Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_14.19.31
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "0f09bfa3e4b999ad73519e385b4ae089",
"name": "M1_20170608_1421_dsRNA_T6_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "12:19:52"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8135 (max 8136) in '8135'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6662
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.0951e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 7 mean_circ: 0.949946
Ran for 1550 frames Cell Events: 25 mean_circ: 0.949124
Ran for 2050 frames Cell Events: 39 mean_circ: 0.950645
Ran for 2550 frames Cell Events: 54 mean_circ: 0.946904
Ran for 3050 frames Cell Events: 69 mean_circ: 0.94442
Ran for 3550 frames Cell Events: 73 mean_circ: 0.947046
Ran for 4050 frames Cell Events: 87 mean_circ: 0.947048
Ran for 4550 frames Cell Events: 96 mean_circ: 0.946652
Ran for 5050 frames Cell Events: 111 mean_circ: 0.946202
Ran for 6550 frames Cell Events: 137 mean_circ: 0.947528
Ran for 7050 frames Cell Events: 144 mean_circ: 0.946958
Ran for 7550 frames Cell Events: 153 mean_circ: 0.946186
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Ran for 9050 frames Cell Events: 195 mean_circ: 0.945315
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Ran for 11050 frames Cell Events: 233 mean_circ: 0.946727
Ran for 11550 frames Cell Events: 243 mean_circ: 0.94642
Ran for 12550 frames Cell Events: 261 mean_circ: 0.945963
Ran for 14050 frames Cell Events: 298 mean_circ: 0.946742
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Ran for 43550 frames Cell Events: 1001 mean_circ: 0.943411
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Ran for 60050 frames Cell Events: 1323 mean_circ: 0.943017
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Ran for 61050 frames Cell Events: 1353 mean_circ: 0.942827
Ran for 62550 frames Cell Events: 1391 mean_circ: 0.942735
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Ran for 63550 frames Cell Events: 1416 mean_circ: 0.942734
Ran for 64050 frames Cell Events: 1429 mean_circ: 0.942632
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Ran for 66550 frames Cell Events: 1482 mean_circ: 0.942828
Ran for 67050 frames Cell Events: 1491 mean_circ: 0.942747
Ran for 67550 frames Cell Events: 1500 mean_circ: 0.942739
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Ran for 68550 frames Cell Events: 1513 mean_circ: 0.942697
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Ran for 71550 frames Cell Events: 1580 mean_circ: 0.942842
Ran for 73050 frames Cell Events: 1619 mean_circ: 0.942664
Ran for 73550 frames Cell Events: 1631 mean_circ: 0.942673
Ran for 74550 frames Cell Events: 1663 mean_circ: 0.942695
Ran for 75050 frames Cell Events: 1670 mean_circ: 0.942736
Ran for 75550 frames Cell Events: 1681 mean_circ: 0.942769
Ran for 76050 frames Cell Events: 1692 mean_circ: 0.942723
Ran for 76550 frames Cell Events: 1699 mean_circ: 0.942641
Ran for 77050 frames Cell Events: 1715 mean_circ: 0.942568
Ran for 77550 frames Cell Events: 1732 mean_circ: 0.9426
Ran for 80050 frames Cell Events: 1790 mean_circ: 0.942721
Ran for 80550 frames Cell Events: 1796 mean_circ: 0.942721
Ran for 81550 frames Cell Events: 1818 mean_circ: 0.942595
Ran for 82550 frames Cell Events: 1841 mean_circ: 0.942714
Ran for 83050 frames Cell Events: 1848 mean_circ: 0.942622
Ran for 83550 frames Cell Events: 1857 mean_circ: 0.942659
Ran for 84050 frames Cell Events: 1864 mean_circ: 0.942666
Ran for 84550 frames Cell Events: 1872 mean_circ: 0.942659
Ran for 85050 frames Cell Events: 1879 mean_circ: 0.942652
Ran for 85550 frames Cell Events: 1895 mean_circ: 0.942699
Ran for 86050 frames Cell Events: 1905 mean_circ: 0.942618
Ran for 86550 frames Cell Events: 1917 mean_circ: 0.942656
Ran for 87050 frames Cell Events: 1926 mean_circ: 0.94276
Ran for 87550 frames Cell Events: 1939 mean_circ: 0.942749
Ran for 88050 frames Cell Events: 1955 mean_circ: 0.942711
Ran for 88550 frames Cell Events: 1964 mean_circ: 0.942705
Ran for 89050 frames Cell Events: 1971 mean_circ: 0.942686
Ran for 90050 frames Cell Events: 1993 mean_circ: 0.94266
Ran for 91050 frames Cell Events: 2023 mean_circ: 0.942687
Ran for 91550 frames Cell Events: 2033 mean_circ: 0.942691
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Ran for 93550 frames Cell Events: 2072 mean_circ: 0.942678
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Ran for 102050 frames Cell Events: 2267 mean_circ: 0.942375
Ran for 103050 frames Cell Events: 2289 mean_circ: 0.942489
Ran for 103550 frames Cell Events: 2304 mean_circ: 0.942587
Ran for 104050 frames Cell Events: 2317 mean_circ: 0.942576
Ran for 104550 frames Cell Events: 2326 mean_circ: 0.942559
Ran for 105050 frames Cell Events: 2334 mean_circ: 0.942442
Ran for 105550 frames Cell Events: 2343 mean_circ: 0.942428
Ran for 106050 frames Cell Events: 2351 mean_circ: 0.942323
Ran for 106550 frames Cell Events: 2360 mean_circ: 0.942296
Ran for 107050 frames Cell Events: 2370 mean_circ: 0.942359
Ran for 107550 frames Cell Events: 2381 mean_circ: 0.942298
Ran for 108050 frames Cell Events: 2405 mean_circ: 0.942273
Ran for 108550 frames Cell Events: 2415 mean_circ: 0.942252
Ran for 109050 frames Cell Events: 2425 mean_circ: 0.942191
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Ran for 110550 frames Cell Events: 2472 mean_circ: 0.942172
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Ran for 112050 frames Cell Events: 2510 mean_circ: 0.942051
Ran for 112550 frames Cell Events: 2527 mean_circ: 0.942092
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Ran for 116050 frames Cell Events: 2607 mean_circ: 0.942065
Ran for 117050 frames Cell Events: 2630 mean_circ: 0.942057
Ran for 117550 frames Cell Events: 2638 mean_circ: 0.942072
Ran for 118050 frames Cell Events: 2660 mean_circ: 0.942072
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Ran for 120050 frames Cell Events: 2700 mean_circ: 0.942069
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Ran for 121050 frames Cell Events: 2728 mean_circ: 0.942096
Ran for 122050 frames Cell Events: 2758 mean_circ: 0.942093
Ran for 122550 frames Cell Events: 2769 mean_circ: 0.942101
Ran for 123050 frames Cell Events: 2776 mean_circ: 0.942115
Ran for 123550 frames Cell Events: 2788 mean_circ: 0.942057
Ran for 124050 frames Cell Events: 2804 mean_circ: 0.941957
Ran for 124550 frames Cell Events: 2818 mean_circ: 0.941969
Ran for 125550 frames Cell Events: 2844 mean_circ: 0.941953
Ran for 126050 frames Cell Events: 2859 mean_circ: 0.941865
Ran for 126550 frames Cell Events: 2870 mean_circ: 0.941852
Ran for 127550 frames Cell Events: 2889 mean_circ: 0.941908
Ran for 128050 frames Cell Events: 2902 mean_circ: 0.9419
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Ran for 131050 frames Cell Events: 2961 mean_circ: 0.941917
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Ran for 146550 frames Cell Events: 3330 mean_circ: 0.942363
Ran for 147050 frames Cell Events: 3351 mean_circ: 0.94232
Ran for 147550 frames Cell Events: 3356 mean_circ: 0.942323
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Ran for 149050 frames Cell Events: 3378 mean_circ: 0.942384
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Ran for 151050 frames Cell Events: 3431 mean_circ: 0.942306
Ran for 151550 frames Cell Events: 3448 mean_circ: 0.942279
Ran for 152050 frames Cell Events: 3463 mean_circ: 0.942246
Ran for 153050 frames Cell Events: 3490 mean_circ: 0.942234
Ran for 153550 frames Cell Events: 3506 mean_circ: 0.942268
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Ran for 157050 frames Cell Events: 3595 mean_circ: 0.942148
Ran for 157550 frames Cell Events: 3615 mean_circ: 0.94216
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Ran for 158550 frames Cell Events: 3641 mean_circ: 0.942142
Ran for 159050 frames Cell Events: 3650 mean_circ: 0.942098
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Ran for 162550 frames Cell Events: 3728 mean_circ: 0.942072
Ran for 163050 frames Cell Events: 3741 mean_circ: 0.942104
Ran for 163550 frames Cell Events: 3756 mean_circ: 0.942104
Ran for 164550 frames Cell Events: 3779 mean_circ: 0.942048
Ran for 165050 frames Cell Events: 3782 mean_circ: 0.942047
Ran for 166050 frames Cell Events: 3803 mean_circ: 0.942141
Ran for 167050 frames Cell Events: 3832 mean_circ: 0.942267
Ran for 167550 frames Cell Events: 3848 mean_circ: 0.942293
Ran for 168050 frames Cell Events: 3865 mean_circ: 0.942294
Ran for 169050 frames Cell Events: 3896 mean_circ: 0.942256
Ran for 169550 frames Cell Events: 3913 mean_circ: 0.942217
Ran for 170050 frames Cell Events: 3926 mean_circ: 0.942229
Ran for 170550 frames Cell Events: 3935 mean_circ: 0.942182
Ran for 171050 frames Cell Events: 3943 mean_circ: 0.942195
Ran for 172050 frames Cell Events: 3965 mean_circ: 0.942149
Ran for 173050 frames Cell Events: 3999 mean_circ: 0.942254
Ran for 173550 frames Cell Events: 4006 mean_circ: 0.942278
Ran for 174050 frames Cell Events: 4017 mean_circ: 0.942335
Ran for 174550 frames Cell Events: 4027 mean_circ: 0.942316
Ran for 175050 frames Cell Events: 4034 mean_circ: 0.942275
Ran for 176050 frames Cell Events: 4061 mean_circ: 0.94232
Ran for 177050 frames Cell Events: 4090 mean_circ: 0.942368
Ran for 178050 frames Cell Events: 4116 mean_circ: 0.942327
Ran for 178550 frames Cell Events: 4132 mean_circ: 0.942371
Ran for 179050 frames Cell Events: 4152 mean_circ: 0.942424
Ran for 180550 frames Cell Events: 4215 mean_circ: 0.942575
Ran for 181050 frames Cell Events: 4228 mean_circ: 0.942585
Ran for 181550 frames Cell Events: 4242 mean_circ: 0.942541
Ran for 182050 frames Cell Events: 4263 mean_circ: 0.942566
Ran for 182550 frames Cell Events: 4276 mean_circ: 0.942519
Ran for 183050 frames Cell Events: 4288 mean_circ: 0.942499
Ran for 183550 frames Cell Events: 4310 mean_circ: 0.942528
Ran for 184050 frames Cell Events: 4317 mean_circ: 0.942518
Ran for 185050 frames Cell Events: 4339 mean_circ: 0.942542
Ran for 186050 frames Cell Events: 4380 mean_circ: 0.942623
Ran for 187050 frames Cell Events: 4398 mean_circ: 0.942636
Ran for 187550 frames Cell Events: 4414 mean_circ: 0.942683
Ran for 188550 frames Cell Events: 4451 mean_circ: 0.942591
Ran for 189050 frames Cell Events: 4460 mean_circ: 0.94241
Ran for 189550 frames Cell Events: 4476 mean_circ: 0.942427
Ran for 190550 frames Cell Events: 4501 mean_circ: 0.942347
Ran for 191550 frames Cell Events: 4527 mean_circ: 0.942412
Ran for 192050 frames Cell Events: 4532 mean_circ: 0.942425
Ran for 193050 frames Cell Events: 4562 mean_circ: 0.942377
Ran for 193550 frames Cell Events: 4580 mean_circ: 0.942391
Ran for 194050 frames Cell Events: 4589 mean_circ: 0.942369
Ran for 194550 frames Cell Events: 4599 mean_circ: 0.942356
Ran for 195050 frames Cell Events: 4608 mean_circ: 0.942372
Ran for 195550 frames Cell Events: 4619 mean_circ: 0.942397
Ran for 196050 frames Cell Events: 4627 mean_circ: 0.942356
Ran for 196550 frames Cell Events: 4641 mean_circ: 0.942368
Ran for 197050 frames Cell Events: 4656 mean_circ: 0.942365
Ran for 197550 frames Cell Events: 4666 mean_circ: 0.942356
Ran for 198050 frames Cell Events: 4677 mean_circ: 0.94234
Ran for 198550 frames Cell Events: 4692 mean_circ: 0.942372
Ran for 199050 frames Cell Events: 4707 mean_circ: 0.942401
Ran for 199550 frames Cell Events: 4718 mean_circ: 0.942389
Ran for 200050 frames Cell Events: 4736 mean_circ: 0.942376
Ran for 201050 frames Cell Events: 4754 mean_circ: 0.942429
Ran for 201550 frames Cell Events: 4764 mean_circ: 0.94246
Ran for 202550 frames Cell Events: 4782 mean_circ: 0.942416
Ran for 203050 frames Cell Events: 4790 mean_circ: 0.942435
Ran for 203550 frames Cell Events: 4802 mean_circ: 0.942417
Ran for 204050 frames Cell Events: 4815 mean_circ: 0.942364
Ran for 204550 frames Cell Events: 4826 mean_circ: 0.942358
Ran for 205050 frames Cell Events: 4836 mean_circ: 0.942347
Ran for 205550 frames Cell Events: 4845 mean_circ: 0.942324
Ran for 206550 frames Cell Events: 4875 mean_circ: 0.942293
Ran for 208050 frames Cell Events: 4912 mean_circ: 0.942292
Ran for 209050 frames Cell Events: 4946 mean_circ: 0.942189
Ran for 210050 frames Cell Events: 4973 mean_circ: 0.942196
Ran for 210550 frames Cell Events: 4984 mean_circ: 0.94221
Ran for 211050 frames Cell Events: 5004 mean_circ: 0.942227
Ran for 211550 frames Cell Events: 5018 mean_circ: 0.942139
Ran for 212050 frames Cell Events: 5024 mean_circ: 0.942139
Ran for 212550 frames Cell Events: 5035 mean_circ: 0.942168
Ran for 213050 frames Cell Events: 5045 mean_circ: 0.942165
Ran for 213550 frames Cell Events: 5057 mean_circ: 0.942174
Ran for 214050 frames Cell Events: 5068 mean_circ: 0.942176
Ran for 214550 frames Cell Events: 5081 mean_circ: 0.942157
Ran for 215050 frames Cell Events: 5098 mean_circ: 0.942189
Ran for 215550 frames Cell Events: 5105 mean_circ: 0.942199
Ran for 216050 frames Cell Events: 5120 mean_circ: 0.94221
Ran for 217550 frames Cell Events: 5163 mean_circ: 0.942112
Ran for 218550 frames Cell Events: 5185 mean_circ: 0.942094
Ran for 219550 frames Cell Events: 5210 mean_circ: 0.942056
Ran for 220050 frames Cell Events: 5227 mean_circ: 0.942069
Ran for 220550 frames Cell Events: 5236 mean_circ: 0.94211
Ran for 221050 frames Cell Events: 5246 mean_circ: 0.942122
Ran for 221550 frames Cell Events: 5253 mean_circ: 0.942107
Ran for 222550 frames Cell Events: 5286 mean_circ: 0.942142
Ran for 223550 frames Cell Events: 5309 mean_circ: 0.942123
Ran for 224050 frames Cell Events: 5329 mean_circ: 0.942151
Ran for 224550 frames Cell Events: 5350 mean_circ: 0.942166
Ran for 225050 frames Cell Events: 5362 mean_circ: 0.942152
Ran for 225550 frames Cell Events: 5375 mean_circ: 0.9422
Ran for 226050 frames Cell Events: 5380 mean_circ: 0.942208
Ran for 226550 frames Cell Events: 5390 mean_circ: 0.942211
Ran for 227050 frames Cell Events: 5396 mean_circ: 0.942213
Ran for 228050 frames Cell Events: 5428 mean_circ: 0.942219
Ran for 228550 frames Cell Events: 5445 mean_circ: 0.942199
Ran for 229050 frames Cell Events: 5460 mean_circ: 0.942252
Ran for 229550 frames Cell Events: 5473 mean_circ: 0.942236
Ran for 230050 frames Cell Events: 5487 mean_circ: 0.942205
Ran for 230550 frames Cell Events: 5496 mean_circ: 0.942151
Ran for 231050 frames Cell Events: 5510 mean_circ: 0.94218
Ran for 231550 frames Cell Events: 5521 mean_circ: 0.942159
Ran for 232050 frames Cell Events: 5530 mean_circ: 0.942146
Ran for 232550 frames Cell Events: 5542 mean_circ: 0.942164
Ran for 233550 frames Cell Events: 5569 mean_circ: 0.942175
Ran for 234550 frames Cell Events: 5596 mean_circ: 0.942146
Ran for 235050 frames Cell Events: 5610 mean_circ: 0.942143
Ran for 235550 frames Cell Events: 5625 mean_circ: 0.94214
Ran for 236050 frames Cell Events: 5635 mean_circ: 0.942137
Ran for 237550 frames Cell Events: 5686 mean_circ: 0.942136
Ran for 238050 frames Cell Events: 5702 mean_circ: 0.942142
Ran for 238550 frames Cell Events: 5711 mean_circ: 0.942095
Ran for 239050 frames Cell Events: 5725 mean_circ: 0.942078
Ran for 239550 frames Cell Events: 5734 mean_circ: 0.942086
Ran for 240050 frames Cell Events: 5747 mean_circ: 0.942125
Ran for 240550 frames Cell Events: 5759 mean_circ: 0.942118
Ran for 241050 frames Cell Events: 5762 mean_circ: 0.942121
Ran for 242050 frames Cell Events: 5795 mean_circ: 0.942099
Ran for 242550 frames Cell Events: 5803 mean_circ: 0.942095
Ran for 244050 frames Cell Events: 5855 mean_circ: 0.9421
Ran for 244550 frames Cell Events: 5871 mean_circ: 0.942124
Ran for 245050 frames Cell Events: 5885 mean_circ: 0.942125
Ran for 246050 frames Cell Events: 5917 mean_circ: 0.942156
Ran for 246550 frames Cell Events: 5922 mean_circ: 0.942158
Ran for 247550 frames Cell Events: 5943 mean_circ: 0.942173
Ran for 248050 frames Cell Events: 5953 mean_circ: 0.942172
Ran for 249050 frames Cell Events: 5977 mean_circ: 0.942097
Ran for 249550 frames Cell Events: 5988 mean_circ: 0.942054
Ran for 250050 frames Cell Events: 6004 mean_circ: 0.942058
Ran for 250550 frames Cell Events: 6012 mean_circ: 0.942055
Ran for 251050 frames Cell Events: 6024 mean_circ: 0.942056
Ran for 251550 frames Cell Events: 6045 mean_circ: 0.94201
Ran for 252050 frames Cell Events: 6060 mean_circ: 0.942046
Ran for 253550 frames Cell Events: 6104 mean_circ: 0.942029
Ran for 254050 frames Cell Events: 6112 mean_circ: 0.942006
Ran for 254550 frames Cell Events: 6117 mean_circ: 0.941993
Ran for 257050 frames Cell Events: 6190 mean_circ: 0.941985
Ran for 257550 frames Cell Events: 6201 mean_circ: 0.941994
Ran for 258050 frames Cell Events: 6215 mean_circ: 0.941974
Ran for 258550 frames Cell Events: 6228 mean_circ: 0.941962
Ran for 259550 frames Cell Events: 6261 mean_circ: 0.941938
Ran for 260050 frames Cell Events: 6270 mean_circ: 0.941931
Ran for 261050 frames Cell Events: 6300 mean_circ: 0.941882
Ran for 261550 frames Cell Events: 6309 mean_circ: 0.941853
Ran for 262050 frames Cell Events: 6325 mean_circ: 0.941886
Ran for 262550 frames Cell Events: 6346 mean_circ: 0.94191
Ran for 263050 frames Cell Events: 6359 mean_circ: 0.941937
Ran for 263550 frames Cell Events: 6377 mean_circ: 0.941906
Ran for 264550 frames Cell Events: 6399 mean_circ: 0.941921
Ran for 265050 frames Cell Events: 6411 mean_circ: 0.941953
Ran for 265550 frames Cell Events: 6426 mean_circ: 0.941962
Ran for 266050 frames Cell Events: 6440 mean_circ: 0.941939
Ran for 266550 frames Cell Events: 6449 mean_circ: 0.941941
Ran for 267050 frames Cell Events: 6466 mean_circ: 0.941961
Ran for 267550 frames Cell Events: 6481 mean_circ: 0.941953
Ran for 268050 frames Cell Events: 6489 mean_circ: 0.941951
Ran for 268550 frames Cell Events: 6506 mean_circ: 0.941959
Ran for 269550 frames Cell Events: 6528 mean_circ: 0.941994
Ran for 270550 frames Cell Events: 6567 mean_circ: 0.942059
Ran for 271050 frames Cell Events: 6576 mean_circ: 0.942092
Ran for 271550 frames Cell Events: 6589 mean_circ: 0.942062
Ran for 272050 frames Cell Events: 6606 mean_circ: 0.942053
Ran for 274050 frames Cell Events: 6659 mean_circ: 0.942099
Ran for 275050 frames Cell Events: 6677 mean_circ: 0.942105
Ran for 275550 frames Cell Events: 6694 mean_circ: 0.942128
Ran for 276050 frames Cell Events: 6710 mean_circ: 0.942133
Ran for 276550 frames Cell Events: 6719 mean_circ: 0.942155
Ran for 277050 frames Cell Events: 6732 mean_circ: 0.942152
Ran for 277550 frames Cell Events: 6750 mean_circ: 0.942141
Ran for 278050 frames Cell Events: 6764 mean_circ: 0.942136
Ran for 278550 frames Cell Events: 6778 mean_circ: 0.942141
Ran for 279050 frames Cell Events: 6794 mean_circ: 0.942167
Ran for 279550 frames Cell Events: 6809 mean_circ: 0.94212
Ran for 280550 frames Cell Events: 6834 mean_circ: 0.94212
Ran for 281050 frames Cell Events: 6848 mean_circ: 0.942092
Ran for 281550 frames Cell Events: 6857 mean_circ: 0.942099
Ran for 282050 frames Cell Events: 6865 mean_circ: 0.942105
Ran for 282550 frames Cell Events: 6872 mean_circ: 0.942095
Ran for 283550 frames Cell Events: 6905 mean_circ: 0.942109
Ran for 284050 frames Cell Events: 6920 mean_circ: 0.942102
Ran for 284550 frames Cell Events: 6936 mean_circ: 0.942061
Ran for 285050 frames Cell Events: 6948 mean_circ: 0.942052
Ran for 285550 frames Cell Events: 6961 mean_circ: 0.942032
Ran for 286550 frames Cell Events: 6989 mean_circ: 0.942006
Ran for 287050 frames Cell Events: 6999 mean_circ: 0.942018
Ran for 287550 frames Cell Events: 7014 mean_circ: 0.942014
Ran for 289050 frames Cell Events: 7073 mean_circ: 0.941948
Ran for 290050 frames Cell Events: 7097 mean_circ: 0.941986
Ran for 290550 frames Cell Events: 7119 mean_circ: 0.941978
Ran for 291050 frames Cell Events: 7134 mean_circ: 0.941997
Ran for 291550 frames Cell Events: 7143 mean_circ: 0.941956
Ran for 292050 frames Cell Events: 7161 mean_circ: 0.941982
Ran for 292550 frames Cell Events: 7180 mean_circ: 0.941993
Ran for 293050 frames Cell Events: 7197 mean_circ: 0.941981
Ran for 294050 frames Cell Events: 7220 mean_circ: 0.941949
Ran for 294550 frames Cell Events: 7239 mean_circ: 0.941991
Ran for 296050 frames Cell Events: 7281 mean_circ: 0.94199
Ran for 297050 frames Cell Events: 7300 mean_circ: 0.941991
Ran for 297550 frames Cell Events: 7314 mean_circ: 0.941963
Ran for 298550 frames Cell Events: 7345 mean_circ: 0.941989
Ran for 299050 frames Cell Events: 7359 mean_circ: 0.941977
Ran for 300050 frames Cell Events: 7382 mean_circ: 0.941973
Ran for 301050 frames Cell Events: 7404 mean_circ: 0.941976
Ran for 302550 frames Cell Events: 7453 mean_circ: 0.942007
Ran for 303050 frames Cell Events: 7462 mean_circ: 0.942024
Ran for 304050 frames Cell Events: 7493 mean_circ: 0.94202
Ran for 305050 frames Cell Events: 7517 mean_circ: 0.942031
Ran for 305550 frames Cell Events: 7532 mean_circ: 0.941996
Ran for 306050 frames Cell Events: 7539 mean_circ: 0.941999
Ran for 306550 frames Cell Events: 7554 mean_circ: 0.941985
Ran for 307550 frames Cell Events: 7582 mean_circ: 0.941942
Ran for 308550 frames Cell Events: 7607 mean_circ: 0.94194
Ran for 309050 frames Cell Events: 7631 mean_circ: 0.941954
Ran for 309550 frames Cell Events: 7666 mean_circ: 0.941954
Ran for 310550 frames Cell Events: 7696 mean_circ: 0.941912
Ran for 311050 frames Cell Events: 7702 mean_circ: 0.941907
Ran for 312050 frames Cell Events: 7719 mean_circ: 0.941906
Ran for 313050 frames Cell Events: 7745 mean_circ: 0.941874
Ran for 313550 frames Cell Events: 7754 mean_circ: 0.941873
Ran for 314050 frames Cell Events: 7760 mean_circ: 0.94187
Ran for 316550 frames Cell Events: 7826 mean_circ: 0.941841
Ran for 317550 frames Cell Events: 7862 mean_circ: 0.941828
Ran for 318050 frames Cell Events: 7874 mean_circ: 0.941834
Ran for 319050 frames Cell Events: 7894 mean_circ: 0.941828
Ran for 319550 frames Cell Events: 7907 mean_circ: 0.941802
Ran for 320050 frames Cell Events: 7918 mean_circ: 0.941814
Ran for 320550 frames Cell Events: 7931 mean_circ: 0.941792
Ran for 321050 frames Cell Events: 7946 mean_circ: 0.941806
Ran for 321550 frames Cell Events: 7956 mean_circ: 0.941808
Ran for 322050 frames Cell Events: 7969 mean_circ: 0.941792
Ran for 323050 frames Cell Events: 8002 mean_circ: 0.941769
Ran for 324050 frames Cell Events: 8025 mean_circ: 0.941761
Ran for 324550 frames Cell Events: 8044 mean_circ: 0.941738
Ran for 325050 frames Cell Events: 8061 mean_circ: 0.941729
Ran for 325550 frames Cell Events: 8072 mean_circ: 0.941746
Ran for 326550 frames Cell Events: 8108 mean_circ: 0.941796
Ran for 327550 frames Cell Events: 8131 mean_circ: 0.941797
End this measurment..
Stopping time: 2.09526e+009
****************************************
Measurement finished
Mean Circularitiy: 0.941676
Mean Area: 619.294
Mean FL-1 intensity: 4290.45
Mean FL-2 intensity: 5267.03
Mean FL-3 intensity: 0
frames processed: 327277
Total Time: 163954ms
Number of Runs (new bg img) 0
Frames collected: 327798
Skipped frames: 22617
Rescued Frames: 1381401
Samples DAQ: 81949845
Samples written: 163898794
Samples per Channel: 81949397
FPS: 1999.33
Samples per second: 499831
Expected samples/s: 500000
Events: 8137
Events per second: 49.6297
jumped back (PMT): 4782
#Frames read, frequency
# 0 frames :446788
# 1 frames :188118
# 2 frames :5857
# 3 frames :2266
# 4 frames :1261
# 5 frames :754
# 6 frames :1108
# 7 frames :2382
# 8 frames :1163
# 9 frames :1146
# 10 frames :1215
# 11 frames :550
# 12 frames :458
# 13 frames :343
# 14 frames :222
# 15 frames :202
# 16 frames :160
# 17 frames :235
# 18 frames :363
# 19 frames :299
# 20 frames :190
# 21 frames :163
# 22 frames :102
# 23 frames :39
# 24 frames :37
# 25 frames :26
# 26 frames :20
# 27 frames :24
# 28 frames :18
# 29 frames :15
# 30 frames :3
# 31 frames :10
# 32 frames :7
# 33 frames :6
# 34 frames :8
# 35 frames :5
# 36 frames :3
# 37 frames :1
# 38 frames :4
# 39 frames :1
# 40 frames :1
# 41 frames :1
# 43 frames :2
# 49 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6662
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0