Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_16.13.02
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "e95c0ddbdcefd38f2bf5e74e22e7ff8a",
"name": "M1_20170611_1646_dsRNA_O3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "14:13:22"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8078 (max 8079) in '8078'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9638
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.363e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 9 mean_circ: 0.961467
Ran for 2550 frames Cell Events: 54 mean_circ: 0.943176
Ran for 3050 frames Cell Events: 65 mean_circ: 0.944933
Ran for 5050 frames Cell Events: 126 mean_circ: 0.944933
Ran for 5550 frames Cell Events: 138 mean_circ: 0.945419
Ran for 6050 frames Cell Events: 155 mean_circ: 0.94591
Ran for 7050 frames Cell Events: 183 mean_circ: 0.948605
Ran for 8050 frames Cell Events: 214 mean_circ: 0.948952
Ran for 8550 frames Cell Events: 227 mean_circ: 0.949248
Ran for 9050 frames Cell Events: 232 mean_circ: 0.949408
Ran for 9550 frames Cell Events: 244 mean_circ: 0.947968
Ran for 10550 frames Cell Events: 261 mean_circ: 0.94879
Ran for 11050 frames Cell Events: 274 mean_circ: 0.947729
Ran for 11550 frames Cell Events: 292 mean_circ: 0.948044
Ran for 12550 frames Cell Events: 315 mean_circ: 0.948487
Ran for 13050 frames Cell Events: 322 mean_circ: 0.948272
Ran for 14050 frames Cell Events: 355 mean_circ: 0.948946
Ran for 15050 frames Cell Events: 381 mean_circ: 0.949145
Ran for 15550 frames Cell Events: 398 mean_circ: 0.949712
Ran for 16050 frames Cell Events: 404 mean_circ: 0.949586
Ran for 16550 frames Cell Events: 414 mean_circ: 0.94972
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Ran for 19050 frames Cell Events: 479 mean_circ: 0.9495
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Ran for 35050 frames Cell Events: 895 mean_circ: 0.948621
Ran for 35550 frames Cell Events: 902 mean_circ: 0.947913
Ran for 36050 frames Cell Events: 923 mean_circ: 0.947581
Ran for 37550 frames Cell Events: 958 mean_circ: 0.947432
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Ran for 39050 frames Cell Events: 997 mean_circ: 0.947596
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Ran for 42550 frames Cell Events: 1083 mean_circ: 0.947482
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Ran for 44050 frames Cell Events: 1119 mean_circ: 0.947175
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Ran for 45050 frames Cell Events: 1136 mean_circ: 0.947267
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Ran for 48050 frames Cell Events: 1212 mean_circ: 0.947226
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Ran for 51050 frames Cell Events: 1285 mean_circ: 0.947408
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Ran for 52550 frames Cell Events: 1321 mean_circ: 0.947044
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Ran for 63550 frames Cell Events: 1582 mean_circ: 0.947164
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Ran for 65050 frames Cell Events: 1622 mean_circ: 0.947261
Ran for 65550 frames Cell Events: 1632 mean_circ: 0.94727
Ran for 66550 frames Cell Events: 1654 mean_circ: 0.947375
Ran for 67050 frames Cell Events: 1672 mean_circ: 0.947413
Ran for 68050 frames Cell Events: 1689 mean_circ: 0.947182
Ran for 68550 frames Cell Events: 1699 mean_circ: 0.947276
Ran for 69050 frames Cell Events: 1711 mean_circ: 0.947246
Ran for 70050 frames Cell Events: 1734 mean_circ: 0.947046
Ran for 70550 frames Cell Events: 1748 mean_circ: 0.947101
Ran for 71050 frames Cell Events: 1757 mean_circ: 0.94716
Ran for 73050 frames Cell Events: 1795 mean_circ: 0.947289
Ran for 73550 frames Cell Events: 1801 mean_circ: 0.947226
Ran for 74050 frames Cell Events: 1816 mean_circ: 0.947296
Ran for 74550 frames Cell Events: 1833 mean_circ: 0.947228
Ran for 76050 frames Cell Events: 1885 mean_circ: 0.947163
Ran for 76550 frames Cell Events: 1902 mean_circ: 0.947291
Ran for 77050 frames Cell Events: 1914 mean_circ: 0.947348
Ran for 77550 frames Cell Events: 1925 mean_circ: 0.947385
Ran for 78050 frames Cell Events: 1938 mean_circ: 0.947436
Ran for 78550 frames Cell Events: 1949 mean_circ: 0.947453
Ran for 79050 frames Cell Events: 1962 mean_circ: 0.947352
Ran for 79550 frames Cell Events: 1969 mean_circ: 0.947334
Ran for 80050 frames Cell Events: 1983 mean_circ: 0.947318
Ran for 81050 frames Cell Events: 2013 mean_circ: 0.947389
Ran for 81550 frames Cell Events: 2026 mean_circ: 0.947425
Ran for 82050 frames Cell Events: 2038 mean_circ: 0.947449
Ran for 83550 frames Cell Events: 2079 mean_circ: 0.947447
Ran for 84050 frames Cell Events: 2093 mean_circ: 0.947495
Ran for 84550 frames Cell Events: 2103 mean_circ: 0.947439
Ran for 85050 frames Cell Events: 2113 mean_circ: 0.947521
Ran for 86050 frames Cell Events: 2148 mean_circ: 0.947467
Ran for 86550 frames Cell Events: 2160 mean_circ: 0.947482
Ran for 87550 frames Cell Events: 2185 mean_circ: 0.947386
Ran for 88050 frames Cell Events: 2195 mean_circ: 0.947435
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Ran for 89050 frames Cell Events: 2216 mean_circ: 0.947409
Ran for 89550 frames Cell Events: 2231 mean_circ: 0.947427
Ran for 90550 frames Cell Events: 2254 mean_circ: 0.947488
Ran for 91050 frames Cell Events: 2270 mean_circ: 0.947576
Ran for 92050 frames Cell Events: 2303 mean_circ: 0.947644
Ran for 92550 frames Cell Events: 2310 mean_circ: 0.947648
Ran for 93050 frames Cell Events: 2323 mean_circ: 0.947561
Ran for 93550 frames Cell Events: 2335 mean_circ: 0.947563
Ran for 94050 frames Cell Events: 2344 mean_circ: 0.947507
Ran for 95050 frames Cell Events: 2367 mean_circ: 0.947567
Ran for 95550 frames Cell Events: 2379 mean_circ: 0.947623
Ran for 96050 frames Cell Events: 2392 mean_circ: 0.947637
Ran for 97050 frames Cell Events: 2418 mean_circ: 0.947532
Ran for 98050 frames Cell Events: 2441 mean_circ: 0.947519
Ran for 99050 frames Cell Events: 2471 mean_circ: 0.947631
Ran for 99550 frames Cell Events: 2480 mean_circ: 0.947683
Ran for 100050 frames Cell Events: 2490 mean_circ: 0.947685
Ran for 100550 frames Cell Events: 2501 mean_circ: 0.947365
Ran for 101050 frames Cell Events: 2511 mean_circ: 0.947379
Ran for 102050 frames Cell Events: 2521 mean_circ: 0.947373
Ran for 102550 frames Cell Events: 2533 mean_circ: 0.947374
Ran for 103050 frames Cell Events: 2546 mean_circ: 0.947384
Ran for 103550 frames Cell Events: 2556 mean_circ: 0.94744
Ran for 105050 frames Cell Events: 2592 mean_circ: 0.947431
Ran for 105550 frames Cell Events: 2608 mean_circ: 0.947354
Ran for 107550 frames Cell Events: 2669 mean_circ: 0.947371
Ran for 108050 frames Cell Events: 2680 mean_circ: 0.94737
Ran for 108550 frames Cell Events: 2696 mean_circ: 0.947451
Ran for 110550 frames Cell Events: 2754 mean_circ: 0.947333
Ran for 111550 frames Cell Events: 2783 mean_circ: 0.947298
Ran for 112050 frames Cell Events: 2796 mean_circ: 0.947229
Ran for 112550 frames Cell Events: 2818 mean_circ: 0.947143
Ran for 113050 frames Cell Events: 2842 mean_circ: 0.947147
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Ran for 114550 frames Cell Events: 2876 mean_circ: 0.947106
Ran for 115050 frames Cell Events: 2885 mean_circ: 0.947087
Ran for 115550 frames Cell Events: 2896 mean_circ: 0.94707
Ran for 116050 frames Cell Events: 2917 mean_circ: 0.947017
Ran for 117050 frames Cell Events: 2956 mean_circ: 0.947072
Ran for 117550 frames Cell Events: 2977 mean_circ: 0.947094
Ran for 118050 frames Cell Events: 2997 mean_circ: 0.947083
Ran for 118550 frames Cell Events: 3014 mean_circ: 0.947146
Ran for 119050 frames Cell Events: 3021 mean_circ: 0.947142
Ran for 119550 frames Cell Events: 3031 mean_circ: 0.947173
Ran for 120050 frames Cell Events: 3043 mean_circ: 0.947159
Ran for 121050 frames Cell Events: 3080 mean_circ: 0.947176
Ran for 121550 frames Cell Events: 3094 mean_circ: 0.947138
Ran for 122050 frames Cell Events: 3104 mean_circ: 0.947155
Ran for 122550 frames Cell Events: 3115 mean_circ: 0.947159
Ran for 123550 frames Cell Events: 3136 mean_circ: 0.947146
Ran for 125050 frames Cell Events: 3189 mean_circ: 0.947224
Ran for 126050 frames Cell Events: 3224 mean_circ: 0.947182
Ran for 126550 frames Cell Events: 3241 mean_circ: 0.947188
Ran for 127050 frames Cell Events: 3264 mean_circ: 0.947129
Ran for 128550 frames Cell Events: 3302 mean_circ: 0.947158
Ran for 129550 frames Cell Events: 3339 mean_circ: 0.947207
Ran for 130050 frames Cell Events: 3354 mean_circ: 0.947222
Ran for 130550 frames Cell Events: 3366 mean_circ: 0.947221
Ran for 131050 frames Cell Events: 3375 mean_circ: 0.947218
Ran for 132050 frames Cell Events: 3390 mean_circ: 0.947186
Ran for 132550 frames Cell Events: 3416 mean_circ: 0.947154
Ran for 133050 frames Cell Events: 3430 mean_circ: 0.947205
Ran for 134050 frames Cell Events: 3450 mean_circ: 0.947167
Ran for 135050 frames Cell Events: 3483 mean_circ: 0.947295
Ran for 135550 frames Cell Events: 3501 mean_circ: 0.947311
Ran for 136050 frames Cell Events: 3522 mean_circ: 0.947223
Ran for 136550 frames Cell Events: 3526 mean_circ: 0.947226
Ran for 137050 frames Cell Events: 3535 mean_circ: 0.947244
Ran for 137550 frames Cell Events: 3545 mean_circ: 0.947256
Ran for 138050 frames Cell Events: 3554 mean_circ: 0.947162
Ran for 139050 frames Cell Events: 3582 mean_circ: 0.947279
Ran for 139550 frames Cell Events: 3590 mean_circ: 0.94725
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Ran for 140550 frames Cell Events: 3605 mean_circ: 0.947189
Ran for 141550 frames Cell Events: 3626 mean_circ: 0.947238
Ran for 144050 frames Cell Events: 3689 mean_circ: 0.947197
Ran for 144550 frames Cell Events: 3701 mean_circ: 0.94717
Ran for 145050 frames Cell Events: 3708 mean_circ: 0.947204
Ran for 145550 frames Cell Events: 3721 mean_circ: 0.947236
Ran for 146550 frames Cell Events: 3748 mean_circ: 0.947282
Ran for 147050 frames Cell Events: 3759 mean_circ: 0.947301
Ran for 147550 frames Cell Events: 3773 mean_circ: 0.947332
Ran for 148050 frames Cell Events: 3785 mean_circ: 0.947366
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Ran for 150050 frames Cell Events: 3851 mean_circ: 0.947427
Ran for 151050 frames Cell Events: 3883 mean_circ: 0.947458
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Ran for 152550 frames Cell Events: 3928 mean_circ: 0.947333
Ran for 153050 frames Cell Events: 3948 mean_circ: 0.947318
Ran for 153550 frames Cell Events: 3963 mean_circ: 0.947318
Ran for 154050 frames Cell Events: 3967 mean_circ: 0.947331
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Ran for 156550 frames Cell Events: 4036 mean_circ: 0.947265
Ran for 157050 frames Cell Events: 4050 mean_circ: 0.947278
Ran for 157550 frames Cell Events: 4072 mean_circ: 0.947274
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Ran for 163550 frames Cell Events: 4249 mean_circ: 0.947384
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Ran for 166550 frames Cell Events: 4322 mean_circ: 0.947404
Ran for 167550 frames Cell Events: 4358 mean_circ: 0.947473
Ran for 168050 frames Cell Events: 4370 mean_circ: 0.947472
Ran for 168550 frames Cell Events: 4382 mean_circ: 0.947422
Ran for 169050 frames Cell Events: 4400 mean_circ: 0.947438
Ran for 169550 frames Cell Events: 4415 mean_circ: 0.947402
Ran for 170550 frames Cell Events: 4456 mean_circ: 0.947201
Ran for 171050 frames Cell Events: 4472 mean_circ: 0.947228
Ran for 171550 frames Cell Events: 4483 mean_circ: 0.947259
Ran for 172550 frames Cell Events: 4513 mean_circ: 0.94729
Ran for 173050 frames Cell Events: 4523 mean_circ: 0.947294
Ran for 174550 frames Cell Events: 4559 mean_circ: 0.947222
Ran for 175050 frames Cell Events: 4571 mean_circ: 0.947247
Ran for 176050 frames Cell Events: 4600 mean_circ: 0.947255
Ran for 176550 frames Cell Events: 4613 mean_circ: 0.947318
Ran for 177050 frames Cell Events: 4625 mean_circ: 0.947303
Ran for 177550 frames Cell Events: 4641 mean_circ: 0.947354
Ran for 178050 frames Cell Events: 4655 mean_circ: 0.947387
Ran for 178550 frames Cell Events: 4662 mean_circ: 0.947398
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Ran for 181050 frames Cell Events: 4727 mean_circ: 0.947445
Ran for 182050 frames Cell Events: 4759 mean_circ: 0.947424
Ran for 183050 frames Cell Events: 4790 mean_circ: 0.947419
Ran for 183550 frames Cell Events: 4799 mean_circ: 0.947463
Ran for 184550 frames Cell Events: 4828 mean_circ: 0.947458
Ran for 185050 frames Cell Events: 4842 mean_circ: 0.947495
Ran for 186550 frames Cell Events: 4879 mean_circ: 0.947524
Ran for 187050 frames Cell Events: 4891 mean_circ: 0.947494
Ran for 187550 frames Cell Events: 4906 mean_circ: 0.947518
Ran for 188050 frames Cell Events: 4919 mean_circ: 0.947515
Ran for 188550 frames Cell Events: 4931 mean_circ: 0.947514
Ran for 189050 frames Cell Events: 4943 mean_circ: 0.947535
Ran for 191550 frames Cell Events: 5004 mean_circ: 0.947568
Ran for 192550 frames Cell Events: 5025 mean_circ: 0.947544
Ran for 193550 frames Cell Events: 5051 mean_circ: 0.947584
Ran for 194050 frames Cell Events: 5061 mean_circ: 0.947571
Ran for 194550 frames Cell Events: 5073 mean_circ: 0.947534
Ran for 195050 frames Cell Events: 5097 mean_circ: 0.947548
Ran for 196050 frames Cell Events: 5124 mean_circ: 0.947531
Ran for 196550 frames Cell Events: 5139 mean_circ: 0.947554
Ran for 197550 frames Cell Events: 5180 mean_circ: 0.947444
Ran for 198050 frames Cell Events: 5207 mean_circ: 0.947409
Ran for 198550 frames Cell Events: 5223 mean_circ: 0.947418
Ran for 200050 frames Cell Events: 5266 mean_circ: 0.947421
Ran for 201550 frames Cell Events: 5322 mean_circ: 0.947476
Ran for 202050 frames Cell Events: 5337 mean_circ: 0.947505
Ran for 202550 frames Cell Events: 5351 mean_circ: 0.947512
Ran for 203550 frames Cell Events: 5388 mean_circ: 0.947437
Ran for 204050 frames Cell Events: 5401 mean_circ: 0.947403
Ran for 204550 frames Cell Events: 5410 mean_circ: 0.94743
Ran for 205050 frames Cell Events: 5424 mean_circ: 0.947474
Ran for 206050 frames Cell Events: 5449 mean_circ: 0.947476
Ran for 207050 frames Cell Events: 5476 mean_circ: 0.947461
Ran for 207550 frames Cell Events: 5499 mean_circ: 0.947552
Ran for 208050 frames Cell Events: 5519 mean_circ: 0.947562
Ran for 208550 frames Cell Events: 5531 mean_circ: 0.947572
Ran for 209550 frames Cell Events: 5559 mean_circ: 0.947583
Ran for 210050 frames Cell Events: 5577 mean_circ: 0.947598
Ran for 210550 frames Cell Events: 5595 mean_circ: 0.947512
Ran for 211050 frames Cell Events: 5600 mean_circ: 0.947517
Ran for 212550 frames Cell Events: 5646 mean_circ: 0.947488
Ran for 213050 frames Cell Events: 5660 mean_circ: 0.947476
Ran for 213550 frames Cell Events: 5675 mean_circ: 0.947466
Ran for 214050 frames Cell Events: 5686 mean_circ: 0.947469
Ran for 214550 frames Cell Events: 5703 mean_circ: 0.94751
Ran for 215550 frames Cell Events: 5733 mean_circ: 0.947496
Ran for 216550 frames Cell Events: 5765 mean_circ: 0.947497
Ran for 217050 frames Cell Events: 5780 mean_circ: 0.947514
Ran for 217550 frames Cell Events: 5799 mean_circ: 0.947493
Ran for 218050 frames Cell Events: 5819 mean_circ: 0.947415
Ran for 218550 frames Cell Events: 5838 mean_circ: 0.947443
Ran for 219550 frames Cell Events: 5856 mean_circ: 0.947417
Ran for 221550 frames Cell Events: 5905 mean_circ: 0.947386
Ran for 222550 frames Cell Events: 5940 mean_circ: 0.947422
Ran for 223050 frames Cell Events: 5963 mean_circ: 0.947402
Ran for 223550 frames Cell Events: 5973 mean_circ: 0.947395
Ran for 224550 frames Cell Events: 6003 mean_circ: 0.94743
Ran for 225550 frames Cell Events: 6028 mean_circ: 0.94746
Ran for 226050 frames Cell Events: 6038 mean_circ: 0.947478
Ran for 226550 frames Cell Events: 6051 mean_circ: 0.947508
Ran for 227050 frames Cell Events: 6072 mean_circ: 0.947505
Ran for 228050 frames Cell Events: 6098 mean_circ: 0.947505
Ran for 228550 frames Cell Events: 6112 mean_circ: 0.947494
Ran for 229550 frames Cell Events: 6139 mean_circ: 0.947507
Ran for 230050 frames Cell Events: 6156 mean_circ: 0.947486
Ran for 230550 frames Cell Events: 6168 mean_circ: 0.947458
Ran for 231050 frames Cell Events: 6181 mean_circ: 0.947455
Ran for 231550 frames Cell Events: 6198 mean_circ: 0.947471
Ran for 232050 frames Cell Events: 6209 mean_circ: 0.947467
Ran for 232550 frames Cell Events: 6223 mean_circ: 0.947457
Ran for 233050 frames Cell Events: 6232 mean_circ: 0.947448
Ran for 233550 frames Cell Events: 6243 mean_circ: 0.947441
Ran for 234550 frames Cell Events: 6272 mean_circ: 0.947417
Ran for 235050 frames Cell Events: 6285 mean_circ: 0.947437
Ran for 235550 frames Cell Events: 6298 mean_circ: 0.94745
Ran for 236050 frames Cell Events: 6311 mean_circ: 0.947433
Ran for 236550 frames Cell Events: 6325 mean_circ: 0.94744
Ran for 237050 frames Cell Events: 6340 mean_circ: 0.94742
Ran for 237550 frames Cell Events: 6353 mean_circ: 0.947423
Ran for 238050 frames Cell Events: 6367 mean_circ: 0.947396
Ran for 239050 frames Cell Events: 6389 mean_circ: 0.94741
Ran for 240050 frames Cell Events: 6427 mean_circ: 0.947371
Ran for 241050 frames Cell Events: 6464 mean_circ: 0.947336
Ran for 242550 frames Cell Events: 6505 mean_circ: 0.947361
Ran for 243050 frames Cell Events: 6517 mean_circ: 0.947386
Ran for 243550 frames Cell Events: 6532 mean_circ: 0.947403
Ran for 244550 frames Cell Events: 6562 mean_circ: 0.947407
Ran for 245050 frames Cell Events: 6576 mean_circ: 0.947413
Ran for 245550 frames Cell Events: 6588 mean_circ: 0.947423
Ran for 246550 frames Cell Events: 6625 mean_circ: 0.94746
Ran for 247050 frames Cell Events: 6637 mean_circ: 0.947492
Ran for 248050 frames Cell Events: 6663 mean_circ: 0.947491
Ran for 248550 frames Cell Events: 6682 mean_circ: 0.947479
Ran for 249050 frames Cell Events: 6695 mean_circ: 0.947477
Ran for 250550 frames Cell Events: 6735 mean_circ: 0.947489
Ran for 251050 frames Cell Events: 6744 mean_circ: 0.947507
Ran for 252550 frames Cell Events: 6790 mean_circ: 0.947461
Ran for 253550 frames Cell Events: 6829 mean_circ: 0.94746
Ran for 254050 frames Cell Events: 6848 mean_circ: 0.947424
Ran for 254550 frames Cell Events: 6861 mean_circ: 0.947428
Ran for 256050 frames Cell Events: 6898 mean_circ: 0.947408
Ran for 256550 frames Cell Events: 6913 mean_circ: 0.947409
Ran for 257050 frames Cell Events: 6929 mean_circ: 0.947357
Ran for 259050 frames Cell Events: 6983 mean_circ: 0.947367
Ran for 259550 frames Cell Events: 6996 mean_circ: 0.947366
Ran for 260050 frames Cell Events: 7007 mean_circ: 0.947354
Ran for 261550 frames Cell Events: 7059 mean_circ: 0.947426
Ran for 262050 frames Cell Events: 7075 mean_circ: 0.947391
Ran for 262550 frames Cell Events: 7079 mean_circ: 0.947405
Ran for 263550 frames Cell Events: 7104 mean_circ: 0.947431
Ran for 264550 frames Cell Events: 7143 mean_circ: 0.947443
Ran for 266050 frames Cell Events: 7189 mean_circ: 0.947432
Ran for 266550 frames Cell Events: 7213 mean_circ: 0.947437
Ran for 267050 frames Cell Events: 7225 mean_circ: 0.947445
Ran for 267550 frames Cell Events: 7234 mean_circ: 0.94746
Ran for 268050 frames Cell Events: 7248 mean_circ: 0.947479
Ran for 269050 frames Cell Events: 7278 mean_circ: 0.947379
Ran for 269550 frames Cell Events: 7285 mean_circ: 0.947391
Ran for 270050 frames Cell Events: 7296 mean_circ: 0.947395
Ran for 271050 frames Cell Events: 7328 mean_circ: 0.947396
Ran for 272050 frames Cell Events: 7367 mean_circ: 0.94742
Ran for 272550 frames Cell Events: 7385 mean_circ: 0.947406
Ran for 273050 frames Cell Events: 7405 mean_circ: 0.947387
Ran for 275050 frames Cell Events: 7490 mean_circ: 0.947458
Ran for 275550 frames Cell Events: 7505 mean_circ: 0.947448
Ran for 277550 frames Cell Events: 7565 mean_circ: 0.947444
Ran for 278050 frames Cell Events: 7591 mean_circ: 0.947441
Ran for 279550 frames Cell Events: 7626 mean_circ: 0.947494
Ran for 280050 frames Cell Events: 7639 mean_circ: 0.947484
Ran for 281550 frames Cell Events: 7669 mean_circ: 0.947457
Ran for 282050 frames Cell Events: 7683 mean_circ: 0.94747
Ran for 282550 frames Cell Events: 7693 mean_circ: 0.947485
Ran for 283050 frames Cell Events: 7708 mean_circ: 0.947499
Ran for 283550 frames Cell Events: 7725 mean_circ: 0.947501
Ran for 284050 frames Cell Events: 7740 mean_circ: 0.947503
Ran for 284550 frames Cell Events: 7753 mean_circ: 0.947504
Ran for 285550 frames Cell Events: 7785 mean_circ: 0.947554
Ran for 286050 frames Cell Events: 7797 mean_circ: 0.947568
Ran for 286550 frames Cell Events: 7814 mean_circ: 0.947594
Ran for 287050 frames Cell Events: 7826 mean_circ: 0.947585
Ran for 287550 frames Cell Events: 7840 mean_circ: 0.947599
Ran for 288050 frames Cell Events: 7853 mean_circ: 0.947612
Ran for 289050 frames Cell Events: 7882 mean_circ: 0.947629
Ran for 289550 frames Cell Events: 7900 mean_circ: 0.947603
Ran for 291050 frames Cell Events: 7939 mean_circ: 0.94757
Ran for 291550 frames Cell Events: 7949 mean_circ: 0.947579
Ran for 292050 frames Cell Events: 7967 mean_circ: 0.947594
Ran for 293050 frames Cell Events: 8011 mean_circ: 0.947638
Ran for 293550 frames Cell Events: 8024 mean_circ: 0.947654
Ran for 294050 frames Cell Events: 8035 mean_circ: 0.947658
Ran for 295050 frames Cell Events: 8061 mean_circ: 0.947677
End this measurment..
Stopping time: 2.36315e+009
****************************************
Measurement finished
Mean Circularitiy: 0.947685
Mean Area: 649.888
Mean FL-1 intensity: 3598.06
Mean FL-2 intensity: 3988.4
Mean FL-3 intensity: 0
frames processed: 294389
Total Time: 148009ms
Number of Runs (new bg img) 0
Frames collected: 295856
Skipped frames: 44547
Rescued Frames: 3694528
Samples DAQ: 73963981
Samples written: 147927814
Samples per Channel: 73963907
FPS: 1998.91
Samples per second: 499727
Expected samples/s: 500000
Events: 8079
Events per second: 54.5846
jumped back (PMT): 4906
#Frames read, frequency
# 0 frames :424267
# 1 frames :147152
# 2 frames :5161
# 3 frames :2326
# 4 frames :1492
# 5 frames :826
# 6 frames :942
# 7 frames :1682
# 8 frames :1333
# 9 frames :908
# 10 frames :954
# 11 frames :751
# 12 frames :703
# 13 frames :475
# 14 frames :461
# 15 frames :352
# 16 frames :305
# 17 frames :286
# 18 frames :274
# 19 frames :194
# 20 frames :131
# 21 frames :112
# 22 frames :100
# 23 frames :55
# 24 frames :62
# 25 frames :41
# 26 frames :50
# 27 frames :53
# 28 frames :44
# 29 frames :37
# 30 frames :29
# 31 frames :26
# 32 frames :16
# 33 frames :13
# 34 frames :8
# 35 frames :3
# 36 frames :5
# 37 frames :8
# 38 frames :2
# 39 frames :6
# 40 frames :5
# 41 frames :3
# 42 frames :6
# 43 frames :5
# 45 frames :3
# 46 frames :2
# 47 frames :3
# 48 frames :1
# 49 frames :1
# 50 frames :1
# 51 frames :1
# 52 frames :1
# 53 frames :1
# 54 frames :1
# 55 frames :1
# 56 frames :1
# 80 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9638
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0