Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_15.14.42
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "9f60e6b34f49e47ce3d8d29419fb9bd6",
"name": "M1_20170609_1701_dsRNA_NK2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:15:04"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.9994
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.19112e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.916952
Ran for 550 frames Cell Events: 11 mean_circ: 0.939883
Ran for 1050 frames Cell Events: 22 mean_circ: 0.944214
Ran for 1550 frames Cell Events: 30 mean_circ: 0.944563
Ran for 2050 frames Cell Events: 37 mean_circ: 0.940504
Ran for 2550 frames Cell Events: 41 mean_circ: 0.942038
Ran for 3050 frames Cell Events: 60 mean_circ: 0.939926
Ran for 3550 frames Cell Events: 80 mean_circ: 0.932713
Ran for 4050 frames Cell Events: 90 mean_circ: 0.934232
Ran for 4550 frames Cell Events: 92 mean_circ: 0.936406
Ran for 5050 frames Cell Events: 99 mean_circ: 0.938091
Ran for 5550 frames Cell Events: 110 mean_circ: 0.93753
Ran for 6050 frames Cell Events: 116 mean_circ: 0.938044
Ran for 6550 frames Cell Events: 129 mean_circ: 0.939117
Ran for 7550 frames Cell Events: 154 mean_circ: 0.938505
Ran for 8050 frames Cell Events: 174 mean_circ: 0.938504
Ran for 8550 frames Cell Events: 199 mean_circ: 0.935328
Ran for 9050 frames Cell Events: 211 mean_circ: 0.936622
Ran for 9550 frames Cell Events: 236 mean_circ: 0.936893
Ran for 10050 frames Cell Events: 248 mean_circ: 0.936481
Ran for 10550 frames Cell Events: 271 mean_circ: 0.936471
Ran for 11050 frames Cell Events: 279 mean_circ: 0.936974
Ran for 12050 frames Cell Events: 305 mean_circ: 0.937401
Ran for 12550 frames Cell Events: 318 mean_circ: 0.93823
Ran for 13550 frames Cell Events: 346 mean_circ: 0.937934
Ran for 14550 frames Cell Events: 371 mean_circ: 0.938807
Ran for 15050 frames Cell Events: 377 mean_circ: 0.939031
Ran for 15550 frames Cell Events: 381 mean_circ: 0.938965
Ran for 16050 frames Cell Events: 393 mean_circ: 0.939346
Ran for 16550 frames Cell Events: 397 mean_circ: 0.939284
Ran for 17050 frames Cell Events: 408 mean_circ: 0.9394
Ran for 18050 frames Cell Events: 428 mean_circ: 0.939937
Ran for 18550 frames Cell Events: 442 mean_circ: 0.939894
Ran for 19050 frames Cell Events: 450 mean_circ: 0.939526
Ran for 19550 frames Cell Events: 465 mean_circ: 0.939629
Ran for 21050 frames Cell Events: 528 mean_circ: 0.938431
Ran for 22050 frames Cell Events: 561 mean_circ: 0.937627
Ran for 22550 frames Cell Events: 581 mean_circ: 0.937622
Ran for 23050 frames Cell Events: 592 mean_circ: 0.937617
Ran for 23550 frames Cell Events: 599 mean_circ: 0.937498
Ran for 24050 frames Cell Events: 608 mean_circ: 0.93783
Ran for 24550 frames Cell Events: 619 mean_circ: 0.938166
Ran for 25050 frames Cell Events: 631 mean_circ: 0.938116
Ran for 25550 frames Cell Events: 640 mean_circ: 0.938236
Ran for 26050 frames Cell Events: 651 mean_circ: 0.938317
Ran for 29050 frames Cell Events: 735 mean_circ: 0.937448
Ran for 30050 frames Cell Events: 772 mean_circ: 0.936918
Ran for 30550 frames Cell Events: 780 mean_circ: 0.936862
Ran for 31050 frames Cell Events: 790 mean_circ: 0.937216
Ran for 31550 frames Cell Events: 804 mean_circ: 0.93706
Ran for 32050 frames Cell Events: 820 mean_circ: 0.936795
Ran for 32550 frames Cell Events: 830 mean_circ: 0.936979
Ran for 33050 frames Cell Events: 834 mean_circ: 0.937114
Ran for 34550 frames Cell Events: 859 mean_circ: 0.93749
Ran for 35050 frames Cell Events: 872 mean_circ: 0.937685
Ran for 35550 frames Cell Events: 882 mean_circ: 0.937985
Ran for 36050 frames Cell Events: 894 mean_circ: 0.938304
Ran for 36550 frames Cell Events: 906 mean_circ: 0.938441
Ran for 37550 frames Cell Events: 928 mean_circ: 0.938574
Ran for 38050 frames Cell Events: 934 mean_circ: 0.938707
Ran for 38550 frames Cell Events: 942 mean_circ: 0.938635
Ran for 39050 frames Cell Events: 953 mean_circ: 0.938769
Ran for 39550 frames Cell Events: 960 mean_circ: 0.938818
Ran for 40050 frames Cell Events: 977 mean_circ: 0.939138
Ran for 40550 frames Cell Events: 987 mean_circ: 0.939205
Ran for 41050 frames Cell Events: 1000 mean_circ: 0.93927
Ran for 41550 frames Cell Events: 1022 mean_circ: 0.939005
Ran for 42050 frames Cell Events: 1031 mean_circ: 0.939137
Ran for 42550 frames Cell Events: 1040 mean_circ: 0.939347
Ran for 43050 frames Cell Events: 1052 mean_circ: 0.939292
Ran for 43550 frames Cell Events: 1066 mean_circ: 0.939245
Ran for 44050 frames Cell Events: 1075 mean_circ: 0.938854
Ran for 45050 frames Cell Events: 1098 mean_circ: 0.939078
Ran for 45550 frames Cell Events: 1116 mean_circ: 0.939203
Ran for 46550 frames Cell Events: 1150 mean_circ: 0.939486
Ran for 47050 frames Cell Events: 1161 mean_circ: 0.939317
Ran for 47550 frames Cell Events: 1184 mean_circ: 0.93928
Ran for 48550 frames Cell Events: 1197 mean_circ: 0.939154
Ran for 49050 frames Cell Events: 1206 mean_circ: 0.939279
Ran for 49550 frames Cell Events: 1213 mean_circ: 0.939354
Ran for 50550 frames Cell Events: 1247 mean_circ: 0.939209
Ran for 51050 frames Cell Events: 1256 mean_circ: 0.939229
Ran for 51550 frames Cell Events: 1263 mean_circ: 0.93928
Ran for 52050 frames Cell Events: 1269 mean_circ: 0.939264
Ran for 52550 frames Cell Events: 1277 mean_circ: 0.939204
Ran for 53050 frames Cell Events: 1285 mean_circ: 0.939323
Ran for 53550 frames Cell Events: 1289 mean_circ: 0.939335
Ran for 54550 frames Cell Events: 1312 mean_circ: 0.93903
Ran for 55050 frames Cell Events: 1330 mean_circ: 0.939213
Ran for 56050 frames Cell Events: 1363 mean_circ: 0.93942
Ran for 56550 frames Cell Events: 1376 mean_circ: 0.939285
Ran for 57050 frames Cell Events: 1390 mean_circ: 0.939357
Ran for 57550 frames Cell Events: 1398 mean_circ: 0.939335
Ran for 58050 frames Cell Events: 1406 mean_circ: 0.939429
Ran for 58550 frames Cell Events: 1427 mean_circ: 0.939347
Ran for 59550 frames Cell Events: 1471 mean_circ: 0.939478
Ran for 60050 frames Cell Events: 1496 mean_circ: 0.939193
Ran for 61050 frames Cell Events: 1538 mean_circ: 0.939271
Ran for 61550 frames Cell Events: 1549 mean_circ: 0.939324
Ran for 62550 frames Cell Events: 1572 mean_circ: 0.939271
Ran for 63050 frames Cell Events: 1582 mean_circ: 0.939226
Ran for 64550 frames Cell Events: 1615 mean_circ: 0.939226
Ran for 65050 frames Cell Events: 1628 mean_circ: 0.939274
Ran for 65550 frames Cell Events: 1646 mean_circ: 0.93906
Ran for 66550 frames Cell Events: 1672 mean_circ: 0.939003
Ran for 67550 frames Cell Events: 1709 mean_circ: 0.938924
Ran for 68050 frames Cell Events: 1726 mean_circ: 0.938929
Ran for 68550 frames Cell Events: 1733 mean_circ: 0.938963
Ran for 69550 frames Cell Events: 1760 mean_circ: 0.939032
Ran for 70050 frames Cell Events: 1771 mean_circ: 0.93897
Ran for 70550 frames Cell Events: 1791 mean_circ: 0.938818
Ran for 71550 frames Cell Events: 1820 mean_circ: 0.938836
Ran for 72050 frames Cell Events: 1834 mean_circ: 0.938818
Ran for 72550 frames Cell Events: 1844 mean_circ: 0.938843
Ran for 73550 frames Cell Events: 1868 mean_circ: 0.938931
Ran for 75050 frames Cell Events: 1905 mean_circ: 0.939177
Ran for 75550 frames Cell Events: 1914 mean_circ: 0.939245
Ran for 76050 frames Cell Events: 1923 mean_circ: 0.939256
Ran for 76550 frames Cell Events: 1930 mean_circ: 0.939298
Ran for 77550 frames Cell Events: 1957 mean_circ: 0.939332
Ran for 78050 frames Cell Events: 1972 mean_circ: 0.939242
Ran for 78550 frames Cell Events: 1992 mean_circ: 0.939308
Ran for 79550 frames Cell Events: 2024 mean_circ: 0.93928
Ran for 80050 frames Cell Events: 2035 mean_circ: 0.939446
Ran for 80550 frames Cell Events: 2058 mean_circ: 0.939564
Ran for 81550 frames Cell Events: 2076 mean_circ: 0.939641
Ran for 83050 frames Cell Events: 2104 mean_circ: 0.939646
Ran for 83550 frames Cell Events: 2119 mean_circ: 0.939632
Ran for 84050 frames Cell Events: 2141 mean_circ: 0.939614
Ran for 84550 frames Cell Events: 2166 mean_circ: 0.939618
Ran for 85050 frames Cell Events: 2186 mean_circ: 0.939529
Ran for 85550 frames Cell Events: 2197 mean_circ: 0.93952
Ran for 86050 frames Cell Events: 2212 mean_circ: 0.939538
Ran for 87050 frames Cell Events: 2238 mean_circ: 0.939498
Ran for 87550 frames Cell Events: 2246 mean_circ: 0.93958
Ran for 88550 frames Cell Events: 2276 mean_circ: 0.93963
Ran for 89050 frames Cell Events: 2289 mean_circ: 0.939453
Ran for 90550 frames Cell Events: 2331 mean_circ: 0.939168
Ran for 92050 frames Cell Events: 2365 mean_circ: 0.939083
Ran for 92550 frames Cell Events: 2375 mean_circ: 0.939052
Ran for 93550 frames Cell Events: 2394 mean_circ: 0.939117
Ran for 94550 frames Cell Events: 2416 mean_circ: 0.939165
Ran for 96050 frames Cell Events: 2470 mean_circ: 0.939261
Ran for 97050 frames Cell Events: 2506 mean_circ: 0.939153
Ran for 97550 frames Cell Events: 2518 mean_circ: 0.939148
Ran for 98050 frames Cell Events: 2527 mean_circ: 0.939169
Ran for 99550 frames Cell Events: 2576 mean_circ: 0.939197
Ran for 100050 frames Cell Events: 2592 mean_circ: 0.939273
Ran for 101050 frames Cell Events: 2616 mean_circ: 0.939451
Ran for 102050 frames Cell Events: 2637 mean_circ: 0.939446
Ran for 102550 frames Cell Events: 2646 mean_circ: 0.939484
Ran for 103050 frames Cell Events: 2666 mean_circ: 0.939483
Ran for 103550 frames Cell Events: 2677 mean_circ: 0.93951
Ran for 104050 frames Cell Events: 2684 mean_circ: 0.939534
Ran for 105050 frames Cell Events: 2711 mean_circ: 0.939542
Ran for 105550 frames Cell Events: 2719 mean_circ: 0.939574
Ran for 106550 frames Cell Events: 2756 mean_circ: 0.939688
Ran for 107550 frames Cell Events: 2801 mean_circ: 0.939636
Ran for 109550 frames Cell Events: 2858 mean_circ: 0.939421
Ran for 110050 frames Cell Events: 2867 mean_circ: 0.939315
Ran for 113050 frames Cell Events: 2939 mean_circ: 0.939291
Ran for 113550 frames Cell Events: 2959 mean_circ: 0.939205
Ran for 114050 frames Cell Events: 2976 mean_circ: 0.939214
Ran for 114550 frames Cell Events: 2986 mean_circ: 0.939175
Ran for 115050 frames Cell Events: 2998 mean_circ: 0.939163
Ran for 115550 frames Cell Events: 3019 mean_circ: 0.939045
Ran for 116550 frames Cell Events: 3048 mean_circ: 0.939097
Ran for 119050 frames Cell Events: 3127 mean_circ: 0.939092
Ran for 119550 frames Cell Events: 3141 mean_circ: 0.939125
Ran for 120050 frames Cell Events: 3156 mean_circ: 0.939022
Ran for 121050 frames Cell Events: 3193 mean_circ: 0.939073
Ran for 121550 frames Cell Events: 3207 mean_circ: 0.939106
Ran for 122550 frames Cell Events: 3229 mean_circ: 0.939074
Ran for 125050 frames Cell Events: 3304 mean_circ: 0.939182
Ran for 127050 frames Cell Events: 3344 mean_circ: 0.939265
Ran for 129050 frames Cell Events: 3404 mean_circ: 0.939358
Ran for 129550 frames Cell Events: 3419 mean_circ: 0.939415
Ran for 130550 frames Cell Events: 3448 mean_circ: 0.939417
Ran for 131050 frames Cell Events: 3459 mean_circ: 0.939427
Ran for 131550 frames Cell Events: 3475 mean_circ: 0.939269
Ran for 132550 frames Cell Events: 3509 mean_circ: 0.939135
Ran for 133050 frames Cell Events: 3522 mean_circ: 0.939178
Ran for 133550 frames Cell Events: 3533 mean_circ: 0.939213
Ran for 134050 frames Cell Events: 3548 mean_circ: 0.939257
Ran for 134550 frames Cell Events: 3564 mean_circ: 0.939282
Ran for 135050 frames Cell Events: 3571 mean_circ: 0.939323
Ran for 136050 frames Cell Events: 3605 mean_circ: 0.939403
Ran for 136550 frames Cell Events: 3618 mean_circ: 0.93934
Ran for 137050 frames Cell Events: 3635 mean_circ: 0.939319
Ran for 137550 frames Cell Events: 3644 mean_circ: 0.939319
Ran for 138050 frames Cell Events: 3658 mean_circ: 0.939292
Ran for 138550 frames Cell Events: 3668 mean_circ: 0.939275
Ran for 140050 frames Cell Events: 3720 mean_circ: 0.939292
Ran for 141050 frames Cell Events: 3734 mean_circ: 0.939311
Ran for 142050 frames Cell Events: 3758 mean_circ: 0.939326
Ran for 143050 frames Cell Events: 3783 mean_circ: 0.93923
Ran for 144050 frames Cell Events: 3816 mean_circ: 0.939196
Ran for 144550 frames Cell Events: 3828 mean_circ: 0.939153
Ran for 145050 frames Cell Events: 3851 mean_circ: 0.939188
Ran for 146050 frames Cell Events: 3872 mean_circ: 0.939159
Ran for 147050 frames Cell Events: 3898 mean_circ: 0.939176
Ran for 148550 frames Cell Events: 3938 mean_circ: 0.93928
Ran for 149050 frames Cell Events: 3947 mean_circ: 0.939351
Ran for 149550 frames Cell Events: 3964 mean_circ: 0.939386
Ran for 150050 frames Cell Events: 3975 mean_circ: 0.939411
Ran for 150550 frames Cell Events: 3989 mean_circ: 0.939422
Ran for 151050 frames Cell Events: 4002 mean_circ: 0.939454
Ran for 151550 frames Cell Events: 4013 mean_circ: 0.939486
Ran for 153050 frames Cell Events: 4047 mean_circ: 0.939464
Ran for 153550 frames Cell Events: 4054 mean_circ: 0.93949
Ran for 155550 frames Cell Events: 4105 mean_circ: 0.939584
Ran for 156050 frames Cell Events: 4116 mean_circ: 0.939624
Ran for 156550 frames Cell Events: 4127 mean_circ: 0.939636
Ran for 157050 frames Cell Events: 4139 mean_circ: 0.939685
Ran for 158050 frames Cell Events: 4167 mean_circ: 0.939583
Ran for 159550 frames Cell Events: 4196 mean_circ: 0.939699
Ran for 160050 frames Cell Events: 4207 mean_circ: 0.939699
Ran for 160550 frames Cell Events: 4226 mean_circ: 0.939677
Ran for 161050 frames Cell Events: 4234 mean_circ: 0.9397
Ran for 161550 frames Cell Events: 4250 mean_circ: 0.939714
Ran for 162050 frames Cell Events: 4264 mean_circ: 0.939749
Ran for 162550 frames Cell Events: 4275 mean_circ: 0.939784
Ran for 163050 frames Cell Events: 4284 mean_circ: 0.93974
Ran for 165550 frames Cell Events: 4345 mean_circ: 0.939724
Ran for 166050 frames Cell Events: 4358 mean_circ: 0.939703
Ran for 167050 frames Cell Events: 4385 mean_circ: 0.939597
Ran for 168050 frames Cell Events: 4410 mean_circ: 0.939666
Ran for 169050 frames Cell Events: 4440 mean_circ: 0.939655
Ran for 170050 frames Cell Events: 4466 mean_circ: 0.93972
Ran for 170550 frames Cell Events: 4485 mean_circ: 0.939744
Ran for 171050 frames Cell Events: 4498 mean_circ: 0.939736
Ran for 171550 frames Cell Events: 4510 mean_circ: 0.939765
Ran for 172050 frames Cell Events: 4517 mean_circ: 0.939769
Ran for 173050 frames Cell Events: 4533 mean_circ: 0.939826
Ran for 174050 frames Cell Events: 4570 mean_circ: 0.939777
Ran for 174550 frames Cell Events: 4580 mean_circ: 0.93982
Ran for 175050 frames Cell Events: 4591 mean_circ: 0.939881
Ran for 176550 frames Cell Events: 4632 mean_circ: 0.939894
Ran for 177550 frames Cell Events: 4655 mean_circ: 0.939885
Ran for 178050 frames Cell Events: 4673 mean_circ: 0.939926
Ran for 178550 frames Cell Events: 4689 mean_circ: 0.939845
Ran for 180050 frames Cell Events: 4745 mean_circ: 0.939938
Ran for 180550 frames Cell Events: 4755 mean_circ: 0.939925
Ran for 181050 frames Cell Events: 4767 mean_circ: 0.939911
Ran for 181550 frames Cell Events: 4783 mean_circ: 0.939914
Ran for 182550 frames Cell Events: 4810 mean_circ: 0.939975
Ran for 183050 frames Cell Events: 4820 mean_circ: 0.939919
Ran for 183550 frames Cell Events: 4840 mean_circ: 0.939879
Ran for 185050 frames Cell Events: 4875 mean_circ: 0.939856
Ran for 185550 frames Cell Events: 4889 mean_circ: 0.939875
Ran for 186050 frames Cell Events: 4898 mean_circ: 0.939879
Ran for 187050 frames Cell Events: 4918 mean_circ: 0.939861
Ran for 188050 frames Cell Events: 4969 mean_circ: 0.939848
Ran for 189050 frames Cell Events: 5008 mean_circ: 0.939757
Ran for 190050 frames Cell Events: 5036 mean_circ: 0.93966
Ran for 190550 frames Cell Events: 5059 mean_circ: 0.939642
Ran for 191550 frames Cell Events: 5111 mean_circ: 0.939498
Ran for 192550 frames Cell Events: 5143 mean_circ: 0.939515
Ran for 193050 frames Cell Events: 5157 mean_circ: 0.939498
Ran for 194050 frames Cell Events: 5191 mean_circ: 0.939537
Ran for 195050 frames Cell Events: 5210 mean_circ: 0.939567
Ran for 196050 frames Cell Events: 5249 mean_circ: 0.939639
Ran for 196550 frames Cell Events: 5256 mean_circ: 0.939663
Ran for 197550 frames Cell Events: 5291 mean_circ: 0.939765
Ran for 198050 frames Cell Events: 5307 mean_circ: 0.939776
Ran for 199050 frames Cell Events: 5319 mean_circ: 0.939821
Ran for 199550 frames Cell Events: 5331 mean_circ: 0.939834
Ran for 200050 frames Cell Events: 5347 mean_circ: 0.939851
Ran for 200550 frames Cell Events: 5365 mean_circ: 0.939864
Ran for 201050 frames Cell Events: 5376 mean_circ: 0.939882
Ran for 201550 frames Cell Events: 5391 mean_circ: 0.939821
Ran for 202050 frames Cell Events: 5396 mean_circ: 0.939832
Ran for 202550 frames Cell Events: 5411 mean_circ: 0.939851
Ran for 203550 frames Cell Events: 5440 mean_circ: 0.939881
Ran for 204050 frames Cell Events: 5452 mean_circ: 0.939872
Ran for 205550 frames Cell Events: 5497 mean_circ: 0.939956
Ran for 206050 frames Cell Events: 5516 mean_circ: 0.939917
Ran for 206550 frames Cell Events: 5531 mean_circ: 0.939869
Ran for 207550 frames Cell Events: 5572 mean_circ: 0.939981
Ran for 208550 frames Cell Events: 5599 mean_circ: 0.940011
Ran for 209050 frames Cell Events: 5611 mean_circ: 0.940034
Ran for 209550 frames Cell Events: 5623 mean_circ: 0.940089
Ran for 210050 frames Cell Events: 5635 mean_circ: 0.940117
Ran for 211050 frames Cell Events: 5672 mean_circ: 0.940039
Ran for 211550 frames Cell Events: 5682 mean_circ: 0.939994
Ran for 212550 frames Cell Events: 5712 mean_circ: 0.940054
Ran for 213050 frames Cell Events: 5724 mean_circ: 0.940086
Ran for 213550 frames Cell Events: 5736 mean_circ: 0.940089
Ran for 214050 frames Cell Events: 5752 mean_circ: 0.940133
Ran for 215050 frames Cell Events: 5781 mean_circ: 0.940191
Ran for 215550 frames Cell Events: 5798 mean_circ: 0.94022
Ran for 217050 frames Cell Events: 5847 mean_circ: 0.940321
Ran for 217550 frames Cell Events: 5865 mean_circ: 0.940382
Ran for 218050 frames Cell Events: 5881 mean_circ: 0.940376
Ran for 218550 frames Cell Events: 5892 mean_circ: 0.940403
Ran for 220050 frames Cell Events: 5924 mean_circ: 0.940461
Ran for 221050 frames Cell Events: 5953 mean_circ: 0.940476
Ran for 221550 frames Cell Events: 5966 mean_circ: 0.940495
Ran for 222550 frames Cell Events: 5997 mean_circ: 0.940495
Ran for 223050 frames Cell Events: 6011 mean_circ: 0.940514
Ran for 224050 frames Cell Events: 6056 mean_circ: 0.940456
Ran for 224550 frames Cell Events: 6069 mean_circ: 0.940465
Ran for 225550 frames Cell Events: 6104 mean_circ: 0.940505
Ran for 226050 frames Cell Events: 6116 mean_circ: 0.940543
Ran for 227050 frames Cell Events: 6143 mean_circ: 0.940576
Ran for 228050 frames Cell Events: 6172 mean_circ: 0.940646
Ran for 229050 frames Cell Events: 6204 mean_circ: 0.940619
Ran for 229550 frames Cell Events: 6214 mean_circ: 0.940633
Ran for 230050 frames Cell Events: 6230 mean_circ: 0.940673
Ran for 230550 frames Cell Events: 6246 mean_circ: 0.940701
Ran for 231550 frames Cell Events: 6274 mean_circ: 0.940681
Ran for 232550 frames Cell Events: 6299 mean_circ: 0.940697
Ran for 233550 frames Cell Events: 6324 mean_circ: 0.940735
Ran for 234050 frames Cell Events: 6337 mean_circ: 0.94072
Ran for 235050 frames Cell Events: 6373 mean_circ: 0.940756
Ran for 235550 frames Cell Events: 6388 mean_circ: 0.940784
Ran for 236050 frames Cell Events: 6401 mean_circ: 0.940794
Ran for 236550 frames Cell Events: 6413 mean_circ: 0.940823
Ran for 237050 frames Cell Events: 6429 mean_circ: 0.940864
Ran for 237550 frames Cell Events: 6443 mean_circ: 0.940903
Ran for 238050 frames Cell Events: 6463 mean_circ: 0.940924
Ran for 238550 frames Cell Events: 6478 mean_circ: 0.940959
Ran for 239050 frames Cell Events: 6487 mean_circ: 0.940975
Ran for 239550 frames Cell Events: 6493 mean_circ: 0.941008
Ran for 240050 frames Cell Events: 6511 mean_circ: 0.941004
Ran for 240550 frames Cell Events: 6527 mean_circ: 0.940986
Ran for 241550 frames Cell Events: 6560 mean_circ: 0.941019
Ran for 242050 frames Cell Events: 6577 mean_circ: 0.940998
Ran for 242550 frames Cell Events: 6599 mean_circ: 0.94093
Ran for 243550 frames Cell Events: 6632 mean_circ: 0.940952
Ran for 244050 frames Cell Events: 6645 mean_circ: 0.940982
Ran for 245050 frames Cell Events: 6685 mean_circ: 0.940946
Ran for 245550 frames Cell Events: 6693 mean_circ: 0.940969
Ran for 246550 frames Cell Events: 6717 mean_circ: 0.940909
Ran for 247550 frames Cell Events: 6738 mean_circ: 0.940942
Ran for 248050 frames Cell Events: 6751 mean_circ: 0.940955
Ran for 248550 frames Cell Events: 6763 mean_circ: 0.940978
Ran for 249050 frames Cell Events: 6775 mean_circ: 0.940977
Ran for 250550 frames Cell Events: 6811 mean_circ: 0.940923
Ran for 251050 frames Cell Events: 6829 mean_circ: 0.940917
Ran for 251550 frames Cell Events: 6844 mean_circ: 0.940866
Ran for 253550 frames Cell Events: 6909 mean_circ: 0.940892
Ran for 254050 frames Cell Events: 6926 mean_circ: 0.940888
Ran for 254550 frames Cell Events: 6939 mean_circ: 0.940915
Ran for 255050 frames Cell Events: 6954 mean_circ: 0.940936
Ran for 256050 frames Cell Events: 6980 mean_circ: 0.940896
Ran for 257050 frames Cell Events: 7009 mean_circ: 0.940905
Ran for 257550 frames Cell Events: 7023 mean_circ: 0.940934
Ran for 258050 frames Cell Events: 7039 mean_circ: 0.940935
Ran for 259050 frames Cell Events: 7065 mean_circ: 0.94088
Ran for 259550 frames Cell Events: 7098 mean_circ: 0.940862
Ran for 260050 frames Cell Events: 7110 mean_circ: 0.940876
Ran for 260550 frames Cell Events: 7120 mean_circ: 0.940894
Ran for 261050 frames Cell Events: 7131 mean_circ: 0.940879
Ran for 261550 frames Cell Events: 7137 mean_circ: 0.940875
Ran for 264050 frames Cell Events: 7207 mean_circ: 0.940922
Ran for 265050 frames Cell Events: 7257 mean_circ: 0.940966
Ran for 265550 frames Cell Events: 7269 mean_circ: 0.940934
Ran for 266050 frames Cell Events: 7298 mean_circ: 0.940899
Ran for 266550 frames Cell Events: 7310 mean_circ: 0.940929
Ran for 267050 frames Cell Events: 7329 mean_circ: 0.940931
Ran for 267550 frames Cell Events: 7349 mean_circ: 0.940859
Ran for 268550 frames Cell Events: 7378 mean_circ: 0.940878
Ran for 269550 frames Cell Events: 7427 mean_circ: 0.940809
Ran for 270050 frames Cell Events: 7437 mean_circ: 0.940826
Ran for 270550 frames Cell Events: 7461 mean_circ: 0.940775
Ran for 271050 frames Cell Events: 7486 mean_circ: 0.940739
Ran for 272050 frames Cell Events: 7520 mean_circ: 0.940763
Ran for 272550 frames Cell Events: 7530 mean_circ: 0.940741
Ran for 273050 frames Cell Events: 7540 mean_circ: 0.940771
Ran for 275550 frames Cell Events: 7614 mean_circ: 0.940744
Ran for 276050 frames Cell Events: 7629 mean_circ: 0.940755
Ran for 277050 frames Cell Events: 7663 mean_circ: 0.940725
Ran for 277550 frames Cell Events: 7678 mean_circ: 0.940742
Ran for 278050 frames Cell Events: 7698 mean_circ: 0.940775
Ran for 279550 frames Cell Events: 7747 mean_circ: 0.940805
Ran for 280050 frames Cell Events: 7756 mean_circ: 0.940801
Ran for 280550 frames Cell Events: 7769 mean_circ: 0.940779
Ran for 281050 frames Cell Events: 7784 mean_circ: 0.940798
Ran for 282550 frames Cell Events: 7828 mean_circ: 0.940778
Ran for 283050 frames Cell Events: 7847 mean_circ: 0.940789
Ran for 284050 frames Cell Events: 7880 mean_circ: 0.9408
Ran for 286050 frames Cell Events: 8008 mean_circ: 0.940615
Ran for 288050 frames Cell Events: 8088 mean_circ: 0.940684
Ran for 290050 frames Cell Events: 8152 mean_circ: 0.94071
Ran for 290550 frames Cell Events: 8166 mean_circ: 0.940735
Ran for 291050 frames Cell Events: 8189 mean_circ: 0.940727
Ran for 292550 frames Cell Events: 8238 mean_circ: 0.940777
Ran for 293050 frames Cell Events: 8252 mean_circ: 0.940809
Ran for 293550 frames Cell Events: 8262 mean_circ: 0.940821
Ran for 294050 frames Cell Events: 8281 mean_circ: 0.940831
Ran for 296050 frames Cell Events: 8330 mean_circ: 0.940835
Ran for 296550 frames Cell Events: 8345 mean_circ: 0.940856
Ran for 297050 frames Cell Events: 8355 mean_circ: 0.940839
Ran for 299050 frames Cell Events: 8434 mean_circ: 0.940861
Ran for 301050 frames Cell Events: 8508 mean_circ: 0.940877
Ran for 302050 frames Cell Events: 8536 mean_circ: 0.940846
Ran for 303050 frames Cell Events: 8573 mean_circ: 0.940809
Ran for 304050 frames Cell Events: 8602 mean_circ: 0.9408
Ran for 305050 frames Cell Events: 8623 mean_circ: 0.940812
Ran for 305550 frames Cell Events: 8641 mean_circ: 0.940801
Ran for 306050 frames Cell Events: 8655 mean_circ: 0.940814
Ran for 307050 frames Cell Events: 8683 mean_circ: 0.940818
Ran for 307550 frames Cell Events: 8692 mean_circ: 0.940828
Ran for 308050 frames Cell Events: 8707 mean_circ: 0.94084
Ran for 310550 frames Cell Events: 8804 mean_circ: 0.940938
Ran for 311550 frames Cell Events: 8829 mean_circ: 0.940981
End this measurment..
Stopping time: 2.19127e+009
****************************************
Measurement finished
Mean Circularitiy: 0.941004
Mean Area: 694.244
Mean FL-1 intensity: 3793.23
Mean FL-2 intensity: 5302.99
Mean FL-3 intensity: 0
frames processed: 310967
Total Time: 156142ms
Number of Runs (new bg img) 0
Frames collected: 312170
Skipped frames: 58882
Rescued Frames: 5584092
Samples DAQ: 78042481
Samples written: 156084780
Samples per Channel: 78042390
FPS: 1999.27
Samples per second: 499817
Expected samples/s: 500000
Events: 8855
Events per second: 56.7113
jumped back (PMT): 4571
#Frames read, frequency
# 0 frames :457599
# 1 frames :145351
# 2 frames :5001
# 3 frames :2627
# 4 frames :1452
# 5 frames :1018
# 6 frames :881
# 7 frames :1496
# 8 frames :1351
# 9 frames :1031
# 10 frames :1069
# 11 frames :910
# 12 frames :785
# 13 frames :534
# 14 frames :377
# 15 frames :321
# 16 frames :294
# 17 frames :291
# 18 frames :326
# 19 frames :279
# 20 frames :247
# 21 frames :212
# 22 frames :156
# 23 frames :116
# 24 frames :78
# 25 frames :74
# 26 frames :49
# 27 frames :47
# 28 frames :43
# 29 frames :32
# 30 frames :35
# 31 frames :33
# 32 frames :25
# 33 frames :19
# 34 frames :17
# 35 frames :17
# 36 frames :13
# 37 frames :10
# 38 frames :23
# 39 frames :12
# 40 frames :12
# 41 frames :6
# 42 frames :6
# 43 frames :4
# 44 frames :4
# 45 frames :5
# 46 frames :2
# 47 frames :4
# 48 frames :2
# 49 frames :4
# 50 frames :3
# 51 frames :4
# 52 frames :2
# 53 frames :1
# 54 frames :2
# 55 frames :1
# 56 frames :1
# 57 frames :2
# 58 frames :1
# 61 frames :2
# 65 frames :3
# 66 frames :1
# 68 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.9994
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0