Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_15.01.43
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "24459af01581bd2e58956dc64237be14",
"name": "M1_20170609_1348_dsRNA_X8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:02:04"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8207 (max 8208) in '8207'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.2067
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.17954e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 12 mean_circ: 0.91388
Ran for 1050 frames Cell Events: 25 mean_circ: 0.927866
Ran for 2050 frames Cell Events: 48 mean_circ: 0.925567
Ran for 2550 frames Cell Events: 66 mean_circ: 0.932422
Ran for 3550 frames Cell Events: 99 mean_circ: 0.931822
Ran for 4050 frames Cell Events: 112 mean_circ: 0.931379
Ran for 4550 frames Cell Events: 131 mean_circ: 0.930906
Ran for 5550 frames Cell Events: 166 mean_circ: 0.930593
Ran for 6550 frames Cell Events: 200 mean_circ: 0.93161
Ran for 7050 frames Cell Events: 206 mean_circ: 0.932239
Ran for 7550 frames Cell Events: 221 mean_circ: 0.932417
Ran for 8050 frames Cell Events: 237 mean_circ: 0.933412
Ran for 9050 frames Cell Events: 265 mean_circ: 0.93405
Ran for 10050 frames Cell Events: 291 mean_circ: 0.933333
Ran for 11050 frames Cell Events: 322 mean_circ: 0.933048
Ran for 11550 frames Cell Events: 332 mean_circ: 0.932707
Ran for 12050 frames Cell Events: 342 mean_circ: 0.932779
Ran for 12550 frames Cell Events: 352 mean_circ: 0.933642
Ran for 13050 frames Cell Events: 367 mean_circ: 0.933544
Ran for 14550 frames Cell Events: 404 mean_circ: 0.933468
Ran for 15050 frames Cell Events: 420 mean_circ: 0.932729
Ran for 15550 frames Cell Events: 432 mean_circ: 0.932919
Ran for 16050 frames Cell Events: 439 mean_circ: 0.932811
Ran for 16550 frames Cell Events: 446 mean_circ: 0.933014
Ran for 17050 frames Cell Events: 453 mean_circ: 0.933422
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Ran for 20050 frames Cell Events: 540 mean_circ: 0.93307
Ran for 20550 frames Cell Events: 549 mean_circ: 0.933467
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Ran for 22550 frames Cell Events: 598 mean_circ: 0.933776
Ran for 23550 frames Cell Events: 624 mean_circ: 0.933917
Ran for 25050 frames Cell Events: 674 mean_circ: 0.934203
Ran for 25550 frames Cell Events: 688 mean_circ: 0.934729
Ran for 26550 frames Cell Events: 724 mean_circ: 0.934262
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Ran for 30550 frames Cell Events: 867 mean_circ: 0.934194
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Ran for 32050 frames Cell Events: 912 mean_circ: 0.934146
Ran for 33050 frames Cell Events: 936 mean_circ: 0.933867
Ran for 35050 frames Cell Events: 1007 mean_circ: 0.933438
Ran for 35550 frames Cell Events: 1022 mean_circ: 0.933333
Ran for 36550 frames Cell Events: 1062 mean_circ: 0.933023
Ran for 37550 frames Cell Events: 1089 mean_circ: 0.932946
Ran for 38050 frames Cell Events: 1104 mean_circ: 0.932653
Ran for 39050 frames Cell Events: 1135 mean_circ: 0.9328
Ran for 40050 frames Cell Events: 1162 mean_circ: 0.933003
Ran for 40550 frames Cell Events: 1187 mean_circ: 0.933098
Ran for 41550 frames Cell Events: 1213 mean_circ: 0.933035
Ran for 42050 frames Cell Events: 1230 mean_circ: 0.932975
Ran for 42550 frames Cell Events: 1250 mean_circ: 0.932972
Ran for 43550 frames Cell Events: 1281 mean_circ: 0.932987
Ran for 44550 frames Cell Events: 1306 mean_circ: 0.933062
Ran for 45050 frames Cell Events: 1321 mean_circ: 0.933019
Ran for 45550 frames Cell Events: 1337 mean_circ: 0.932843
Ran for 48050 frames Cell Events: 1427 mean_circ: 0.9329
Ran for 48550 frames Cell Events: 1441 mean_circ: 0.932791
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Ran for 51050 frames Cell Events: 1520 mean_circ: 0.932819
Ran for 52050 frames Cell Events: 1551 mean_circ: 0.932873
Ran for 52550 frames Cell Events: 1562 mean_circ: 0.932741
Ran for 53550 frames Cell Events: 1585 mean_circ: 0.932785
Ran for 54550 frames Cell Events: 1606 mean_circ: 0.932724
Ran for 55050 frames Cell Events: 1612 mean_circ: 0.932736
Ran for 55550 frames Cell Events: 1627 mean_circ: 0.93283
Ran for 56050 frames Cell Events: 1637 mean_circ: 0.932781
Ran for 59550 frames Cell Events: 1725 mean_circ: 0.932027
Ran for 61550 frames Cell Events: 1799 mean_circ: 0.932295
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Ran for 62550 frames Cell Events: 1836 mean_circ: 0.932358
Ran for 63050 frames Cell Events: 1846 mean_circ: 0.932255
Ran for 63550 frames Cell Events: 1861 mean_circ: 0.932298
Ran for 64550 frames Cell Events: 1897 mean_circ: 0.93236
Ran for 65550 frames Cell Events: 1916 mean_circ: 0.932314
Ran for 66550 frames Cell Events: 1942 mean_circ: 0.93237
Ran for 67050 frames Cell Events: 1956 mean_circ: 0.932416
Ran for 67550 frames Cell Events: 1970 mean_circ: 0.932447
Ran for 69050 frames Cell Events: 2015 mean_circ: 0.93237
Ran for 71050 frames Cell Events: 2073 mean_circ: 0.93235
Ran for 71550 frames Cell Events: 2091 mean_circ: 0.932158
Ran for 72050 frames Cell Events: 2104 mean_circ: 0.932077
Ran for 72550 frames Cell Events: 2122 mean_circ: 0.932176
Ran for 73050 frames Cell Events: 2145 mean_circ: 0.932007
Ran for 74550 frames Cell Events: 2196 mean_circ: 0.931676
Ran for 75550 frames Cell Events: 2223 mean_circ: 0.931555
Ran for 77550 frames Cell Events: 2307 mean_circ: 0.93129
Ran for 79050 frames Cell Events: 2359 mean_circ: 0.93118
Ran for 79550 frames Cell Events: 2389 mean_circ: 0.931174
Ran for 80550 frames Cell Events: 2436 mean_circ: 0.931111
Ran for 81050 frames Cell Events: 2447 mean_circ: 0.931128
Ran for 81550 frames Cell Events: 2465 mean_circ: 0.930943
Ran for 82050 frames Cell Events: 2483 mean_circ: 0.930978
Ran for 82550 frames Cell Events: 2492 mean_circ: 0.930948
Ran for 83050 frames Cell Events: 2504 mean_circ: 0.930906
Ran for 83550 frames Cell Events: 2529 mean_circ: 0.930938
Ran for 84550 frames Cell Events: 2564 mean_circ: 0.930858
Ran for 85550 frames Cell Events: 2608 mean_circ: 0.930933
Ran for 87050 frames Cell Events: 2655 mean_circ: 0.931068
Ran for 87550 frames Cell Events: 2672 mean_circ: 0.931122
Ran for 88050 frames Cell Events: 2684 mean_circ: 0.931084
Ran for 89050 frames Cell Events: 2716 mean_circ: 0.930932
Ran for 89550 frames Cell Events: 2735 mean_circ: 0.930949
Ran for 90550 frames Cell Events: 2770 mean_circ: 0.930976
Ran for 91550 frames Cell Events: 2793 mean_circ: 0.930882
Ran for 92550 frames Cell Events: 2823 mean_circ: 0.930939
Ran for 93050 frames Cell Events: 2837 mean_circ: 0.930982
Ran for 95050 frames Cell Events: 2928 mean_circ: 0.930762
Ran for 95550 frames Cell Events: 2942 mean_circ: 0.930738
Ran for 97050 frames Cell Events: 2987 mean_circ: 0.930709
Ran for 97550 frames Cell Events: 3005 mean_circ: 0.930676
Ran for 98050 frames Cell Events: 3029 mean_circ: 0.930746
Ran for 98550 frames Cell Events: 3051 mean_circ: 0.930715
Ran for 99050 frames Cell Events: 3065 mean_circ: 0.930727
Ran for 99550 frames Cell Events: 3079 mean_circ: 0.930812
Ran for 101550 frames Cell Events: 3144 mean_circ: 0.930797
Ran for 102550 frames Cell Events: 3195 mean_circ: 0.930768
Ran for 103050 frames Cell Events: 3209 mean_circ: 0.930723
Ran for 104050 frames Cell Events: 3250 mean_circ: 0.93073
Ran for 105050 frames Cell Events: 3279 mean_circ: 0.930609
Ran for 105550 frames Cell Events: 3291 mean_circ: 0.930598
Ran for 106050 frames Cell Events: 3318 mean_circ: 0.930382
Ran for 106550 frames Cell Events: 3335 mean_circ: 0.930386
Ran for 107050 frames Cell Events: 3348 mean_circ: 0.93049
Ran for 107550 frames Cell Events: 3363 mean_circ: 0.930496
Ran for 108550 frames Cell Events: 3401 mean_circ: 0.93061
Ran for 110050 frames Cell Events: 3444 mean_circ: 0.930555
Ran for 110550 frames Cell Events: 3462 mean_circ: 0.930579
Ran for 111050 frames Cell Events: 3473 mean_circ: 0.930606
Ran for 112050 frames Cell Events: 3509 mean_circ: 0.930677
Ran for 112550 frames Cell Events: 3520 mean_circ: 0.930637
Ran for 113050 frames Cell Events: 3543 mean_circ: 0.930633
Ran for 113550 frames Cell Events: 3560 mean_circ: 0.930619
Ran for 114050 frames Cell Events: 3568 mean_circ: 0.930584
Ran for 114550 frames Cell Events: 3587 mean_circ: 0.930566
Ran for 115550 frames Cell Events: 3617 mean_circ: 0.930582
Ran for 116050 frames Cell Events: 3635 mean_circ: 0.930571
Ran for 117550 frames Cell Events: 3686 mean_circ: 0.930486
Ran for 118050 frames Cell Events: 3698 mean_circ: 0.930451
Ran for 119050 frames Cell Events: 3733 mean_circ: 0.930417
Ran for 120050 frames Cell Events: 3769 mean_circ: 0.930374
Ran for 121050 frames Cell Events: 3811 mean_circ: 0.930305
Ran for 121550 frames Cell Events: 3828 mean_circ: 0.930321
Ran for 122050 frames Cell Events: 3846 mean_circ: 0.9303
Ran for 122550 frames Cell Events: 3872 mean_circ: 0.930336
Ran for 123550 frames Cell Events: 3913 mean_circ: 0.930421
Ran for 124050 frames Cell Events: 3930 mean_circ: 0.930425
Ran for 124550 frames Cell Events: 3937 mean_circ: 0.93041
Ran for 125050 frames Cell Events: 3953 mean_circ: 0.930417
Ran for 126550 frames Cell Events: 4009 mean_circ: 0.930438
Ran for 127050 frames Cell Events: 4032 mean_circ: 0.930421
Ran for 127550 frames Cell Events: 4056 mean_circ: 0.930447
Ran for 128050 frames Cell Events: 4080 mean_circ: 0.930427
Ran for 128550 frames Cell Events: 4095 mean_circ: 0.930377
Ran for 129050 frames Cell Events: 4119 mean_circ: 0.93037
Ran for 129550 frames Cell Events: 4134 mean_circ: 0.930409
Ran for 130550 frames Cell Events: 4171 mean_circ: 0.930382
Ran for 131550 frames Cell Events: 4220 mean_circ: 0.930379
Ran for 132050 frames Cell Events: 4227 mean_circ: 0.93037
Ran for 133550 frames Cell Events: 4289 mean_circ: 0.930312
Ran for 134050 frames Cell Events: 4302 mean_circ: 0.930314
Ran for 135050 frames Cell Events: 4337 mean_circ: 0.930313
Ran for 135550 frames Cell Events: 4359 mean_circ: 0.930331
Ran for 136050 frames Cell Events: 4378 mean_circ: 0.930315
Ran for 136550 frames Cell Events: 4401 mean_circ: 0.930326
Ran for 137050 frames Cell Events: 4414 mean_circ: 0.93038
Ran for 137550 frames Cell Events: 4428 mean_circ: 0.93041
Ran for 138050 frames Cell Events: 4444 mean_circ: 0.930511
Ran for 138550 frames Cell Events: 4460 mean_circ: 0.930481
Ran for 139050 frames Cell Events: 4476 mean_circ: 0.93044
Ran for 139550 frames Cell Events: 4489 mean_circ: 0.93045
Ran for 140050 frames Cell Events: 4512 mean_circ: 0.93047
Ran for 140550 frames Cell Events: 4521 mean_circ: 0.930511
Ran for 141050 frames Cell Events: 4542 mean_circ: 0.930529
Ran for 141550 frames Cell Events: 4557 mean_circ: 0.930521
Ran for 142050 frames Cell Events: 4572 mean_circ: 0.930547
Ran for 142550 frames Cell Events: 4578 mean_circ: 0.930547
Ran for 143050 frames Cell Events: 4595 mean_circ: 0.930585
Ran for 143550 frames Cell Events: 4616 mean_circ: 0.930551
Ran for 144050 frames Cell Events: 4639 mean_circ: 0.930522
Ran for 144550 frames Cell Events: 4655 mean_circ: 0.930558
Ran for 145550 frames Cell Events: 4694 mean_circ: 0.930502
Ran for 146050 frames Cell Events: 4714 mean_circ: 0.930546
Ran for 146550 frames Cell Events: 4729 mean_circ: 0.930495
Ran for 147050 frames Cell Events: 4745 mean_circ: 0.930484
Ran for 147550 frames Cell Events: 4753 mean_circ: 0.930496
Ran for 148050 frames Cell Events: 4771 mean_circ: 0.930397
Ran for 148550 frames Cell Events: 4788 mean_circ: 0.930434
Ran for 149050 frames Cell Events: 4803 mean_circ: 0.930426
Ran for 149550 frames Cell Events: 4817 mean_circ: 0.930434
Ran for 150050 frames Cell Events: 4842 mean_circ: 0.930383
Ran for 150550 frames Cell Events: 4864 mean_circ: 0.930361
Ran for 151550 frames Cell Events: 4903 mean_circ: 0.930475
Ran for 152050 frames Cell Events: 4928 mean_circ: 0.930417
Ran for 153050 frames Cell Events: 4959 mean_circ: 0.930415
Ran for 154050 frames Cell Events: 5005 mean_circ: 0.930469
Ran for 154550 frames Cell Events: 5028 mean_circ: 0.930444
Ran for 156550 frames Cell Events: 5099 mean_circ: 0.930404
Ran for 157050 frames Cell Events: 5118 mean_circ: 0.930455
Ran for 158550 frames Cell Events: 5177 mean_circ: 0.930529
Ran for 159050 frames Cell Events: 5193 mean_circ: 0.930575
Ran for 159550 frames Cell Events: 5215 mean_circ: 0.93059
Ran for 160550 frames Cell Events: 5249 mean_circ: 0.930473
Ran for 161050 frames Cell Events: 5271 mean_circ: 0.930506
Ran for 161550 frames Cell Events: 5289 mean_circ: 0.930439
Ran for 164050 frames Cell Events: 5358 mean_circ: 0.930405
Ran for 165050 frames Cell Events: 5401 mean_circ: 0.930422
Ran for 165550 frames Cell Events: 5421 mean_circ: 0.930346
Ran for 166050 frames Cell Events: 5446 mean_circ: 0.930376
Ran for 167050 frames Cell Events: 5485 mean_circ: 0.930323
Ran for 167550 frames Cell Events: 5509 mean_circ: 0.930344
Ran for 168050 frames Cell Events: 5529 mean_circ: 0.930361
Ran for 168550 frames Cell Events: 5549 mean_circ: 0.930301
Ran for 169050 frames Cell Events: 5574 mean_circ: 0.930295
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Ran for 170550 frames Cell Events: 5636 mean_circ: 0.930379
Ran for 171050 frames Cell Events: 5659 mean_circ: 0.930361
Ran for 172550 frames Cell Events: 5703 mean_circ: 0.930267
Ran for 173050 frames Cell Events: 5722 mean_circ: 0.930307
Ran for 173550 frames Cell Events: 5732 mean_circ: 0.93031
Ran for 174050 frames Cell Events: 5746 mean_circ: 0.930311
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Ran for 176550 frames Cell Events: 5826 mean_circ: 0.93028
Ran for 177050 frames Cell Events: 5835 mean_circ: 0.930251
Ran for 177550 frames Cell Events: 5853 mean_circ: 0.930286
Ran for 178550 frames Cell Events: 5901 mean_circ: 0.930321
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Ran for 180050 frames Cell Events: 5934 mean_circ: 0.930299
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Ran for 182550 frames Cell Events: 6021 mean_circ: 0.93032
Ran for 183050 frames Cell Events: 6033 mean_circ: 0.930281
Ran for 184050 frames Cell Events: 6077 mean_circ: 0.9303
Ran for 184550 frames Cell Events: 6094 mean_circ: 0.930286
Ran for 185050 frames Cell Events: 6118 mean_circ: 0.930224
Ran for 186050 frames Cell Events: 6144 mean_circ: 0.93025
Ran for 187550 frames Cell Events: 6199 mean_circ: 0.930257
Ran for 188050 frames Cell Events: 6214 mean_circ: 0.930247
Ran for 188550 frames Cell Events: 6228 mean_circ: 0.93029
Ran for 189050 frames Cell Events: 6242 mean_circ: 0.930257
Ran for 189550 frames Cell Events: 6264 mean_circ: 0.930303
Ran for 190050 frames Cell Events: 6275 mean_circ: 0.930313
Ran for 190550 frames Cell Events: 6288 mean_circ: 0.930359
Ran for 191550 frames Cell Events: 6321 mean_circ: 0.930288
Ran for 192050 frames Cell Events: 6338 mean_circ: 0.930278
Ran for 192550 frames Cell Events: 6354 mean_circ: 0.930308
Ran for 193050 frames Cell Events: 6368 mean_circ: 0.930352
Ran for 193550 frames Cell Events: 6387 mean_circ: 0.930318
Ran for 194050 frames Cell Events: 6401 mean_circ: 0.930355
Ran for 194550 frames Cell Events: 6418 mean_circ: 0.930375
Ran for 195050 frames Cell Events: 6432 mean_circ: 0.930375
Ran for 196550 frames Cell Events: 6478 mean_circ: 0.930461
Ran for 197050 frames Cell Events: 6500 mean_circ: 0.930435
Ran for 197550 frames Cell Events: 6517 mean_circ: 0.930456
Ran for 198550 frames Cell Events: 6566 mean_circ: 0.930463
Ran for 199050 frames Cell Events: 6584 mean_circ: 0.9305
Ran for 200050 frames Cell Events: 6621 mean_circ: 0.930471
Ran for 200550 frames Cell Events: 6634 mean_circ: 0.930483
Ran for 201550 frames Cell Events: 6664 mean_circ: 0.930528
Ran for 202050 frames Cell Events: 6689 mean_circ: 0.930525
Ran for 202550 frames Cell Events: 6702 mean_circ: 0.930556
Ran for 203050 frames Cell Events: 6718 mean_circ: 0.930566
Ran for 204050 frames Cell Events: 6758 mean_circ: 0.930574
Ran for 205050 frames Cell Events: 6797 mean_circ: 0.930544
Ran for 205550 frames Cell Events: 6809 mean_circ: 0.930556
Ran for 206550 frames Cell Events: 6856 mean_circ: 0.930473
Ran for 207050 frames Cell Events: 6872 mean_circ: 0.930446
Ran for 208550 frames Cell Events: 6934 mean_circ: 0.930471
Ran for 209050 frames Cell Events: 6949 mean_circ: 0.930464
Ran for 209550 frames Cell Events: 6962 mean_circ: 0.930471
Ran for 210050 frames Cell Events: 6982 mean_circ: 0.930483
Ran for 210550 frames Cell Events: 6988 mean_circ: 0.930502
Ran for 211050 frames Cell Events: 7004 mean_circ: 0.930506
Ran for 211550 frames Cell Events: 7015 mean_circ: 0.930508
Ran for 212550 frames Cell Events: 7055 mean_circ: 0.930462
Ran for 214550 frames Cell Events: 7121 mean_circ: 0.930396
Ran for 215050 frames Cell Events: 7133 mean_circ: 0.93035
Ran for 215550 frames Cell Events: 7143 mean_circ: 0.930338
Ran for 216050 frames Cell Events: 7156 mean_circ: 0.930354
Ran for 216550 frames Cell Events: 7169 mean_circ: 0.930301
Ran for 217050 frames Cell Events: 7176 mean_circ: 0.930317
Ran for 217550 frames Cell Events: 7188 mean_circ: 0.930306
Ran for 218050 frames Cell Events: 7215 mean_circ: 0.93024
Ran for 218550 frames Cell Events: 7225 mean_circ: 0.930242
Ran for 219550 frames Cell Events: 7262 mean_circ: 0.930217
Ran for 220550 frames Cell Events: 7290 mean_circ: 0.930208
Ran for 221550 frames Cell Events: 7318 mean_circ: 0.930204
Ran for 222050 frames Cell Events: 7337 mean_circ: 0.930228
Ran for 223050 frames Cell Events: 7367 mean_circ: 0.930221
Ran for 223550 frames Cell Events: 7391 mean_circ: 0.930238
Ran for 224050 frames Cell Events: 7407 mean_circ: 0.930284
Ran for 224550 frames Cell Events: 7427 mean_circ: 0.930265
Ran for 225050 frames Cell Events: 7438 mean_circ: 0.930287
Ran for 226550 frames Cell Events: 7476 mean_circ: 0.9303
Ran for 227050 frames Cell Events: 7497 mean_circ: 0.930303
Ran for 227550 frames Cell Events: 7513 mean_circ: 0.930267
Ran for 228050 frames Cell Events: 7538 mean_circ: 0.930268
Ran for 228550 frames Cell Events: 7562 mean_circ: 0.930222
Ran for 229050 frames Cell Events: 7580 mean_circ: 0.930131
Ran for 230050 frames Cell Events: 7606 mean_circ: 0.930096
Ran for 230550 frames Cell Events: 7615 mean_circ: 0.930087
Ran for 231550 frames Cell Events: 7649 mean_circ: 0.930113
Ran for 232050 frames Cell Events: 7668 mean_circ: 0.930099
Ran for 233550 frames Cell Events: 7726 mean_circ: 0.930075
Ran for 235050 frames Cell Events: 7776 mean_circ: 0.930089
Ran for 235550 frames Cell Events: 7792 mean_circ: 0.930102
Ran for 236050 frames Cell Events: 7813 mean_circ: 0.930089
Ran for 236550 frames Cell Events: 7839 mean_circ: 0.930012
Ran for 237050 frames Cell Events: 7853 mean_circ: 0.929974
Ran for 237550 frames Cell Events: 7872 mean_circ: 0.929991
Ran for 239050 frames Cell Events: 7920 mean_circ: 0.930039
Ran for 239550 frames Cell Events: 7935 mean_circ: 0.930062
Ran for 240050 frames Cell Events: 7944 mean_circ: 0.930067
Ran for 241050 frames Cell Events: 8011 mean_circ: 0.930092
Ran for 242050 frames Cell Events: 8061 mean_circ: 0.930076
Ran for 242550 frames Cell Events: 8076 mean_circ: 0.930103
Ran for 244050 frames Cell Events: 8117 mean_circ: 0.930068
Ran for 244550 frames Cell Events: 8141 mean_circ: 0.930043
Ran for 245050 frames Cell Events: 8161 mean_circ: 0.930056
End this measurment..
Stopping time: 2.17966e+009
****************************************
Measurement finished
Mean Circularitiy: 0.930088
Mean Area: 661.375
Mean FL-1 intensity: 3575.16
Mean FL-2 intensity: 4662.97
Mean FL-3 intensity: 0
frames processed: 244140
Total Time: 123050ms
Number of Runs (new bg img) 0
Frames collected: 245980
Skipped frames: 24114
Rescued Frames: 2114036
Samples DAQ: 61495041
Samples written: 122989780
Samples per Channel: 61494890
FPS: 1999.03
Samples per second: 499756
Expected samples/s: 500000
Events: 8208
Events per second: 66.7046
jumped back (PMT): 5255
#Frames read, frequency
# 0 frames :350591
# 1 frames :122675
# 2 frames :5423
# 3 frames :2101
# 4 frames :1045
# 5 frames :547
# 6 frames :1071
# 7 frames :2292
# 8 frames :1104
# 9 frames :879
# 10 frames :1106
# 11 frames :691
# 12 frames :522
# 13 frames :367
# 14 frames :216
# 15 frames :178
# 16 frames :191
# 17 frames :175
# 18 frames :161
# 19 frames :112
# 20 frames :104
# 21 frames :76
# 22 frames :71
# 23 frames :56
# 24 frames :29
# 25 frames :28
# 26 frames :22
# 27 frames :18
# 28 frames :6
# 29 frames :12
# 30 frames :10
# 31 frames :8
# 32 frames :4
# 33 frames :6
# 34 frames :7
# 35 frames :3
# 36 frames :2
# 37 frames :5
# 38 frames :2
# 39 frames :1
# 40 frames :1
# 41 frames :5
# 43 frames :2
# 44 frames :2
# 45 frames :1
# 46 frames :1
# 47 frames :1
# 49 frames :1
# 50 frames :1
# 51 frames :1
# 53 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.2067
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0