Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_16.18.40
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "896849501f9dd7e1f04ec6874ab0c4f1",
"name": "M1_20170611_1803_dsRNA_P3_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "14:19:00"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.0943
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.36763e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.947068
Ran for 550 frames Cell Events: 16 mean_circ: 0.914165
Ran for 1050 frames Cell Events: 29 mean_circ: 0.942355
Ran for 3050 frames Cell Events: 91 mean_circ: 0.938227
Ran for 4550 frames Cell Events: 133 mean_circ: 0.936486
Ran for 5050 frames Cell Events: 149 mean_circ: 0.937113
Ran for 5550 frames Cell Events: 160 mean_circ: 0.938231
Ran for 7050 frames Cell Events: 207 mean_circ: 0.935779
Ran for 7550 frames Cell Events: 220 mean_circ: 0.936448
Ran for 8550 frames Cell Events: 250 mean_circ: 0.93671
Ran for 9550 frames Cell Events: 280 mean_circ: 0.937369
Ran for 10050 frames Cell Events: 296 mean_circ: 0.937053
Ran for 11050 frames Cell Events: 335 mean_circ: 0.936834
Ran for 13050 frames Cell Events: 401 mean_circ: 0.936586
Ran for 13550 frames Cell Events: 416 mean_circ: 0.936205
Ran for 14050 frames Cell Events: 439 mean_circ: 0.935808
Ran for 17050 frames Cell Events: 571 mean_circ: 0.935921
Ran for 18050 frames Cell Events: 604 mean_circ: 0.936121
Ran for 18550 frames Cell Events: 621 mean_circ: 0.936093
Ran for 20050 frames Cell Events: 689 mean_circ: 0.935625
Ran for 20550 frames Cell Events: 703 mean_circ: 0.935518
Ran for 21050 frames Cell Events: 721 mean_circ: 0.935259
Ran for 21550 frames Cell Events: 746 mean_circ: 0.935629
Ran for 22050 frames Cell Events: 766 mean_circ: 0.935466
Ran for 23050 frames Cell Events: 808 mean_circ: 0.935404
Ran for 23550 frames Cell Events: 838 mean_circ: 0.935554
Ran for 24050 frames Cell Events: 859 mean_circ: 0.93568
Ran for 24550 frames Cell Events: 876 mean_circ: 0.935536
Ran for 25550 frames Cell Events: 917 mean_circ: 0.935804
Ran for 26050 frames Cell Events: 937 mean_circ: 0.93596
Ran for 27550 frames Cell Events: 995 mean_circ: 0.935612
Ran for 28050 frames Cell Events: 1014 mean_circ: 0.935439
Ran for 28550 frames Cell Events: 1040 mean_circ: 0.935824
Ran for 29550 frames Cell Events: 1075 mean_circ: 0.935601
Ran for 30050 frames Cell Events: 1092 mean_circ: 0.935212
Ran for 30550 frames Cell Events: 1113 mean_circ: 0.9353
Ran for 31050 frames Cell Events: 1129 mean_circ: 0.935103
Ran for 31550 frames Cell Events: 1142 mean_circ: 0.934767
Ran for 32050 frames Cell Events: 1158 mean_circ: 0.9347
Ran for 32550 frames Cell Events: 1170 mean_circ: 0.934609
Ran for 33050 frames Cell Events: 1192 mean_circ: 0.934665
Ran for 33550 frames Cell Events: 1214 mean_circ: 0.934844
Ran for 34050 frames Cell Events: 1223 mean_circ: 0.934954
Ran for 34550 frames Cell Events: 1239 mean_circ: 0.934743
Ran for 35050 frames Cell Events: 1250 mean_circ: 0.93462
Ran for 35550 frames Cell Events: 1273 mean_circ: 0.934469
Ran for 37050 frames Cell Events: 1326 mean_circ: 0.934491
Ran for 38050 frames Cell Events: 1356 mean_circ: 0.934717
Ran for 39050 frames Cell Events: 1393 mean_circ: 0.934497
Ran for 39550 frames Cell Events: 1410 mean_circ: 0.934642
Ran for 40050 frames Cell Events: 1417 mean_circ: 0.934691
Ran for 40550 frames Cell Events: 1433 mean_circ: 0.934749
Ran for 42550 frames Cell Events: 1492 mean_circ: 0.934653
Ran for 43050 frames Cell Events: 1510 mean_circ: 0.934454
Ran for 43550 frames Cell Events: 1526 mean_circ: 0.934263
Ran for 44050 frames Cell Events: 1542 mean_circ: 0.934248
Ran for 44550 frames Cell Events: 1556 mean_circ: 0.93425
Ran for 45050 frames Cell Events: 1574 mean_circ: 0.934377
Ran for 45550 frames Cell Events: 1586 mean_circ: 0.934411
Ran for 46050 frames Cell Events: 1596 mean_circ: 0.934546
Ran for 46550 frames Cell Events: 1610 mean_circ: 0.934656
Ran for 47050 frames Cell Events: 1624 mean_circ: 0.934737
Ran for 48050 frames Cell Events: 1656 mean_circ: 0.934665
Ran for 49050 frames Cell Events: 1692 mean_circ: 0.934667
Ran for 49550 frames Cell Events: 1708 mean_circ: 0.934561
Ran for 50050 frames Cell Events: 1732 mean_circ: 0.9346
Ran for 50550 frames Cell Events: 1749 mean_circ: 0.934612
Ran for 51050 frames Cell Events: 1763 mean_circ: 0.934577
Ran for 53050 frames Cell Events: 1825 mean_circ: 0.934634
Ran for 54050 frames Cell Events: 1867 mean_circ: 0.934641
Ran for 55050 frames Cell Events: 1898 mean_circ: 0.934495
Ran for 55550 frames Cell Events: 1918 mean_circ: 0.934583
Ran for 56550 frames Cell Events: 1943 mean_circ: 0.934718
Ran for 57050 frames Cell Events: 1961 mean_circ: 0.934642
Ran for 57550 frames Cell Events: 1974 mean_circ: 0.934682
Ran for 58050 frames Cell Events: 1983 mean_circ: 0.934723
Ran for 58550 frames Cell Events: 2001 mean_circ: 0.93476
Ran for 59550 frames Cell Events: 2039 mean_circ: 0.934833
Ran for 60050 frames Cell Events: 2069 mean_circ: 0.934765
Ran for 60550 frames Cell Events: 2097 mean_circ: 0.934622
Ran for 61050 frames Cell Events: 2107 mean_circ: 0.934686
Ran for 62550 frames Cell Events: 2158 mean_circ: 0.934813
Ran for 63050 frames Cell Events: 2172 mean_circ: 0.934908
Ran for 64550 frames Cell Events: 2214 mean_circ: 0.934973
Ran for 65050 frames Cell Events: 2245 mean_circ: 0.934853
Ran for 65550 frames Cell Events: 2271 mean_circ: 0.934949
Ran for 66050 frames Cell Events: 2285 mean_circ: 0.934894
Ran for 67550 frames Cell Events: 2341 mean_circ: 0.935042
Ran for 68050 frames Cell Events: 2356 mean_circ: 0.935095
Ran for 68550 frames Cell Events: 2372 mean_circ: 0.93513
Ran for 69550 frames Cell Events: 2407 mean_circ: 0.935097
Ran for 70050 frames Cell Events: 2424 mean_circ: 0.935025
Ran for 70550 frames Cell Events: 2439 mean_circ: 0.935087
Ran for 71550 frames Cell Events: 2481 mean_circ: 0.935049
Ran for 72050 frames Cell Events: 2500 mean_circ: 0.93499
Ran for 72550 frames Cell Events: 2523 mean_circ: 0.935007
Ran for 73050 frames Cell Events: 2536 mean_circ: 0.935066
Ran for 73550 frames Cell Events: 2549 mean_circ: 0.935148
Ran for 74050 frames Cell Events: 2573 mean_circ: 0.935167
Ran for 75050 frames Cell Events: 2620 mean_circ: 0.935152
Ran for 75550 frames Cell Events: 2641 mean_circ: 0.935109
Ran for 76050 frames Cell Events: 2658 mean_circ: 0.935146
Ran for 76550 frames Cell Events: 2672 mean_circ: 0.935079
Ran for 77050 frames Cell Events: 2693 mean_circ: 0.935071
Ran for 77550 frames Cell Events: 2720 mean_circ: 0.93487
Ran for 78050 frames Cell Events: 2744 mean_circ: 0.934829
Ran for 78550 frames Cell Events: 2758 mean_circ: 0.93488
Ran for 81050 frames Cell Events: 2873 mean_circ: 0.934849
Ran for 82550 frames Cell Events: 2947 mean_circ: 0.934827
Ran for 83050 frames Cell Events: 2969 mean_circ: 0.934903
Ran for 83550 frames Cell Events: 2990 mean_circ: 0.934816
Ran for 84050 frames Cell Events: 3009 mean_circ: 0.934919
Ran for 85550 frames Cell Events: 3075 mean_circ: 0.934871
Ran for 86050 frames Cell Events: 3094 mean_circ: 0.934864
Ran for 87050 frames Cell Events: 3133 mean_circ: 0.934827
Ran for 87550 frames Cell Events: 3152 mean_circ: 0.93484
Ran for 88050 frames Cell Events: 3161 mean_circ: 0.934703
Ran for 88550 frames Cell Events: 3175 mean_circ: 0.934681
Ran for 89050 frames Cell Events: 3195 mean_circ: 0.934634
Ran for 90550 frames Cell Events: 3254 mean_circ: 0.93446
Ran for 91050 frames Cell Events: 3273 mean_circ: 0.934429
Ran for 91550 frames Cell Events: 3289 mean_circ: 0.934488
Ran for 92050 frames Cell Events: 3312 mean_circ: 0.934533
Ran for 92550 frames Cell Events: 3335 mean_circ: 0.934521
Ran for 93550 frames Cell Events: 3390 mean_circ: 0.934657
Ran for 94550 frames Cell Events: 3435 mean_circ: 0.934697
Ran for 95050 frames Cell Events: 3455 mean_circ: 0.934716
Ran for 95550 frames Cell Events: 3472 mean_circ: 0.934724
Ran for 96050 frames Cell Events: 3486 mean_circ: 0.934796
Ran for 96550 frames Cell Events: 3501 mean_circ: 0.934771
Ran for 97550 frames Cell Events: 3542 mean_circ: 0.934735
Ran for 98050 frames Cell Events: 3554 mean_circ: 0.934745
Ran for 99050 frames Cell Events: 3594 mean_circ: 0.93479
Ran for 101050 frames Cell Events: 3670 mean_circ: 0.934851
Ran for 103050 frames Cell Events: 3744 mean_circ: 0.934899
Ran for 104550 frames Cell Events: 3791 mean_circ: 0.934877
Ran for 105050 frames Cell Events: 3806 mean_circ: 0.93488
Ran for 105550 frames Cell Events: 3826 mean_circ: 0.934873
Ran for 106050 frames Cell Events: 3847 mean_circ: 0.934873
Ran for 107550 frames Cell Events: 3907 mean_circ: 0.934875
Ran for 108550 frames Cell Events: 3948 mean_circ: 0.934937
Ran for 109050 frames Cell Events: 3969 mean_circ: 0.934872
Ran for 109550 frames Cell Events: 3989 mean_circ: 0.934924
Ran for 110050 frames Cell Events: 4004 mean_circ: 0.934915
Ran for 111550 frames Cell Events: 4066 mean_circ: 0.934932
Ran for 112050 frames Cell Events: 4080 mean_circ: 0.934976
Ran for 112550 frames Cell Events: 4113 mean_circ: 0.934886
Ran for 114050 frames Cell Events: 4168 mean_circ: 0.93493
Ran for 114550 frames Cell Events: 4186 mean_circ: 0.934955
Ran for 115050 frames Cell Events: 4210 mean_circ: 0.935059
Ran for 116050 frames Cell Events: 4243 mean_circ: 0.935043
Ran for 116550 frames Cell Events: 4261 mean_circ: 0.935099
Ran for 117050 frames Cell Events: 4282 mean_circ: 0.935076
Ran for 117550 frames Cell Events: 4305 mean_circ: 0.935089
Ran for 118050 frames Cell Events: 4325 mean_circ: 0.935044
Ran for 119050 frames Cell Events: 4361 mean_circ: 0.935044
Ran for 119550 frames Cell Events: 4382 mean_circ: 0.935048
Ran for 120050 frames Cell Events: 4401 mean_circ: 0.935062
Ran for 121050 frames Cell Events: 4442 mean_circ: 0.935011
Ran for 122050 frames Cell Events: 4488 mean_circ: 0.935049
Ran for 122550 frames Cell Events: 4505 mean_circ: 0.935039
Ran for 123050 frames Cell Events: 4520 mean_circ: 0.935016
Ran for 123550 frames Cell Events: 4539 mean_circ: 0.934984
Ran for 124050 frames Cell Events: 4557 mean_circ: 0.934935
Ran for 124550 frames Cell Events: 4570 mean_circ: 0.934925
Ran for 125050 frames Cell Events: 4589 mean_circ: 0.934931
Ran for 125550 frames Cell Events: 4607 mean_circ: 0.934888
Ran for 126050 frames Cell Events: 4615 mean_circ: 0.934882
Ran for 127550 frames Cell Events: 4686 mean_circ: 0.934849
Ran for 128550 frames Cell Events: 4720 mean_circ: 0.934888
Ran for 129550 frames Cell Events: 4752 mean_circ: 0.93493
Ran for 131550 frames Cell Events: 4830 mean_circ: 0.935011
Ran for 132550 frames Cell Events: 4862 mean_circ: 0.934938
Ran for 133550 frames Cell Events: 4895 mean_circ: 0.934932
Ran for 134050 frames Cell Events: 4926 mean_circ: 0.934917
Ran for 134550 frames Cell Events: 4954 mean_circ: 0.934793
Ran for 135550 frames Cell Events: 4998 mean_circ: 0.93476
Ran for 136050 frames Cell Events: 5022 mean_circ: 0.934781
Ran for 136550 frames Cell Events: 5047 mean_circ: 0.934767
Ran for 137050 frames Cell Events: 5058 mean_circ: 0.934773
Ran for 138550 frames Cell Events: 5113 mean_circ: 0.934805
Ran for 139550 frames Cell Events: 5149 mean_circ: 0.934831
Ran for 140050 frames Cell Events: 5166 mean_circ: 0.934805
Ran for 141050 frames Cell Events: 5214 mean_circ: 0.934748
Ran for 141550 frames Cell Events: 5239 mean_circ: 0.934736
Ran for 142050 frames Cell Events: 5255 mean_circ: 0.934761
Ran for 143050 frames Cell Events: 5293 mean_circ: 0.934763
Ran for 146050 frames Cell Events: 5403 mean_circ: 0.934786
Ran for 146550 frames Cell Events: 5418 mean_circ: 0.934804
Ran for 147550 frames Cell Events: 5457 mean_circ: 0.934806
Ran for 148550 frames Cell Events: 5494 mean_circ: 0.934824
Ran for 149550 frames Cell Events: 5532 mean_circ: 0.934844
Ran for 150050 frames Cell Events: 5547 mean_circ: 0.934884
Ran for 151050 frames Cell Events: 5580 mean_circ: 0.934847
Ran for 152050 frames Cell Events: 5614 mean_circ: 0.934875
Ran for 152550 frames Cell Events: 5644 mean_circ: 0.934843
Ran for 153050 frames Cell Events: 5663 mean_circ: 0.934852
Ran for 153550 frames Cell Events: 5677 mean_circ: 0.934888
Ran for 154050 frames Cell Events: 5695 mean_circ: 0.934842
Ran for 155050 frames Cell Events: 5725 mean_circ: 0.934866
Ran for 155550 frames Cell Events: 5739 mean_circ: 0.93483
Ran for 156050 frames Cell Events: 5764 mean_circ: 0.934799
Ran for 156550 frames Cell Events: 5780 mean_circ: 0.934805
Ran for 157050 frames Cell Events: 5803 mean_circ: 0.934806
Ran for 158050 frames Cell Events: 5827 mean_circ: 0.934742
Ran for 158550 frames Cell Events: 5839 mean_circ: 0.934744
Ran for 159050 frames Cell Events: 5859 mean_circ: 0.93479
Ran for 159550 frames Cell Events: 5876 mean_circ: 0.934827
Ran for 162050 frames Cell Events: 5971 mean_circ: 0.934878
Ran for 162550 frames Cell Events: 5981 mean_circ: 0.93486
Ran for 164050 frames Cell Events: 6029 mean_circ: 0.934879
Ran for 164550 frames Cell Events: 6050 mean_circ: 0.934873
Ran for 165050 frames Cell Events: 6067 mean_circ: 0.934873
Ran for 165550 frames Cell Events: 6087 mean_circ: 0.934858
Ran for 166050 frames Cell Events: 6115 mean_circ: 0.934817
Ran for 166550 frames Cell Events: 6132 mean_circ: 0.934807
Ran for 167050 frames Cell Events: 6142 mean_circ: 0.93484
Ran for 167550 frames Cell Events: 6159 mean_circ: 0.934832
Ran for 169050 frames Cell Events: 6207 mean_circ: 0.934763
Ran for 169550 frames Cell Events: 6225 mean_circ: 0.934798
Ran for 170050 frames Cell Events: 6244 mean_circ: 0.934831
Ran for 170550 frames Cell Events: 6261 mean_circ: 0.934825
Ran for 171050 frames Cell Events: 6274 mean_circ: 0.934813
Ran for 171550 frames Cell Events: 6288 mean_circ: 0.93484
Ran for 172050 frames Cell Events: 6308 mean_circ: 0.934823
Ran for 172550 frames Cell Events: 6320 mean_circ: 0.934845
Ran for 174550 frames Cell Events: 6394 mean_circ: 0.934885
Ran for 175050 frames Cell Events: 6413 mean_circ: 0.934901
Ran for 176050 frames Cell Events: 6460 mean_circ: 0.934942
Ran for 177050 frames Cell Events: 6493 mean_circ: 0.934906
Ran for 177550 frames Cell Events: 6512 mean_circ: 0.934848
Ran for 178050 frames Cell Events: 6524 mean_circ: 0.934854
Ran for 178550 frames Cell Events: 6547 mean_circ: 0.934906
Ran for 179050 frames Cell Events: 6560 mean_circ: 0.934882
Ran for 181550 frames Cell Events: 6595 mean_circ: 0.934873
Ran for 182050 frames Cell Events: 6608 mean_circ: 0.934719
Ran for 182550 frames Cell Events: 6627 mean_circ: 0.934706
Ran for 183550 frames Cell Events: 6660 mean_circ: 0.934624
Ran for 184050 frames Cell Events: 6667 mean_circ: 0.934626
Ran for 185050 frames Cell Events: 6698 mean_circ: 0.934582
Ran for 185550 frames Cell Events: 6716 mean_circ: 0.934567
Ran for 186050 frames Cell Events: 6727 mean_circ: 0.934546
Ran for 186550 frames Cell Events: 6739 mean_circ: 0.934542
Ran for 187050 frames Cell Events: 6750 mean_circ: 0.93448
Ran for 187550 frames Cell Events: 6770 mean_circ: 0.934459
Ran for 188050 frames Cell Events: 6783 mean_circ: 0.934428
Ran for 188550 frames Cell Events: 6800 mean_circ: 0.934411
Ran for 189050 frames Cell Events: 6814 mean_circ: 0.93438
Ran for 189550 frames Cell Events: 6820 mean_circ: 0.93439
Ran for 190050 frames Cell Events: 6831 mean_circ: 0.9344
Ran for 190550 frames Cell Events: 6846 mean_circ: 0.934373
Ran for 192550 frames Cell Events: 6907 mean_circ: 0.934294
Ran for 193050 frames Cell Events: 6926 mean_circ: 0.934303
Ran for 193550 frames Cell Events: 6941 mean_circ: 0.934282
Ran for 194050 frames Cell Events: 6965 mean_circ: 0.934246
Ran for 194550 frames Cell Events: 6979 mean_circ: 0.934219
Ran for 195050 frames Cell Events: 6989 mean_circ: 0.934223
Ran for 197050 frames Cell Events: 7057 mean_circ: 0.93419
Ran for 197550 frames Cell Events: 7070 mean_circ: 0.934163
Ran for 198050 frames Cell Events: 7091 mean_circ: 0.934095
Ran for 198550 frames Cell Events: 7111 mean_circ: 0.934057
Ran for 199050 frames Cell Events: 7127 mean_circ: 0.934052
Ran for 199550 frames Cell Events: 7141 mean_circ: 0.93405
Ran for 200050 frames Cell Events: 7163 mean_circ: 0.933972
Ran for 201050 frames Cell Events: 7187 mean_circ: 0.933903
Ran for 201550 frames Cell Events: 7196 mean_circ: 0.933874
Ran for 202550 frames Cell Events: 7226 mean_circ: 0.933828
Ran for 203050 frames Cell Events: 7236 mean_circ: 0.933829
Ran for 203550 frames Cell Events: 7246 mean_circ: 0.93382
Ran for 204050 frames Cell Events: 7257 mean_circ: 0.933791
Ran for 204550 frames Cell Events: 7275 mean_circ: 0.933723
Ran for 205550 frames Cell Events: 7306 mean_circ: 0.933707
Ran for 206050 frames Cell Events: 7321 mean_circ: 0.933698
Ran for 206550 frames Cell Events: 7333 mean_circ: 0.933684
Ran for 207050 frames Cell Events: 7350 mean_circ: 0.933683
Ran for 207550 frames Cell Events: 7359 mean_circ: 0.933676
Ran for 208050 frames Cell Events: 7375 mean_circ: 0.933672
Ran for 208550 frames Cell Events: 7391 mean_circ: 0.933683
Ran for 209050 frames Cell Events: 7404 mean_circ: 0.933674
Ran for 209550 frames Cell Events: 7415 mean_circ: 0.933705
Ran for 210550 frames Cell Events: 7451 mean_circ: 0.933613
Ran for 211050 frames Cell Events: 7467 mean_circ: 0.933579
Ran for 211550 frames Cell Events: 7481 mean_circ: 0.933593
Ran for 212550 frames Cell Events: 7521 mean_circ: 0.933561
Ran for 213050 frames Cell Events: 7539 mean_circ: 0.93352
Ran for 214550 frames Cell Events: 7586 mean_circ: 0.933505
Ran for 215050 frames Cell Events: 7592 mean_circ: 0.933469
Ran for 216050 frames Cell Events: 7626 mean_circ: 0.933439
Ran for 216550 frames Cell Events: 7642 mean_circ: 0.933431
Ran for 217050 frames Cell Events: 7646 mean_circ: 0.933437
Ran for 217550 frames Cell Events: 7659 mean_circ: 0.933456
Ran for 219050 frames Cell Events: 7705 mean_circ: 0.933453
Ran for 221050 frames Cell Events: 7766 mean_circ: 0.933359
Ran for 221550 frames Cell Events: 7785 mean_circ: 0.933345
Ran for 222050 frames Cell Events: 7800 mean_circ: 0.933323
Ran for 222550 frames Cell Events: 7807 mean_circ: 0.933332
Ran for 223050 frames Cell Events: 7814 mean_circ: 0.933312
Ran for 223550 frames Cell Events: 7823 mean_circ: 0.933279
Ran for 224050 frames Cell Events: 7836 mean_circ: 0.933289
Ran for 224550 frames Cell Events: 7854 mean_circ: 0.933265
Ran for 225050 frames Cell Events: 7862 mean_circ: 0.933267
Ran for 225550 frames Cell Events: 7878 mean_circ: 0.933254
Ran for 226550 frames Cell Events: 7908 mean_circ: 0.933245
Ran for 227050 frames Cell Events: 7921 mean_circ: 0.933269
Ran for 227550 frames Cell Events: 7931 mean_circ: 0.93326
Ran for 228050 frames Cell Events: 7945 mean_circ: 0.933222
Ran for 228550 frames Cell Events: 7957 mean_circ: 0.933208
Ran for 229550 frames Cell Events: 7994 mean_circ: 0.933162
Ran for 230050 frames Cell Events: 8006 mean_circ: 0.933145
Ran for 231550 frames Cell Events: 8049 mean_circ: 0.933061
Ran for 232050 frames Cell Events: 8061 mean_circ: 0.933072
Ran for 232550 frames Cell Events: 8076 mean_circ: 0.933042
Ran for 233050 frames Cell Events: 8090 mean_circ: 0.933035
Ran for 233550 frames Cell Events: 8108 mean_circ: 0.933035
Ran for 234050 frames Cell Events: 8124 mean_circ: 0.933049
Ran for 234550 frames Cell Events: 8139 mean_circ: 0.933023
Ran for 235050 frames Cell Events: 8155 mean_circ: 0.933009
End this measurment..
Stopping time: 2.36774e+009
****************************************
Measurement finished
Mean Circularitiy: 0.933004
Mean Area: 641.344
Mean FL-1 intensity: 3130.03
Mean FL-2 intensity: 4547.32
Mean FL-3 intensity: 0
frames processed: 234307
Total Time: 117706ms
Number of Runs (new bg img) 0
Frames collected: 235231
Skipped frames: 56835
Rescued Frames: 5284486
Samples DAQ: 58807839
Samples written: 117615530
Samples per Channel: 58807765
FPS: 1998.47
Samples per second: 499618
Expected samples/s: 500000
Events: 8159
Events per second: 69.317
jumped back (PMT): 12
#Frames read, frequency
# 0 frames :335190
# 1 frames :117727
# 2 frames :5003
# 3 frames :1508
# 4 frames :1036
# 5 frames :553
# 6 frames :1915
# 7 frames :1845
# 8 frames :1119
# 9 frames :599
# 10 frames :765
# 11 frames :529
# 12 frames :484
# 13 frames :245
# 14 frames :275
# 15 frames :264
# 16 frames :310
# 17 frames :297
# 18 frames :233
# 19 frames :142
# 20 frames :84
# 21 frames :59
# 22 frames :52
# 23 frames :24
# 24 frames :29
# 25 frames :24
# 26 frames :19
# 27 frames :15
# 28 frames :14
# 29 frames :10
# 30 frames :9
# 31 frames :10
# 32 frames :3
# 33 frames :4
# 34 frames :6
# 35 frames :5
# 36 frames :1
# 37 frames :2
# 38 frames :1
# 39 frames :2
# 40 frames :1
# 41 frames :1
# 44 frames :2
# 48 frames :1
# 49 frames :2
# 51 frames :2
# 58 frames :1
# 61 frames :1
# 62 frames :1
# 66 frames :1
# 67 frames :1
# 72 frames :1
# 75 frames :1
# 87 frames :1
# 90 frames :2
# 94 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.0943
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0