Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_15.10.16
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "2abb40c8d80b1bc906554bf7a093d728",
"name": "M1_20170609_1553_dsRNA_V5_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:10:35"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8141 (max 8142) in '8141'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.8005
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.18701e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 18 mean_circ: 0.927878
Ran for 1550 frames Cell Events: 28 mean_circ: 0.933387
Ran for 2050 frames Cell Events: 41 mean_circ: 0.927946
Ran for 2550 frames Cell Events: 55 mean_circ: 0.926485
Ran for 3050 frames Cell Events: 67 mean_circ: 0.926535
Ran for 4550 frames Cell Events: 93 mean_circ: 0.93026
Ran for 5050 frames Cell Events: 101 mean_circ: 0.928906
Ran for 5550 frames Cell Events: 111 mean_circ: 0.929588
Ran for 7050 frames Cell Events: 144 mean_circ: 0.929546
Ran for 7550 frames Cell Events: 151 mean_circ: 0.929991
Ran for 8550 frames Cell Events: 170 mean_circ: 0.930288
Ran for 9550 frames Cell Events: 190 mean_circ: 0.929904
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Ran for 76550 frames Cell Events: 1515 mean_circ: 0.931941
Ran for 77050 frames Cell Events: 1521 mean_circ: 0.932014
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Ran for 81550 frames Cell Events: 1632 mean_circ: 0.932017
Ran for 82050 frames Cell Events: 1644 mean_circ: 0.932142
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Ran for 83050 frames Cell Events: 1662 mean_circ: 0.93207
Ran for 83550 frames Cell Events: 1669 mean_circ: 0.931969
Ran for 84050 frames Cell Events: 1672 mean_circ: 0.932017
Ran for 84550 frames Cell Events: 1692 mean_circ: 0.931969
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Ran for 86050 frames Cell Events: 1718 mean_circ: 0.931718
Ran for 86550 frames Cell Events: 1731 mean_circ: 0.931623
Ran for 87050 frames Cell Events: 1744 mean_circ: 0.931368
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Ran for 92550 frames Cell Events: 1864 mean_circ: 0.931583
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Ran for 94550 frames Cell Events: 1916 mean_circ: 0.93138
Ran for 96050 frames Cell Events: 1944 mean_circ: 0.93131
Ran for 96550 frames Cell Events: 1955 mean_circ: 0.931281
Ran for 97050 frames Cell Events: 1966 mean_circ: 0.931351
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Ran for 112050 frames Cell Events: 2308 mean_circ: 0.931491
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Ran for 116050 frames Cell Events: 2404 mean_circ: 0.931285
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Ran for 120050 frames Cell Events: 2494 mean_circ: 0.931052
Ran for 121050 frames Cell Events: 2515 mean_circ: 0.931138
Ran for 122050 frames Cell Events: 2536 mean_circ: 0.931157
Ran for 122550 frames Cell Events: 2541 mean_circ: 0.931147
Ran for 124550 frames Cell Events: 2593 mean_circ: 0.931126
Ran for 125050 frames Cell Events: 2603 mean_circ: 0.931143
Ran for 126050 frames Cell Events: 2627 mean_circ: 0.931156
Ran for 127050 frames Cell Events: 2663 mean_circ: 0.931038
Ran for 127550 frames Cell Events: 2679 mean_circ: 0.930987
Ran for 129550 frames Cell Events: 2728 mean_circ: 0.931042
Ran for 130550 frames Cell Events: 2754 mean_circ: 0.930899
Ran for 131050 frames Cell Events: 2764 mean_circ: 0.930891
Ran for 133050 frames Cell Events: 2818 mean_circ: 0.930892
Ran for 133550 frames Cell Events: 2833 mean_circ: 0.93082
Ran for 134050 frames Cell Events: 2842 mean_circ: 0.930756
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Ran for 136050 frames Cell Events: 2887 mean_circ: 0.930784
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Ran for 147050 frames Cell Events: 3156 mean_circ: 0.93073
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Ran for 161550 frames Cell Events: 3454 mean_circ: 0.930471
Ran for 162050 frames Cell Events: 3460 mean_circ: 0.930502
Ran for 163050 frames Cell Events: 3475 mean_circ: 0.930442
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Ran for 166050 frames Cell Events: 3542 mean_circ: 0.930453
Ran for 166550 frames Cell Events: 3547 mean_circ: 0.930472
Ran for 167050 frames Cell Events: 3556 mean_circ: 0.930487
Ran for 167550 frames Cell Events: 3565 mean_circ: 0.930495
Ran for 168050 frames Cell Events: 3586 mean_circ: 0.930425
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Ran for 170550 frames Cell Events: 3674 mean_circ: 0.930227
Ran for 172050 frames Cell Events: 3713 mean_circ: 0.930175
Ran for 172550 frames Cell Events: 3722 mean_circ: 0.930167
Ran for 173050 frames Cell Events: 3726 mean_circ: 0.930191
Ran for 173550 frames Cell Events: 3740 mean_circ: 0.93022
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Ran for 176550 frames Cell Events: 3826 mean_circ: 0.93008
Ran for 177050 frames Cell Events: 3837 mean_circ: 0.930025
Ran for 177550 frames Cell Events: 3846 mean_circ: 0.930024
Ran for 178050 frames Cell Events: 3855 mean_circ: 0.929964
Ran for 178550 frames Cell Events: 3865 mean_circ: 0.92998
Ran for 179050 frames Cell Events: 3873 mean_circ: 0.929966
Ran for 179550 frames Cell Events: 3897 mean_circ: 0.929998
Ran for 180050 frames Cell Events: 3917 mean_circ: 0.93005
Ran for 180550 frames Cell Events: 3930 mean_circ: 0.930084
Ran for 181050 frames Cell Events: 3937 mean_circ: 0.930086
Ran for 182050 frames Cell Events: 3957 mean_circ: 0.930042
Ran for 182550 frames Cell Events: 3972 mean_circ: 0.929997
Ran for 183050 frames Cell Events: 3981 mean_circ: 0.930012
Ran for 184050 frames Cell Events: 4011 mean_circ: 0.929871
Ran for 185050 frames Cell Events: 4030 mean_circ: 0.929903
Ran for 185550 frames Cell Events: 4043 mean_circ: 0.929882
Ran for 186050 frames Cell Events: 4062 mean_circ: 0.929837
Ran for 186550 frames Cell Events: 4074 mean_circ: 0.929816
Ran for 188050 frames Cell Events: 4117 mean_circ: 0.92983
Ran for 188550 frames Cell Events: 4129 mean_circ: 0.92982
Ran for 189550 frames Cell Events: 4156 mean_circ: 0.929769
Ran for 190550 frames Cell Events: 4173 mean_circ: 0.929763
Ran for 191550 frames Cell Events: 4193 mean_circ: 0.929811
Ran for 192550 frames Cell Events: 4213 mean_circ: 0.929765
Ran for 193050 frames Cell Events: 4231 mean_circ: 0.929725
Ran for 193550 frames Cell Events: 4244 mean_circ: 0.929755
Ran for 194050 frames Cell Events: 4256 mean_circ: 0.929722
Ran for 195050 frames Cell Events: 4280 mean_circ: 0.929761
Ran for 196050 frames Cell Events: 4307 mean_circ: 0.929795
Ran for 197550 frames Cell Events: 4373 mean_circ: 0.929569
Ran for 198050 frames Cell Events: 4390 mean_circ: 0.929605
Ran for 198550 frames Cell Events: 4398 mean_circ: 0.929578
Ran for 199050 frames Cell Events: 4405 mean_circ: 0.929608
Ran for 199550 frames Cell Events: 4417 mean_circ: 0.92963
Ran for 200550 frames Cell Events: 4441 mean_circ: 0.929648
Ran for 201050 frames Cell Events: 4449 mean_circ: 0.929663
Ran for 201550 frames Cell Events: 4458 mean_circ: 0.929673
Ran for 202050 frames Cell Events: 4468 mean_circ: 0.929704
Ran for 202550 frames Cell Events: 4477 mean_circ: 0.929687
Ran for 203050 frames Cell Events: 4498 mean_circ: 0.929701
Ran for 203550 frames Cell Events: 4512 mean_circ: 0.929669
Ran for 204050 frames Cell Events: 4519 mean_circ: 0.929696
Ran for 204550 frames Cell Events: 4532 mean_circ: 0.929673
Ran for 205050 frames Cell Events: 4545 mean_circ: 0.929643
Ran for 205550 frames Cell Events: 4554 mean_circ: 0.929587
Ran for 206550 frames Cell Events: 4580 mean_circ: 0.929638
Ran for 207050 frames Cell Events: 4595 mean_circ: 0.929649
Ran for 207550 frames Cell Events: 4607 mean_circ: 0.929651
Ran for 208050 frames Cell Events: 4618 mean_circ: 0.929646
Ran for 208550 frames Cell Events: 4631 mean_circ: 0.929724
Ran for 209050 frames Cell Events: 4636 mean_circ: 0.929738
Ran for 210050 frames Cell Events: 4662 mean_circ: 0.929706
Ran for 211550 frames Cell Events: 4700 mean_circ: 0.929609
Ran for 212550 frames Cell Events: 4733 mean_circ: 0.92953
Ran for 213050 frames Cell Events: 4737 mean_circ: 0.929525
Ran for 213550 frames Cell Events: 4750 mean_circ: 0.929567
Ran for 214050 frames Cell Events: 4763 mean_circ: 0.929572
Ran for 215050 frames Cell Events: 4790 mean_circ: 0.9296
Ran for 215550 frames Cell Events: 4801 mean_circ: 0.929652
Ran for 216050 frames Cell Events: 4825 mean_circ: 0.929592
Ran for 217550 frames Cell Events: 4876 mean_circ: 0.929486
Ran for 218550 frames Cell Events: 4899 mean_circ: 0.929488
Ran for 219050 frames Cell Events: 4907 mean_circ: 0.929478
Ran for 219550 frames Cell Events: 4919 mean_circ: 0.929498
Ran for 220050 frames Cell Events: 4933 mean_circ: 0.929446
Ran for 220550 frames Cell Events: 4943 mean_circ: 0.929452
Ran for 221550 frames Cell Events: 4976 mean_circ: 0.929473
Ran for 222050 frames Cell Events: 4997 mean_circ: 0.92947
Ran for 223050 frames Cell Events: 5021 mean_circ: 0.929457
Ran for 223550 frames Cell Events: 5029 mean_circ: 0.929444
Ran for 224050 frames Cell Events: 5045 mean_circ: 0.929472
Ran for 224550 frames Cell Events: 5066 mean_circ: 0.929482
Ran for 225050 frames Cell Events: 5073 mean_circ: 0.92947
Ran for 225550 frames Cell Events: 5079 mean_circ: 0.92945
Ran for 226050 frames Cell Events: 5086 mean_circ: 0.929436
Ran for 226550 frames Cell Events: 5096 mean_circ: 0.92943
Ran for 227050 frames Cell Events: 5105 mean_circ: 0.929426
Ran for 228050 frames Cell Events: 5137 mean_circ: 0.929391
Ran for 228550 frames Cell Events: 5146 mean_circ: 0.929365
Ran for 229050 frames Cell Events: 5154 mean_circ: 0.929288
Ran for 229550 frames Cell Events: 5164 mean_circ: 0.929302
Ran for 230050 frames Cell Events: 5175 mean_circ: 0.929305
Ran for 230550 frames Cell Events: 5188 mean_circ: 0.929302
Ran for 231050 frames Cell Events: 5206 mean_circ: 0.929352
Ran for 231550 frames Cell Events: 5219 mean_circ: 0.929367
Ran for 232550 frames Cell Events: 5248 mean_circ: 0.929353
Ran for 233050 frames Cell Events: 5258 mean_circ: 0.929371
Ran for 233550 frames Cell Events: 5268 mean_circ: 0.929371
Ran for 234050 frames Cell Events: 5286 mean_circ: 0.929345
Ran for 234550 frames Cell Events: 5292 mean_circ: 0.929344
Ran for 235050 frames Cell Events: 5301 mean_circ: 0.929359
Ran for 235550 frames Cell Events: 5313 mean_circ: 0.929331
Ran for 236050 frames Cell Events: 5323 mean_circ: 0.929313
Ran for 236550 frames Cell Events: 5339 mean_circ: 0.929147
Ran for 237050 frames Cell Events: 5348 mean_circ: 0.929172
Ran for 238050 frames Cell Events: 5382 mean_circ: 0.929143
Ran for 238550 frames Cell Events: 5402 mean_circ: 0.929136
Ran for 239550 frames Cell Events: 5420 mean_circ: 0.929121
Ran for 240550 frames Cell Events: 5448 mean_circ: 0.929119
Ran for 241050 frames Cell Events: 5467 mean_circ: 0.929098
Ran for 242050 frames Cell Events: 5488 mean_circ: 0.929145
Ran for 242550 frames Cell Events: 5495 mean_circ: 0.929149
Ran for 243050 frames Cell Events: 5509 mean_circ: 0.929157
Ran for 243550 frames Cell Events: 5520 mean_circ: 0.929096
Ran for 244050 frames Cell Events: 5536 mean_circ: 0.929083
Ran for 244550 frames Cell Events: 5547 mean_circ: 0.929061
Ran for 245550 frames Cell Events: 5575 mean_circ: 0.92903
Ran for 246050 frames Cell Events: 5590 mean_circ: 0.929039
Ran for 246550 frames Cell Events: 5606 mean_circ: 0.929001
Ran for 247050 frames Cell Events: 5618 mean_circ: 0.928968
Ran for 247550 frames Cell Events: 5629 mean_circ: 0.928952
Ran for 248050 frames Cell Events: 5639 mean_circ: 0.928977
Ran for 248550 frames Cell Events: 5646 mean_circ: 0.928988
Ran for 249050 frames Cell Events: 5658 mean_circ: 0.928947
Ran for 249550 frames Cell Events: 5671 mean_circ: 0.928986
Ran for 250050 frames Cell Events: 5679 mean_circ: 0.928953
Ran for 251050 frames Cell Events: 5725 mean_circ: 0.92897
Ran for 251550 frames Cell Events: 5743 mean_circ: 0.928943
Ran for 252550 frames Cell Events: 5769 mean_circ: 0.928873
Ran for 254050 frames Cell Events: 5805 mean_circ: 0.928853
Ran for 255050 frames Cell Events: 5842 mean_circ: 0.928797
Ran for 255550 frames Cell Events: 5849 mean_circ: 0.928821
Ran for 256050 frames Cell Events: 5859 mean_circ: 0.928849
Ran for 256550 frames Cell Events: 5875 mean_circ: 0.928801
Ran for 257550 frames Cell Events: 5899 mean_circ: 0.928785
Ran for 258050 frames Cell Events: 5912 mean_circ: 0.92882
Ran for 259550 frames Cell Events: 5947 mean_circ: 0.928888
Ran for 260050 frames Cell Events: 5956 mean_circ: 0.928893
Ran for 260550 frames Cell Events: 5975 mean_circ: 0.928919
Ran for 261050 frames Cell Events: 5989 mean_circ: 0.92897
Ran for 261550 frames Cell Events: 6002 mean_circ: 0.928927
Ran for 262050 frames Cell Events: 6012 mean_circ: 0.928919
Ran for 262550 frames Cell Events: 6026 mean_circ: 0.92894
Ran for 263050 frames Cell Events: 6037 mean_circ: 0.92893
Ran for 263550 frames Cell Events: 6053 mean_circ: 0.928926
Ran for 264050 frames Cell Events: 6061 mean_circ: 0.928935
Ran for 264550 frames Cell Events: 6067 mean_circ: 0.928922
Ran for 265050 frames Cell Events: 6075 mean_circ: 0.928918
Ran for 265550 frames Cell Events: 6093 mean_circ: 0.928889
Ran for 266550 frames Cell Events: 6115 mean_circ: 0.928938
Ran for 267550 frames Cell Events: 6133 mean_circ: 0.928969
Ran for 268050 frames Cell Events: 6142 mean_circ: 0.928975
Ran for 269050 frames Cell Events: 6171 mean_circ: 0.928994
Ran for 269550 frames Cell Events: 6185 mean_circ: 0.929019
Ran for 270050 frames Cell Events: 6201 mean_circ: 0.928983
Ran for 270550 frames Cell Events: 6215 mean_circ: 0.928981
Ran for 271050 frames Cell Events: 6223 mean_circ: 0.928982
Ran for 271550 frames Cell Events: 6230 mean_circ: 0.928965
Ran for 272050 frames Cell Events: 6241 mean_circ: 0.928961
Ran for 273050 frames Cell Events: 6265 mean_circ: 0.928864
Ran for 273550 frames Cell Events: 6280 mean_circ: 0.928846
Ran for 274050 frames Cell Events: 6291 mean_circ: 0.928853
Ran for 274550 frames Cell Events: 6298 mean_circ: 0.928886
Ran for 275550 frames Cell Events: 6338 mean_circ: 0.928967
Ran for 276550 frames Cell Events: 6359 mean_circ: 0.928959
Ran for 277050 frames Cell Events: 6375 mean_circ: 0.928977
Ran for 277550 frames Cell Events: 6384 mean_circ: 0.929007
Ran for 278050 frames Cell Events: 6398 mean_circ: 0.929005
Ran for 278550 frames Cell Events: 6409 mean_circ: 0.928991
Ran for 279550 frames Cell Events: 6435 mean_circ: 0.929003
Ran for 280050 frames Cell Events: 6452 mean_circ: 0.929004
Ran for 280550 frames Cell Events: 6467 mean_circ: 0.929029
Ran for 281050 frames Cell Events: 6472 mean_circ: 0.929034
Ran for 281550 frames Cell Events: 6487 mean_circ: 0.929006
Ran for 282050 frames Cell Events: 6500 mean_circ: 0.929007
Ran for 282550 frames Cell Events: 6509 mean_circ: 0.929001
Ran for 283050 frames Cell Events: 6522 mean_circ: 0.928966
Ran for 283550 frames Cell Events: 6532 mean_circ: 0.928975
Ran for 284050 frames Cell Events: 6541 mean_circ: 0.928929
Ran for 284550 frames Cell Events: 6551 mean_circ: 0.928937
Ran for 286050 frames Cell Events: 6580 mean_circ: 0.928918
Ran for 286550 frames Cell Events: 6594 mean_circ: 0.928931
Ran for 287050 frames Cell Events: 6600 mean_circ: 0.928936
Ran for 288550 frames Cell Events: 6635 mean_circ: 0.92892
Ran for 289050 frames Cell Events: 6647 mean_circ: 0.928889
Ran for 289550 frames Cell Events: 6656 mean_circ: 0.928906
Ran for 290050 frames Cell Events: 6662 mean_circ: 0.928913
Ran for 290550 frames Cell Events: 6671 mean_circ: 0.92893
Ran for 291050 frames Cell Events: 6686 mean_circ: 0.92886
Ran for 291550 frames Cell Events: 6699 mean_circ: 0.928857
Ran for 292050 frames Cell Events: 6707 mean_circ: 0.928869
Ran for 292550 frames Cell Events: 6713 mean_circ: 0.928873
Ran for 293050 frames Cell Events: 6728 mean_circ: 0.928859
Ran for 294050 frames Cell Events: 6747 mean_circ: 0.928775
Ran for 294550 frames Cell Events: 6765 mean_circ: 0.928799
Ran for 295050 frames Cell Events: 6772 mean_circ: 0.928801
Ran for 295550 frames Cell Events: 6787 mean_circ: 0.928786
Ran for 296050 frames Cell Events: 6797 mean_circ: 0.928758
Ran for 296550 frames Cell Events: 6803 mean_circ: 0.928735
Ran for 297050 frames Cell Events: 6817 mean_circ: 0.928744
Ran for 297550 frames Cell Events: 6828 mean_circ: 0.928754
Ran for 298050 frames Cell Events: 6840 mean_circ: 0.928747
Ran for 298550 frames Cell Events: 6850 mean_circ: 0.928772
Ran for 299050 frames Cell Events: 6869 mean_circ: 0.928794
Ran for 299550 frames Cell Events: 6881 mean_circ: 0.928798
Ran for 300050 frames Cell Events: 6893 mean_circ: 0.928817
Ran for 300550 frames Cell Events: 6900 mean_circ: 0.928823
Ran for 301550 frames Cell Events: 6932 mean_circ: 0.928809
Ran for 302050 frames Cell Events: 6940 mean_circ: 0.928837
Ran for 302550 frames Cell Events: 6956 mean_circ: 0.928843
Ran for 303050 frames Cell Events: 6963 mean_circ: 0.92885
Ran for 303550 frames Cell Events: 6974 mean_circ: 0.928847
Ran for 304050 frames Cell Events: 6984 mean_circ: 0.928832
Ran for 304550 frames Cell Events: 6996 mean_circ: 0.928822
Ran for 305050 frames Cell Events: 7003 mean_circ: 0.928833
Ran for 305550 frames Cell Events: 7013 mean_circ: 0.928833
Ran for 306550 frames Cell Events: 7045 mean_circ: 0.928824
Ran for 307050 frames Cell Events: 7058 mean_circ: 0.928794
Ran for 307550 frames Cell Events: 7075 mean_circ: 0.928789
Ran for 308050 frames Cell Events: 7085 mean_circ: 0.928815
Ran for 308550 frames Cell Events: 7100 mean_circ: 0.928815
Ran for 309050 frames Cell Events: 7115 mean_circ: 0.928813
Ran for 309550 frames Cell Events: 7128 mean_circ: 0.928821
Ran for 310050 frames Cell Events: 7139 mean_circ: 0.928795
Ran for 310550 frames Cell Events: 7149 mean_circ: 0.928817
Ran for 311550 frames Cell Events: 7169 mean_circ: 0.928806
Ran for 312050 frames Cell Events: 7178 mean_circ: 0.928814
Ran for 312550 frames Cell Events: 7194 mean_circ: 0.928764
Ran for 313050 frames Cell Events: 7210 mean_circ: 0.928755
Ran for 314050 frames Cell Events: 7237 mean_circ: 0.928803
Ran for 314550 frames Cell Events: 7245 mean_circ: 0.928809
Ran for 315050 frames Cell Events: 7249 mean_circ: 0.928806
Ran for 316550 frames Cell Events: 7287 mean_circ: 0.928738
Ran for 317050 frames Cell Events: 7293 mean_circ: 0.928741
Ran for 318050 frames Cell Events: 7309 mean_circ: 0.928724
Ran for 318550 frames Cell Events: 7316 mean_circ: 0.928717
Ran for 319050 frames Cell Events: 7322 mean_circ: 0.928733
Ran for 319550 frames Cell Events: 7332 mean_circ: 0.928732
Ran for 320550 frames Cell Events: 7351 mean_circ: 0.928725
Ran for 321050 frames Cell Events: 7363 mean_circ: 0.928716
Ran for 321550 frames Cell Events: 7379 mean_circ: 0.928702
Ran for 322050 frames Cell Events: 7394 mean_circ: 0.928705
Ran for 323050 frames Cell Events: 7423 mean_circ: 0.928737
Ran for 324050 frames Cell Events: 7443 mean_circ: 0.928746
Ran for 324550 frames Cell Events: 7453 mean_circ: 0.928749
Ran for 326550 frames Cell Events: 7502 mean_circ: 0.928758
Ran for 327050 frames Cell Events: 7518 mean_circ: 0.928778
Ran for 327550 frames Cell Events: 7531 mean_circ: 0.928734
Ran for 328050 frames Cell Events: 7544 mean_circ: 0.928731
Ran for 328550 frames Cell Events: 7563 mean_circ: 0.928757
Ran for 329050 frames Cell Events: 7578 mean_circ: 0.92877
Ran for 329550 frames Cell Events: 7585 mean_circ: 0.928786
Ran for 330050 frames Cell Events: 7594 mean_circ: 0.92877
Ran for 331050 frames Cell Events: 7619 mean_circ: 0.928786
Ran for 332050 frames Cell Events: 7638 mean_circ: 0.928793
Ran for 332550 frames Cell Events: 7655 mean_circ: 0.928697
Ran for 333550 frames Cell Events: 7685 mean_circ: 0.928585
Ran for 334550 frames Cell Events: 7710 mean_circ: 0.928582
Ran for 335050 frames Cell Events: 7724 mean_circ: 0.92852
Ran for 335550 frames Cell Events: 7736 mean_circ: 0.928484
Ran for 336050 frames Cell Events: 7745 mean_circ: 0.92846
Ran for 336550 frames Cell Events: 7753 mean_circ: 0.92845
Ran for 337050 frames Cell Events: 7765 mean_circ: 0.92842
Ran for 337550 frames Cell Events: 7777 mean_circ: 0.928455
Ran for 338050 frames Cell Events: 7790 mean_circ: 0.928485
Ran for 338550 frames Cell Events: 7806 mean_circ: 0.92846
Ran for 339050 frames Cell Events: 7826 mean_circ: 0.928448
Ran for 340050 frames Cell Events: 7857 mean_circ: 0.928451
Ran for 341050 frames Cell Events: 7887 mean_circ: 0.928421
Ran for 342550 frames Cell Events: 7933 mean_circ: 0.928361
Ran for 344050 frames Cell Events: 7975 mean_circ: 0.928341
Ran for 344550 frames Cell Events: 7990 mean_circ: 0.928368
Ran for 345550 frames Cell Events: 8011 mean_circ: 0.928335
Ran for 346050 frames Cell Events: 8025 mean_circ: 0.928319
Ran for 347050 frames Cell Events: 8047 mean_circ: 0.928276
Ran for 347550 frames Cell Events: 8054 mean_circ: 0.928283
Ran for 348050 frames Cell Events: 8072 mean_circ: 0.928239
Ran for 349050 frames Cell Events: 8102 mean_circ: 0.928234
Ran for 350050 frames Cell Events: 8123 mean_circ: 0.928199
Ran for 350550 frames Cell Events: 8137 mean_circ: 0.928214
End this measurment..
Stopping time: 2.18718e+009
****************************************
Measurement finished
Mean Circularitiy: 0.928229
Mean Area: 706.187
Mean FL-1 intensity: 3553.81
Mean FL-2 intensity: 4948.64
Mean FL-3 intensity: 0
frames processed: 350710
Total Time: 175475ms
Number of Runs (new bg img) 0
Frames collected: 350831
Skipped frames: 44542
Rescued Frames: 4388292
Samples DAQ: 87707790
Samples written: 175415300
Samples per Channel: 87707650
FPS: 1999.32
Samples per second: 499830
Expected samples/s: 500000
Events: 8142
Events per second: 46.3998
jumped back (PMT): 26
#Frames read, frequency
# 0 frames :476323
# 1 frames :202222
# 2 frames :6410
# 3 frames :2809
# 4 frames :1819
# 5 frames :865
# 6 frames :1208
# 7 frames :1777
# 8 frames :1305
# 9 frames :1094
# 10 frames :1123
# 11 frames :1302
# 12 frames :1085
# 13 frames :635
# 14 frames :329
# 15 frames :218
# 16 frames :172
# 17 frames :148
# 18 frames :139
# 19 frames :116
# 20 frames :118
# 21 frames :92
# 22 frames :64
# 23 frames :46
# 24 frames :33
# 25 frames :23
# 26 frames :13
# 27 frames :14
# 28 frames :13
# 29 frames :7
# 30 frames :9
# 31 frames :2
# 32 frames :7
# 33 frames :11
# 34 frames :2
# 35 frames :3
# 36 frames :4
# 37 frames :3
# 38 frames :4
# 41 frames :1
# 42 frames :1
# 53 frames :1
# 68 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.8005
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0