Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_16.30.45
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "2e1750cba9cff835e57d417cba6640af",
"name": "M1_20170612_1321_dsRNA_R4_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "14:31:06"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8274 (max 8275) in '8274'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.5895
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.43711e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 15 mean_circ: 0.913239
Ran for 1050 frames Cell Events: 38 mean_circ: 0.913205
Ran for 1550 frames Cell Events: 45 mean_circ: 0.922783
Ran for 2050 frames Cell Events: 56 mean_circ: 0.922994
Ran for 2550 frames Cell Events: 69 mean_circ: 0.921453
Ran for 3050 frames Cell Events: 80 mean_circ: 0.919445
Ran for 4050 frames Cell Events: 110 mean_circ: 0.921832
Ran for 4550 frames Cell Events: 123 mean_circ: 0.920777
Ran for 5050 frames Cell Events: 141 mean_circ: 0.921302
Ran for 5550 frames Cell Events: 149 mean_circ: 0.921749
Ran for 6050 frames Cell Events: 159 mean_circ: 0.920203
Ran for 7050 frames Cell Events: 190 mean_circ: 0.916248
Ran for 7550 frames Cell Events: 204 mean_circ: 0.917391
Ran for 8050 frames Cell Events: 215 mean_circ: 0.917372
Ran for 9550 frames Cell Events: 271 mean_circ: 0.918077
Ran for 10050 frames Cell Events: 289 mean_circ: 0.917249
Ran for 11050 frames Cell Events: 325 mean_circ: 0.918213
Ran for 11550 frames Cell Events: 341 mean_circ: 0.918375
Ran for 12050 frames Cell Events: 359 mean_circ: 0.919129
Ran for 12550 frames Cell Events: 378 mean_circ: 0.919371
Ran for 13550 frames Cell Events: 407 mean_circ: 0.920749
Ran for 14050 frames Cell Events: 413 mean_circ: 0.920367
Ran for 14550 frames Cell Events: 427 mean_circ: 0.920418
Ran for 15050 frames Cell Events: 442 mean_circ: 0.920052
Ran for 15550 frames Cell Events: 454 mean_circ: 0.919351
Ran for 16050 frames Cell Events: 464 mean_circ: 0.919867
Ran for 17050 frames Cell Events: 486 mean_circ: 0.92037
Ran for 17550 frames Cell Events: 497 mean_circ: 0.920437
Ran for 18050 frames Cell Events: 516 mean_circ: 0.920615
Ran for 19050 frames Cell Events: 549 mean_circ: 0.920162
Ran for 20050 frames Cell Events: 582 mean_circ: 0.92121
Ran for 20550 frames Cell Events: 589 mean_circ: 0.920847
Ran for 22050 frames Cell Events: 636 mean_circ: 0.920459
Ran for 22550 frames Cell Events: 646 mean_circ: 0.920584
Ran for 24050 frames Cell Events: 685 mean_circ: 0.919944
Ran for 26050 frames Cell Events: 768 mean_circ: 0.920333
Ran for 27550 frames Cell Events: 834 mean_circ: 0.919547
Ran for 28050 frames Cell Events: 845 mean_circ: 0.919524
Ran for 28550 frames Cell Events: 859 mean_circ: 0.919727
Ran for 29050 frames Cell Events: 871 mean_circ: 0.919763
Ran for 29550 frames Cell Events: 882 mean_circ: 0.919692
Ran for 30050 frames Cell Events: 896 mean_circ: 0.919429
Ran for 31050 frames Cell Events: 920 mean_circ: 0.918826
Ran for 31550 frames Cell Events: 936 mean_circ: 0.918742
Ran for 32050 frames Cell Events: 951 mean_circ: 0.918692
Ran for 32550 frames Cell Events: 971 mean_circ: 0.918489
Ran for 33050 frames Cell Events: 983 mean_circ: 0.918336
Ran for 34050 frames Cell Events: 1007 mean_circ: 0.917896
Ran for 35550 frames Cell Events: 1049 mean_circ: 0.917272
Ran for 36050 frames Cell Events: 1063 mean_circ: 0.917312
Ran for 36550 frames Cell Events: 1076 mean_circ: 0.917059
Ran for 37050 frames Cell Events: 1090 mean_circ: 0.916923
Ran for 37550 frames Cell Events: 1112 mean_circ: 0.916939
Ran for 38050 frames Cell Events: 1124 mean_circ: 0.91722
Ran for 38550 frames Cell Events: 1128 mean_circ: 0.91725
Ran for 39050 frames Cell Events: 1135 mean_circ: 0.917334
Ran for 41550 frames Cell Events: 1220 mean_circ: 0.917913
Ran for 42550 frames Cell Events: 1249 mean_circ: 0.917899
Ran for 43050 frames Cell Events: 1260 mean_circ: 0.918006
Ran for 44050 frames Cell Events: 1295 mean_circ: 0.917815
Ran for 44550 frames Cell Events: 1313 mean_circ: 0.917921
Ran for 45050 frames Cell Events: 1321 mean_circ: 0.918243
Ran for 45550 frames Cell Events: 1330 mean_circ: 0.918347
Ran for 46050 frames Cell Events: 1352 mean_circ: 0.918116
Ran for 46550 frames Cell Events: 1367 mean_circ: 0.918123
Ran for 47050 frames Cell Events: 1388 mean_circ: 0.918222
Ran for 47550 frames Cell Events: 1400 mean_circ: 0.918499
Ran for 48050 frames Cell Events: 1410 mean_circ: 0.918651
Ran for 49050 frames Cell Events: 1440 mean_circ: 0.918855
Ran for 49550 frames Cell Events: 1455 mean_circ: 0.91894
Ran for 50050 frames Cell Events: 1467 mean_circ: 0.919182
Ran for 50550 frames Cell Events: 1490 mean_circ: 0.919232
Ran for 51550 frames Cell Events: 1524 mean_circ: 0.919292
Ran for 52550 frames Cell Events: 1552 mean_circ: 0.918844
Ran for 53050 frames Cell Events: 1563 mean_circ: 0.918918
Ran for 54050 frames Cell Events: 1604 mean_circ: 0.918923
Ran for 55050 frames Cell Events: 1631 mean_circ: 0.919119
Ran for 55550 frames Cell Events: 1641 mean_circ: 0.919072
Ran for 56050 frames Cell Events: 1646 mean_circ: 0.919137
Ran for 56550 frames Cell Events: 1659 mean_circ: 0.919085
Ran for 57050 frames Cell Events: 1669 mean_circ: 0.919182
Ran for 57550 frames Cell Events: 1684 mean_circ: 0.919518
Ran for 58050 frames Cell Events: 1700 mean_circ: 0.91939
Ran for 59550 frames Cell Events: 1744 mean_circ: 0.919159
Ran for 60550 frames Cell Events: 1768 mean_circ: 0.91919
Ran for 61050 frames Cell Events: 1781 mean_circ: 0.919274
Ran for 61550 frames Cell Events: 1796 mean_circ: 0.919275
Ran for 62050 frames Cell Events: 1813 mean_circ: 0.919291
Ran for 63050 frames Cell Events: 1847 mean_circ: 0.918995
Ran for 63550 frames Cell Events: 1860 mean_circ: 0.919008
Ran for 64050 frames Cell Events: 1875 mean_circ: 0.919172
Ran for 65550 frames Cell Events: 1911 mean_circ: 0.919286
Ran for 67050 frames Cell Events: 1949 mean_circ: 0.919227
Ran for 67550 frames Cell Events: 1965 mean_circ: 0.919009
Ran for 68050 frames Cell Events: 1985 mean_circ: 0.918872
Ran for 68550 frames Cell Events: 2010 mean_circ: 0.918903
Ran for 69050 frames Cell Events: 2029 mean_circ: 0.919131
Ran for 70550 frames Cell Events: 2081 mean_circ: 0.919163
Ran for 71550 frames Cell Events: 2106 mean_circ: 0.919286
Ran for 72050 frames Cell Events: 2127 mean_circ: 0.919197
Ran for 73050 frames Cell Events: 2155 mean_circ: 0.919261
Ran for 74050 frames Cell Events: 2185 mean_circ: 0.919489
Ran for 74550 frames Cell Events: 2203 mean_circ: 0.919484
Ran for 75050 frames Cell Events: 2210 mean_circ: 0.919502
Ran for 75550 frames Cell Events: 2227 mean_circ: 0.919535
Ran for 76050 frames Cell Events: 2238 mean_circ: 0.919596
Ran for 76550 frames Cell Events: 2244 mean_circ: 0.919558
Ran for 77550 frames Cell Events: 2275 mean_circ: 0.91967
Ran for 79050 frames Cell Events: 2321 mean_circ: 0.919796
Ran for 79550 frames Cell Events: 2336 mean_circ: 0.919798
Ran for 80050 frames Cell Events: 2354 mean_circ: 0.919769
Ran for 80550 frames Cell Events: 2367 mean_circ: 0.919859
Ran for 81550 frames Cell Events: 2408 mean_circ: 0.919657
Ran for 82050 frames Cell Events: 2416 mean_circ: 0.919656
Ran for 82550 frames Cell Events: 2430 mean_circ: 0.919743
Ran for 83550 frames Cell Events: 2457 mean_circ: 0.919849
Ran for 84550 frames Cell Events: 2490 mean_circ: 0.919663
Ran for 85050 frames Cell Events: 2503 mean_circ: 0.919755
Ran for 85550 frames Cell Events: 2510 mean_circ: 0.919844
Ran for 86550 frames Cell Events: 2535 mean_circ: 0.919741
Ran for 87050 frames Cell Events: 2543 mean_circ: 0.919759
Ran for 88050 frames Cell Events: 2575 mean_circ: 0.919809
Ran for 88550 frames Cell Events: 2587 mean_circ: 0.919797
Ran for 89050 frames Cell Events: 2607 mean_circ: 0.919695
Ran for 89550 frames Cell Events: 2628 mean_circ: 0.919623
Ran for 90050 frames Cell Events: 2642 mean_circ: 0.919678
Ran for 91050 frames Cell Events: 2689 mean_circ: 0.919778
Ran for 91550 frames Cell Events: 2705 mean_circ: 0.919869
Ran for 92050 frames Cell Events: 2716 mean_circ: 0.919966
Ran for 92550 frames Cell Events: 2740 mean_circ: 0.919955
Ran for 93050 frames Cell Events: 2752 mean_circ: 0.919967
Ran for 93550 frames Cell Events: 2767 mean_circ: 0.920048
Ran for 94050 frames Cell Events: 2781 mean_circ: 0.920098
Ran for 94550 frames Cell Events: 2795 mean_circ: 0.92003
Ran for 95050 frames Cell Events: 2813 mean_circ: 0.92007
Ran for 97050 frames Cell Events: 2889 mean_circ: 0.919897
Ran for 97550 frames Cell Events: 2900 mean_circ: 0.919969
Ran for 98050 frames Cell Events: 2912 mean_circ: 0.920042
Ran for 98550 frames Cell Events: 2922 mean_circ: 0.920121
Ran for 99050 frames Cell Events: 2933 mean_circ: 0.920137
Ran for 99550 frames Cell Events: 2945 mean_circ: 0.920133
Ran for 100050 frames Cell Events: 2959 mean_circ: 0.920225
Ran for 100550 frames Cell Events: 2970 mean_circ: 0.920217
Ran for 101550 frames Cell Events: 3007 mean_circ: 0.920256
Ran for 102550 frames Cell Events: 3046 mean_circ: 0.920306
Ran for 103050 frames Cell Events: 3071 mean_circ: 0.920322
Ran for 103550 frames Cell Events: 3086 mean_circ: 0.920388
Ran for 104050 frames Cell Events: 3098 mean_circ: 0.920222
Ran for 104550 frames Cell Events: 3109 mean_circ: 0.9202
Ran for 105050 frames Cell Events: 3124 mean_circ: 0.920143
Ran for 106050 frames Cell Events: 3157 mean_circ: 0.920264
Ran for 106550 frames Cell Events: 3179 mean_circ: 0.92027
Ran for 107550 frames Cell Events: 3206 mean_circ: 0.920345
Ran for 108050 frames Cell Events: 3221 mean_circ: 0.920354
Ran for 108550 frames Cell Events: 3238 mean_circ: 0.920316
Ran for 109050 frames Cell Events: 3248 mean_circ: 0.920267
Ran for 109550 frames Cell Events: 3265 mean_circ: 0.9202
Ran for 110050 frames Cell Events: 3277 mean_circ: 0.920285
Ran for 110550 frames Cell Events: 3289 mean_circ: 0.920319
Ran for 111050 frames Cell Events: 3309 mean_circ: 0.920196
Ran for 111550 frames Cell Events: 3328 mean_circ: 0.920135
Ran for 112550 frames Cell Events: 3359 mean_circ: 0.920217
Ran for 113050 frames Cell Events: 3367 mean_circ: 0.92024
Ran for 113550 frames Cell Events: 3375 mean_circ: 0.920149
Ran for 114050 frames Cell Events: 3398 mean_circ: 0.920167
Ran for 115050 frames Cell Events: 3432 mean_circ: 0.920102
Ran for 115550 frames Cell Events: 3442 mean_circ: 0.920126
Ran for 116050 frames Cell Events: 3450 mean_circ: 0.920043
Ran for 117050 frames Cell Events: 3479 mean_circ: 0.92003
Ran for 117550 frames Cell Events: 3496 mean_circ: 0.919997
Ran for 118050 frames Cell Events: 3506 mean_circ: 0.920045
Ran for 118550 frames Cell Events: 3521 mean_circ: 0.920044
Ran for 119050 frames Cell Events: 3533 mean_circ: 0.920045
Ran for 120550 frames Cell Events: 3588 mean_circ: 0.919873
Ran for 121050 frames Cell Events: 3601 mean_circ: 0.919893
Ran for 121550 frames Cell Events: 3616 mean_circ: 0.919869
Ran for 122050 frames Cell Events: 3628 mean_circ: 0.919904
Ran for 122550 frames Cell Events: 3653 mean_circ: 0.919964
Ran for 123050 frames Cell Events: 3666 mean_circ: 0.920042
Ran for 123550 frames Cell Events: 3680 mean_circ: 0.920108
Ran for 124050 frames Cell Events: 3693 mean_circ: 0.92015
Ran for 124550 frames Cell Events: 3710 mean_circ: 0.920086
Ran for 125550 frames Cell Events: 3738 mean_circ: 0.920101
Ran for 126050 frames Cell Events: 3757 mean_circ: 0.920202
Ran for 126550 frames Cell Events: 3769 mean_circ: 0.920207
Ran for 127050 frames Cell Events: 3786 mean_circ: 0.920256
Ran for 127550 frames Cell Events: 3798 mean_circ: 0.920328
Ran for 128550 frames Cell Events: 3821 mean_circ: 0.920322
Ran for 129050 frames Cell Events: 3829 mean_circ: 0.920252
Ran for 129550 frames Cell Events: 3841 mean_circ: 0.920311
Ran for 130050 frames Cell Events: 3852 mean_circ: 0.920298
Ran for 131050 frames Cell Events: 3886 mean_circ: 0.920298
Ran for 131550 frames Cell Events: 3900 mean_circ: 0.92028
Ran for 133550 frames Cell Events: 3962 mean_circ: 0.920236
Ran for 134050 frames Cell Events: 3985 mean_circ: 0.920204
Ran for 134550 frames Cell Events: 4001 mean_circ: 0.920252
Ran for 137050 frames Cell Events: 4064 mean_circ: 0.92001
Ran for 137550 frames Cell Events: 4074 mean_circ: 0.919913
Ran for 138050 frames Cell Events: 4089 mean_circ: 0.919806
Ran for 139050 frames Cell Events: 4119 mean_circ: 0.919914
Ran for 139550 frames Cell Events: 4132 mean_circ: 0.919923
Ran for 140050 frames Cell Events: 4148 mean_circ: 0.919804
Ran for 140550 frames Cell Events: 4155 mean_circ: 0.919862
Ran for 141050 frames Cell Events: 4169 mean_circ: 0.919886
Ran for 142550 frames Cell Events: 4212 mean_circ: 0.919874
Ran for 143050 frames Cell Events: 4219 mean_circ: 0.919799
Ran for 143550 frames Cell Events: 4236 mean_circ: 0.91983
Ran for 144050 frames Cell Events: 4257 mean_circ: 0.919862
Ran for 144550 frames Cell Events: 4269 mean_circ: 0.919872
Ran for 145050 frames Cell Events: 4284 mean_circ: 0.919821
Ran for 145550 frames Cell Events: 4296 mean_circ: 0.919823
Ran for 146050 frames Cell Events: 4310 mean_circ: 0.919776
Ran for 146550 frames Cell Events: 4323 mean_circ: 0.919808
Ran for 147050 frames Cell Events: 4336 mean_circ: 0.919698
Ran for 149050 frames Cell Events: 4395 mean_circ: 0.919787
Ran for 149550 frames Cell Events: 4413 mean_circ: 0.919836
Ran for 150050 frames Cell Events: 4424 mean_circ: 0.919846
Ran for 151050 frames Cell Events: 4458 mean_circ: 0.919816
Ran for 152050 frames Cell Events: 4484 mean_circ: 0.919857
Ran for 152550 frames Cell Events: 4500 mean_circ: 0.919896
Ran for 153050 frames Cell Events: 4522 mean_circ: 0.919956
Ran for 154050 frames Cell Events: 4559 mean_circ: 0.920066
Ran for 154550 frames Cell Events: 4579 mean_circ: 0.920118
Ran for 155050 frames Cell Events: 4595 mean_circ: 0.920028
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Ran for 156050 frames Cell Events: 4627 mean_circ: 0.920127
Ran for 157050 frames Cell Events: 4660 mean_circ: 0.920208
Ran for 157550 frames Cell Events: 4677 mean_circ: 0.920268
Ran for 158050 frames Cell Events: 4696 mean_circ: 0.92019
Ran for 158550 frames Cell Events: 4717 mean_circ: 0.920199
Ran for 159050 frames Cell Events: 4730 mean_circ: 0.920179
Ran for 159550 frames Cell Events: 4741 mean_circ: 0.920211
Ran for 160550 frames Cell Events: 4778 mean_circ: 0.920081
Ran for 161050 frames Cell Events: 4800 mean_circ: 0.920088
Ran for 161550 frames Cell Events: 4818 mean_circ: 0.920083
Ran for 162050 frames Cell Events: 4830 mean_circ: 0.920135
Ran for 162550 frames Cell Events: 4849 mean_circ: 0.9201
Ran for 163050 frames Cell Events: 4855 mean_circ: 0.920116
Ran for 163550 frames Cell Events: 4879 mean_circ: 0.919884
Ran for 164050 frames Cell Events: 4893 mean_circ: 0.919863
Ran for 164550 frames Cell Events: 4912 mean_circ: 0.919885
Ran for 165050 frames Cell Events: 4932 mean_circ: 0.919853
Ran for 166050 frames Cell Events: 4966 mean_circ: 0.919836
Ran for 166550 frames Cell Events: 4978 mean_circ: 0.919897
Ran for 167050 frames Cell Events: 4988 mean_circ: 0.919934
Ran for 167550 frames Cell Events: 4998 mean_circ: 0.919956
Ran for 170050 frames Cell Events: 5078 mean_circ: 0.919914
Ran for 170550 frames Cell Events: 5093 mean_circ: 0.91986
Ran for 171050 frames Cell Events: 5108 mean_circ: 0.919847
Ran for 171550 frames Cell Events: 5116 mean_circ: 0.919858
Ran for 172050 frames Cell Events: 5117 mean_circ: 0.919856
Ran for 173550 frames Cell Events: 5168 mean_circ: 0.91986
Ran for 174050 frames Cell Events: 5177 mean_circ: 0.919889
Ran for 174550 frames Cell Events: 5194 mean_circ: 0.919876
Ran for 175050 frames Cell Events: 5205 mean_circ: 0.91986
Ran for 175550 frames Cell Events: 5215 mean_circ: 0.919881
Ran for 176050 frames Cell Events: 5236 mean_circ: 0.91986
Ran for 176550 frames Cell Events: 5248 mean_circ: 0.91988
Ran for 177050 frames Cell Events: 5263 mean_circ: 0.919946
Ran for 177550 frames Cell Events: 5271 mean_circ: 0.919935
Ran for 178550 frames Cell Events: 5309 mean_circ: 0.919967
Ran for 179550 frames Cell Events: 5354 mean_circ: 0.919918
Ran for 180050 frames Cell Events: 5368 mean_circ: 0.919929
Ran for 180550 frames Cell Events: 5388 mean_circ: 0.919975
Ran for 181050 frames Cell Events: 5408 mean_circ: 0.919942
Ran for 181550 frames Cell Events: 5424 mean_circ: 0.919971
Ran for 183550 frames Cell Events: 5494 mean_circ: 0.920085
Ran for 184050 frames Cell Events: 5504 mean_circ: 0.920068
Ran for 184550 frames Cell Events: 5517 mean_circ: 0.920058
Ran for 185550 frames Cell Events: 5562 mean_circ: 0.920186
Ran for 187550 frames Cell Events: 5635 mean_circ: 0.920285
Ran for 188050 frames Cell Events: 5663 mean_circ: 0.920293
Ran for 188550 frames Cell Events: 5675 mean_circ: 0.920277
Ran for 189050 frames Cell Events: 5702 mean_circ: 0.920311
Ran for 189550 frames Cell Events: 5719 mean_circ: 0.920248
Ran for 190050 frames Cell Events: 5730 mean_circ: 0.920216
Ran for 190550 frames Cell Events: 5742 mean_circ: 0.920259
Ran for 191050 frames Cell Events: 5758 mean_circ: 0.920236
Ran for 191550 frames Cell Events: 5770 mean_circ: 0.920178
Ran for 192050 frames Cell Events: 5785 mean_circ: 0.920207
Ran for 192550 frames Cell Events: 5800 mean_circ: 0.920226
Ran for 193550 frames Cell Events: 5826 mean_circ: 0.920266
Ran for 194550 frames Cell Events: 5850 mean_circ: 0.920321
Ran for 195050 frames Cell Events: 5861 mean_circ: 0.920311
Ran for 195550 frames Cell Events: 5880 mean_circ: 0.920391
Ran for 196550 frames Cell Events: 5903 mean_circ: 0.92041
Ran for 197050 frames Cell Events: 5913 mean_circ: 0.920366
Ran for 197550 frames Cell Events: 5929 mean_circ: 0.920361
Ran for 198050 frames Cell Events: 5939 mean_circ: 0.920366
Ran for 198550 frames Cell Events: 5954 mean_circ: 0.920323
Ran for 199050 frames Cell Events: 5966 mean_circ: 0.92034
Ran for 200050 frames Cell Events: 5995 mean_circ: 0.920399
Ran for 200550 frames Cell Events: 6009 mean_circ: 0.920393
Ran for 201050 frames Cell Events: 6026 mean_circ: 0.920408
Ran for 201550 frames Cell Events: 6040 mean_circ: 0.920381
Ran for 203550 frames Cell Events: 6109 mean_circ: 0.920339
Ran for 204050 frames Cell Events: 6125 mean_circ: 0.920381
Ran for 205550 frames Cell Events: 6152 mean_circ: 0.920394
Ran for 206050 frames Cell Events: 6169 mean_circ: 0.920394
Ran for 206550 frames Cell Events: 6181 mean_circ: 0.920425
Ran for 207550 frames Cell Events: 6212 mean_circ: 0.920425
Ran for 208050 frames Cell Events: 6225 mean_circ: 0.920469
Ran for 209050 frames Cell Events: 6252 mean_circ: 0.920448
Ran for 210050 frames Cell Events: 6292 mean_circ: 0.920487
Ran for 210550 frames Cell Events: 6301 mean_circ: 0.9205
Ran for 211050 frames Cell Events: 6318 mean_circ: 0.920474
Ran for 213050 frames Cell Events: 6387 mean_circ: 0.920397
Ran for 213550 frames Cell Events: 6406 mean_circ: 0.920419
Ran for 214050 frames Cell Events: 6419 mean_circ: 0.920424
Ran for 215050 frames Cell Events: 6463 mean_circ: 0.920462
Ran for 215550 frames Cell Events: 6483 mean_circ: 0.920491
Ran for 216550 frames Cell Events: 6502 mean_circ: 0.92049
Ran for 217550 frames Cell Events: 6532 mean_circ: 0.920478
Ran for 218050 frames Cell Events: 6551 mean_circ: 0.920525
Ran for 220050 frames Cell Events: 6607 mean_circ: 0.920595
Ran for 220550 frames Cell Events: 6627 mean_circ: 0.920615
Ran for 222050 frames Cell Events: 6687 mean_circ: 0.920552
Ran for 222550 frames Cell Events: 6702 mean_circ: 0.920588
Ran for 223050 frames Cell Events: 6712 mean_circ: 0.920533
Ran for 223550 frames Cell Events: 6722 mean_circ: 0.920519
Ran for 224550 frames Cell Events: 6760 mean_circ: 0.920507
Ran for 225050 frames Cell Events: 6779 mean_circ: 0.92054
Ran for 225550 frames Cell Events: 6804 mean_circ: 0.920526
Ran for 226550 frames Cell Events: 6833 mean_circ: 0.92057
Ran for 227050 frames Cell Events: 6850 mean_circ: 0.92062
Ran for 227550 frames Cell Events: 6868 mean_circ: 0.920647
Ran for 228050 frames Cell Events: 6887 mean_circ: 0.920556
Ran for 228550 frames Cell Events: 6911 mean_circ: 0.92055
Ran for 229050 frames Cell Events: 6919 mean_circ: 0.920503
Ran for 229550 frames Cell Events: 6936 mean_circ: 0.920462
Ran for 230550 frames Cell Events: 6975 mean_circ: 0.920499
Ran for 232050 frames Cell Events: 7019 mean_circ: 0.920519
Ran for 232550 frames Cell Events: 7030 mean_circ: 0.920525
Ran for 233050 frames Cell Events: 7044 mean_circ: 0.920441
Ran for 233550 frames Cell Events: 7051 mean_circ: 0.920416
Ran for 234050 frames Cell Events: 7069 mean_circ: 0.920433
Ran for 234550 frames Cell Events: 7086 mean_circ: 0.920421
Ran for 235050 frames Cell Events: 7099 mean_circ: 0.920365
Ran for 235550 frames Cell Events: 7111 mean_circ: 0.920289
Ran for 236050 frames Cell Events: 7123 mean_circ: 0.920323
Ran for 237050 frames Cell Events: 7161 mean_circ: 0.920363
Ran for 237550 frames Cell Events: 7178 mean_circ: 0.920301
Ran for 238050 frames Cell Events: 7197 mean_circ: 0.920285
Ran for 238550 frames Cell Events: 7206 mean_circ: 0.920276
Ran for 239550 frames Cell Events: 7240 mean_circ: 0.920206
Ran for 241050 frames Cell Events: 7282 mean_circ: 0.920184
Ran for 241550 frames Cell Events: 7295 mean_circ: 0.920189
Ran for 242050 frames Cell Events: 7307 mean_circ: 0.920174
Ran for 242550 frames Cell Events: 7318 mean_circ: 0.920173
Ran for 243550 frames Cell Events: 7346 mean_circ: 0.920159
Ran for 244050 frames Cell Events: 7358 mean_circ: 0.92013
Ran for 244550 frames Cell Events: 7369 mean_circ: 0.920168
Ran for 245550 frames Cell Events: 7395 mean_circ: 0.920112
Ran for 246050 frames Cell Events: 7409 mean_circ: 0.920102
Ran for 246550 frames Cell Events: 7423 mean_circ: 0.920099
Ran for 247050 frames Cell Events: 7434 mean_circ: 0.920071
Ran for 248050 frames Cell Events: 7459 mean_circ: 0.920127
Ran for 249050 frames Cell Events: 7494 mean_circ: 0.920142
Ran for 249550 frames Cell Events: 7508 mean_circ: 0.920175
Ran for 251550 frames Cell Events: 7576 mean_circ: 0.92004
Ran for 252050 frames Cell Events: 7600 mean_circ: 0.919968
Ran for 253050 frames Cell Events: 7631 mean_circ: 0.919984
Ran for 253550 frames Cell Events: 7642 mean_circ: 0.920046
Ran for 254550 frames Cell Events: 7690 mean_circ: 0.920066
Ran for 255550 frames Cell Events: 7712 mean_circ: 0.920074
Ran for 257050 frames Cell Events: 7762 mean_circ: 0.920001
Ran for 257550 frames Cell Events: 7782 mean_circ: 0.92002
Ran for 258050 frames Cell Events: 7797 mean_circ: 0.920019
Ran for 258550 frames Cell Events: 7811 mean_circ: 0.920023
Ran for 259050 frames Cell Events: 7826 mean_circ: 0.92
Ran for 259550 frames Cell Events: 7840 mean_circ: 0.920018
Ran for 260050 frames Cell Events: 7860 mean_circ: 0.92006
Ran for 260550 frames Cell Events: 7871 mean_circ: 0.920084
Ran for 261050 frames Cell Events: 7888 mean_circ: 0.92007
Ran for 262050 frames Cell Events: 7928 mean_circ: 0.920033
Ran for 262550 frames Cell Events: 7943 mean_circ: 0.920013
Ran for 264050 frames Cell Events: 7996 mean_circ: 0.919894
Ran for 265050 frames Cell Events: 8033 mean_circ: 0.919899
Ran for 265550 frames Cell Events: 8056 mean_circ: 0.919889
Ran for 267550 frames Cell Events: 8122 mean_circ: 0.919794
Ran for 268050 frames Cell Events: 8139 mean_circ: 0.919777
Ran for 268550 frames Cell Events: 8151 mean_circ: 0.919769
Ran for 270050 frames Cell Events: 8191 mean_circ: 0.919706
Ran for 270550 frames Cell Events: 8207 mean_circ: 0.919697
Ran for 271050 frames Cell Events: 8222 mean_circ: 0.919698
Ran for 271550 frames Cell Events: 8242 mean_circ: 0.919722
Ran for 272050 frames Cell Events: 8251 mean_circ: 0.919741
Ran for 272550 frames Cell Events: 8263 mean_circ: 0.919753
End this measurment..
Stopping time: 2.43724e+009
****************************************
Measurement finished
Mean Circularitiy: 0.919766
Mean Area: 689.326
Mean FL-1 intensity: 3052.75
Mean FL-2 intensity: 4084.03
Mean FL-3 intensity: 0
frames processed: 272788
Total Time: 136528ms
Number of Runs (new bg img) 0
Frames collected: 272950
Skipped frames: 2019
Rescued Frames: 405550
Samples DAQ: 68237492
Samples written: 136474820
Samples per Channel: 68237410
FPS: 1999.22
Samples per second: 499805
Expected samples/s: 500000
Events: 8275
Events per second: 60.6102
jumped back (PMT): 12
#Frames read, frequency
# 0 frames :375431
# 1 frames :150564
# 2 frames :6187
# 3 frames :2040
# 4 frames :1209
# 5 frames :464
# 6 frames :1359
# 7 frames :2297
# 8 frames :1109
# 9 frames :914
# 10 frames :1747
# 11 frames :628
# 12 frames :485
# 13 frames :261
# 14 frames :182
# 15 frames :206
# 16 frames :174
# 17 frames :125
# 18 frames :114
# 19 frames :81
# 20 frames :45
# 21 frames :55
# 22 frames :43
# 23 frames :32
# 24 frames :22
# 25 frames :15
# 26 frames :19
# 27 frames :13
# 28 frames :15
# 29 frames :4
# 30 frames :8
# 31 frames :7
# 32 frames :7
# 33 frames :3
# 34 frames :5
# 36 frames :1
# 37 frames :3
# 38 frames :1
# 40 frames :2
# 41 frames :1
# 45 frames :1
# 47 frames :2
# 48 frames :1
# 50 frames :1
# 52 frames :1
# 54 frames :1
# 56 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.5895
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0