Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_15.01.16
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "162b25f638a87587957c0b46b584b690",
"name": "M1_20170609_1345_dsRNA_X8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:01:37"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8179 (max 8180) in '8179'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.1982
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.17935e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 8 mean_circ: 0.958609
Ran for 2050 frames Cell Events: 43 mean_circ: 0.952346
Ran for 4550 frames Cell Events: 121 mean_circ: 0.945351
Ran for 5050 frames Cell Events: 129 mean_circ: 0.945673
Ran for 5550 frames Cell Events: 135 mean_circ: 0.946073
Ran for 6050 frames Cell Events: 150 mean_circ: 0.946382
Ran for 6550 frames Cell Events: 164 mean_circ: 0.945575
Ran for 7050 frames Cell Events: 181 mean_circ: 0.945471
Ran for 7550 frames Cell Events: 190 mean_circ: 0.945356
Ran for 8050 frames Cell Events: 211 mean_circ: 0.946094
Ran for 9050 frames Cell Events: 240 mean_circ: 0.945717
Ran for 9550 frames Cell Events: 258 mean_circ: 0.944936
Ran for 10050 frames Cell Events: 288 mean_circ: 0.943647
Ran for 10550 frames Cell Events: 299 mean_circ: 0.9418
Ran for 12050 frames Cell Events: 338 mean_circ: 0.941707
Ran for 12550 frames Cell Events: 355 mean_circ: 0.942415
Ran for 13050 frames Cell Events: 366 mean_circ: 0.942206
Ran for 13550 frames Cell Events: 378 mean_circ: 0.942132
Ran for 14050 frames Cell Events: 388 mean_circ: 0.942012
Ran for 15050 frames Cell Events: 417 mean_circ: 0.942339
Ran for 16050 frames Cell Events: 452 mean_circ: 0.942575
Ran for 16550 frames Cell Events: 474 mean_circ: 0.941406
Ran for 17050 frames Cell Events: 490 mean_circ: 0.941237
Ran for 17550 frames Cell Events: 505 mean_circ: 0.941094
Ran for 18050 frames Cell Events: 516 mean_circ: 0.941013
Ran for 18550 frames Cell Events: 524 mean_circ: 0.940864
Ran for 19050 frames Cell Events: 538 mean_circ: 0.940759
Ran for 20550 frames Cell Events: 592 mean_circ: 0.94035
Ran for 21550 frames Cell Events: 616 mean_circ: 0.940199
Ran for 22050 frames Cell Events: 632 mean_circ: 0.939954
Ran for 22550 frames Cell Events: 641 mean_circ: 0.94014
Ran for 23550 frames Cell Events: 669 mean_circ: 0.940325
Ran for 24050 frames Cell Events: 680 mean_circ: 0.940493
Ran for 25050 frames Cell Events: 712 mean_circ: 0.939941
Ran for 25550 frames Cell Events: 724 mean_circ: 0.940537
Ran for 26550 frames Cell Events: 757 mean_circ: 0.939375
Ran for 28550 frames Cell Events: 815 mean_circ: 0.94019
Ran for 29050 frames Cell Events: 828 mean_circ: 0.940247
Ran for 31050 frames Cell Events: 889 mean_circ: 0.940737
Ran for 32050 frames Cell Events: 905 mean_circ: 0.940054
Ran for 33050 frames Cell Events: 936 mean_circ: 0.939824
Ran for 34550 frames Cell Events: 978 mean_circ: 0.939706
Ran for 36050 frames Cell Events: 1021 mean_circ: 0.93934
Ran for 36550 frames Cell Events: 1045 mean_circ: 0.938981
Ran for 37050 frames Cell Events: 1055 mean_circ: 0.938548
Ran for 37550 frames Cell Events: 1068 mean_circ: 0.938588
Ran for 38050 frames Cell Events: 1074 mean_circ: 0.938532
Ran for 39550 frames Cell Events: 1133 mean_circ: 0.938533
Ran for 40550 frames Cell Events: 1164 mean_circ: 0.938486
Ran for 41050 frames Cell Events: 1170 mean_circ: 0.938528
Ran for 41550 frames Cell Events: 1178 mean_circ: 0.938597
Ran for 42050 frames Cell Events: 1193 mean_circ: 0.938758
Ran for 43550 frames Cell Events: 1231 mean_circ: 0.93856
Ran for 44050 frames Cell Events: 1248 mean_circ: 0.938324
Ran for 45550 frames Cell Events: 1295 mean_circ: 0.93825
Ran for 46050 frames Cell Events: 1307 mean_circ: 0.938162
Ran for 47550 frames Cell Events: 1347 mean_circ: 0.938055
Ran for 48550 frames Cell Events: 1369 mean_circ: 0.937965
Ran for 49050 frames Cell Events: 1378 mean_circ: 0.938068
Ran for 49550 frames Cell Events: 1400 mean_circ: 0.938085
Ran for 50050 frames Cell Events: 1413 mean_circ: 0.938024
Ran for 51050 frames Cell Events: 1435 mean_circ: 0.938243
Ran for 51550 frames Cell Events: 1441 mean_circ: 0.938287
Ran for 52050 frames Cell Events: 1454 mean_circ: 0.938275
Ran for 52550 frames Cell Events: 1465 mean_circ: 0.938294
Ran for 53050 frames Cell Events: 1472 mean_circ: 0.938339
Ran for 54050 frames Cell Events: 1489 mean_circ: 0.938098
Ran for 55050 frames Cell Events: 1517 mean_circ: 0.937846
Ran for 55550 frames Cell Events: 1533 mean_circ: 0.937501
Ran for 56050 frames Cell Events: 1553 mean_circ: 0.937447
Ran for 56550 frames Cell Events: 1565 mean_circ: 0.937522
Ran for 57050 frames Cell Events: 1578 mean_circ: 0.937471
Ran for 57550 frames Cell Events: 1591 mean_circ: 0.937393
Ran for 58050 frames Cell Events: 1607 mean_circ: 0.937286
Ran for 58550 frames Cell Events: 1623 mean_circ: 0.937028
Ran for 59050 frames Cell Events: 1636 mean_circ: 0.936894
Ran for 60550 frames Cell Events: 1669 mean_circ: 0.936628
Ran for 61050 frames Cell Events: 1683 mean_circ: 0.936508
Ran for 61550 frames Cell Events: 1695 mean_circ: 0.936493
Ran for 62050 frames Cell Events: 1706 mean_circ: 0.936575
Ran for 62550 frames Cell Events: 1719 mean_circ: 0.936483
Ran for 63050 frames Cell Events: 1729 mean_circ: 0.936492
Ran for 63550 frames Cell Events: 1740 mean_circ: 0.936659
Ran for 64050 frames Cell Events: 1747 mean_circ: 0.936613
Ran for 64550 frames Cell Events: 1767 mean_circ: 0.93674
Ran for 65050 frames Cell Events: 1775 mean_circ: 0.936763
Ran for 65550 frames Cell Events: 1784 mean_circ: 0.936853
Ran for 66050 frames Cell Events: 1797 mean_circ: 0.936853
Ran for 66550 frames Cell Events: 1806 mean_circ: 0.936921
Ran for 67050 frames Cell Events: 1821 mean_circ: 0.936927
Ran for 68050 frames Cell Events: 1849 mean_circ: 0.937019
Ran for 68550 frames Cell Events: 1861 mean_circ: 0.936967
Ran for 69050 frames Cell Events: 1871 mean_circ: 0.936952
Ran for 69550 frames Cell Events: 1889 mean_circ: 0.936882
Ran for 70050 frames Cell Events: 1899 mean_circ: 0.937011
Ran for 70550 frames Cell Events: 1909 mean_circ: 0.937051
Ran for 71050 frames Cell Events: 1923 mean_circ: 0.937192
Ran for 72550 frames Cell Events: 1965 mean_circ: 0.937229
Ran for 74050 frames Cell Events: 2020 mean_circ: 0.937616
Ran for 75050 frames Cell Events: 2051 mean_circ: 0.937851
Ran for 76050 frames Cell Events: 2072 mean_circ: 0.937941
Ran for 76550 frames Cell Events: 2093 mean_circ: 0.937852
Ran for 77050 frames Cell Events: 2115 mean_circ: 0.937556
Ran for 77550 frames Cell Events: 2135 mean_circ: 0.93737
Ran for 78050 frames Cell Events: 2141 mean_circ: 0.937362
Ran for 78550 frames Cell Events: 2151 mean_circ: 0.937279
Ran for 79550 frames Cell Events: 2188 mean_circ: 0.937277
Ran for 80050 frames Cell Events: 2202 mean_circ: 0.937581
Ran for 81050 frames Cell Events: 2230 mean_circ: 0.937557
Ran for 81550 frames Cell Events: 2241 mean_circ: 0.93753
Ran for 82050 frames Cell Events: 2257 mean_circ: 0.937503
Ran for 82550 frames Cell Events: 2271 mean_circ: 0.937614
Ran for 83050 frames Cell Events: 2286 mean_circ: 0.937629
Ran for 84050 frames Cell Events: 2307 mean_circ: 0.937654
Ran for 84550 frames Cell Events: 2326 mean_circ: 0.937759
Ran for 85050 frames Cell Events: 2359 mean_circ: 0.93763
Ran for 85550 frames Cell Events: 2372 mean_circ: 0.937772
Ran for 86050 frames Cell Events: 2387 mean_circ: 0.937768
Ran for 87050 frames Cell Events: 2412 mean_circ: 0.937875
Ran for 87550 frames Cell Events: 2429 mean_circ: 0.937893
Ran for 88050 frames Cell Events: 2437 mean_circ: 0.937941
Ran for 88550 frames Cell Events: 2446 mean_circ: 0.937956
Ran for 89050 frames Cell Events: 2460 mean_circ: 0.937966
Ran for 89550 frames Cell Events: 2479 mean_circ: 0.937857
Ran for 90050 frames Cell Events: 2492 mean_circ: 0.937919
Ran for 91050 frames Cell Events: 2531 mean_circ: 0.937883
Ran for 91550 frames Cell Events: 2542 mean_circ: 0.937935
Ran for 92050 frames Cell Events: 2554 mean_circ: 0.93796
Ran for 92550 frames Cell Events: 2567 mean_circ: 0.937953
Ran for 93050 frames Cell Events: 2582 mean_circ: 0.938007
Ran for 93550 frames Cell Events: 2588 mean_circ: 0.938017
Ran for 94050 frames Cell Events: 2595 mean_circ: 0.938049
Ran for 94550 frames Cell Events: 2608 mean_circ: 0.938058
Ran for 95050 frames Cell Events: 2623 mean_circ: 0.938123
Ran for 96050 frames Cell Events: 2659 mean_circ: 0.938126
Ran for 97050 frames Cell Events: 2690 mean_circ: 0.938191
Ran for 98050 frames Cell Events: 2726 mean_circ: 0.938388
Ran for 99550 frames Cell Events: 2772 mean_circ: 0.938254
Ran for 100050 frames Cell Events: 2784 mean_circ: 0.938285
Ran for 100550 frames Cell Events: 2798 mean_circ: 0.938274
Ran for 101050 frames Cell Events: 2818 mean_circ: 0.938281
Ran for 101550 frames Cell Events: 2830 mean_circ: 0.938363
Ran for 102050 frames Cell Events: 2840 mean_circ: 0.938372
Ran for 102550 frames Cell Events: 2853 mean_circ: 0.938435
Ran for 103050 frames Cell Events: 2867 mean_circ: 0.938384
Ran for 104550 frames Cell Events: 2906 mean_circ: 0.938316
Ran for 105050 frames Cell Events: 2916 mean_circ: 0.938375
Ran for 107050 frames Cell Events: 2977 mean_circ: 0.938512
Ran for 107550 frames Cell Events: 2989 mean_circ: 0.938436
Ran for 108050 frames Cell Events: 3010 mean_circ: 0.938315
Ran for 109050 frames Cell Events: 3042 mean_circ: 0.938396
Ran for 109550 frames Cell Events: 3057 mean_circ: 0.938479
Ran for 110550 frames Cell Events: 3077 mean_circ: 0.938602
Ran for 111050 frames Cell Events: 3093 mean_circ: 0.938605
Ran for 111550 frames Cell Events: 3105 mean_circ: 0.938508
Ran for 112550 frames Cell Events: 3143 mean_circ: 0.938504
Ran for 113050 frames Cell Events: 3152 mean_circ: 0.938518
Ran for 113550 frames Cell Events: 3165 mean_circ: 0.938485
Ran for 114050 frames Cell Events: 3175 mean_circ: 0.938487
Ran for 115050 frames Cell Events: 3203 mean_circ: 0.938593
Ran for 115550 frames Cell Events: 3215 mean_circ: 0.93857
Ran for 116550 frames Cell Events: 3232 mean_circ: 0.938526
Ran for 117050 frames Cell Events: 3249 mean_circ: 0.938507
Ran for 119050 frames Cell Events: 3300 mean_circ: 0.938589
Ran for 119550 frames Cell Events: 3323 mean_circ: 0.938588
Ran for 121050 frames Cell Events: 3373 mean_circ: 0.938554
Ran for 121550 frames Cell Events: 3389 mean_circ: 0.938516
Ran for 122050 frames Cell Events: 3403 mean_circ: 0.938498
Ran for 122550 frames Cell Events: 3409 mean_circ: 0.938435
Ran for 123050 frames Cell Events: 3425 mean_circ: 0.938467
Ran for 123550 frames Cell Events: 3432 mean_circ: 0.938385
Ran for 124050 frames Cell Events: 3448 mean_circ: 0.938465
Ran for 124550 frames Cell Events: 3458 mean_circ: 0.938466
Ran for 125050 frames Cell Events: 3467 mean_circ: 0.93842
Ran for 125550 frames Cell Events: 3490 mean_circ: 0.938503
Ran for 126550 frames Cell Events: 3525 mean_circ: 0.9385
Ran for 127050 frames Cell Events: 3532 mean_circ: 0.938529
Ran for 127550 frames Cell Events: 3558 mean_circ: 0.93855
Ran for 128050 frames Cell Events: 3571 mean_circ: 0.938488
Ran for 128550 frames Cell Events: 3589 mean_circ: 0.938436
Ran for 129550 frames Cell Events: 3614 mean_circ: 0.938427
Ran for 131050 frames Cell Events: 3663 mean_circ: 0.938246
Ran for 131550 frames Cell Events: 3674 mean_circ: 0.938256
Ran for 132050 frames Cell Events: 3679 mean_circ: 0.938276
Ran for 132550 frames Cell Events: 3693 mean_circ: 0.938298
Ran for 133050 frames Cell Events: 3700 mean_circ: 0.938246
Ran for 133550 frames Cell Events: 3715 mean_circ: 0.938246
Ran for 134050 frames Cell Events: 3735 mean_circ: 0.938214
Ran for 134550 frames Cell Events: 3751 mean_circ: 0.938127
Ran for 135050 frames Cell Events: 3766 mean_circ: 0.938138
Ran for 136550 frames Cell Events: 3818 mean_circ: 0.938131
Ran for 137050 frames Cell Events: 3833 mean_circ: 0.938159
Ran for 137550 frames Cell Events: 3849 mean_circ: 0.938178
Ran for 138050 frames Cell Events: 3873 mean_circ: 0.938217
Ran for 138550 frames Cell Events: 3888 mean_circ: 0.938216
Ran for 139050 frames Cell Events: 3899 mean_circ: 0.938173
Ran for 139550 frames Cell Events: 3909 mean_circ: 0.938206
Ran for 140050 frames Cell Events: 3917 mean_circ: 0.938221
Ran for 141050 frames Cell Events: 3937 mean_circ: 0.938166
Ran for 141550 frames Cell Events: 3953 mean_circ: 0.938125
Ran for 142050 frames Cell Events: 3976 mean_circ: 0.938179
Ran for 142550 frames Cell Events: 3992 mean_circ: 0.938153
Ran for 143050 frames Cell Events: 3998 mean_circ: 0.938183
Ran for 144050 frames Cell Events: 4038 mean_circ: 0.938217
Ran for 144550 frames Cell Events: 4055 mean_circ: 0.938218
Ran for 145050 frames Cell Events: 4075 mean_circ: 0.938218
Ran for 146050 frames Cell Events: 4110 mean_circ: 0.938307
Ran for 146550 frames Cell Events: 4123 mean_circ: 0.938339
Ran for 148050 frames Cell Events: 4176 mean_circ: 0.938274
Ran for 148550 frames Cell Events: 4197 mean_circ: 0.938292
Ran for 149050 frames Cell Events: 4212 mean_circ: 0.938246
Ran for 149550 frames Cell Events: 4226 mean_circ: 0.938245
Ran for 150050 frames Cell Events: 4243 mean_circ: 0.938221
Ran for 150550 frames Cell Events: 4256 mean_circ: 0.938198
Ran for 151050 frames Cell Events: 4266 mean_circ: 0.938289
Ran for 151550 frames Cell Events: 4285 mean_circ: 0.938309
Ran for 152050 frames Cell Events: 4295 mean_circ: 0.938305
Ran for 152550 frames Cell Events: 4311 mean_circ: 0.938359
Ran for 153050 frames Cell Events: 4327 mean_circ: 0.938357
Ran for 153550 frames Cell Events: 4343 mean_circ: 0.938333
Ran for 154550 frames Cell Events: 4376 mean_circ: 0.93835
Ran for 155050 frames Cell Events: 4391 mean_circ: 0.938409
Ran for 155550 frames Cell Events: 4414 mean_circ: 0.938416
Ran for 156050 frames Cell Events: 4424 mean_circ: 0.938412
Ran for 157050 frames Cell Events: 4450 mean_circ: 0.938394
Ran for 157550 frames Cell Events: 4469 mean_circ: 0.938366
Ran for 158050 frames Cell Events: 4480 mean_circ: 0.938355
Ran for 158550 frames Cell Events: 4489 mean_circ: 0.938384
Ran for 159050 frames Cell Events: 4505 mean_circ: 0.938373
Ran for 159550 frames Cell Events: 4520 mean_circ: 0.938359
Ran for 160550 frames Cell Events: 4553 mean_circ: 0.938392
Ran for 161050 frames Cell Events: 4568 mean_circ: 0.938387
Ran for 161550 frames Cell Events: 4577 mean_circ: 0.938384
Ran for 162050 frames Cell Events: 4586 mean_circ: 0.938415
Ran for 162550 frames Cell Events: 4596 mean_circ: 0.938377
Ran for 163550 frames Cell Events: 4633 mean_circ: 0.93827
Ran for 164050 frames Cell Events: 4650 mean_circ: 0.938316
Ran for 164550 frames Cell Events: 4661 mean_circ: 0.938293
Ran for 165050 frames Cell Events: 4677 mean_circ: 0.938325
Ran for 165550 frames Cell Events: 4694 mean_circ: 0.938333
Ran for 166050 frames Cell Events: 4713 mean_circ: 0.938317
Ran for 166550 frames Cell Events: 4730 mean_circ: 0.93825
Ran for 167050 frames Cell Events: 4741 mean_circ: 0.938185
Ran for 168050 frames Cell Events: 4765 mean_circ: 0.93821
Ran for 168550 frames Cell Events: 4779 mean_circ: 0.93816
Ran for 170050 frames Cell Events: 4821 mean_circ: 0.938149
Ran for 170550 frames Cell Events: 4839 mean_circ: 0.938113
Ran for 171050 frames Cell Events: 4850 mean_circ: 0.938112
Ran for 171550 frames Cell Events: 4867 mean_circ: 0.938133
Ran for 172050 frames Cell Events: 4883 mean_circ: 0.938107
Ran for 173050 frames Cell Events: 4914 mean_circ: 0.938123
Ran for 173550 frames Cell Events: 4924 mean_circ: 0.93813
Ran for 174550 frames Cell Events: 4946 mean_circ: 0.93819
Ran for 176050 frames Cell Events: 4991 mean_circ: 0.938235
Ran for 176550 frames Cell Events: 5007 mean_circ: 0.938267
Ran for 178050 frames Cell Events: 5044 mean_circ: 0.93829
Ran for 178550 frames Cell Events: 5056 mean_circ: 0.938321
Ran for 179050 frames Cell Events: 5073 mean_circ: 0.938357
Ran for 180550 frames Cell Events: 5117 mean_circ: 0.938355
Ran for 181550 frames Cell Events: 5153 mean_circ: 0.938343
Ran for 182050 frames Cell Events: 5167 mean_circ: 0.938335
Ran for 183050 frames Cell Events: 5203 mean_circ: 0.938362
Ran for 183550 frames Cell Events: 5219 mean_circ: 0.938345
Ran for 184050 frames Cell Events: 5228 mean_circ: 0.938323
Ran for 184550 frames Cell Events: 5241 mean_circ: 0.938352
Ran for 185550 frames Cell Events: 5269 mean_circ: 0.93841
Ran for 186550 frames Cell Events: 5307 mean_circ: 0.938488
Ran for 187550 frames Cell Events: 5331 mean_circ: 0.938401
Ran for 188050 frames Cell Events: 5343 mean_circ: 0.938387
Ran for 188550 frames Cell Events: 5359 mean_circ: 0.938394
Ran for 189050 frames Cell Events: 5384 mean_circ: 0.938409
Ran for 189550 frames Cell Events: 5401 mean_circ: 0.938382
Ran for 190050 frames Cell Events: 5421 mean_circ: 0.938397
Ran for 192050 frames Cell Events: 5473 mean_circ: 0.938455
Ran for 192550 frames Cell Events: 5486 mean_circ: 0.938467
Ran for 193050 frames Cell Events: 5495 mean_circ: 0.938449
Ran for 193550 frames Cell Events: 5503 mean_circ: 0.938475
Ran for 194050 frames Cell Events: 5521 mean_circ: 0.938479
Ran for 194550 frames Cell Events: 5529 mean_circ: 0.938476
Ran for 196050 frames Cell Events: 5580 mean_circ: 0.938577
Ran for 197050 frames Cell Events: 5601 mean_circ: 0.938608
Ran for 197550 frames Cell Events: 5617 mean_circ: 0.938615
Ran for 198050 frames Cell Events: 5633 mean_circ: 0.93863
Ran for 198550 frames Cell Events: 5654 mean_circ: 0.938652
Ran for 199050 frames Cell Events: 5673 mean_circ: 0.938677
Ran for 199550 frames Cell Events: 5681 mean_circ: 0.938641
Ran for 200050 frames Cell Events: 5696 mean_circ: 0.93866
Ran for 200550 frames Cell Events: 5713 mean_circ: 0.938659
Ran for 201550 frames Cell Events: 5733 mean_circ: 0.938585
Ran for 202050 frames Cell Events: 5753 mean_circ: 0.938541
Ran for 202550 frames Cell Events: 5775 mean_circ: 0.938484
Ran for 203050 frames Cell Events: 5798 mean_circ: 0.93844
Ran for 203550 frames Cell Events: 5805 mean_circ: 0.938446
Ran for 204550 frames Cell Events: 5844 mean_circ: 0.938455
Ran for 206050 frames Cell Events: 5900 mean_circ: 0.938404
Ran for 206550 frames Cell Events: 5916 mean_circ: 0.938393
Ran for 207550 frames Cell Events: 5951 mean_circ: 0.938288
Ran for 208050 frames Cell Events: 5976 mean_circ: 0.938288
Ran for 209050 frames Cell Events: 6011 mean_circ: 0.938355
Ran for 209550 frames Cell Events: 6021 mean_circ: 0.938339
Ran for 210050 frames Cell Events: 6036 mean_circ: 0.938318
Ran for 212050 frames Cell Events: 6094 mean_circ: 0.938303
Ran for 212550 frames Cell Events: 6114 mean_circ: 0.938331
Ran for 213050 frames Cell Events: 6133 mean_circ: 0.938353
Ran for 213550 frames Cell Events: 6151 mean_circ: 0.938338
Ran for 214550 frames Cell Events: 6190 mean_circ: 0.938339
Ran for 215050 frames Cell Events: 6196 mean_circ: 0.938315
Ran for 215550 frames Cell Events: 6209 mean_circ: 0.938305
Ran for 216050 frames Cell Events: 6222 mean_circ: 0.938331
Ran for 216550 frames Cell Events: 6231 mean_circ: 0.938314
Ran for 217050 frames Cell Events: 6239 mean_circ: 0.938311
Ran for 217550 frames Cell Events: 6253 mean_circ: 0.938309
Ran for 218050 frames Cell Events: 6265 mean_circ: 0.93833
Ran for 218550 frames Cell Events: 6275 mean_circ: 0.938346
Ran for 219050 frames Cell Events: 6291 mean_circ: 0.938377
Ran for 219550 frames Cell Events: 6311 mean_circ: 0.938404
Ran for 220050 frames Cell Events: 6323 mean_circ: 0.938421
Ran for 221050 frames Cell Events: 6346 mean_circ: 0.938471
Ran for 221550 frames Cell Events: 6355 mean_circ: 0.938476
Ran for 222050 frames Cell Events: 6373 mean_circ: 0.938475
Ran for 222550 frames Cell Events: 6388 mean_circ: 0.938515
Ran for 223050 frames Cell Events: 6405 mean_circ: 0.938494
Ran for 223550 frames Cell Events: 6420 mean_circ: 0.938453
Ran for 224050 frames Cell Events: 6440 mean_circ: 0.938451
Ran for 225050 frames Cell Events: 6469 mean_circ: 0.938479
Ran for 226050 frames Cell Events: 6500 mean_circ: 0.93843
Ran for 226550 frames Cell Events: 6508 mean_circ: 0.938433
Ran for 227550 frames Cell Events: 6559 mean_circ: 0.938402
Ran for 228550 frames Cell Events: 6595 mean_circ: 0.938409
Ran for 229050 frames Cell Events: 6612 mean_circ: 0.938456
Ran for 229550 frames Cell Events: 6633 mean_circ: 0.93848
Ran for 230550 frames Cell Events: 6656 mean_circ: 0.938498
Ran for 231050 frames Cell Events: 6665 mean_circ: 0.938527
Ran for 232050 frames Cell Events: 6686 mean_circ: 0.938496
Ran for 233050 frames Cell Events: 6709 mean_circ: 0.938502
Ran for 233550 frames Cell Events: 6725 mean_circ: 0.938529
Ran for 234050 frames Cell Events: 6746 mean_circ: 0.938505
Ran for 234550 frames Cell Events: 6766 mean_circ: 0.938507
Ran for 235050 frames Cell Events: 6783 mean_circ: 0.938533
Ran for 236550 frames Cell Events: 6849 mean_circ: 0.938478
Ran for 237050 frames Cell Events: 6865 mean_circ: 0.938456
Ran for 237550 frames Cell Events: 6881 mean_circ: 0.938448
Ran for 238050 frames Cell Events: 6894 mean_circ: 0.938426
Ran for 238550 frames Cell Events: 6914 mean_circ: 0.938392
Ran for 239550 frames Cell Events: 6953 mean_circ: 0.938454
Ran for 241050 frames Cell Events: 6995 mean_circ: 0.938435
Ran for 242550 frames Cell Events: 7056 mean_circ: 0.938445
Ran for 243050 frames Cell Events: 7072 mean_circ: 0.93846
Ran for 244050 frames Cell Events: 7101 mean_circ: 0.938437
Ran for 244550 frames Cell Events: 7111 mean_circ: 0.938455
Ran for 245050 frames Cell Events: 7123 mean_circ: 0.938477
Ran for 245550 frames Cell Events: 7133 mean_circ: 0.938461
Ran for 246050 frames Cell Events: 7152 mean_circ: 0.93846
Ran for 246550 frames Cell Events: 7164 mean_circ: 0.938465
Ran for 247550 frames Cell Events: 7190 mean_circ: 0.93849
Ran for 248050 frames Cell Events: 7201 mean_circ: 0.938494
Ran for 248550 frames Cell Events: 7211 mean_circ: 0.938527
Ran for 249550 frames Cell Events: 7239 mean_circ: 0.93852
Ran for 250050 frames Cell Events: 7252 mean_circ: 0.938515
Ran for 250550 frames Cell Events: 7264 mean_circ: 0.938506
Ran for 251050 frames Cell Events: 7280 mean_circ: 0.938491
Ran for 251550 frames Cell Events: 7292 mean_circ: 0.938481
Ran for 252050 frames Cell Events: 7300 mean_circ: 0.938484
Ran for 253050 frames Cell Events: 7330 mean_circ: 0.938522
Ran for 253550 frames Cell Events: 7351 mean_circ: 0.938517
Ran for 254050 frames Cell Events: 7375 mean_circ: 0.938535
Ran for 254550 frames Cell Events: 7384 mean_circ: 0.938542
Ran for 255050 frames Cell Events: 7404 mean_circ: 0.938587
Ran for 255550 frames Cell Events: 7416 mean_circ: 0.938577
Ran for 256050 frames Cell Events: 7427 mean_circ: 0.938582
Ran for 256550 frames Cell Events: 7445 mean_circ: 0.938568
Ran for 257050 frames Cell Events: 7457 mean_circ: 0.938574
Ran for 257550 frames Cell Events: 7468 mean_circ: 0.938591
Ran for 258050 frames Cell Events: 7483 mean_circ: 0.938582
Ran for 258550 frames Cell Events: 7506 mean_circ: 0.938592
Ran for 259050 frames Cell Events: 7519 mean_circ: 0.938582
Ran for 259550 frames Cell Events: 7532 mean_circ: 0.938568
Ran for 260050 frames Cell Events: 7547 mean_circ: 0.938577
Ran for 260550 frames Cell Events: 7562 mean_circ: 0.93859
Ran for 261050 frames Cell Events: 7584 mean_circ: 0.938599
Ran for 261550 frames Cell Events: 7608 mean_circ: 0.938576
Ran for 263050 frames Cell Events: 7653 mean_circ: 0.938583
Ran for 263550 frames Cell Events: 7666 mean_circ: 0.938546
Ran for 266050 frames Cell Events: 7759 mean_circ: 0.938479
Ran for 266550 frames Cell Events: 7769 mean_circ: 0.938487
Ran for 267550 frames Cell Events: 7791 mean_circ: 0.938494
Ran for 268550 frames Cell Events: 7844 mean_circ: 0.938488
Ran for 269050 frames Cell Events: 7862 mean_circ: 0.938491
Ran for 269550 frames Cell Events: 7877 mean_circ: 0.938521
Ran for 270550 frames Cell Events: 7905 mean_circ: 0.938515
Ran for 271550 frames Cell Events: 7935 mean_circ: 0.938529
Ran for 272050 frames Cell Events: 7962 mean_circ: 0.938491
Ran for 272550 frames Cell Events: 7986 mean_circ: 0.938502
Ran for 273050 frames Cell Events: 8004 mean_circ: 0.938503
Ran for 273550 frames Cell Events: 8019 mean_circ: 0.938508
Ran for 275050 frames Cell Events: 8075 mean_circ: 0.93857
Ran for 275550 frames Cell Events: 8090 mean_circ: 0.938579
Ran for 276050 frames Cell Events: 8101 mean_circ: 0.93861
Ran for 276550 frames Cell Events: 8116 mean_circ: 0.938596
Ran for 277050 frames Cell Events: 8128 mean_circ: 0.938603
Ran for 277550 frames Cell Events: 8139 mean_circ: 0.938609
Ran for 278550 frames Cell Events: 8177 mean_circ: 0.938648
End this measurment..
Stopping time: 2.17949e+009
****************************************
Measurement finished
Mean Circularitiy: 0.938662
Mean Area: 668.873
Mean FL-1 intensity: 3611.99
Mean FL-2 intensity: 4266.27
Mean FL-3 intensity: 0
frames processed: 278676
Total Time: 139442ms
Number of Runs (new bg img) 0
Frames collected: 278739
Skipped frames: 22274
Rescued Frames: 2011237
Samples DAQ: 69684853
Samples written: 139369532
Samples per Channel: 69684766
FPS: 1998.96
Samples per second: 499740
Expected samples/s: 500000
Events: 8180
Events per second: 58.6624
jumped back (PMT): 5265
#Frames read, frequency
# 0 frames :386657
# 1 frames :150207
# 2 frames :6185
# 3 frames :2246
# 4 frames :1520
# 5 frames :659
# 6 frames :910
# 7 frames :2364
# 8 frames :1109
# 9 frames :985
# 10 frames :1038
# 11 frames :1185
# 12 frames :754
# 13 frames :440
# 14 frames :207
# 15 frames :164
# 16 frames :159
# 17 frames :145
# 18 frames :104
# 19 frames :78
# 20 frames :68
# 21 frames :53
# 22 frames :40
# 23 frames :34
# 24 frames :34
# 25 frames :26
# 26 frames :18
# 27 frames :14
# 28 frames :7
# 29 frames :10
# 30 frames :9
# 31 frames :5
# 32 frames :1
# 33 frames :4
# 34 frames :2
# 35 frames :4
# 36 frames :2
# 37 frames :1
# 38 frames :1
# 39 frames :1
# 40 frames :6
# 43 frames :1
# 46 frames :3
# 63 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.1982
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0