Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.38.41
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "6331b4ad346cb457be473ed092903ba5",
"name": "M1_20170606_1401_dsRNA_N1_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:39:04"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 9416 (max 9417) in '9416'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.5894
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.92109e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 17 mean_circ: 0.912954
Ran for 1050 frames Cell Events: 34 mean_circ: 0.916953
Ran for 1550 frames Cell Events: 45 mean_circ: 0.91047
Ran for 2050 frames Cell Events: 65 mean_circ: 0.911586
Ran for 2550 frames Cell Events: 79 mean_circ: 0.905626
Ran for 3050 frames Cell Events: 91 mean_circ: 0.906178
Ran for 4050 frames Cell Events: 125 mean_circ: 0.903643
Ran for 5050 frames Cell Events: 153 mean_circ: 0.901804
Ran for 5550 frames Cell Events: 162 mean_circ: 0.901842
Ran for 6050 frames Cell Events: 177 mean_circ: 0.901822
Ran for 7050 frames Cell Events: 206 mean_circ: 0.903195
Ran for 7550 frames Cell Events: 220 mean_circ: 0.904031
Ran for 8050 frames Cell Events: 237 mean_circ: 0.904233
Ran for 8550 frames Cell Events: 259 mean_circ: 0.905802
Ran for 9050 frames Cell Events: 272 mean_circ: 0.90646
Ran for 10050 frames Cell Events: 299 mean_circ: 0.907346
Ran for 10550 frames Cell Events: 312 mean_circ: 0.908802
Ran for 11050 frames Cell Events: 338 mean_circ: 0.909098
Ran for 11550 frames Cell Events: 361 mean_circ: 0.909736
Ran for 12050 frames Cell Events: 372 mean_circ: 0.910034
Ran for 12550 frames Cell Events: 389 mean_circ: 0.91151
Ran for 13050 frames Cell Events: 403 mean_circ: 0.911285
Ran for 13550 frames Cell Events: 416 mean_circ: 0.91134
Ran for 14050 frames Cell Events: 434 mean_circ: 0.911588
Ran for 14550 frames Cell Events: 448 mean_circ: 0.912302
Ran for 15050 frames Cell Events: 460 mean_circ: 0.913
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Ran for 16050 frames Cell Events: 489 mean_circ: 0.912308
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Ran for 18050 frames Cell Events: 539 mean_circ: 0.911388
Ran for 19550 frames Cell Events: 587 mean_circ: 0.912714
Ran for 20050 frames Cell Events: 607 mean_circ: 0.91204
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Ran for 21050 frames Cell Events: 640 mean_circ: 0.911351
Ran for 22050 frames Cell Events: 676 mean_circ: 0.911555
Ran for 22550 frames Cell Events: 694 mean_circ: 0.911968
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Ran for 23550 frames Cell Events: 726 mean_circ: 0.911521
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Ran for 26050 frames Cell Events: 780 mean_circ: 0.911533
Ran for 27050 frames Cell Events: 812 mean_circ: 0.910857
Ran for 28050 frames Cell Events: 839 mean_circ: 0.910439
Ran for 29550 frames Cell Events: 892 mean_circ: 0.910248
Ran for 30050 frames Cell Events: 903 mean_circ: 0.909852
Ran for 30550 frames Cell Events: 919 mean_circ: 0.90954
Ran for 31050 frames Cell Events: 940 mean_circ: 0.910294
Ran for 31550 frames Cell Events: 955 mean_circ: 0.909562
Ran for 32050 frames Cell Events: 969 mean_circ: 0.90919
Ran for 33050 frames Cell Events: 1003 mean_circ: 0.908955
Ran for 35550 frames Cell Events: 1079 mean_circ: 0.908481
Ran for 36050 frames Cell Events: 1092 mean_circ: 0.908227
Ran for 37050 frames Cell Events: 1118 mean_circ: 0.908391
Ran for 37550 frames Cell Events: 1145 mean_circ: 0.908391
Ran for 38050 frames Cell Events: 1153 mean_circ: 0.908485
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Ran for 39050 frames Cell Events: 1186 mean_circ: 0.908014
Ran for 39550 frames Cell Events: 1200 mean_circ: 0.90786
Ran for 40050 frames Cell Events: 1215 mean_circ: 0.907981
Ran for 40550 frames Cell Events: 1230 mean_circ: 0.908012
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Ran for 42050 frames Cell Events: 1267 mean_circ: 0.908438
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Ran for 43050 frames Cell Events: 1302 mean_circ: 0.909034
Ran for 43550 frames Cell Events: 1318 mean_circ: 0.908773
Ran for 44050 frames Cell Events: 1329 mean_circ: 0.90868
Ran for 45050 frames Cell Events: 1351 mean_circ: 0.90844
Ran for 45550 frames Cell Events: 1367 mean_circ: 0.90874
Ran for 46050 frames Cell Events: 1378 mean_circ: 0.909035
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Ran for 47050 frames Cell Events: 1416 mean_circ: 0.909296
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Ran for 53050 frames Cell Events: 1609 mean_circ: 0.909616
Ran for 54550 frames Cell Events: 1659 mean_circ: 0.909337
Ran for 55550 frames Cell Events: 1692 mean_circ: 0.909487
Ran for 56050 frames Cell Events: 1707 mean_circ: 0.909495
Ran for 57050 frames Cell Events: 1748 mean_circ: 0.909063
Ran for 58050 frames Cell Events: 1763 mean_circ: 0.909026
Ran for 58550 frames Cell Events: 1779 mean_circ: 0.908843
Ran for 59550 frames Cell Events: 1814 mean_circ: 0.908924
Ran for 60050 frames Cell Events: 1829 mean_circ: 0.908921
Ran for 61050 frames Cell Events: 1855 mean_circ: 0.909154
Ran for 61550 frames Cell Events: 1870 mean_circ: 0.909292
Ran for 62050 frames Cell Events: 1882 mean_circ: 0.90948
Ran for 62550 frames Cell Events: 1894 mean_circ: 0.909244
Ran for 63050 frames Cell Events: 1903 mean_circ: 0.909283
Ran for 63550 frames Cell Events: 1912 mean_circ: 0.909277
Ran for 64050 frames Cell Events: 1925 mean_circ: 0.909302
Ran for 66050 frames Cell Events: 1975 mean_circ: 0.909096
Ran for 67050 frames Cell Events: 2006 mean_circ: 0.909114
Ran for 68050 frames Cell Events: 2033 mean_circ: 0.909105
Ran for 68550 frames Cell Events: 2047 mean_circ: 0.909125
Ran for 69050 frames Cell Events: 2072 mean_circ: 0.909011
Ran for 70050 frames Cell Events: 2095 mean_circ: 0.908535
Ran for 71050 frames Cell Events: 2135 mean_circ: 0.908364
Ran for 71550 frames Cell Events: 2144 mean_circ: 0.908288
Ran for 72050 frames Cell Events: 2162 mean_circ: 0.907718
Ran for 73050 frames Cell Events: 2185 mean_circ: 0.907754
Ran for 73550 frames Cell Events: 2213 mean_circ: 0.90768
Ran for 74550 frames Cell Events: 2247 mean_circ: 0.907856
Ran for 75050 frames Cell Events: 2257 mean_circ: 0.907922
Ran for 77050 frames Cell Events: 2308 mean_circ: 0.907757
Ran for 78050 frames Cell Events: 2333 mean_circ: 0.907635
Ran for 78550 frames Cell Events: 2342 mean_circ: 0.907585
Ran for 79550 frames Cell Events: 2383 mean_circ: 0.90755
Ran for 80050 frames Cell Events: 2398 mean_circ: 0.907457
Ran for 80550 frames Cell Events: 2408 mean_circ: 0.907597
Ran for 81550 frames Cell Events: 2444 mean_circ: 0.907369
Ran for 82050 frames Cell Events: 2462 mean_circ: 0.907327
Ran for 82550 frames Cell Events: 2472 mean_circ: 0.907504
Ran for 83050 frames Cell Events: 2499 mean_circ: 0.90769
Ran for 84050 frames Cell Events: 2538 mean_circ: 0.9076
Ran for 84550 frames Cell Events: 2552 mean_circ: 0.907496
Ran for 85050 frames Cell Events: 2572 mean_circ: 0.907637
Ran for 85550 frames Cell Events: 2588 mean_circ: 0.907745
Ran for 86050 frames Cell Events: 2602 mean_circ: 0.907677
Ran for 86550 frames Cell Events: 2622 mean_circ: 0.907716
Ran for 87550 frames Cell Events: 2661 mean_circ: 0.907903
Ran for 88050 frames Cell Events: 2681 mean_circ: 0.907798
Ran for 89550 frames Cell Events: 2737 mean_circ: 0.908067
Ran for 90050 frames Cell Events: 2747 mean_circ: 0.907801
Ran for 90550 frames Cell Events: 2767 mean_circ: 0.907887
Ran for 91550 frames Cell Events: 2797 mean_circ: 0.90766
Ran for 92050 frames Cell Events: 2810 mean_circ: 0.907669
Ran for 92550 frames Cell Events: 2822 mean_circ: 0.907581
Ran for 93050 frames Cell Events: 2836 mean_circ: 0.907649
Ran for 93550 frames Cell Events: 2855 mean_circ: 0.907669
Ran for 94050 frames Cell Events: 2861 mean_circ: 0.907734
Ran for 94550 frames Cell Events: 2888 mean_circ: 0.907719
Ran for 95550 frames Cell Events: 2931 mean_circ: 0.907943
Ran for 96050 frames Cell Events: 2951 mean_circ: 0.907865
Ran for 97050 frames Cell Events: 2982 mean_circ: 0.907725
Ran for 97550 frames Cell Events: 2991 mean_circ: 0.907759
Ran for 98050 frames Cell Events: 3008 mean_circ: 0.907717
Ran for 98550 frames Cell Events: 3029 mean_circ: 0.907699
Ran for 99050 frames Cell Events: 3053 mean_circ: 0.907714
Ran for 100550 frames Cell Events: 3107 mean_circ: 0.907904
Ran for 101050 frames Cell Events: 3123 mean_circ: 0.907845
Ran for 101550 frames Cell Events: 3140 mean_circ: 0.907934
Ran for 102550 frames Cell Events: 3166 mean_circ: 0.908071
Ran for 104050 frames Cell Events: 3229 mean_circ: 0.908151
Ran for 104550 frames Cell Events: 3247 mean_circ: 0.90787
Ran for 105550 frames Cell Events: 3288 mean_circ: 0.907872
Ran for 106550 frames Cell Events: 3322 mean_circ: 0.90779
Ran for 107050 frames Cell Events: 3336 mean_circ: 0.907893
Ran for 107550 frames Cell Events: 3351 mean_circ: 0.907928
Ran for 108050 frames Cell Events: 3368 mean_circ: 0.907903
Ran for 108550 frames Cell Events: 3386 mean_circ: 0.908095
Ran for 109050 frames Cell Events: 3404 mean_circ: 0.90815
Ran for 109550 frames Cell Events: 3419 mean_circ: 0.908246
Ran for 110050 frames Cell Events: 3442 mean_circ: 0.908057
Ran for 111050 frames Cell Events: 3480 mean_circ: 0.907863
Ran for 111550 frames Cell Events: 3501 mean_circ: 0.908018
Ran for 112050 frames Cell Events: 3512 mean_circ: 0.908105
Ran for 112550 frames Cell Events: 3524 mean_circ: 0.908001
Ran for 115050 frames Cell Events: 3612 mean_circ: 0.908062
Ran for 115550 frames Cell Events: 3627 mean_circ: 0.908043
Ran for 116050 frames Cell Events: 3642 mean_circ: 0.90799
Ran for 116550 frames Cell Events: 3662 mean_circ: 0.907969
Ran for 117050 frames Cell Events: 3675 mean_circ: 0.908027
Ran for 117550 frames Cell Events: 3694 mean_circ: 0.90806
Ran for 118050 frames Cell Events: 3706 mean_circ: 0.907894
Ran for 118550 frames Cell Events: 3720 mean_circ: 0.907906
Ran for 119550 frames Cell Events: 3749 mean_circ: 0.907835
Ran for 120050 frames Cell Events: 3766 mean_circ: 0.907822
Ran for 120550 frames Cell Events: 3786 mean_circ: 0.907761
Ran for 121050 frames Cell Events: 3802 mean_circ: 0.907829
Ran for 122050 frames Cell Events: 3827 mean_circ: 0.907681
Ran for 123050 frames Cell Events: 3861 mean_circ: 0.907473
Ran for 124050 frames Cell Events: 3893 mean_circ: 0.907555
Ran for 124550 frames Cell Events: 3909 mean_circ: 0.907602
Ran for 125050 frames Cell Events: 3927 mean_circ: 0.907554
Ran for 125550 frames Cell Events: 3941 mean_circ: 0.907624
Ran for 126050 frames Cell Events: 3957 mean_circ: 0.907659
Ran for 127050 frames Cell Events: 3992 mean_circ: 0.907682
Ran for 128050 frames Cell Events: 4025 mean_circ: 0.907652
Ran for 128550 frames Cell Events: 4041 mean_circ: 0.907741
Ran for 129550 frames Cell Events: 4064 mean_circ: 0.907768
Ran for 130050 frames Cell Events: 4083 mean_circ: 0.907692
Ran for 130550 frames Cell Events: 4098 mean_circ: 0.907738
Ran for 132550 frames Cell Events: 4175 mean_circ: 0.907736
Ran for 133050 frames Cell Events: 4190 mean_circ: 0.90775
Ran for 133550 frames Cell Events: 4208 mean_circ: 0.907707
Ran for 134050 frames Cell Events: 4228 mean_circ: 0.907723
Ran for 134550 frames Cell Events: 4243 mean_circ: 0.907803
Ran for 135050 frames Cell Events: 4264 mean_circ: 0.907785
Ran for 135550 frames Cell Events: 4274 mean_circ: 0.907874
Ran for 136050 frames Cell Events: 4288 mean_circ: 0.907803
Ran for 136550 frames Cell Events: 4310 mean_circ: 0.907673
Ran for 137550 frames Cell Events: 4339 mean_circ: 0.907754
Ran for 138050 frames Cell Events: 4349 mean_circ: 0.90785
Ran for 139050 frames Cell Events: 4378 mean_circ: 0.907678
Ran for 139550 frames Cell Events: 4394 mean_circ: 0.907629
Ran for 140050 frames Cell Events: 4413 mean_circ: 0.907619
Ran for 141550 frames Cell Events: 4469 mean_circ: 0.907814
Ran for 142050 frames Cell Events: 4479 mean_circ: 0.907846
Ran for 143550 frames Cell Events: 4540 mean_circ: 0.90778
Ran for 144550 frames Cell Events: 4576 mean_circ: 0.907633
Ran for 145550 frames Cell Events: 4603 mean_circ: 0.907641
Ran for 146550 frames Cell Events: 4643 mean_circ: 0.907617
Ran for 147550 frames Cell Events: 4669 mean_circ: 0.907697
Ran for 148050 frames Cell Events: 4691 mean_circ: 0.907704
Ran for 148550 frames Cell Events: 4708 mean_circ: 0.907811
Ran for 149050 frames Cell Events: 4730 mean_circ: 0.90792
Ran for 151050 frames Cell Events: 4795 mean_circ: 0.907963
Ran for 151550 frames Cell Events: 4820 mean_circ: 0.907907
Ran for 152050 frames Cell Events: 4842 mean_circ: 0.907976
Ran for 153050 frames Cell Events: 4864 mean_circ: 0.908053
Ran for 153550 frames Cell Events: 4877 mean_circ: 0.908074
Ran for 154550 frames Cell Events: 4923 mean_circ: 0.908145
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Ran for 157550 frames Cell Events: 5024 mean_circ: 0.908104
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Ran for 162050 frames Cell Events: 5175 mean_circ: 0.908214
Ran for 162550 frames Cell Events: 5188 mean_circ: 0.908063
Ran for 163050 frames Cell Events: 5202 mean_circ: 0.90804
Ran for 163550 frames Cell Events: 5213 mean_circ: 0.90798
Ran for 164050 frames Cell Events: 5229 mean_circ: 0.907965
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Ran for 166050 frames Cell Events: 5299 mean_circ: 0.907868
Ran for 167050 frames Cell Events: 5330 mean_circ: 0.907871
Ran for 167550 frames Cell Events: 5333 mean_circ: 0.907897
Ran for 168050 frames Cell Events: 5347 mean_circ: 0.907885
Ran for 169050 frames Cell Events: 5379 mean_circ: 0.907892
Ran for 169550 frames Cell Events: 5394 mean_circ: 0.907959
Ran for 170050 frames Cell Events: 5417 mean_circ: 0.907871
Ran for 171050 frames Cell Events: 5449 mean_circ: 0.907894
Ran for 171550 frames Cell Events: 5469 mean_circ: 0.907853
Ran for 172050 frames Cell Events: 5487 mean_circ: 0.907804
Ran for 172550 frames Cell Events: 5505 mean_circ: 0.907809
Ran for 173550 frames Cell Events: 5524 mean_circ: 0.90788
Ran for 174050 frames Cell Events: 5533 mean_circ: 0.907844
Ran for 174550 frames Cell Events: 5548 mean_circ: 0.907859
Ran for 175050 frames Cell Events: 5557 mean_circ: 0.907857
Ran for 175550 frames Cell Events: 5571 mean_circ: 0.907755
Ran for 176050 frames Cell Events: 5582 mean_circ: 0.907797
Ran for 178050 frames Cell Events: 5642 mean_circ: 0.907683
Ran for 178550 frames Cell Events: 5665 mean_circ: 0.907598
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Ran for 180050 frames Cell Events: 5715 mean_circ: 0.90741
Ran for 182050 frames Cell Events: 5782 mean_circ: 0.907232
Ran for 183550 frames Cell Events: 5822 mean_circ: 0.907177
Ran for 184050 frames Cell Events: 5843 mean_circ: 0.907189
Ran for 185050 frames Cell Events: 5872 mean_circ: 0.907266
Ran for 185550 frames Cell Events: 5884 mean_circ: 0.907331
Ran for 186050 frames Cell Events: 5904 mean_circ: 0.907298
Ran for 187050 frames Cell Events: 5931 mean_circ: 0.907155
Ran for 187550 frames Cell Events: 5943 mean_circ: 0.907187
Ran for 189050 frames Cell Events: 5993 mean_circ: 0.907062
Ran for 189550 frames Cell Events: 6006 mean_circ: 0.907035
Ran for 190050 frames Cell Events: 6028 mean_circ: 0.907035
Ran for 191050 frames Cell Events: 6063 mean_circ: 0.907172
Ran for 191550 frames Cell Events: 6082 mean_circ: 0.907161
Ran for 192050 frames Cell Events: 6100 mean_circ: 0.907176
Ran for 193550 frames Cell Events: 6165 mean_circ: 0.907001
Ran for 194050 frames Cell Events: 6187 mean_circ: 0.907056
Ran for 194550 frames Cell Events: 6200 mean_circ: 0.907049
Ran for 195050 frames Cell Events: 6210 mean_circ: 0.907077
Ran for 197050 frames Cell Events: 6290 mean_circ: 0.906975
Ran for 197550 frames Cell Events: 6304 mean_circ: 0.906929
Ran for 198050 frames Cell Events: 6324 mean_circ: 0.90691
Ran for 198550 frames Cell Events: 6336 mean_circ: 0.906967
Ran for 200050 frames Cell Events: 6399 mean_circ: 0.907064
Ran for 200550 frames Cell Events: 6410 mean_circ: 0.907063
Ran for 201050 frames Cell Events: 6426 mean_circ: 0.907059
Ran for 201550 frames Cell Events: 6452 mean_circ: 0.907164
Ran for 203050 frames Cell Events: 6512 mean_circ: 0.907135
Ran for 204550 frames Cell Events: 6553 mean_circ: 0.907177
Ran for 205550 frames Cell Events: 6581 mean_circ: 0.907253
Ran for 206550 frames Cell Events: 6610 mean_circ: 0.907181
Ran for 207550 frames Cell Events: 6651 mean_circ: 0.90707
Ran for 208050 frames Cell Events: 6662 mean_circ: 0.90707
Ran for 208550 frames Cell Events: 6676 mean_circ: 0.907067
Ran for 209050 frames Cell Events: 6696 mean_circ: 0.907169
Ran for 209550 frames Cell Events: 6705 mean_circ: 0.907182
Ran for 210550 frames Cell Events: 6733 mean_circ: 0.907055
Ran for 211050 frames Cell Events: 6756 mean_circ: 0.907051
Ran for 211550 frames Cell Events: 6768 mean_circ: 0.907066
Ran for 212550 frames Cell Events: 6797 mean_circ: 0.907088
Ran for 213050 frames Cell Events: 6812 mean_circ: 0.90712
Ran for 213550 frames Cell Events: 6825 mean_circ: 0.907151
Ran for 214550 frames Cell Events: 6882 mean_circ: 0.907109
Ran for 216050 frames Cell Events: 6923 mean_circ: 0.90715
Ran for 216550 frames Cell Events: 6934 mean_circ: 0.907123
Ran for 217550 frames Cell Events: 6963 mean_circ: 0.907148
Ran for 218550 frames Cell Events: 7005 mean_circ: 0.907181
Ran for 219550 frames Cell Events: 7043 mean_circ: 0.90719
Ran for 220550 frames Cell Events: 7084 mean_circ: 0.907148
Ran for 221050 frames Cell Events: 7093 mean_circ: 0.907171
Ran for 221550 frames Cell Events: 7107 mean_circ: 0.907181
Ran for 222050 frames Cell Events: 7128 mean_circ: 0.907221
Ran for 222550 frames Cell Events: 7143 mean_circ: 0.907259
Ran for 223550 frames Cell Events: 7193 mean_circ: 0.907225
Ran for 224050 frames Cell Events: 7209 mean_circ: 0.907217
Ran for 224550 frames Cell Events: 7223 mean_circ: 0.907213
Ran for 225050 frames Cell Events: 7236 mean_circ: 0.907214
Ran for 225550 frames Cell Events: 7245 mean_circ: 0.907226
Ran for 226050 frames Cell Events: 7257 mean_circ: 0.907211
Ran for 227050 frames Cell Events: 7284 mean_circ: 0.907068
Ran for 227550 frames Cell Events: 7296 mean_circ: 0.907104
Ran for 228050 frames Cell Events: 7312 mean_circ: 0.907129
Ran for 228550 frames Cell Events: 7331 mean_circ: 0.90709
Ran for 229050 frames Cell Events: 7343 mean_circ: 0.907115
Ran for 229550 frames Cell Events: 7361 mean_circ: 0.907204
Ran for 230050 frames Cell Events: 7378 mean_circ: 0.907236
Ran for 230550 frames Cell Events: 7393 mean_circ: 0.907279
Ran for 231550 frames Cell Events: 7418 mean_circ: 0.907213
Ran for 232050 frames Cell Events: 7436 mean_circ: 0.907255
Ran for 233050 frames Cell Events: 7478 mean_circ: 0.907236
Ran for 234050 frames Cell Events: 7497 mean_circ: 0.907168
Ran for 234550 frames Cell Events: 7510 mean_circ: 0.907186
Ran for 235050 frames Cell Events: 7521 mean_circ: 0.907201
Ran for 235550 frames Cell Events: 7544 mean_circ: 0.907185
Ran for 236050 frames Cell Events: 7558 mean_circ: 0.907132
Ran for 237050 frames Cell Events: 7596 mean_circ: 0.907089
Ran for 237550 frames Cell Events: 7617 mean_circ: 0.90708
Ran for 238050 frames Cell Events: 7631 mean_circ: 0.907114
Ran for 239550 frames Cell Events: 7683 mean_circ: 0.907017
Ran for 240050 frames Cell Events: 7699 mean_circ: 0.907035
Ran for 241550 frames Cell Events: 7758 mean_circ: 0.907013
Ran for 242050 frames Cell Events: 7768 mean_circ: 0.906994
Ran for 242550 frames Cell Events: 7783 mean_circ: 0.906973
Ran for 243050 frames Cell Events: 7799 mean_circ: 0.90692
Ran for 244050 frames Cell Events: 7827 mean_circ: 0.906897
Ran for 244550 frames Cell Events: 7841 mean_circ: 0.90683
Ran for 245050 frames Cell Events: 7859 mean_circ: 0.906821
Ran for 246550 frames Cell Events: 7919 mean_circ: 0.906681
Ran for 248550 frames Cell Events: 7984 mean_circ: 0.906748
Ran for 249050 frames Cell Events: 7996 mean_circ: 0.906792
Ran for 249550 frames Cell Events: 8012 mean_circ: 0.906786
Ran for 250050 frames Cell Events: 8031 mean_circ: 0.906739
Ran for 252050 frames Cell Events: 8101 mean_circ: 0.906734
Ran for 253050 frames Cell Events: 8143 mean_circ: 0.906679
Ran for 254050 frames Cell Events: 8173 mean_circ: 0.906725
Ran for 255050 frames Cell Events: 8208 mean_circ: 0.906734
Ran for 256550 frames Cell Events: 8262 mean_circ: 0.906611
Ran for 257050 frames Cell Events: 8284 mean_circ: 0.906608
Ran for 257550 frames Cell Events: 8304 mean_circ: 0.906701
Ran for 259550 frames Cell Events: 8370 mean_circ: 0.906687
Ran for 260050 frames Cell Events: 8387 mean_circ: 0.906627
Ran for 260550 frames Cell Events: 8406 mean_circ: 0.906665
Ran for 261550 frames Cell Events: 8450 mean_circ: 0.906656
Ran for 262050 frames Cell Events: 8478 mean_circ: 0.906676
Ran for 262550 frames Cell Events: 8489 mean_circ: 0.90671
Ran for 263050 frames Cell Events: 8504 mean_circ: 0.906701
Ran for 264050 frames Cell Events: 8545 mean_circ: 0.906751
Ran for 264550 frames Cell Events: 8557 mean_circ: 0.906777
Ran for 265550 frames Cell Events: 8589 mean_circ: 0.906784
Ran for 266550 frames Cell Events: 8623 mean_circ: 0.90681
Ran for 267050 frames Cell Events: 8637 mean_circ: 0.906787
Ran for 269550 frames Cell Events: 8732 mean_circ: 0.906885
Ran for 270050 frames Cell Events: 8759 mean_circ: 0.906909
Ran for 270550 frames Cell Events: 8771 mean_circ: 0.906862
Ran for 271050 frames Cell Events: 8781 mean_circ: 0.906844
Ran for 271550 frames Cell Events: 8793 mean_circ: 0.906858
Ran for 272050 frames Cell Events: 8805 mean_circ: 0.906827
Ran for 273050 frames Cell Events: 8836 mean_circ: 0.90687
Ran for 273550 frames Cell Events: 8853 mean_circ: 0.906795
Ran for 275050 frames Cell Events: 8908 mean_circ: 0.906744
Ran for 275550 frames Cell Events: 8930 mean_circ: 0.90677
Ran for 276050 frames Cell Events: 8952 mean_circ: 0.906829
Ran for 276550 frames Cell Events: 8975 mean_circ: 0.906884
Ran for 277050 frames Cell Events: 8984 mean_circ: 0.906902
Ran for 278050 frames Cell Events: 9019 mean_circ: 0.906848
Ran for 278550 frames Cell Events: 9033 mean_circ: 0.906849
Ran for 279050 frames Cell Events: 9055 mean_circ: 0.906869
Ran for 279550 frames Cell Events: 9067 mean_circ: 0.906852
Ran for 281050 frames Cell Events: 9119 mean_circ: 0.906896
Ran for 281550 frames Cell Events: 9131 mean_circ: 0.906899
Ran for 282050 frames Cell Events: 9148 mean_circ: 0.906893
Ran for 282550 frames Cell Events: 9167 mean_circ: 0.906906
Ran for 283550 frames Cell Events: 9202 mean_circ: 0.906889
Ran for 284550 frames Cell Events: 9235 mean_circ: 0.906971
Ran for 285550 frames Cell Events: 9259 mean_circ: 0.906935
Ran for 286550 frames Cell Events: 9283 mean_circ: 0.906988
Ran for 287550 frames Cell Events: 9309 mean_circ: 0.907044
Ran for 288050 frames Cell Events: 9332 mean_circ: 0.907037
Ran for 288550 frames Cell Events: 9346 mean_circ: 0.907049
Ran for 289550 frames Cell Events: 9381 mean_circ: 0.907012
Ran for 290050 frames Cell Events: 9397 mean_circ: 0.907018
End this measurment..
Stopping time: 1.92124e+009
****************************************
Measurement finished
Mean Circularitiy: 0.907013
Mean Area: 607.653
Mean FL-1 intensity: 3231.08
Mean FL-2 intensity: 4769.91
Mean FL-3 intensity: 0
frames processed: 289866
Total Time: 145393ms
Number of Runs (new bg img) 0
Frames collected: 290561
Skipped frames: 3615
Rescued Frames: 463862
Samples DAQ: 72640299
Samples written: 145280476
Samples per Channel: 72640238
FPS: 1998.45
Samples per second: 499612
Expected samples/s: 500000
Events: 9417
Events per second: 64.7691
jumped back (PMT): 17
#Frames read, frequency
# 0 frames :411268
# 1 frames :148886
# 2 frames :5560
# 3 frames :2303
# 4 frames :1333
# 5 frames :598
# 6 frames :1456
# 7 frames :2060
# 8 frames :1543
# 9 frames :1003
# 10 frames :1064
# 11 frames :812
# 12 frames :673
# 13 frames :483
# 14 frames :349
# 15 frames :309
# 16 frames :298
# 17 frames :237
# 18 frames :173
# 19 frames :132
# 20 frames :100
# 21 frames :79
# 22 frames :57
# 23 frames :44
# 24 frames :36
# 25 frames :42
# 26 frames :31
# 27 frames :22
# 28 frames :11
# 29 frames :12
# 30 frames :7
# 31 frames :10
# 32 frames :6
# 33 frames :6
# 34 frames :8
# 35 frames :5
# 36 frames :8
# 37 frames :4
# 39 frames :2
# 40 frames :2
# 41 frames :1
# 42 frames :4
# 43 frames :1
# 44 frames :1
# 46 frames :1
# 47 frames :1
# 55 frames :1
# 65 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.5894
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0