: 342671
Total Time: 171584ms
Number of Runs (new bg img) 0
Frames collected: 343035
Skipped frames: 2920
Rescued Frames: 343769
Samples DAQ: 85758686
Samples written: 171517288
Samples per Channel: 85758644
FPS: 1999.23
Samples per second: 499807
Expected samples/s: 500000
Events: 8682
Events per second: 50.5992
jumped back (PMT): 5347
#Frames read, frequency
# 0 frames :469744
# 1 frames :194395
# 2 frames :5799
# 3 frames :2616
# 4 frames :1595
# 5 frames :789
# 6 frames :903
# 7 frames :1930
# 8 frames :1483
# 9 frames :1174
# 10 frames :1287
# 11 frames :933
# 12 frames :757
# 13 frames :537
# 14 frames :390
# 15 frames :335
# 16 frames :305
# 17 frames :261
# 18 frames :193
# 19 frames :106
# 20 frames :95
# 21 frames :81
# 22 frames :65
# 23 frames :31
# 24 frames :31
# 25 frames :28
# 26 frames :30
# 27 frames :20
# 28 frames :25
# 29 frames :20
# 30 frames :13
# 31 frames :9
# 32 frames :6
# 33 frames :9
# 34 frames :4
# 35 frames :5
# 36 frames :5
# 37 frames :3
# 38 frames :7
# 39 frames :4
# 40 frames :1
# 41 frames :3
# 42 frames :4
# 43 frames :2
# 44 frames :3
# 46 frames :2
# 48 frames :1
# 52 frames :1
# 53 frames :1
# 56 frames :1
# 59 frames :1
# 60 frames :1
# 84 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.5623
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0