Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_15.12.25
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "fad33e017df7b3daee4b0b50e7f2c5d2",
"name": "M1_20170609_1625_dsRNA_V7_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:12:48"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.8685
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.18895e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.941647
Ran for 550 frames Cell Events: 11 mean_circ: 0.953663
Ran for 1050 frames Cell Events: 19 mean_circ: 0.957766
Ran for 2050 frames Cell Events: 46 mean_circ: 0.942153
Ran for 2550 frames Cell Events: 55 mean_circ: 0.943233
Ran for 3050 frames Cell Events: 69 mean_circ: 0.941647
Ran for 3550 frames Cell Events: 79 mean_circ: 0.941392
Ran for 4550 frames Cell Events: 103 mean_circ: 0.943184
Ran for 5050 frames Cell Events: 114 mean_circ: 0.941906
Ran for 5550 frames Cell Events: 126 mean_circ: 0.940868
Ran for 6050 frames Cell Events: 136 mean_circ: 0.939382
Ran for 6550 frames Cell Events: 145 mean_circ: 0.938491
Ran for 7550 frames Cell Events: 163 mean_circ: 0.938418
Ran for 8050 frames Cell Events: 177 mean_circ: 0.936212
Ran for 8550 frames Cell Events: 189 mean_circ: 0.935807
Ran for 9550 frames Cell Events: 206 mean_circ: 0.936078
Ran for 10050 frames Cell Events: 215 mean_circ: 0.936402
Ran for 10550 frames Cell Events: 226 mean_circ: 0.936831
Ran for 13050 frames Cell Events: 300 mean_circ: 0.936605
Ran for 13550 frames Cell Events: 320 mean_circ: 0.937641
Ran for 14050 frames Cell Events: 333 mean_circ: 0.937036
Ran for 15050 frames Cell Events: 355 mean_circ: 0.937435
Ran for 16050 frames Cell Events: 385 mean_circ: 0.937364
Ran for 16550 frames Cell Events: 399 mean_circ: 0.93676
Ran for 17550 frames Cell Events: 433 mean_circ: 0.936898
Ran for 19050 frames Cell Events: 464 mean_circ: 0.936529
Ran for 19550 frames Cell Events: 475 mean_circ: 0.936591
Ran for 20050 frames Cell Events: 490 mean_circ: 0.936041
Ran for 21550 frames Cell Events: 527 mean_circ: 0.934748
Ran for 23050 frames Cell Events: 566 mean_circ: 0.934538
Ran for 24050 frames Cell Events: 592 mean_circ: 0.93412
Ran for 24550 frames Cell Events: 605 mean_circ: 0.934162
Ran for 27050 frames Cell Events: 688 mean_circ: 0.933828
Ran for 27550 frames Cell Events: 699 mean_circ: 0.934007
Ran for 28050 frames Cell Events: 712 mean_circ: 0.934059
Ran for 28550 frames Cell Events: 720 mean_circ: 0.933625
Ran for 30050 frames Cell Events: 769 mean_circ: 0.934122
Ran for 32550 frames Cell Events: 857 mean_circ: 0.9347
Ran for 33050 frames Cell Events: 880 mean_circ: 0.934675
Ran for 34050 frames Cell Events: 910 mean_circ: 0.934591
Ran for 35050 frames Cell Events: 932 mean_circ: 0.93488
Ran for 35550 frames Cell Events: 936 mean_circ: 0.934878
Ran for 36550 frames Cell Events: 953 mean_circ: 0.934919
Ran for 37050 frames Cell Events: 969 mean_circ: 0.93468
Ran for 37550 frames Cell Events: 981 mean_circ: 0.934925
Ran for 38550 frames Cell Events: 1012 mean_circ: 0.934749
Ran for 39050 frames Cell Events: 1027 mean_circ: 0.93474
Ran for 40050 frames Cell Events: 1052 mean_circ: 0.934528
Ran for 40550 frames Cell Events: 1062 mean_circ: 0.934653
Ran for 41050 frames Cell Events: 1078 mean_circ: 0.934714
Ran for 41550 frames Cell Events: 1095 mean_circ: 0.934516
Ran for 42050 frames Cell Events: 1108 mean_circ: 0.93444
Ran for 43050 frames Cell Events: 1148 mean_circ: 0.93467
Ran for 43550 frames Cell Events: 1156 mean_circ: 0.934825
Ran for 44050 frames Cell Events: 1171 mean_circ: 0.934926
Ran for 45050 frames Cell Events: 1204 mean_circ: 0.935152
Ran for 46550 frames Cell Events: 1254 mean_circ: 0.935325
Ran for 47550 frames Cell Events: 1301 mean_circ: 0.935447
Ran for 48550 frames Cell Events: 1331 mean_circ: 0.935203
Ran for 50050 frames Cell Events: 1369 mean_circ: 0.935468
Ran for 50550 frames Cell Events: 1389 mean_circ: 0.9352
Ran for 51550 frames Cell Events: 1413 mean_circ: 0.935423
Ran for 52050 frames Cell Events: 1425 mean_circ: 0.935436
Ran for 53050 frames Cell Events: 1455 mean_circ: 0.935505
Ran for 54050 frames Cell Events: 1479 mean_circ: 0.935277
Ran for 55050 frames Cell Events: 1502 mean_circ: 0.935171
Ran for 55550 frames Cell Events: 1510 mean_circ: 0.935163
Ran for 56550 frames Cell Events: 1542 mean_circ: 0.935157
Ran for 57050 frames Cell Events: 1551 mean_circ: 0.935172
Ran for 57550 frames Cell Events: 1559 mean_circ: 0.935146
Ran for 58050 frames Cell Events: 1575 mean_circ: 0.935259
Ran for 58550 frames Cell Events: 1588 mean_circ: 0.935282
Ran for 60050 frames Cell Events: 1638 mean_circ: 0.935602
Ran for 63050 frames Cell Events: 1714 mean_circ: 0.935628
Ran for 65550 frames Cell Events: 1790 mean_circ: 0.935384
Ran for 66550 frames Cell Events: 1826 mean_circ: 0.935337
Ran for 68550 frames Cell Events: 1889 mean_circ: 0.935293
Ran for 69050 frames Cell Events: 1901 mean_circ: 0.935387
Ran for 69550 frames Cell Events: 1912 mean_circ: 0.935386
Ran for 72550 frames Cell Events: 2022 mean_circ: 0.934981
Ran for 73550 frames Cell Events: 2059 mean_circ: 0.934878
Ran for 74050 frames Cell Events: 2069 mean_circ: 0.934899
Ran for 74550 frames Cell Events: 2082 mean_circ: 0.934955
Ran for 75550 frames Cell Events: 2113 mean_circ: 0.934969
Ran for 76050 frames Cell Events: 2131 mean_circ: 0.935004
Ran for 77050 frames Cell Events: 2157 mean_circ: 0.935075
Ran for 77550 frames Cell Events: 2174 mean_circ: 0.935025
Ran for 78550 frames Cell Events: 2204 mean_circ: 0.935189
Ran for 80050 frames Cell Events: 2249 mean_circ: 0.93525
Ran for 80550 frames Cell Events: 2258 mean_circ: 0.935214
Ran for 81050 frames Cell Events: 2279 mean_circ: 0.935243
Ran for 82550 frames Cell Events: 2328 mean_circ: 0.935216
Ran for 83050 frames Cell Events: 2335 mean_circ: 0.93522
Ran for 83550 frames Cell Events: 2347 mean_circ: 0.93519
Ran for 85050 frames Cell Events: 2402 mean_circ: 0.935153
Ran for 85550 frames Cell Events: 2427 mean_circ: 0.935027
Ran for 86050 frames Cell Events: 2438 mean_circ: 0.935019
Ran for 86550 frames Cell Events: 2451 mean_circ: 0.935094
Ran for 88050 frames Cell Events: 2512 mean_circ: 0.935028
Ran for 89050 frames Cell Events: 2539 mean_circ: 0.934806
Ran for 89550 frames Cell Events: 2548 mean_circ: 0.934753
Ran for 90550 frames Cell Events: 2581 mean_circ: 0.934641
Ran for 91050 frames Cell Events: 2597 mean_circ: 0.934455
Ran for 91550 frames Cell Events: 2610 mean_circ: 0.934377
Ran for 92050 frames Cell Events: 2617 mean_circ: 0.934256
Ran for 92550 frames Cell Events: 2626 mean_circ: 0.934208
Ran for 93050 frames Cell Events: 2642 mean_circ: 0.934206
Ran for 93550 frames Cell Events: 2661 mean_circ: 0.934123
Ran for 94050 frames Cell Events: 2669 mean_circ: 0.934143
Ran for 95050 frames Cell Events: 2703 mean_circ: 0.934195
Ran for 95550 frames Cell Events: 2720 mean_circ: 0.934195
Ran for 96050 frames Cell Events: 2729 mean_circ: 0.934139
Ran for 97550 frames Cell Events: 2793 mean_circ: 0.933987
Ran for 98050 frames Cell Events: 2809 mean_circ: 0.933958
Ran for 99050 frames Cell Events: 2834 mean_circ: 0.933952
Ran for 99550 frames Cell Events: 2848 mean_circ: 0.933839
Ran for 100550 frames Cell Events: 2882 mean_circ: 0.933875
Ran for 101050 frames Cell Events: 2900 mean_circ: 0.933976
Ran for 102050 frames Cell Events: 2949 mean_circ: 0.933863
Ran for 102550 frames Cell Events: 2964 mean_circ: 0.933748
Ran for 104050 frames Cell Events: 3026 mean_circ: 0.933598
Ran for 104550 frames Cell Events: 3040 mean_circ: 0.93346
Ran for 105050 frames Cell Events: 3061 mean_circ: 0.933503
Ran for 106050 frames Cell Events: 3115 mean_circ: 0.933423
Ran for 106550 frames Cell Events: 3133 mean_circ: 0.933474
Ran for 107050 frames Cell Events: 3150 mean_circ: 0.933455
Ran for 108050 frames Cell Events: 3176 mean_circ: 0.933406
Ran for 110050 frames Cell Events: 3267 mean_circ: 0.933561
Ran for 110550 frames Cell Events: 3279 mean_circ: 0.933543
Ran for 112050 frames Cell Events: 3324 mean_circ: 0.933551
Ran for 112550 frames Cell Events: 3332 mean_circ: 0.933497
Ran for 113050 frames Cell Events: 3349 mean_circ: 0.933429
Ran for 114050 frames Cell Events: 3371 mean_circ: 0.93329
Ran for 114550 frames Cell Events: 3382 mean_circ: 0.933348
Ran for 115050 frames Cell Events: 3397 mean_circ: 0.933335
Ran for 116550 frames Cell Events: 3431 mean_circ: 0.933404
Ran for 117050 frames Cell Events: 3451 mean_circ: 0.933453
Ran for 118550 frames Cell Events: 3496 mean_circ: 0.933505
Ran for 119050 frames Cell Events: 3507 mean_circ: 0.93347
Ran for 120550 frames Cell Events: 3546 mean_circ: 0.933483
Ran for 121050 frames Cell Events: 3555 mean_circ: 0.933486
Ran for 121550 frames Cell Events: 3579 mean_circ: 0.933536
Ran for 122050 frames Cell Events: 3586 mean_circ: 0.933551
Ran for 123050 frames Cell Events: 3622 mean_circ: 0.933464
Ran for 123550 frames Cell Events: 3641 mean_circ: 0.933391
Ran for 125550 frames Cell Events: 3712 mean_circ: 0.933412
Ran for 129050 frames Cell Events: 3823 mean_circ: 0.933331
Ran for 131550 frames Cell Events: 3909 mean_circ: 0.933327
Ran for 132050 frames Cell Events: 3931 mean_circ: 0.933211
Ran for 133050 frames Cell Events: 3964 mean_circ: 0.933177
Ran for 133550 frames Cell Events: 3983 mean_circ: 0.933126
Ran for 134550 frames Cell Events: 4012 mean_circ: 0.933126
Ran for 135050 frames Cell Events: 4036 mean_circ: 0.933158
Ran for 136550 frames Cell Events: 4078 mean_circ: 0.933086
Ran for 137550 frames Cell Events: 4124 mean_circ: 0.933173
Ran for 138550 frames Cell Events: 4146 mean_circ: 0.933209
Ran for 139050 frames Cell Events: 4161 mean_circ: 0.933241
Ran for 141050 frames Cell Events: 4236 mean_circ: 0.933219
Ran for 141550 frames Cell Events: 4261 mean_circ: 0.933242
Ran for 142050 frames Cell Events: 4273 mean_circ: 0.933235
Ran for 143050 frames Cell Events: 4308 mean_circ: 0.933292
Ran for 144050 frames Cell Events: 4341 mean_circ: 0.933231
Ran for 144550 frames Cell Events: 4358 mean_circ: 0.933263
Ran for 145550 frames Cell Events: 4384 mean_circ: 0.933274
Ran for 146550 frames Cell Events: 4419 mean_circ: 0.933284
Ran for 147550 frames Cell Events: 4447 mean_circ: 0.93333
Ran for 149550 frames Cell Events: 4516 mean_circ: 0.933296
Ran for 150050 frames Cell Events: 4531 mean_circ: 0.933325
Ran for 150550 frames Cell Events: 4546 mean_circ: 0.933308
Ran for 152550 frames Cell Events: 4592 mean_circ: 0.933329
Ran for 153050 frames Cell Events: 4604 mean_circ: 0.933326
Ran for 153550 frames Cell Events: 4615 mean_circ: 0.933266
Ran for 154050 frames Cell Events: 4637 mean_circ: 0.933178
Ran for 154550 frames Cell Events: 4654 mean_circ: 0.933232
Ran for 155050 frames Cell Events: 4668 mean_circ: 0.933261
Ran for 156550 frames Cell Events: 4703 mean_circ: 0.933173
Ran for 157050 frames Cell Events: 4720 mean_circ: 0.933122
Ran for 157550 frames Cell Events: 4739 mean_circ: 0.933141
Ran for 158550 frames Cell Events: 4769 mean_circ: 0.933127
Ran for 159050 frames Cell Events: 4783 mean_circ: 0.933113
Ran for 159550 frames Cell Events: 4791 mean_circ: 0.933106
Ran for 160550 frames Cell Events: 4828 mean_circ: 0.933154
Ran for 161050 frames Cell Events: 4838 mean_circ: 0.933214
Ran for 161550 frames Cell Events: 4857 mean_circ: 0.933213
Ran for 163050 frames Cell Events: 4903 mean_circ: 0.933266
Ran for 163550 frames Cell Events: 4928 mean_circ: 0.933266
Ran for 165550 frames Cell Events: 5009 mean_circ: 0.933228
Ran for 166050 frames Cell Events: 5032 mean_circ: 0.933277
Ran for 167050 frames Cell Events: 5068 mean_circ: 0.93326
Ran for 167550 frames Cell Events: 5080 mean_circ: 0.933244
Ran for 168050 frames Cell Events: 5105 mean_circ: 0.933278
Ran for 168550 frames Cell Events: 5113 mean_circ: 0.93327
Ran for 169050 frames Cell Events: 5131 mean_circ: 0.933241
Ran for 169550 frames Cell Events: 5140 mean_circ: 0.933232
Ran for 171550 frames Cell Events: 5214 mean_circ: 0.933206
Ran for 172550 frames Cell Events: 5254 mean_circ: 0.933234
Ran for 173050 frames Cell Events: 5272 mean_circ: 0.933272
Ran for 174050 frames Cell Events: 5300 mean_circ: 0.933353
Ran for 177050 frames Cell Events: 5394 mean_circ: 0.933265
Ran for 177550 frames Cell Events: 5408 mean_circ: 0.933319
Ran for 178050 frames Cell Events: 5419 mean_circ: 0.933337
Ran for 179050 frames Cell Events: 5459 mean_circ: 0.933377
Ran for 179550 frames Cell Events: 5484 mean_circ: 0.933379
Ran for 180050 frames Cell Events: 5502 mean_circ: 0.933332
Ran for 180550 frames Cell Events: 5510 mean_circ: 0.933349
Ran for 181050 frames Cell Events: 5522 mean_circ: 0.933354
Ran for 182550 frames Cell Events: 5565 mean_circ: 0.933381
Ran for 184050 frames Cell Events: 5603 mean_circ: 0.933439
Ran for 184550 frames Cell Events: 5614 mean_circ: 0.933422
Ran for 185050 frames Cell Events: 5626 mean_circ: 0.933418
Ran for 185550 frames Cell Events: 5640 mean_circ: 0.933457
Ran for 186050 frames Cell Events: 5655 mean_circ: 0.933447
Ran for 187550 frames Cell Events: 5706 mean_circ: 0.933417
Ran for 188050 frames Cell Events: 5722 mean_circ: 0.933374
Ran for 188550 frames Cell Events: 5742 mean_circ: 0.933382
Ran for 189050 frames Cell Events: 5751 mean_circ: 0.933356
Ran for 189550 frames Cell Events: 5762 mean_circ: 0.933338
Ran for 191550 frames Cell Events: 5832 mean_circ: 0.933266
Ran for 192050 frames Cell Events: 5843 mean_circ: 0.933271
Ran for 192550 frames Cell Events: 5862 mean_circ: 0.933257
Ran for 193050 frames Cell Events: 5870 mean_circ: 0.933281
Ran for 193550 frames Cell Events: 5885 mean_circ: 0.933275
Ran for 194050 frames Cell Events: 5893 mean_circ: 0.93325
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Ran for 196050 frames Cell Events: 5949 mean_circ: 0.933276
Ran for 197050 frames Cell Events: 5985 mean_circ: 0.933228
Ran for 198050 frames Cell Events: 6011 mean_circ: 0.93325
Ran for 199550 frames Cell Events: 6054 mean_circ: 0.933238
Ran for 200050 frames Cell Events: 6067 mean_circ: 0.93327
Ran for 201550 frames Cell Events: 6125 mean_circ: 0.933272
Ran for 202050 frames Cell Events: 6138 mean_circ: 0.933281
Ran for 203050 frames Cell Events: 6185 mean_circ: 0.933319
Ran for 203550 frames Cell Events: 6210 mean_circ: 0.933319
Ran for 204550 frames Cell Events: 6236 mean_circ: 0.933349
Ran for 206050 frames Cell Events: 6282 mean_circ: 0.933334
Ran for 206550 frames Cell Events: 6297 mean_circ: 0.933354
Ran for 209050 frames Cell Events: 6359 mean_circ: 0.933289
Ran for 209550 frames Cell Events: 6367 mean_circ: 0.933262
Ran for 210050 frames Cell Events: 6379 mean_circ: 0.933245
Ran for 211050 frames Cell Events: 6407 mean_circ: 0.933245
Ran for 211550 frames Cell Events: 6419 mean_circ: 0.933251
Ran for 212550 frames Cell Events: 6455 mean_circ: 0.933216
Ran for 213050 frames Cell Events: 6475 mean_circ: 0.933205
Ran for 214050 frames Cell Events: 6513 mean_circ: 0.933241
Ran for 214550 frames Cell Events: 6529 mean_circ: 0.933221
Ran for 215050 frames Cell Events: 6542 mean_circ: 0.933218
Ran for 216550 frames Cell Events: 6600 mean_circ: 0.933228
Ran for 217050 frames Cell Events: 6609 mean_circ: 0.933242
Ran for 217550 frames Cell Events: 6628 mean_circ: 0.933202
Ran for 218050 frames Cell Events: 6639 mean_circ: 0.933198
Ran for 218550 frames Cell Events: 6657 mean_circ: 0.933219
Ran for 221550 frames Cell Events: 6801 mean_circ: 0.93328
Ran for 222550 frames Cell Events: 6842 mean_circ: 0.933316
Ran for 223550 frames Cell Events: 6875 mean_circ: 0.933301
Ran for 224550 frames Cell Events: 6899 mean_circ: 0.933319
Ran for 225050 frames Cell Events: 6916 mean_circ: 0.933303
Ran for 225550 frames Cell Events: 6929 mean_circ: 0.933341
Ran for 226550 frames Cell Events: 6961 mean_circ: 0.93336
Ran for 227550 frames Cell Events: 6988 mean_circ: 0.933402
Ran for 228050 frames Cell Events: 6997 mean_circ: 0.933362
Ran for 230050 frames Cell Events: 7075 mean_circ: 0.933313
Ran for 231050 frames Cell Events: 7111 mean_circ: 0.933388
Ran for 232550 frames Cell Events: 7193 mean_circ: 0.933266
Ran for 234050 frames Cell Events: 7242 mean_circ: 0.933319
Ran for 237050 frames Cell Events: 7367 mean_circ: 0.933269
Ran for 237550 frames Cell Events: 7377 mean_circ: 0.933278
Ran for 238050 frames Cell Events: 7391 mean_circ: 0.933248
Ran for 238550 frames Cell Events: 7408 mean_circ: 0.933212
Ran for 239050 frames Cell Events: 7423 mean_circ: 0.933149
Ran for 239550 frames Cell Events: 7440 mean_circ: 0.933113
Ran for 240050 frames Cell Events: 7453 mean_circ: 0.933151
Ran for 240550 frames Cell Events: 7468 mean_circ: 0.933131
Ran for 241050 frames Cell Events: 7479 mean_circ: 0.933124
Ran for 241550 frames Cell Events: 7494 mean_circ: 0.933135
Ran for 244050 frames Cell Events: 7585 mean_circ: 0.933117
Ran for 244550 frames Cell Events: 7597 mean_circ: 0.933113
Ran for 245050 frames Cell Events: 7611 mean_circ: 0.933086
Ran for 245550 frames Cell Events: 7619 mean_circ: 0.933096
Ran for 246050 frames Cell Events: 7629 mean_circ: 0.93312
Ran for 246550 frames Cell Events: 7640 mean_circ: 0.933094
Ran for 247050 frames Cell Events: 7655 mean_circ: 0.933085
Ran for 247550 frames Cell Events: 7673 mean_circ: 0.933084
Ran for 248550 frames Cell Events: 7704 mean_circ: 0.933117
Ran for 249550 frames Cell Events: 7729 mean_circ: 0.933145
Ran for 251050 frames Cell Events: 7771 mean_circ: 0.933163
Ran for 251550 frames Cell Events: 7780 mean_circ: 0.933134
Ran for 252550 frames Cell Events: 7813 mean_circ: 0.933082
Ran for 253050 frames Cell Events: 7831 mean_circ: 0.933073
Ran for 253550 frames Cell Events: 7842 mean_circ: 0.933027
Ran for 254050 frames Cell Events: 7857 mean_circ: 0.932984
Ran for 255050 frames Cell Events: 7898 mean_circ: 0.932964
Ran for 255550 frames Cell Events: 7927 mean_circ: 0.932989
Ran for 256550 frames Cell Events: 7969 mean_circ: 0.933011
Ran for 257550 frames Cell Events: 7996 mean_circ: 0.932984
Ran for 258050 frames Cell Events: 8012 mean_circ: 0.932996
Ran for 259050 frames Cell Events: 8043 mean_circ: 0.93299
Ran for 260050 frames Cell Events: 8086 mean_circ: 0.932947
Ran for 260550 frames Cell Events: 8099 mean_circ: 0.932946
Ran for 261050 frames Cell Events: 8112 mean_circ: 0.932979
Ran for 261550 frames Cell Events: 8126 mean_circ: 0.932968
Ran for 262550 frames Cell Events: 8168 mean_circ: 0.932892
Ran for 263550 frames Cell Events: 8200 mean_circ: 0.932896
Ran for 264050 frames Cell Events: 8213 mean_circ: 0.932906
Ran for 264550 frames Cell Events: 8225 mean_circ: 0.932935
Ran for 265550 frames Cell Events: 8260 mean_circ: 0.932934
Ran for 266050 frames Cell Events: 8277 mean_circ: 0.932954
Ran for 267550 frames Cell Events: 8323 mean_circ: 0.932937
Ran for 268050 frames Cell Events: 8342 mean_circ: 0.932932
Ran for 269050 frames Cell Events: 8370 mean_circ: 0.932875
Ran for 269550 frames Cell Events: 8396 mean_circ: 0.932922
Ran for 270550 frames Cell Events: 8427 mean_circ: 0.932905
Ran for 271050 frames Cell Events: 8443 mean_circ: 0.932898
Ran for 271550 frames Cell Events: 8460 mean_circ: 0.93288
Ran for 272050 frames Cell Events: 8471 mean_circ: 0.932863
Ran for 272550 frames Cell Events: 8488 mean_circ: 0.93284
Ran for 273050 frames Cell Events: 8500 mean_circ: 0.932822
Ran for 273550 frames Cell Events: 8513 mean_circ: 0.932813
Ran for 274050 frames Cell Events: 8530 mean_circ: 0.932815
Ran for 274550 frames Cell Events: 8549 mean_circ: 0.932806
Ran for 275050 frames Cell Events: 8562 mean_circ: 0.932798
Ran for 275550 frames Cell Events: 8577 mean_circ: 0.932814
Ran for 276050 frames Cell Events: 8595 mean_circ: 0.932766
Ran for 276550 frames Cell Events: 8616 mean_circ: 0.932777
Ran for 277550 frames Cell Events: 8649 mean_circ: 0.932744
Ran for 278050 frames Cell Events: 8675 mean_circ: 0.932766
Ran for 279050 frames Cell Events: 8722 mean_circ: 0.93282
Ran for 279550 frames Cell Events: 8735 mean_circ: 0.932834
Ran for 280050 frames Cell Events: 8743 mean_circ: 0.932857
Ran for 280550 frames Cell Events: 8758 mean_circ: 0.932864
Ran for 281050 frames Cell Events: 8795 mean_circ: 0.932864
Ran for 282050 frames Cell Events: 8862 mean_circ: 0.932857
Ran for 282550 frames Cell Events: 8901 mean_circ: 0.932797
Ran for 283550 frames Cell Events: 8973 mean_circ: 0.93275
Ran for 284050 frames Cell Events: 9008 mean_circ: 0.932754
Ran for 286050 frames Cell Events: 9101 mean_circ: 0.932616
Ran for 287550 frames Cell Events: 9144 mean_circ: 0.932608
Ran for 288050 frames Cell Events: 9159 mean_circ: 0.932579
Ran for 288550 frames Cell Events: 9178 mean_circ: 0.932557
Ran for 289050 frames Cell Events: 9188 mean_circ: 0.932586
Ran for 289550 frames Cell Events: 9201 mean_circ: 0.932545
Ran for 290050 frames Cell Events: 9211 mean_circ: 0.932537
Ran for 290550 frames Cell Events: 9221 mean_circ: 0.93254
Ran for 291550 frames Cell Events: 9252 mean_circ: 0.932495
Ran for 292050 frames Cell Events: 9266 mean_circ: 0.932525
Ran for 292550 frames Cell Events: 9275 mean_circ: 0.932521
Ran for 293050 frames Cell Events: 9297 mean_circ: 0.932529
Ran for 293550 frames Cell Events: 9315 mean_circ: 0.932535
Ran for 294050 frames Cell Events: 9335 mean_circ: 0.932527
Ran for 294550 frames Cell Events: 9348 mean_circ: 0.932527
Ran for 295050 frames Cell Events: 9378 mean_circ: 0.932485
Ran for 295550 frames Cell Events: 9389 mean_circ: 0.932448
Ran for 296050 frames Cell Events: 9403 mean_circ: 0.932445
Ran for 297050 frames Cell Events: 9437 mean_circ: 0.93242
Ran for 297550 frames Cell Events: 9453 mean_circ: 0.932419
Ran for 298050 frames Cell Events: 9468 mean_circ: 0.932417
Ran for 299550 frames Cell Events: 9516 mean_circ: 0.932361
Ran for 300050 frames Cell Events: 9532 mean_circ: 0.932364
Ran for 301050 frames Cell Events: 9577 mean_circ: 0.93238
Ran for 301550 frames Cell Events: 9587 mean_circ: 0.932358
Ran for 302050 frames Cell Events: 9600 mean_circ: 0.93234
Ran for 302550 frames Cell Events: 9614 mean_circ: 0.932296
Ran for 303050 frames Cell Events: 9623 mean_circ: 0.932297
Ran for 305050 frames Cell Events: 9679 mean_circ: 0.932306
Ran for 305550 frames Cell Events: 9690 mean_circ: 0.932308
Ran for 306550 frames Cell Events: 9731 mean_circ: 0.932299
Ran for 307050 frames Cell Events: 9751 mean_circ: 0.932283
Ran for 308050 frames Cell Events: 9791 mean_circ: 0.93228
Ran for 309050 frames Cell Events: 9824 mean_circ: 0.932315
Ran for 309550 frames Cell Events: 9833 mean_circ: 0.932307
Ran for 310050 frames Cell Events: 9850 mean_circ: 0.932319
Ran for 311050 frames Cell Events: 9893 mean_circ: 0.932254
Ran for 311550 frames Cell Events: 9914 mean_circ: 0.932271
Ran for 313550 frames Cell Events: 9962 mean_circ: 0.932266
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 2.18911e+009
****************************************
Measurement finished
Mean Circularitiy: 0.932232
Mean Area: 678.694
Mean FL-1 intensity: 3759.98
Mean FL-2 intensity: 5354.12
Mean FL-3 intensity: 0
frames processed: 311830
Total Time: 157371ms
Number of Runs (new bg img) 0
Frames collected: 314573
Skipped frames: 52829
Rescued Frames: 4979311
Samples DAQ: 78643468
Samples written: 157286614
Samples per Channel: 78643307
FPS: 1998.93
Samples per second: 499732
Expected samples/s: 500000
Events: 10001
Events per second: 63.5505
jumped back (PMT): 22
#Frames read, frequency
# 0 frames :460509
# 1 frames :146742
# 2 frames :5161
# 3 frames :2449
# 4 frames :1277
# 5 frames :990
# 6 frames :1678
# 7 frames :1671
# 8 frames :1589
# 9 frames :1131
# 10 frames :835
# 11 frames :789
# 12 frames :700
# 13 frames :499
# 14 frames :418
# 15 frames :349
# 16 frames :288
# 17 frames :252
# 18 frames :227
# 19 frames :243
# 20 frames :201
# 21 frames :188
# 22 frames :143
# 23 frames :114
# 24 frames :84
# 25 frames :70
# 26 frames :54
# 27 frames :52
# 28 frames :43
# 29 frames :42
# 30 frames :20
# 31 frames :37
# 32 frames :25
# 33 frames :17
# 34 frames :13
# 35 frames :19
# 36 frames :16
# 37 frames :14
# 38 frames :16
# 39 frames :12
# 40 frames :11
# 41 frames :11
# 42 frames :8
# 43 frames :6
# 44 frames :5
# 45 frames :3
# 46 frames :4
# 47 frames :6
# 48 frames :6
# 49 frames :4
# 50 frames :4
# 51 frames :1
# 52 frames :4
# 53 frames :1
# 54 frames :1
# 55 frames :3
# 56 frames :1
# 59 frames :1
# 63 frames :2
# 65 frames :2
# 66 frames :1
# 67 frames :2
# 68 frames :2
# 69 frames :1
# 71 frames :1
# 76 frames :1
# 80 frames :1
# 85 frames :1
# 86 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.8685
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0