Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.52.19
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "1be4553f397a26e2fa9d603102e77681",
"name": "M1_20170606_1719_dsRNA_O8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:52:40"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.1158
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.93298e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.937164
Ran for 1050 frames Cell Events: 29 mean_circ: 0.966207
Ran for 2050 frames Cell Events: 76 mean_circ: 0.955635
Ran for 4050 frames Cell Events: 127 mean_circ: 0.950738
Ran for 4550 frames Cell Events: 140 mean_circ: 0.948928
Ran for 5050 frames Cell Events: 161 mean_circ: 0.948499
Ran for 6050 frames Cell Events: 189 mean_circ: 0.946136
Ran for 7550 frames Cell Events: 238 mean_circ: 0.946136
Ran for 8050 frames Cell Events: 248 mean_circ: 0.947082
Ran for 8550 frames Cell Events: 263 mean_circ: 0.947717
Ran for 9050 frames Cell Events: 277 mean_circ: 0.947501
Ran for 9550 frames Cell Events: 284 mean_circ: 0.946786
Ran for 10550 frames Cell Events: 318 mean_circ: 0.947654
Ran for 11050 frames Cell Events: 335 mean_circ: 0.947492
Ran for 11550 frames Cell Events: 359 mean_circ: 0.947381
Ran for 13050 frames Cell Events: 402 mean_circ: 0.947603
Ran for 13550 frames Cell Events: 421 mean_circ: 0.948019
Ran for 15050 frames Cell Events: 480 mean_circ: 0.948196
Ran for 16050 frames Cell Events: 522 mean_circ: 0.948527
Ran for 16550 frames Cell Events: 535 mean_circ: 0.947875
Ran for 17050 frames Cell Events: 556 mean_circ: 0.948043
Ran for 17550 frames Cell Events: 572 mean_circ: 0.947932
Ran for 18550 frames Cell Events: 593 mean_circ: 0.94811
Ran for 21550 frames Cell Events: 697 mean_circ: 0.947918
Ran for 22550 frames Cell Events: 741 mean_circ: 0.948038
Ran for 23050 frames Cell Events: 757 mean_circ: 0.94817
Ran for 23550 frames Cell Events: 763 mean_circ: 0.9483
Ran for 24050 frames Cell Events: 782 mean_circ: 0.948379
Ran for 24550 frames Cell Events: 808 mean_circ: 0.94849
Ran for 26050 frames Cell Events: 851 mean_circ: 0.948119
Ran for 27050 frames Cell Events: 882 mean_circ: 0.947901
Ran for 27550 frames Cell Events: 897 mean_circ: 0.947923
Ran for 29550 frames Cell Events: 957 mean_circ: 0.947599
Ran for 30050 frames Cell Events: 983 mean_circ: 0.947678
Ran for 30550 frames Cell Events: 998 mean_circ: 0.947874
Ran for 32050 frames Cell Events: 1045 mean_circ: 0.947712
Ran for 32550 frames Cell Events: 1053 mean_circ: 0.947778
Ran for 33050 frames Cell Events: 1069 mean_circ: 0.947905
Ran for 33550 frames Cell Events: 1094 mean_circ: 0.947812
Ran for 34050 frames Cell Events: 1114 mean_circ: 0.947685
Ran for 34550 frames Cell Events: 1126 mean_circ: 0.947616
Ran for 35550 frames Cell Events: 1157 mean_circ: 0.947466
Ran for 36050 frames Cell Events: 1173 mean_circ: 0.94761
Ran for 36550 frames Cell Events: 1179 mean_circ: 0.947659
Ran for 37050 frames Cell Events: 1196 mean_circ: 0.947725
Ran for 38550 frames Cell Events: 1236 mean_circ: 0.947613
Ran for 39050 frames Cell Events: 1248 mean_circ: 0.947442
Ran for 39550 frames Cell Events: 1263 mean_circ: 0.94744
Ran for 40050 frames Cell Events: 1285 mean_circ: 0.947323
Ran for 40550 frames Cell Events: 1305 mean_circ: 0.947267
Ran for 42050 frames Cell Events: 1377 mean_circ: 0.946914
Ran for 42550 frames Cell Events: 1397 mean_circ: 0.946868
Ran for 43550 frames Cell Events: 1446 mean_circ: 0.947127
Ran for 44050 frames Cell Events: 1465 mean_circ: 0.94658
Ran for 44550 frames Cell Events: 1486 mean_circ: 0.9467
Ran for 45050 frames Cell Events: 1499 mean_circ: 0.946736
Ran for 45550 frames Cell Events: 1508 mean_circ: 0.946726
Ran for 46050 frames Cell Events: 1530 mean_circ: 0.946662
Ran for 46550 frames Cell Events: 1546 mean_circ: 0.946673
Ran for 47050 frames Cell Events: 1557 mean_circ: 0.946728
Ran for 48050 frames Cell Events: 1582 mean_circ: 0.946424
Ran for 48550 frames Cell Events: 1601 mean_circ: 0.946514
Ran for 49050 frames Cell Events: 1626 mean_circ: 0.946554
Ran for 49550 frames Cell Events: 1648 mean_circ: 0.946555
Ran for 50050 frames Cell Events: 1661 mean_circ: 0.946433
Ran for 50550 frames Cell Events: 1670 mean_circ: 0.946482
Ran for 51050 frames Cell Events: 1688 mean_circ: 0.946523
Ran for 51550 frames Cell Events: 1705 mean_circ: 0.94661
Ran for 52550 frames Cell Events: 1735 mean_circ: 0.946736
Ran for 53050 frames Cell Events: 1748 mean_circ: 0.946642
Ran for 55050 frames Cell Events: 1817 mean_circ: 0.946382
Ran for 55550 frames Cell Events: 1826 mean_circ: 0.946427
Ran for 56050 frames Cell Events: 1836 mean_circ: 0.946406
Ran for 56550 frames Cell Events: 1850 mean_circ: 0.946246
Ran for 57050 frames Cell Events: 1869 mean_circ: 0.946214
Ran for 57550 frames Cell Events: 1888 mean_circ: 0.946178
Ran for 58050 frames Cell Events: 1908 mean_circ: 0.946079
Ran for 58550 frames Cell Events: 1923 mean_circ: 0.946042
Ran for 59050 frames Cell Events: 1943 mean_circ: 0.946067
Ran for 59550 frames Cell Events: 1950 mean_circ: 0.945969
Ran for 60050 frames Cell Events: 1966 mean_circ: 0.946038
Ran for 60550 frames Cell Events: 1977 mean_circ: 0.946002
Ran for 61050 frames Cell Events: 1987 mean_circ: 0.946016
Ran for 61550 frames Cell Events: 2005 mean_circ: 0.946001
Ran for 62050 frames Cell Events: 2017 mean_circ: 0.946033
Ran for 63050 frames Cell Events: 2044 mean_circ: 0.945994
Ran for 65050 frames Cell Events: 2116 mean_circ: 0.946334
Ran for 65550 frames Cell Events: 2125 mean_circ: 0.946323
Ran for 66550 frames Cell Events: 2159 mean_circ: 0.946117
Ran for 67050 frames Cell Events: 2177 mean_circ: 0.946034
Ran for 67550 frames Cell Events: 2191 mean_circ: 0.94603
Ran for 68550 frames Cell Events: 2224 mean_circ: 0.946034
Ran for 69550 frames Cell Events: 2255 mean_circ: 0.945796
Ran for 70550 frames Cell Events: 2284 mean_circ: 0.945908
Ran for 71050 frames Cell Events: 2299 mean_circ: 0.94594
Ran for 72050 frames Cell Events: 2331 mean_circ: 0.945835
Ran for 72550 frames Cell Events: 2348 mean_circ: 0.945753
Ran for 73050 frames Cell Events: 2369 mean_circ: 0.945837
Ran for 73550 frames Cell Events: 2382 mean_circ: 0.945833
Ran for 74550 frames Cell Events: 2420 mean_circ: 0.945608
Ran for 75050 frames Cell Events: 2429 mean_circ: 0.945542
Ran for 75550 frames Cell Events: 2442 mean_circ: 0.945519
Ran for 76550 frames Cell Events: 2477 mean_circ: 0.94559
Ran for 77050 frames Cell Events: 2485 mean_circ: 0.945618
Ran for 77550 frames Cell Events: 2496 mean_circ: 0.945656
Ran for 78050 frames Cell Events: 2517 mean_circ: 0.945626
Ran for 79550 frames Cell Events: 2568 mean_circ: 0.94561
Ran for 80050 frames Cell Events: 2584 mean_circ: 0.945571
Ran for 80550 frames Cell Events: 2606 mean_circ: 0.945618
Ran for 81050 frames Cell Events: 2622 mean_circ: 0.945471
Ran for 81550 frames Cell Events: 2638 mean_circ: 0.945446
Ran for 82050 frames Cell Events: 2651 mean_circ: 0.945456
Ran for 82550 frames Cell Events: 2660 mean_circ: 0.945354
Ran for 83050 frames Cell Events: 2675 mean_circ: 0.945262
Ran for 83550 frames Cell Events: 2688 mean_circ: 0.945272
Ran for 85050 frames Cell Events: 2739 mean_circ: 0.945293
Ran for 86050 frames Cell Events: 2772 mean_circ: 0.945301
Ran for 86550 frames Cell Events: 2793 mean_circ: 0.945256
Ran for 87050 frames Cell Events: 2823 mean_circ: 0.945271
Ran for 88050 frames Cell Events: 2857 mean_circ: 0.945203
Ran for 88550 frames Cell Events: 2874 mean_circ: 0.945182
Ran for 89050 frames Cell Events: 2886 mean_circ: 0.945135
Ran for 90050 frames Cell Events: 2936 mean_circ: 0.945072
Ran for 90550 frames Cell Events: 2955 mean_circ: 0.945111
Ran for 91050 frames Cell Events: 2971 mean_circ: 0.945223
Ran for 91550 frames Cell Events: 2989 mean_circ: 0.945329
Ran for 92050 frames Cell Events: 3000 mean_circ: 0.945364
Ran for 92550 frames Cell Events: 3019 mean_circ: 0.945295
Ran for 93550 frames Cell Events: 3058 mean_circ: 0.945257
Ran for 94050 frames Cell Events: 3071 mean_circ: 0.945275
Ran for 94550 frames Cell Events: 3078 mean_circ: 0.945327
Ran for 95550 frames Cell Events: 3104 mean_circ: 0.94531
Ran for 96050 frames Cell Events: 3120 mean_circ: 0.945227
Ran for 97550 frames Cell Events: 3180 mean_circ: 0.945039
Ran for 98550 frames Cell Events: 3222 mean_circ: 0.945115
Ran for 99050 frames Cell Events: 3233 mean_circ: 0.945136
Ran for 99550 frames Cell Events: 3254 mean_circ: 0.945192
Ran for 100050 frames Cell Events: 3275 mean_circ: 0.945166
Ran for 101050 frames Cell Events: 3311 mean_circ: 0.945019
Ran for 101550 frames Cell Events: 3325 mean_circ: 0.944949
Ran for 102050 frames Cell Events: 3342 mean_circ: 0.944959
Ran for 102550 frames Cell Events: 3358 mean_circ: 0.94498
Ran for 103050 frames Cell Events: 3378 mean_circ: 0.944932
Ran for 103550 frames Cell Events: 3388 mean_circ: 0.944999
Ran for 104550 frames Cell Events: 3412 mean_circ: 0.944812
Ran for 105550 frames Cell Events: 3433 mean_circ: 0.944823
Ran for 106550 frames Cell Events: 3471 mean_circ: 0.944847
Ran for 107050 frames Cell Events: 3495 mean_circ: 0.944914
Ran for 107550 frames Cell Events: 3512 mean_circ: 0.944848
Ran for 108550 frames Cell Events: 3554 mean_circ: 0.944961
Ran for 109550 frames Cell Events: 3586 mean_circ: 0.94487
Ran for 110550 frames Cell Events: 3627 mean_circ: 0.944881
Ran for 111050 frames Cell Events: 3638 mean_circ: 0.944832
Ran for 111550 frames Cell Events: 3643 mean_circ: 0.944808
Ran for 112050 frames Cell Events: 3655 mean_circ: 0.944784
Ran for 112550 frames Cell Events: 3669 mean_circ: 0.944801
Ran for 113050 frames Cell Events: 3692 mean_circ: 0.9448
Ran for 113550 frames Cell Events: 3707 mean_circ: 0.944778
Ran for 114050 frames Cell Events: 3731 mean_circ: 0.944803
Ran for 114550 frames Cell Events: 3746 mean_circ: 0.944793
Ran for 115050 frames Cell Events: 3761 mean_circ: 0.944802
Ran for 115550 frames Cell Events: 3777 mean_circ: 0.944794
Ran for 116050 frames Cell Events: 3794 mean_circ: 0.944794
Ran for 116550 frames Cell Events: 3811 mean_circ: 0.9448
Ran for 118050 frames Cell Events: 3850 mean_circ: 0.944861
Ran for 119050 frames Cell Events: 3892 mean_circ: 0.944937
Ran for 119550 frames Cell Events: 3905 mean_circ: 0.944966
Ran for 120050 frames Cell Events: 3919 mean_circ: 0.944987
Ran for 124550 frames Cell Events: 4105 mean_circ: 0.945069
Ran for 125050 frames Cell Events: 4115 mean_circ: 0.945076
Ran for 125550 frames Cell Events: 4143 mean_circ: 0.945059
Ran for 126050 frames Cell Events: 4157 mean_circ: 0.945043
Ran for 126550 frames Cell Events: 4172 mean_circ: 0.945117
Ran for 127050 frames Cell Events: 4190 mean_circ: 0.945182
Ran for 128050 frames Cell Events: 4226 mean_circ: 0.945203
Ran for 128550 frames Cell Events: 4238 mean_circ: 0.945216
Ran for 129050 frames Cell Events: 4260 mean_circ: 0.945189
Ran for 129550 frames Cell Events: 4272 mean_circ: 0.945199
Ran for 130050 frames Cell Events: 4281 mean_circ: 0.945163
Ran for 130550 frames Cell Events: 4291 mean_circ: 0.945151
Ran for 131050 frames Cell Events: 4307 mean_circ: 0.945109
Ran for 133050 frames Cell Events: 4381 mean_circ: 0.945229
Ran for 133550 frames Cell Events: 4387 mean_circ: 0.945206
Ran for 134050 frames Cell Events: 4396 mean_circ: 0.945214
Ran for 134550 frames Cell Events: 4407 mean_circ: 0.945217
Ran for 135050 frames Cell Events: 4419 mean_circ: 0.945223
Ran for 136050 frames Cell Events: 4453 mean_circ: 0.945317
Ran for 136550 frames Cell Events: 4462 mean_circ: 0.945323
Ran for 137550 frames Cell Events: 4495 mean_circ: 0.945385
Ran for 138550 frames Cell Events: 4526 mean_circ: 0.945379
Ran for 139050 frames Cell Events: 4550 mean_circ: 0.945364
Ran for 139550 frames Cell Events: 4561 mean_circ: 0.945336
Ran for 140050 frames Cell Events: 4579 mean_circ: 0.945325
Ran for 142050 frames Cell Events: 4648 mean_circ: 0.945255
Ran for 142550 frames Cell Events: 4666 mean_circ: 0.945281
Ran for 143050 frames Cell Events: 4687 mean_circ: 0.945294
Ran for 143550 frames Cell Events: 4699 mean_circ: 0.945304
Ran for 144550 frames Cell Events: 4739 mean_circ: 0.945238
Ran for 145050 frames Cell Events: 4755 mean_circ: 0.945233
Ran for 147050 frames Cell Events: 4808 mean_circ: 0.945304
Ran for 147550 frames Cell Events: 4824 mean_circ: 0.945233
Ran for 148050 frames Cell Events: 4848 mean_circ: 0.94525
Ran for 149050 frames Cell Events: 4878 mean_circ: 0.945187
Ran for 149550 frames Cell Events: 4897 mean_circ: 0.945142
Ran for 150550 frames Cell Events: 4939 mean_circ: 0.945172
Ran for 151050 frames Cell Events: 4955 mean_circ: 0.945203
Ran for 152050 frames Cell Events: 4994 mean_circ: 0.945265
Ran for 153050 frames Cell Events: 5037 mean_circ: 0.945357
Ran for 153550 frames Cell Events: 5057 mean_circ: 0.945395
Ran for 154050 frames Cell Events: 5072 mean_circ: 0.945385
Ran for 154550 frames Cell Events: 5087 mean_circ: 0.9454
Ran for 155550 frames Cell Events: 5114 mean_circ: 0.945445
Ran for 157050 frames Cell Events: 5164 mean_circ: 0.94542
Ran for 157550 frames Cell Events: 5181 mean_circ: 0.94545
Ran for 158050 frames Cell Events: 5193 mean_circ: 0.945455
Ran for 158550 frames Cell Events: 5211 mean_circ: 0.945434
Ran for 159050 frames Cell Events: 5230 mean_circ: 0.945421
Ran for 159550 frames Cell Events: 5244 mean_circ: 0.945426
Ran for 160050 frames Cell Events: 5265 mean_circ: 0.945452
Ran for 161050 frames Cell Events: 5312 mean_circ: 0.945381
Ran for 161550 frames Cell Events: 5331 mean_circ: 0.945401
Ran for 162050 frames Cell Events: 5343 mean_circ: 0.945389
Ran for 162550 frames Cell Events: 5353 mean_circ: 0.945391
Ran for 163050 frames Cell Events: 5364 mean_circ: 0.945389
Ran for 163550 frames Cell Events: 5374 mean_circ: 0.945403
Ran for 164550 frames Cell Events: 5419 mean_circ: 0.945383
Ran for 166050 frames Cell Events: 5472 mean_circ: 0.945357
Ran for 167550 frames Cell Events: 5522 mean_circ: 0.945293
Ran for 168050 frames Cell Events: 5542 mean_circ: 0.945241
Ran for 169550 frames Cell Events: 5608 mean_circ: 0.945204
Ran for 170050 frames Cell Events: 5618 mean_circ: 0.945205
Ran for 170550 frames Cell Events: 5636 mean_circ: 0.945114
Ran for 171050 frames Cell Events: 5651 mean_circ: 0.945141
Ran for 171550 frames Cell Events: 5673 mean_circ: 0.945167
Ran for 172050 frames Cell Events: 5688 mean_circ: 0.945161
Ran for 172550 frames Cell Events: 5701 mean_circ: 0.945153
Ran for 173050 frames Cell Events: 5709 mean_circ: 0.945191
Ran for 174050 frames Cell Events: 5737 mean_circ: 0.945249
Ran for 174550 frames Cell Events: 5753 mean_circ: 0.945257
Ran for 175050 frames Cell Events: 5772 mean_circ: 0.94526
Ran for 176050 frames Cell Events: 5808 mean_circ: 0.945288
Ran for 176550 frames Cell Events: 5821 mean_circ: 0.945261
Ran for 177550 frames Cell Events: 5859 mean_circ: 0.945282
Ran for 178050 frames Cell Events: 5865 mean_circ: 0.945273
Ran for 178550 frames Cell Events: 5878 mean_circ: 0.945262
Ran for 179550 frames Cell Events: 5913 mean_circ: 0.945243
Ran for 180550 frames Cell Events: 5944 mean_circ: 0.945229
Ran for 181050 frames Cell Events: 5968 mean_circ: 0.945251
Ran for 181550 frames Cell Events: 5983 mean_circ: 0.945274
Ran for 182050 frames Cell Events: 6000 mean_circ: 0.945277
Ran for 183050 frames Cell Events: 6049 mean_circ: 0.945206
Ran for 183550 frames Cell Events: 6065 mean_circ: 0.945157
Ran for 184050 frames Cell Events: 6091 mean_circ: 0.945137
Ran for 185050 frames Cell Events: 6130 mean_circ: 0.945095
Ran for 185550 frames Cell Events: 6155 mean_circ: 0.945088
Ran for 186050 frames Cell Events: 6182 mean_circ: 0.94506
Ran for 186550 frames Cell Events: 6201 mean_circ: 0.945031
Ran for 188050 frames Cell Events: 6248 mean_circ: 0.945005
Ran for 188550 frames Cell Events: 6262 mean_circ: 0.945007
Ran for 189550 frames Cell Events: 6294 mean_circ: 0.944944
Ran for 190050 frames Cell Events: 6312 mean_circ: 0.94493
Ran for 190550 frames Cell Events: 6344 mean_circ: 0.944944
Ran for 191050 frames Cell Events: 6355 mean_circ: 0.944985
Ran for 192050 frames Cell Events: 6383 mean_circ: 0.94501
Ran for 193050 frames Cell Events: 6412 mean_circ: 0.945006
Ran for 194050 frames Cell Events: 6460 mean_circ: 0.944983
Ran for 194550 frames Cell Events: 6476 mean_circ: 0.945028
Ran for 195550 frames Cell Events: 6511 mean_circ: 0.945014
Ran for 196550 frames Cell Events: 6551 mean_circ: 0.945047
Ran for 197050 frames Cell Events: 6567 mean_circ: 0.94504
Ran for 198050 frames Cell Events: 6598 mean_circ: 0.945003
Ran for 198550 frames Cell Events: 6629 mean_circ: 0.945
Ran for 199050 frames Cell Events: 6636 mean_circ: 0.945023
Ran for 199550 frames Cell Events: 6649 mean_circ: 0.944948
Ran for 200050 frames Cell Events: 6658 mean_circ: 0.944954
Ran for 202050 frames Cell Events: 6715 mean_circ: 0.944938
Ran for 203550 frames Cell Events: 6777 mean_circ: 0.944821
Ran for 204050 frames Cell Events: 6797 mean_circ: 0.944787
Ran for 204550 frames Cell Events: 6826 mean_circ: 0.944807
Ran for 205050 frames Cell Events: 6836 mean_circ: 0.944759
Ran for 205550 frames Cell Events: 6851 mean_circ: 0.944779
Ran for 207050 frames Cell Events: 6906 mean_circ: 0.944774
Ran for 207550 frames Cell Events: 6924 mean_circ: 0.944782
Ran for 208050 frames Cell Events: 6934 mean_circ: 0.944816
Ran for 208550 frames Cell Events: 6942 mean_circ: 0.944783
Ran for 210050 frames Cell Events: 6991 mean_circ: 0.944789
Ran for 210550 frames Cell Events: 7017 mean_circ: 0.944643
Ran for 211050 frames Cell Events: 7039 mean_circ: 0.944649
Ran for 211550 frames Cell Events: 7059 mean_circ: 0.944628
Ran for 212050 frames Cell Events: 7089 mean_circ: 0.944628
Ran for 212550 frames Cell Events: 7126 mean_circ: 0.944661
Ran for 213050 frames Cell Events: 7156 mean_circ: 0.944696
Ran for 214050 frames Cell Events: 7201 mean_circ: 0.94469
Ran for 214550 frames Cell Events: 7211 mean_circ: 0.944691
Ran for 215050 frames Cell Events: 7234 mean_circ: 0.944727
Ran for 215550 frames Cell Events: 7248 mean_circ: 0.944749
Ran for 216050 frames Cell Events: 7273 mean_circ: 0.944761
Ran for 216550 frames Cell Events: 7293 mean_circ: 0.944782
Ran for 218050 frames Cell Events: 7345 mean_circ: 0.94481
Ran for 218550 frames Cell Events: 7360 mean_circ: 0.944803
Ran for 220550 frames Cell Events: 7423 mean_circ: 0.944835
Ran for 221050 frames Cell Events: 7435 mean_circ: 0.944837
Ran for 221550 frames Cell Events: 7459 mean_circ: 0.944836
Ran for 222550 frames Cell Events: 7499 mean_circ: 0.944799
Ran for 224550 frames Cell Events: 7569 mean_circ: 0.944783
Ran for 225050 frames Cell Events: 7585 mean_circ: 0.944806
Ran for 226550 frames Cell Events: 7631 mean_circ: 0.944775
Ran for 227050 frames Cell Events: 7654 mean_circ: 0.944705
Ran for 227550 frames Cell Events: 7693 mean_circ: 0.944711
Ran for 228050 frames Cell Events: 7711 mean_circ: 0.944682
Ran for 228550 frames Cell Events: 7731 mean_circ: 0.944673
Ran for 229050 frames Cell Events: 7761 mean_circ: 0.944661
Ran for 229550 frames Cell Events: 7775 mean_circ: 0.944673
Ran for 230050 frames Cell Events: 7793 mean_circ: 0.944714
Ran for 230550 frames Cell Events: 7817 mean_circ: 0.944726
Ran for 231050 frames Cell Events: 7827 mean_circ: 0.944692
Ran for 231550 frames Cell Events: 7851 mean_circ: 0.944699
Ran for 232050 frames Cell Events: 7869 mean_circ: 0.944587
Ran for 232550 frames Cell Events: 7889 mean_circ: 0.944551
Ran for 233050 frames Cell Events: 7914 mean_circ: 0.944517
Ran for 233550 frames Cell Events: 7930 mean_circ: 0.944518
Ran for 234050 frames Cell Events: 7942 mean_circ: 0.944543
Ran for 235550 frames Cell Events: 8002 mean_circ: 0.944507
Ran for 236050 frames Cell Events: 8026 mean_circ: 0.944509
Ran for 236550 frames Cell Events: 8039 mean_circ: 0.944485
Ran for 237050 frames Cell Events: 8053 mean_circ: 0.94449
Ran for 237550 frames Cell Events: 8068 mean_circ: 0.944454
Ran for 239050 frames Cell Events: 8119 mean_circ: 0.944398
Ran for 239550 frames Cell Events: 8138 mean_circ: 0.944396
Ran for 240050 frames Cell Events: 8146 mean_circ: 0.944446
Ran for 240550 frames Cell Events: 8157 mean_circ: 0.94447
Ran for 241050 frames Cell Events: 8175 mean_circ: 0.944435
Ran for 242050 frames Cell Events: 8216 mean_circ: 0.94446
Ran for 242550 frames Cell Events: 8239 mean_circ: 0.9445
End this measurment..
Stopping time: 1.9331e+009
****************************************
Measurement finished
Mean Circularitiy: 0.944378
Mean Area: 636.216
Mean FL-1 intensity: 3582.2
Mean FL-2 intensity: 4630.71
Mean FL-3 intensity: 0
frames processed: 241568
Total Time: 121557ms
Number of Runs (new bg img) 0
Frames collected: 242997
Skipped frames: 90182
Rescued Frames: 1128440
Samples DAQ: 60749925
Samples written: 121498280
Samples per Channel: 60749140
FPS: 1999.04
Samples per second: 499758
Expected samples/s: 500000
Events: 8255
Events per second: 67.9105
jumped back (PMT): 4319
#Frames read, frequency
# 0 frames :346425
# 1 frames :121993
# 2 frames :4361
# 3 frames :1997
# 4 frames :1078
# 5 frames :1116
# 6 frames :1779
# 7 frames :1367
# 8 frames :905
# 9 frames :879
# 10 frames :803
# 11 frames :733
# 12 frames :469
# 13 frames :348
# 14 frames :265
# 15 frames :243
# 16 frames :161
# 17 frames :163
# 18 frames :133
# 19 frames :120
# 20 frames :124
# 21 frames :95
# 22 frames :67
# 23 frames :57
# 24 frames :30
# 25 frames :34
# 26 frames :27
# 27 frames :27
# 28 frames :22
# 29 frames :13
# 30 frames :15
# 31 frames :16
# 32 frames :13
# 33 frames :9
# 34 frames :13
# 35 frames :14
# 36 frames :9
# 37 frames :8
# 38 frames :8
# 39 frames :5
# 40 frames :2
# 41 frames :3
# 42 frames :2
# 44 frames :4
# 45 frames :2
# 46 frames :1
# 47 frames :1
# 48 frames :2
# 49 frames :1
# 50 frames :4
# 51 frames :1
# 52 frames :1
# 53 frames :1
# 58 frames :2
# 62 frames :1
# 63 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.1158
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0