Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_14.55.49
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "39cbaead1c654213889d66fd981510cf",
"name": "M1_20170609_1239_dsRNA_X3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "12:56:10"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8035 (max 8036) in '8035'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.0078
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.17536e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 10 mean_circ: 0.955547
Ran for 1050 frames Cell Events: 23 mean_circ: 0.956072
Ran for 1550 frames Cell Events: 38 mean_circ: 0.951697
Ran for 2050 frames Cell Events: 45 mean_circ: 0.952036
Ran for 2550 frames Cell Events: 58 mean_circ: 0.952003
Ran for 4050 frames Cell Events: 100 mean_circ: 0.952061
Ran for 4550 frames Cell Events: 114 mean_circ: 0.95203
Ran for 5050 frames Cell Events: 124 mean_circ: 0.953165
Ran for 5550 frames Cell Events: 139 mean_circ: 0.953688
Ran for 6050 frames Cell Events: 149 mean_circ: 0.954966
Ran for 6550 frames Cell Events: 160 mean_circ: 0.954175
Ran for 8550 frames Cell Events: 213 mean_circ: 0.951738
Ran for 9550 frames Cell Events: 233 mean_circ: 0.951848
Ran for 10550 frames Cell Events: 260 mean_circ: 0.950841
Ran for 11050 frames Cell Events: 272 mean_circ: 0.951227
Ran for 11550 frames Cell Events: 290 mean_circ: 0.950846
Ran for 12050 frames Cell Events: 316 mean_circ: 0.950693
Ran for 12550 frames Cell Events: 336 mean_circ: 0.950062
Ran for 13050 frames Cell Events: 351 mean_circ: 0.950306
Ran for 13550 frames Cell Events: 365 mean_circ: 0.950423
Ran for 14050 frames Cell Events: 373 mean_circ: 0.950469
Ran for 15050 frames Cell Events: 402 mean_circ: 0.950485
Ran for 15550 frames Cell Events: 414 mean_circ: 0.949782
Ran for 16050 frames Cell Events: 429 mean_circ: 0.949861
Ran for 16550 frames Cell Events: 445 mean_circ: 0.94996
Ran for 17550 frames Cell Events: 473 mean_circ: 0.950009
Ran for 18050 frames Cell Events: 493 mean_circ: 0.949496
Ran for 18550 frames Cell Events: 511 mean_circ: 0.949226
Ran for 19550 frames Cell Events: 540 mean_circ: 0.949624
Ran for 20050 frames Cell Events: 557 mean_circ: 0.949516
Ran for 21050 frames Cell Events: 579 mean_circ: 0.949233
Ran for 21550 frames Cell Events: 594 mean_circ: 0.949548
Ran for 22050 frames Cell Events: 611 mean_circ: 0.949329
Ran for 22550 frames Cell Events: 625 mean_circ: 0.949563
Ran for 23550 frames Cell Events: 651 mean_circ: 0.949232
Ran for 24550 frames Cell Events: 672 mean_circ: 0.949128
Ran for 25050 frames Cell Events: 685 mean_circ: 0.948995
Ran for 26050 frames Cell Events: 713 mean_circ: 0.948549
Ran for 26550 frames Cell Events: 724 mean_circ: 0.948289
Ran for 27050 frames Cell Events: 740 mean_circ: 0.948403
Ran for 27550 frames Cell Events: 758 mean_circ: 0.948611
Ran for 28550 frames Cell Events: 785 mean_circ: 0.94876
Ran for 29050 frames Cell Events: 800 mean_circ: 0.948866
Ran for 31050 frames Cell Events: 870 mean_circ: 0.948867
Ran for 31550 frames Cell Events: 888 mean_circ: 0.948649
Ran for 34550 frames Cell Events: 974 mean_circ: 0.949209
Ran for 35550 frames Cell Events: 1000 mean_circ: 0.949276
Ran for 36050 frames Cell Events: 1010 mean_circ: 0.949496
Ran for 36550 frames Cell Events: 1027 mean_circ: 0.949482
Ran for 37050 frames Cell Events: 1042 mean_circ: 0.9495
Ran for 38550 frames Cell Events: 1102 mean_circ: 0.949171
Ran for 39050 frames Cell Events: 1108 mean_circ: 0.949133
Ran for 40550 frames Cell Events: 1142 mean_circ: 0.949129
Ran for 41050 frames Cell Events: 1166 mean_circ: 0.948994
Ran for 42050 frames Cell Events: 1197 mean_circ: 0.948952
Ran for 43550 frames Cell Events: 1243 mean_circ: 0.949176
Ran for 44050 frames Cell Events: 1253 mean_circ: 0.949249
Ran for 45050 frames Cell Events: 1282 mean_circ: 0.949244
Ran for 46050 frames Cell Events: 1317 mean_circ: 0.949423
Ran for 47050 frames Cell Events: 1344 mean_circ: 0.949511
Ran for 48550 frames Cell Events: 1371 mean_circ: 0.949461
Ran for 49050 frames Cell Events: 1378 mean_circ: 0.94945
Ran for 49550 frames Cell Events: 1394 mean_circ: 0.949581
Ran for 50050 frames Cell Events: 1407 mean_circ: 0.949615
Ran for 51550 frames Cell Events: 1447 mean_circ: 0.949636
Ran for 52050 frames Cell Events: 1463 mean_circ: 0.949646
Ran for 52550 frames Cell Events: 1474 mean_circ: 0.949621
Ran for 53550 frames Cell Events: 1508 mean_circ: 0.949581
Ran for 54050 frames Cell Events: 1518 mean_circ: 0.949478
Ran for 55050 frames Cell Events: 1557 mean_circ: 0.949548
Ran for 55550 frames Cell Events: 1574 mean_circ: 0.949536
Ran for 56050 frames Cell Events: 1583 mean_circ: 0.94961
Ran for 56550 frames Cell Events: 1601 mean_circ: 0.949657
Ran for 58050 frames Cell Events: 1638 mean_circ: 0.949345
Ran for 59050 frames Cell Events: 1687 mean_circ: 0.949453
Ran for 60550 frames Cell Events: 1732 mean_circ: 0.949393
Ran for 61050 frames Cell Events: 1748 mean_circ: 0.949427
Ran for 62050 frames Cell Events: 1776 mean_circ: 0.949629
Ran for 63050 frames Cell Events: 1801 mean_circ: 0.949642
Ran for 64550 frames Cell Events: 1843 mean_circ: 0.949923
Ran for 65550 frames Cell Events: 1873 mean_circ: 0.94984
Ran for 67050 frames Cell Events: 1920 mean_circ: 0.949856
Ran for 67550 frames Cell Events: 1929 mean_circ: 0.949877
Ran for 68050 frames Cell Events: 1938 mean_circ: 0.949848
Ran for 68550 frames Cell Events: 1944 mean_circ: 0.949879
Ran for 69550 frames Cell Events: 1983 mean_circ: 0.949984
Ran for 70050 frames Cell Events: 2006 mean_circ: 0.949835
Ran for 70550 frames Cell Events: 2018 mean_circ: 0.949902
Ran for 71550 frames Cell Events: 2050 mean_circ: 0.949928
Ran for 72050 frames Cell Events: 2065 mean_circ: 0.949992
Ran for 72550 frames Cell Events: 2077 mean_circ: 0.949879
Ran for 73050 frames Cell Events: 2088 mean_circ: 0.949835
Ran for 73550 frames Cell Events: 2107 mean_circ: 0.949866
Ran for 74050 frames Cell Events: 2124 mean_circ: 0.949902
Ran for 74550 frames Cell Events: 2133 mean_circ: 0.949935
Ran for 76050 frames Cell Events: 2186 mean_circ: 0.949654
Ran for 76550 frames Cell Events: 2208 mean_circ: 0.949619
Ran for 77050 frames Cell Events: 2220 mean_circ: 0.94967
Ran for 78050 frames Cell Events: 2253 mean_circ: 0.949661
Ran for 78550 frames Cell Events: 2267 mean_circ: 0.949591
Ran for 79050 frames Cell Events: 2278 mean_circ: 0.949671
Ran for 80050 frames Cell Events: 2315 mean_circ: 0.949774
Ran for 80550 frames Cell Events: 2338 mean_circ: 0.949781
Ran for 81050 frames Cell Events: 2351 mean_circ: 0.949787
Ran for 81550 frames Cell Events: 2371 mean_circ: 0.949821
Ran for 82550 frames Cell Events: 2395 mean_circ: 0.94983
Ran for 83050 frames Cell Events: 2414 mean_circ: 0.949841
Ran for 83550 frames Cell Events: 2426 mean_circ: 0.949926
Ran for 84550 frames Cell Events: 2450 mean_circ: 0.950048
Ran for 85050 frames Cell Events: 2464 mean_circ: 0.950096
Ran for 85550 frames Cell Events: 2478 mean_circ: 0.950085
Ran for 87050 frames Cell Events: 2510 mean_circ: 0.950088
Ran for 87550 frames Cell Events: 2525 mean_circ: 0.950078
Ran for 88050 frames Cell Events: 2533 mean_circ: 0.950084
Ran for 88550 frames Cell Events: 2550 mean_circ: 0.95008
Ran for 89050 frames Cell Events: 2572 mean_circ: 0.950085
Ran for 89550 frames Cell Events: 2586 mean_circ: 0.94999
Ran for 90050 frames Cell Events: 2604 mean_circ: 0.950029
Ran for 91050 frames Cell Events: 2636 mean_circ: 0.950083
Ran for 91550 frames Cell Events: 2653 mean_circ: 0.95012
Ran for 92050 frames Cell Events: 2677 mean_circ: 0.95023
Ran for 92550 frames Cell Events: 2684 mean_circ: 0.950268
Ran for 93050 frames Cell Events: 2692 mean_circ: 0.950255
Ran for 94050 frames Cell Events: 2725 mean_circ: 0.950314
Ran for 94550 frames Cell Events: 2735 mean_circ: 0.950286
Ran for 95050 frames Cell Events: 2749 mean_circ: 0.95029
Ran for 95550 frames Cell Events: 2770 mean_circ: 0.950323
Ran for 96050 frames Cell Events: 2788 mean_circ: 0.950263
Ran for 96550 frames Cell Events: 2810 mean_circ: 0.950181
Ran for 97050 frames Cell Events: 2815 mean_circ: 0.950157
Ran for 97550 frames Cell Events: 2830 mean_circ: 0.950162
Ran for 98050 frames Cell Events: 2841 mean_circ: 0.950195
Ran for 99050 frames Cell Events: 2870 mean_circ: 0.95028
Ran for 99550 frames Cell Events: 2885 mean_circ: 0.950289
Ran for 100050 frames Cell Events: 2899 mean_circ: 0.950324
Ran for 100550 frames Cell Events: 2911 mean_circ: 0.950302
Ran for 101050 frames Cell Events: 2927 mean_circ: 0.950214
Ran for 102550 frames Cell Events: 2982 mean_circ: 0.95014
Ran for 104050 frames Cell Events: 3020 mean_circ: 0.950054
Ran for 105050 frames Cell Events: 3049 mean_circ: 0.950016
Ran for 105550 frames Cell Events: 3062 mean_circ: 0.949926
Ran for 107050 frames Cell Events: 3117 mean_circ: 0.949867
Ran for 107550 frames Cell Events: 3131 mean_circ: 0.949868
Ran for 108050 frames Cell Events: 3139 mean_circ: 0.949784
Ran for 108550 frames Cell Events: 3149 mean_circ: 0.949769
Ran for 109050 frames Cell Events: 3161 mean_circ: 0.949771
Ran for 111050 frames Cell Events: 3219 mean_circ: 0.949686
Ran for 111550 frames Cell Events: 3239 mean_circ: 0.949681
Ran for 112050 frames Cell Events: 3255 mean_circ: 0.949697
Ran for 112550 frames Cell Events: 3269 mean_circ: 0.949742
Ran for 113550 frames Cell Events: 3309 mean_circ: 0.949767
Ran for 114050 frames Cell Events: 3328 mean_circ: 0.949816
Ran for 116550 frames Cell Events: 3394 mean_circ: 0.949799
Ran for 119050 frames Cell Events: 3476 mean_circ: 0.949813
Ran for 119550 frames Cell Events: 3490 mean_circ: 0.949867
Ran for 120050 frames Cell Events: 3497 mean_circ: 0.949876
Ran for 120550 frames Cell Events: 3509 mean_circ: 0.949886
Ran for 123550 frames Cell Events: 3633 mean_circ: 0.949986
Ran for 124050 frames Cell Events: 3643 mean_circ: 0.949982
Ran for 124550 frames Cell Events: 3658 mean_circ: 0.949968
Ran for 125050 frames Cell Events: 3676 mean_circ: 0.949954
Ran for 125550 frames Cell Events: 3695 mean_circ: 0.949998
Ran for 126050 frames Cell Events: 3708 mean_circ: 0.949939
Ran for 126550 frames Cell Events: 3725 mean_circ: 0.94999
Ran for 127050 frames Cell Events: 3740 mean_circ: 0.950022
Ran for 127550 frames Cell Events: 3750 mean_circ: 0.950027
Ran for 128050 frames Cell Events: 3762 mean_circ: 0.950072
Ran for 128550 frames Cell Events: 3772 mean_circ: 0.950035
Ran for 130050 frames Cell Events: 3814 mean_circ: 0.950014
Ran for 131550 frames Cell Events: 3862 mean_circ: 0.950058
Ran for 132550 frames Cell Events: 3891 mean_circ: 0.950078
Ran for 134050 frames Cell Events: 3937 mean_circ: 0.950036
Ran for 134550 frames Cell Events: 3946 mean_circ: 0.950024
Ran for 135050 frames Cell Events: 3963 mean_circ: 0.949915
Ran for 135550 frames Cell Events: 3983 mean_circ: 0.94992
Ran for 137550 frames Cell Events: 4060 mean_circ: 0.94997
Ran for 138550 frames Cell Events: 4090 mean_circ: 0.95001
Ran for 139550 frames Cell Events: 4118 mean_circ: 0.950048
Ran for 140050 frames Cell Events: 4130 mean_circ: 0.950067
Ran for 140550 frames Cell Events: 4150 mean_circ: 0.950143
Ran for 141050 frames Cell Events: 4172 mean_circ: 0.950148
Ran for 141550 frames Cell Events: 4194 mean_circ: 0.950117
Ran for 142050 frames Cell Events: 4211 mean_circ: 0.950123
Ran for 144050 frames Cell Events: 4286 mean_circ: 0.950183
Ran for 145550 frames Cell Events: 4331 mean_circ: 0.950173
Ran for 146550 frames Cell Events: 4364 mean_circ: 0.95015
Ran for 148550 frames Cell Events: 4423 mean_circ: 0.95003
Ran for 149050 frames Cell Events: 4428 mean_circ: 0.950012
Ran for 151550 frames Cell Events: 4499 mean_circ: 0.950017
Ran for 152550 frames Cell Events: 4538 mean_circ: 0.950009
Ran for 154050 frames Cell Events: 4583 mean_circ: 0.949939
Ran for 154550 frames Cell Events: 4592 mean_circ: 0.949982
Ran for 155050 frames Cell Events: 4604 mean_circ: 0.949951
Ran for 156050 frames Cell Events: 4632 mean_circ: 0.949978
Ran for 156550 frames Cell Events: 4643 mean_circ: 0.94995
Ran for 157550 frames Cell Events: 4667 mean_circ: 0.949966
Ran for 158550 frames Cell Events: 4700 mean_circ: 0.949908
Ran for 159050 frames Cell Events: 4714 mean_circ: 0.94993
Ran for 160050 frames Cell Events: 4745 mean_circ: 0.949862
Ran for 160550 frames Cell Events: 4769 mean_circ: 0.949842
Ran for 161050 frames Cell Events: 4783 mean_circ: 0.949832
Ran for 163050 frames Cell Events: 4854 mean_circ: 0.949705
Ran for 163550 frames Cell Events: 4871 mean_circ: 0.949684
Ran for 164050 frames Cell Events: 4885 mean_circ: 0.949712
Ran for 164550 frames Cell Events: 4903 mean_circ: 0.949681
Ran for 165050 frames Cell Events: 4918 mean_circ: 0.949708
Ran for 165550 frames Cell Events: 4929 mean_circ: 0.94964
Ran for 166050 frames Cell Events: 4942 mean_circ: 0.949613
Ran for 166550 frames Cell Events: 4953 mean_circ: 0.949586
Ran for 168050 frames Cell Events: 4996 mean_circ: 0.949637
Ran for 168550 frames Cell Events: 5011 mean_circ: 0.949589
Ran for 169550 frames Cell Events: 5038 mean_circ: 0.949601
Ran for 170050 frames Cell Events: 5060 mean_circ: 0.949628
Ran for 170550 frames Cell Events: 5070 mean_circ: 0.949662
Ran for 171050 frames Cell Events: 5078 mean_circ: 0.949673
Ran for 172050 frames Cell Events: 5099 mean_circ: 0.94966
Ran for 172550 frames Cell Events: 5111 mean_circ: 0.949674
Ran for 173050 frames Cell Events: 5127 mean_circ: 0.949682
Ran for 173550 frames Cell Events: 5138 mean_circ: 0.949692
Ran for 174550 frames Cell Events: 5172 mean_circ: 0.949691
Ran for 175050 frames Cell Events: 5189 mean_circ: 0.949691
Ran for 175550 frames Cell Events: 5202 mean_circ: 0.949596
Ran for 176550 frames Cell Events: 5226 mean_circ: 0.949636
Ran for 177550 frames Cell Events: 5251 mean_circ: 0.949667
Ran for 178050 frames Cell Events: 5256 mean_circ: 0.949621
Ran for 178550 frames Cell Events: 5275 mean_circ: 0.949634
Ran for 179050 frames Cell Events: 5285 mean_circ: 0.949632
Ran for 180050 frames Cell Events: 5324 mean_circ: 0.949599
Ran for 180550 frames Cell Events: 5344 mean_circ: 0.949586
Ran for 181550 frames Cell Events: 5373 mean_circ: 0.949538
Ran for 182050 frames Cell Events: 5384 mean_circ: 0.94952
Ran for 182550 frames Cell Events: 5398 mean_circ: 0.949494
Ran for 183050 frames Cell Events: 5410 mean_circ: 0.949489
Ran for 183550 frames Cell Events: 5428 mean_circ: 0.949515
Ran for 184550 frames Cell Events: 5458 mean_circ: 0.949519
Ran for 185050 frames Cell Events: 5473 mean_circ: 0.949544
Ran for 185550 frames Cell Events: 5493 mean_circ: 0.949577
Ran for 187050 frames Cell Events: 5527 mean_circ: 0.949557
Ran for 188050 frames Cell Events: 5561 mean_circ: 0.949499
Ran for 188550 frames Cell Events: 5577 mean_circ: 0.949434
Ran for 191050 frames Cell Events: 5675 mean_circ: 0.949499
Ran for 191550 frames Cell Events: 5691 mean_circ: 0.949463
Ran for 192550 frames Cell Events: 5720 mean_circ: 0.94947
Ran for 193050 frames Cell Events: 5729 mean_circ: 0.949477
Ran for 194550 frames Cell Events: 5773 mean_circ: 0.949435
Ran for 195050 frames Cell Events: 5794 mean_circ: 0.94936
Ran for 195550 frames Cell Events: 5810 mean_circ: 0.949338
Ran for 196050 frames Cell Events: 5825 mean_circ: 0.949353
Ran for 197550 frames Cell Events: 5874 mean_circ: 0.949327
Ran for 198550 frames Cell Events: 5905 mean_circ: 0.949369
Ran for 200550 frames Cell Events: 5974 mean_circ: 0.949357
Ran for 201550 frames Cell Events: 6008 mean_circ: 0.949309
Ran for 202050 frames Cell Events: 6025 mean_circ: 0.949324
Ran for 202550 frames Cell Events: 6038 mean_circ: 0.949336
Ran for 203050 frames Cell Events: 6055 mean_circ: 0.94934
Ran for 204050 frames Cell Events: 6084 mean_circ: 0.949378
Ran for 204550 frames Cell Events: 6099 mean_circ: 0.949402
Ran for 206550 frames Cell Events: 6163 mean_circ: 0.949413
Ran for 207050 frames Cell Events: 6179 mean_circ: 0.949434
Ran for 207550 frames Cell Events: 6190 mean_circ: 0.949449
Ran for 208550 frames Cell Events: 6212 mean_circ: 0.949444
Ran for 209550 frames Cell Events: 6242 mean_circ: 0.949443
Ran for 210550 frames Cell Events: 6273 mean_circ: 0.949447
Ran for 212050 frames Cell Events: 6323 mean_circ: 0.949403
Ran for 212550 frames Cell Events: 6336 mean_circ: 0.949408
Ran for 213550 frames Cell Events: 6370 mean_circ: 0.9494
Ran for 214550 frames Cell Events: 6394 mean_circ: 0.949349
Ran for 215050 frames Cell Events: 6410 mean_circ: 0.949361
Ran for 215550 frames Cell Events: 6428 mean_circ: 0.949369
Ran for 216050 frames Cell Events: 6445 mean_circ: 0.949386
Ran for 216550 frames Cell Events: 6458 mean_circ: 0.949392
Ran for 217050 frames Cell Events: 6479 mean_circ: 0.949376
Ran for 217550 frames Cell Events: 6495 mean_circ: 0.949341
Ran for 218050 frames Cell Events: 6513 mean_circ: 0.949322
Ran for 219050 frames Cell Events: 6557 mean_circ: 0.949263
Ran for 220050 frames Cell Events: 6587 mean_circ: 0.949239
Ran for 220550 frames Cell Events: 6602 mean_circ: 0.949191
Ran for 221550 frames Cell Events: 6630 mean_circ: 0.949193
Ran for 222050 frames Cell Events: 6649 mean_circ: 0.949163
Ran for 222550 frames Cell Events: 6664 mean_circ: 0.949152
Ran for 224050 frames Cell Events: 6713 mean_circ: 0.949155
Ran for 225050 frames Cell Events: 6741 mean_circ: 0.949186
Ran for 225550 frames Cell Events: 6764 mean_circ: 0.949151
Ran for 226050 frames Cell Events: 6781 mean_circ: 0.949191
Ran for 226550 frames Cell Events: 6799 mean_circ: 0.949201
Ran for 227550 frames Cell Events: 6837 mean_circ: 0.949189
Ran for 228050 frames Cell Events: 6861 mean_circ: 0.94917
Ran for 228550 frames Cell Events: 6881 mean_circ: 0.949164
Ran for 229050 frames Cell Events: 6901 mean_circ: 0.949208
Ran for 229550 frames Cell Events: 6917 mean_circ: 0.949222
Ran for 230050 frames Cell Events: 6933 mean_circ: 0.94926
Ran for 230550 frames Cell Events: 6950 mean_circ: 0.949255
Ran for 231050 frames Cell Events: 6962 mean_circ: 0.949214
Ran for 231550 frames Cell Events: 6972 mean_circ: 0.949204
Ran for 232050 frames Cell Events: 6983 mean_circ: 0.949219
Ran for 233050 frames Cell Events: 7011 mean_circ: 0.94922
Ran for 233550 frames Cell Events: 7028 mean_circ: 0.949251
Ran for 235050 frames Cell Events: 7081 mean_circ: 0.949287
Ran for 236050 frames Cell Events: 7115 mean_circ: 0.949277
Ran for 236550 frames Cell Events: 7127 mean_circ: 0.94928
Ran for 237550 frames Cell Events: 7169 mean_circ: 0.949311
Ran for 238050 frames Cell Events: 7193 mean_circ: 0.949321
Ran for 238550 frames Cell Events: 7207 mean_circ: 0.949316
Ran for 239050 frames Cell Events: 7231 mean_circ: 0.949325
Ran for 241050 frames Cell Events: 7281 mean_circ: 0.94936
Ran for 241550 frames Cell Events: 7301 mean_circ: 0.949345
Ran for 242050 frames Cell Events: 7316 mean_circ: 0.949305
Ran for 243050 frames Cell Events: 7335 mean_circ: 0.949303
Ran for 243550 frames Cell Events: 7354 mean_circ: 0.949274
Ran for 244550 frames Cell Events: 7398 mean_circ: 0.949296
Ran for 246050 frames Cell Events: 7450 mean_circ: 0.949231
Ran for 246550 frames Cell Events: 7463 mean_circ: 0.949238
Ran for 247050 frames Cell Events: 7477 mean_circ: 0.949245
Ran for 248050 frames Cell Events: 7517 mean_circ: 0.949274
Ran for 248550 frames Cell Events: 7530 mean_circ: 0.949283
Ran for 249050 frames Cell Events: 7547 mean_circ: 0.949258
Ran for 250050 frames Cell Events: 7583 mean_circ: 0.949228
Ran for 250550 frames Cell Events: 7612 mean_circ: 0.94923
Ran for 251050 frames Cell Events: 7630 mean_circ: 0.949208
Ran for 251550 frames Cell Events: 7644 mean_circ: 0.949237
Ran for 252050 frames Cell Events: 7652 mean_circ: 0.949234
Ran for 253050 frames Cell Events: 7681 mean_circ: 0.949232
Ran for 254050 frames Cell Events: 7711 mean_circ: 0.949206
Ran for 257050 frames Cell Events: 7821 mean_circ: 0.94927
Ran for 257550 frames Cell Events: 7834 mean_circ: 0.949258
Ran for 258050 frames Cell Events: 7847 mean_circ: 0.949268
Ran for 259050 frames Cell Events: 7883 mean_circ: 0.949312
Ran for 259550 frames Cell Events: 7904 mean_circ: 0.94931
Ran for 260050 frames Cell Events: 7921 mean_circ: 0.949324
Ran for 260550 frames Cell Events: 7938 mean_circ: 0.949357
Ran for 261550 frames Cell Events: 7978 mean_circ: 0.949346
Ran for 262050 frames Cell Events: 7991 mean_circ: 0.949328
Ran for 262550 frames Cell Events: 8009 mean_circ: 0.949328
Ran for 263050 frames Cell Events: 8020 mean_circ: 0.949354
End this measurment..
Stopping time: 2.17549e+009
****************************************
Measurement finished
Mean Circularitiy: 0.94935
Mean Area: 583.529
Mean FL-1 intensity: 3257.61
Mean FL-2 intensity: 3950.62
Mean FL-3 intensity: 0
frames processed: 262602
Total Time: 132008ms
Number of Runs (new bg img) 0
Frames collected: 263896
Skipped frames: 8396
Rescued Frames: 837399
Samples DAQ: 65974157
Samples written: 131948150
Samples per Channel: 65974075
FPS: 1999.1
Samples per second: 499775
Expected samples/s: 500000
Events: 8036
Events per second: 60.8753
jumped back (PMT): 4826
#Frames read, frequency
# 0 frames :381484
# 1 frames :127826
# 2 frames :4465
# 3 frames :2369
# 4 frames :1166
# 5 frames :758
# 6 frames :611
# 7 frames :1731
# 8 frames :1156
# 9 frames :931
# 10 frames :969
# 11 frames :880
# 12 frames :668
# 13 frames :517
# 14 frames :325
# 15 frames :221
# 16 frames :227
# 17 frames :221
# 18 frames :211
# 19 frames :187
# 20 frames :160
# 21 frames :127
# 22 frames :89
# 23 frames :65
# 24 frames :37
# 25 frames :41
# 26 frames :50
# 27 frames :42
# 28 frames :29
# 29 frames :27
# 30 frames :22
# 31 frames :21
# 32 frames :19
# 33 frames :7
# 34 frames :10
# 35 frames :14
# 36 frames :6
# 37 frames :7
# 38 frames :1
# 39 frames :11
# 40 frames :7
# 41 frames :4
# 42 frames :2
# 43 frames :3
# 44 frames :2
# 46 frames :3
# 47 frames :1
# 49 frames :1
# 51 frames :1
# 52 frames :3
# 53 frames :1
# 54 frames :1
# 57 frames :1
# 58 frames :2
# 59 frames :1
# 60 frames :1
# 62 frames :1
# 75 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.0078
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0