Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_17.18.31
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "a3d019a613c8a71f7328a8d50b3cba87",
"name": "M1_20170613_1621_dsRNA_V1_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "15:18:55"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7015
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.53429e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 13 mean_circ: 0.934704
Ran for 1050 frames Cell Events: 25 mean_circ: 0.94236
Ran for 1550 frames Cell Events: 35 mean_circ: 0.938457
Ran for 2550 frames Cell Events: 71 mean_circ: 0.943201
Ran for 3050 frames Cell Events: 83 mean_circ: 0.941099
Ran for 4050 frames Cell Events: 102 mean_circ: 0.942562
Ran for 4550 frames Cell Events: 114 mean_circ: 0.942428
Ran for 5550 frames Cell Events: 150 mean_circ: 0.940978
Ran for 6050 frames Cell Events: 164 mean_circ: 0.941392
Ran for 8050 frames Cell Events: 206 mean_circ: 0.939594
Ran for 9550 frames Cell Events: 253 mean_circ: 0.939511
Ran for 10550 frames Cell Events: 277 mean_circ: 0.938353
Ran for 11050 frames Cell Events: 292 mean_circ: 0.938365
Ran for 11550 frames Cell Events: 316 mean_circ: 0.938235
Ran for 13550 frames Cell Events: 377 mean_circ: 0.937223
Ran for 14050 frames Cell Events: 394 mean_circ: 0.937063
Ran for 14550 frames Cell Events: 404 mean_circ: 0.937095
Ran for 15550 frames Cell Events: 429 mean_circ: 0.937313
Ran for 16050 frames Cell Events: 441 mean_circ: 0.937529
Ran for 16550 frames Cell Events: 449 mean_circ: 0.937644
Ran for 17050 frames Cell Events: 458 mean_circ: 0.937992
Ran for 17550 frames Cell Events: 467 mean_circ: 0.938236
Ran for 18050 frames Cell Events: 472 mean_circ: 0.93851
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Ran for 19550 frames Cell Events: 502 mean_circ: 0.938419
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Ran for 22050 frames Cell Events: 571 mean_circ: 0.938186
Ran for 22550 frames Cell Events: 594 mean_circ: 0.938547
Ran for 23050 frames Cell Events: 605 mean_circ: 0.938658
Ran for 23550 frames Cell Events: 617 mean_circ: 0.938642
Ran for 24550 frames Cell Events: 640 mean_circ: 0.938283
Ran for 25050 frames Cell Events: 651 mean_circ: 0.938401
Ran for 25550 frames Cell Events: 665 mean_circ: 0.938658
Ran for 26550 frames Cell Events: 685 mean_circ: 0.938837
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Ran for 28550 frames Cell Events: 720 mean_circ: 0.938393
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Ran for 30050 frames Cell Events: 771 mean_circ: 0.938224
Ran for 30550 frames Cell Events: 782 mean_circ: 0.938412
Ran for 31050 frames Cell Events: 795 mean_circ: 0.938398
Ran for 32050 frames Cell Events: 826 mean_circ: 0.938169
Ran for 34050 frames Cell Events: 876 mean_circ: 0.9381
Ran for 34550 frames Cell Events: 888 mean_circ: 0.937875
Ran for 35050 frames Cell Events: 902 mean_circ: 0.937987
Ran for 35550 frames Cell Events: 912 mean_circ: 0.938036
Ran for 37550 frames Cell Events: 975 mean_circ: 0.938018
Ran for 38050 frames Cell Events: 986 mean_circ: 0.938043
Ran for 39050 frames Cell Events: 1007 mean_circ: 0.937982
Ran for 39550 frames Cell Events: 1022 mean_circ: 0.93794
Ran for 40050 frames Cell Events: 1035 mean_circ: 0.937899
Ran for 41050 frames Cell Events: 1063 mean_circ: 0.937578
Ran for 41550 frames Cell Events: 1073 mean_circ: 0.93717
Ran for 42050 frames Cell Events: 1087 mean_circ: 0.937297
Ran for 42550 frames Cell Events: 1104 mean_circ: 0.937127
Ran for 43050 frames Cell Events: 1118 mean_circ: 0.9371
Ran for 43550 frames Cell Events: 1125 mean_circ: 0.936976
Ran for 44050 frames Cell Events: 1138 mean_circ: 0.936995
Ran for 44550 frames Cell Events: 1144 mean_circ: 0.936955
Ran for 47050 frames Cell Events: 1207 mean_circ: 0.936974
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Ran for 48550 frames Cell Events: 1245 mean_circ: 0.936558
Ran for 49050 frames Cell Events: 1259 mean_circ: 0.936699
Ran for 51050 frames Cell Events: 1305 mean_circ: 0.936522
Ran for 51550 frames Cell Events: 1315 mean_circ: 0.936571
Ran for 52050 frames Cell Events: 1329 mean_circ: 0.93666
Ran for 53550 frames Cell Events: 1382 mean_circ: 0.936658
Ran for 54550 frames Cell Events: 1417 mean_circ: 0.936635
Ran for 55050 frames Cell Events: 1430 mean_circ: 0.936701
Ran for 56550 frames Cell Events: 1486 mean_circ: 0.936545
Ran for 57050 frames Cell Events: 1493 mean_circ: 0.936527
Ran for 57550 frames Cell Events: 1508 mean_circ: 0.936347
Ran for 58050 frames Cell Events: 1526 mean_circ: 0.936032
Ran for 58550 frames Cell Events: 1536 mean_circ: 0.93609
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Ran for 60050 frames Cell Events: 1572 mean_circ: 0.935873
Ran for 60550 frames Cell Events: 1588 mean_circ: 0.935932
Ran for 61050 frames Cell Events: 1597 mean_circ: 0.935962
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Ran for 62050 frames Cell Events: 1614 mean_circ: 0.936032
Ran for 62550 frames Cell Events: 1627 mean_circ: 0.936085
Ran for 63550 frames Cell Events: 1654 mean_circ: 0.936155
Ran for 64050 frames Cell Events: 1667 mean_circ: 0.936197
Ran for 65550 frames Cell Events: 1706 mean_circ: 0.936092
Ran for 66050 frames Cell Events: 1719 mean_circ: 0.935924
Ran for 66550 frames Cell Events: 1737 mean_circ: 0.935874
Ran for 67050 frames Cell Events: 1755 mean_circ: 0.935887
Ran for 69050 frames Cell Events: 1820 mean_circ: 0.935893
Ran for 69550 frames Cell Events: 1835 mean_circ: 0.935925
Ran for 70550 frames Cell Events: 1861 mean_circ: 0.935951
Ran for 71550 frames Cell Events: 1883 mean_circ: 0.936101
Ran for 73050 frames Cell Events: 1923 mean_circ: 0.936081
Ran for 73550 frames Cell Events: 1945 mean_circ: 0.935973
Ran for 74050 frames Cell Events: 1964 mean_circ: 0.935889
Ran for 76050 frames Cell Events: 2013 mean_circ: 0.935781
Ran for 76550 frames Cell Events: 2026 mean_circ: 0.935833
Ran for 77050 frames Cell Events: 2038 mean_circ: 0.935708
Ran for 78550 frames Cell Events: 2074 mean_circ: 0.93551
Ran for 79050 frames Cell Events: 2088 mean_circ: 0.935479
Ran for 80550 frames Cell Events: 2141 mean_circ: 0.935331
Ran for 81050 frames Cell Events: 2160 mean_circ: 0.935434
Ran for 81550 frames Cell Events: 2173 mean_circ: 0.935383
Ran for 82050 frames Cell Events: 2185 mean_circ: 0.935364
Ran for 82550 frames Cell Events: 2197 mean_circ: 0.935326
Ran for 83050 frames Cell Events: 2214 mean_circ: 0.935331
Ran for 83550 frames Cell Events: 2227 mean_circ: 0.935269
Ran for 84050 frames Cell Events: 2240 mean_circ: 0.935356
Ran for 84550 frames Cell Events: 2251 mean_circ: 0.935262
Ran for 85550 frames Cell Events: 2286 mean_circ: 0.935117
Ran for 86050 frames Cell Events: 2308 mean_circ: 0.935181
Ran for 86550 frames Cell Events: 2327 mean_circ: 0.935311
Ran for 87550 frames Cell Events: 2354 mean_circ: 0.935454
Ran for 88050 frames Cell Events: 2361 mean_circ: 0.935478
Ran for 88550 frames Cell Events: 2375 mean_circ: 0.935505
Ran for 89050 frames Cell Events: 2397 mean_circ: 0.935406
Ran for 89550 frames Cell Events: 2407 mean_circ: 0.935432
Ran for 90050 frames Cell Events: 2417 mean_circ: 0.935486
Ran for 90550 frames Cell Events: 2436 mean_circ: 0.935481
Ran for 91050 frames Cell Events: 2442 mean_circ: 0.935453
Ran for 91550 frames Cell Events: 2455 mean_circ: 0.935487
Ran for 92050 frames Cell Events: 2468 mean_circ: 0.935439
Ran for 92550 frames Cell Events: 2489 mean_circ: 0.935457
Ran for 94050 frames Cell Events: 2534 mean_circ: 0.935631
Ran for 94550 frames Cell Events: 2548 mean_circ: 0.935537
Ran for 95050 frames Cell Events: 2565 mean_circ: 0.935569
Ran for 95550 frames Cell Events: 2574 mean_circ: 0.935557
Ran for 96550 frames Cell Events: 2602 mean_circ: 0.935446
Ran for 97050 frames Cell Events: 2611 mean_circ: 0.935445
Ran for 97550 frames Cell Events: 2623 mean_circ: 0.935511
Ran for 98550 frames Cell Events: 2648 mean_circ: 0.935529
Ran for 99050 frames Cell Events: 2662 mean_circ: 0.935514
Ran for 99550 frames Cell Events: 2677 mean_circ: 0.935507
Ran for 100550 frames Cell Events: 2699 mean_circ: 0.935548
Ran for 101550 frames Cell Events: 2722 mean_circ: 0.935635
Ran for 102050 frames Cell Events: 2742 mean_circ: 0.935654
Ran for 102550 frames Cell Events: 2753 mean_circ: 0.93565
Ran for 103050 frames Cell Events: 2762 mean_circ: 0.935604
Ran for 104050 frames Cell Events: 2784 mean_circ: 0.935625
Ran for 105550 frames Cell Events: 2842 mean_circ: 0.935705
Ran for 106050 frames Cell Events: 2860 mean_circ: 0.935665
Ran for 108550 frames Cell Events: 2934 mean_circ: 0.935663
Ran for 109050 frames Cell Events: 2955 mean_circ: 0.935694
Ran for 109550 frames Cell Events: 2977 mean_circ: 0.935743
Ran for 110550 frames Cell Events: 3002 mean_circ: 0.935807
Ran for 111050 frames Cell Events: 3014 mean_circ: 0.935851
Ran for 111550 frames Cell Events: 3034 mean_circ: 0.935761
Ran for 113050 frames Cell Events: 3083 mean_circ: 0.93576
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Ran for 115550 frames Cell Events: 3156 mean_circ: 0.935907
Ran for 116050 frames Cell Events: 3168 mean_circ: 0.935888
Ran for 116550 frames Cell Events: 3184 mean_circ: 0.935969
Ran for 117050 frames Cell Events: 3198 mean_circ: 0.935991
Ran for 117550 frames Cell Events: 3210 mean_circ: 0.935955
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Ran for 119050 frames Cell Events: 3243 mean_circ: 0.936004
Ran for 119550 frames Cell Events: 3259 mean_circ: 0.936038
Ran for 120550 frames Cell Events: 3292 mean_circ: 0.936031
Ran for 121050 frames Cell Events: 3302 mean_circ: 0.936053
Ran for 122550 frames Cell Events: 3330 mean_circ: 0.936053
Ran for 123050 frames Cell Events: 3338 mean_circ: 0.936094
Ran for 124050 frames Cell Events: 3379 mean_circ: 0.936185
Ran for 124550 frames Cell Events: 3394 mean_circ: 0.936258
Ran for 125050 frames Cell Events: 3403 mean_circ: 0.936315
Ran for 126550 frames Cell Events: 3458 mean_circ: 0.936327
Ran for 127050 frames Cell Events: 3470 mean_circ: 0.936271
Ran for 127550 frames Cell Events: 3489 mean_circ: 0.936239
Ran for 128050 frames Cell Events: 3502 mean_circ: 0.936185
Ran for 128550 frames Cell Events: 3514 mean_circ: 0.936209
Ran for 129050 frames Cell Events: 3524 mean_circ: 0.936129
Ran for 129550 frames Cell Events: 3534 mean_circ: 0.936125
Ran for 130050 frames Cell Events: 3552 mean_circ: 0.936069
Ran for 130550 frames Cell Events: 3566 mean_circ: 0.936056
Ran for 131050 frames Cell Events: 3587 mean_circ: 0.936011
Ran for 132050 frames Cell Events: 3620 mean_circ: 0.936029
Ran for 132550 frames Cell Events: 3632 mean_circ: 0.936056
Ran for 133050 frames Cell Events: 3639 mean_circ: 0.936104
Ran for 133550 frames Cell Events: 3658 mean_circ: 0.936084
Ran for 134050 frames Cell Events: 3674 mean_circ: 0.936077
Ran for 134550 frames Cell Events: 3682 mean_circ: 0.936055
Ran for 135550 frames Cell Events: 3714 mean_circ: 0.935925
Ran for 136550 frames Cell Events: 3737 mean_circ: 0.936009
Ran for 137550 frames Cell Events: 3769 mean_circ: 0.936018
Ran for 139050 frames Cell Events: 3804 mean_circ: 0.935795
Ran for 139550 frames Cell Events: 3823 mean_circ: 0.93584
Ran for 140050 frames Cell Events: 3847 mean_circ: 0.935898
Ran for 140550 frames Cell Events: 3858 mean_circ: 0.935917
Ran for 141050 frames Cell Events: 3873 mean_circ: 0.935912
Ran for 141550 frames Cell Events: 3891 mean_circ: 0.935922
Ran for 142050 frames Cell Events: 3914 mean_circ: 0.935981
Ran for 142550 frames Cell Events: 3926 mean_circ: 0.935962
Ran for 143050 frames Cell Events: 3939 mean_circ: 0.936033
Ran for 143550 frames Cell Events: 3961 mean_circ: 0.936035
Ran for 144550 frames Cell Events: 3992 mean_circ: 0.936051
Ran for 145050 frames Cell Events: 4003 mean_circ: 0.935998
Ran for 146550 frames Cell Events: 4052 mean_circ: 0.93599
Ran for 147550 frames Cell Events: 4093 mean_circ: 0.936049
Ran for 148050 frames Cell Events: 4111 mean_circ: 0.936027
Ran for 148550 frames Cell Events: 4117 mean_circ: 0.936018
Ran for 149050 frames Cell Events: 4127 mean_circ: 0.936049
Ran for 149550 frames Cell Events: 4147 mean_circ: 0.936057
Ran for 150050 frames Cell Events: 4160 mean_circ: 0.936068
Ran for 150550 frames Cell Events: 4174 mean_circ: 0.936062
Ran for 151050 frames Cell Events: 4187 mean_circ: 0.936065
Ran for 151550 frames Cell Events: 4200 mean_circ: 0.936021
Ran for 152050 frames Cell Events: 4215 mean_circ: 0.936036
Ran for 153050 frames Cell Events: 4246 mean_circ: 0.936103
Ran for 153550 frames Cell Events: 4265 mean_circ: 0.93603
Ran for 154550 frames Cell Events: 4301 mean_circ: 0.936037
Ran for 155050 frames Cell Events: 4324 mean_circ: 0.935958
Ran for 155550 frames Cell Events: 4338 mean_circ: 0.935946
Ran for 156550 frames Cell Events: 4371 mean_circ: 0.935968
Ran for 157050 frames Cell Events: 4386 mean_circ: 0.93589
Ran for 158050 frames Cell Events: 4419 mean_circ: 0.93589
Ran for 158550 frames Cell Events: 4431 mean_circ: 0.935862
Ran for 159050 frames Cell Events: 4443 mean_circ: 0.935785
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Ran for 161550 frames Cell Events: 4487 mean_circ: 0.935781
Ran for 162050 frames Cell Events: 4504 mean_circ: 0.935808
Ran for 163550 frames Cell Events: 4554 mean_circ: 0.935874
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Ran for 166050 frames Cell Events: 4618 mean_circ: 0.935845
Ran for 166550 frames Cell Events: 4631 mean_circ: 0.935832
Ran for 167550 frames Cell Events: 4654 mean_circ: 0.935853
Ran for 168050 frames Cell Events: 4660 mean_circ: 0.935841
Ran for 169550 frames Cell Events: 4704 mean_circ: 0.935768
Ran for 170550 frames Cell Events: 4728 mean_circ: 0.935837
Ran for 171550 frames Cell Events: 4750 mean_circ: 0.935832
Ran for 172050 frames Cell Events: 4764 mean_circ: 0.935802
Ran for 172550 frames Cell Events: 4780 mean_circ: 0.9358
Ran for 174050 frames Cell Events: 4815 mean_circ: 0.93584
Ran for 174550 frames Cell Events: 4830 mean_circ: 0.935839
Ran for 175550 frames Cell Events: 4872 mean_circ: 0.935783
Ran for 176050 frames Cell Events: 4897 mean_circ: 0.935783
Ran for 177050 frames Cell Events: 4921 mean_circ: 0.935752
Ran for 177550 frames Cell Events: 4931 mean_circ: 0.935782
Ran for 178050 frames Cell Events: 4939 mean_circ: 0.935789
Ran for 178550 frames Cell Events: 4951 mean_circ: 0.935796
Ran for 179050 frames Cell Events: 4963 mean_circ: 0.935853
Ran for 179550 frames Cell Events: 4976 mean_circ: 0.935877
Ran for 181050 frames Cell Events: 5044 mean_circ: 0.935847
Ran for 181550 frames Cell Events: 5055 mean_circ: 0.935789
Ran for 183050 frames Cell Events: 5105 mean_circ: 0.935769
Ran for 184550 frames Cell Events: 5161 mean_circ: 0.935768
Ran for 185050 frames Cell Events: 5177 mean_circ: 0.935804
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Ran for 187050 frames Cell Events: 5240 mean_circ: 0.935728
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Ran for 189550 frames Cell Events: 5304 mean_circ: 0.935732
Ran for 190050 frames Cell Events: 5316 mean_circ: 0.935744
Ran for 190550 frames Cell Events: 5326 mean_circ: 0.935748
Ran for 191050 frames Cell Events: 5344 mean_circ: 0.935752
Ran for 191550 frames Cell Events: 5356 mean_circ: 0.935782
Ran for 192050 frames Cell Events: 5364 mean_circ: 0.9358
Ran for 192550 frames Cell Events: 5376 mean_circ: 0.935809
Ran for 193050 frames Cell Events: 5388 mean_circ: 0.935795
Ran for 194550 frames Cell Events: 5428 mean_circ: 0.935815
Ran for 195050 frames Cell Events: 5452 mean_circ: 0.935729
Ran for 197050 frames Cell Events: 5509 mean_circ: 0.935538
Ran for 197550 frames Cell Events: 5527 mean_circ: 0.935492
Ran for 198050 frames Cell Events: 5539 mean_circ: 0.935486
Ran for 199050 frames Cell Events: 5576 mean_circ: 0.935497
Ran for 199550 frames Cell Events: 5587 mean_circ: 0.935504
Ran for 200050 frames Cell Events: 5598 mean_circ: 0.935459
Ran for 200550 frames Cell Events: 5618 mean_circ: 0.935461
Ran for 201050 frames Cell Events: 5633 mean_circ: 0.93551
Ran for 201550 frames Cell Events: 5647 mean_circ: 0.935457
Ran for 202050 frames Cell Events: 5664 mean_circ: 0.93546
Ran for 202550 frames Cell Events: 5678 mean_circ: 0.935448
Ran for 203050 frames Cell Events: 5689 mean_circ: 0.935476
Ran for 203550 frames Cell Events: 5697 mean_circ: 0.935492
Ran for 204050 frames Cell Events: 5707 mean_circ: 0.935512
Ran for 204550 frames Cell Events: 5729 mean_circ: 0.935522
Ran for 205050 frames Cell Events: 5745 mean_circ: 0.935536
Ran for 205550 frames Cell Events: 5754 mean_circ: 0.935513
Ran for 206050 frames Cell Events: 5771 mean_circ: 0.935538
Ran for 206550 frames Cell Events: 5785 mean_circ: 0.935565
Ran for 207050 frames Cell Events: 5799 mean_circ: 0.935592
Ran for 207550 frames Cell Events: 5816 mean_circ: 0.935631
Ran for 208550 frames Cell Events: 5844 mean_circ: 0.935609
Ran for 210050 frames Cell Events: 5890 mean_circ: 0.935651
Ran for 211050 frames Cell Events: 5923 mean_circ: 0.935659
Ran for 213050 frames Cell Events: 5979 mean_circ: 0.935663
Ran for 213550 frames Cell Events: 6003 mean_circ: 0.935686
Ran for 214050 frames Cell Events: 6021 mean_circ: 0.935708
Ran for 214550 frames Cell Events: 6033 mean_circ: 0.935705
Ran for 215550 frames Cell Events: 6066 mean_circ: 0.935619
Ran for 216050 frames Cell Events: 6077 mean_circ: 0.935578
Ran for 216550 frames Cell Events: 6096 mean_circ: 0.935562
Ran for 217050 frames Cell Events: 6108 mean_circ: 0.935597
Ran for 217550 frames Cell Events: 6121 mean_circ: 0.935627
Ran for 218050 frames Cell Events: 6132 mean_circ: 0.93562
Ran for 218550 frames Cell Events: 6140 mean_circ: 0.935634
Ran for 219050 frames Cell Events: 6159 mean_circ: 0.935652
Ran for 219550 frames Cell Events: 6163 mean_circ: 0.935662
Ran for 220050 frames Cell Events: 6179 mean_circ: 0.935675
Ran for 220550 frames Cell Events: 6194 mean_circ: 0.93564
Ran for 221050 frames Cell Events: 6209 mean_circ: 0.935655
Ran for 222050 frames Cell Events: 6232 mean_circ: 0.935655
Ran for 223050 frames Cell Events: 6269 mean_circ: 0.935621
Ran for 223550 frames Cell Events: 6285 mean_circ: 0.935642
Ran for 224050 frames Cell Events: 6296 mean_circ: 0.935639
Ran for 225050 frames Cell Events: 6336 mean_circ: 0.935676
Ran for 226050 frames Cell Events: 6371 mean_circ: 0.935668
Ran for 226550 frames Cell Events: 6396 mean_circ: 0.935653
Ran for 227050 frames Cell Events: 6408 mean_circ: 0.935588
Ran for 227550 frames Cell Events: 6423 mean_circ: 0.935589
Ran for 228050 frames Cell Events: 6435 mean_circ: 0.935609
Ran for 228550 frames Cell Events: 6448 mean_circ: 0.935596
Ran for 229550 frames Cell Events: 6468 mean_circ: 0.935604
Ran for 230050 frames Cell Events: 6484 mean_circ: 0.935577
Ran for 230550 frames Cell Events: 6496 mean_circ: 0.935565
Ran for 231050 frames Cell Events: 6505 mean_circ: 0.935564
Ran for 231550 frames Cell Events: 6526 mean_circ: 0.935543
Ran for 233050 frames Cell Events: 6580 mean_circ: 0.935499
Ran for 233550 frames Cell Events: 6598 mean_circ: 0.935517
Ran for 234050 frames Cell Events: 6618 mean_circ: 0.935544
Ran for 235550 frames Cell Events: 6669 mean_circ: 0.935524
Ran for 236050 frames Cell Events: 6684 mean_circ: 0.935516
Ran for 238050 frames Cell Events: 6753 mean_circ: 0.935598
Ran for 238550 frames Cell Events: 6769 mean_circ: 0.935585
Ran for 239050 frames Cell Events: 6784 mean_circ: 0.935597
Ran for 240050 frames Cell Events: 6813 mean_circ: 0.93557
Ran for 241550 frames Cell Events: 6864 mean_circ: 0.935619
Ran for 242050 frames Cell Events: 6880 mean_circ: 0.935633
Ran for 242550 frames Cell Events: 6897 mean_circ: 0.935636
Ran for 243050 frames Cell Events: 6908 mean_circ: 0.935643
Ran for 244050 frames Cell Events: 6939 mean_circ: 0.935632
Ran for 245050 frames Cell Events: 6969 mean_circ: 0.935598
Ran for 245550 frames Cell Events: 6982 mean_circ: 0.935602
Ran for 246050 frames Cell Events: 6988 mean_circ: 0.935619
Ran for 246550 frames Cell Events: 7004 mean_circ: 0.935553
Ran for 247050 frames Cell Events: 7015 mean_circ: 0.935566
Ran for 247550 frames Cell Events: 7031 mean_circ: 0.935586
Ran for 248050 frames Cell Events: 7049 mean_circ: 0.93559
Ran for 248550 frames Cell Events: 7069 mean_circ: 0.935582
Ran for 249050 frames Cell Events: 7090 mean_circ: 0.935592
Ran for 249550 frames Cell Events: 7103 mean_circ: 0.935607
Ran for 250050 frames Cell Events: 7118 mean_circ: 0.93564
Ran for 250550 frames Cell Events: 7136 mean_circ: 0.93564
Ran for 251050 frames Cell Events: 7148 mean_circ: 0.935666
Ran for 252050 frames Cell Events: 7186 mean_circ: 0.935706
Ran for 253050 frames Cell Events: 7225 mean_circ: 0.935645
Ran for 254050 frames Cell Events: 7250 mean_circ: 0.93565
Ran for 254550 frames Cell Events: 7263 mean_circ: 0.935665
Ran for 255550 frames Cell Events: 7291 mean_circ: 0.935703
Ran for 256050 frames Cell Events: 7298 mean_circ: 0.935713
Ran for 257050 frames Cell Events: 7325 mean_circ: 0.935708
Ran for 257550 frames Cell Events: 7342 mean_circ: 0.935722
Ran for 258050 frames Cell Events: 7351 mean_circ: 0.935738
Ran for 259050 frames Cell Events: 7379 mean_circ: 0.93572
Ran for 260050 frames Cell Events: 7398 mean_circ: 0.935766
Ran for 260550 frames Cell Events: 7410 mean_circ: 0.935789
Ran for 261550 frames Cell Events: 7444 mean_circ: 0.935764
Ran for 262050 frames Cell Events: 7461 mean_circ: 0.935782
Ran for 262550 frames Cell Events: 7481 mean_circ: 0.935814
Ran for 263050 frames Cell Events: 7503 mean_circ: 0.935818
Ran for 264050 frames Cell Events: 7548 mean_circ: 0.93582
Ran for 264550 frames Cell Events: 7574 mean_circ: 0.935818
Ran for 266550 frames Cell Events: 7636 mean_circ: 0.935824
Ran for 267050 frames Cell Events: 7642 mean_circ: 0.935821
Ran for 267550 frames Cell Events: 7655 mean_circ: 0.935806
Ran for 268050 frames Cell Events: 7666 mean_circ: 0.935775
Ran for 270550 frames Cell Events: 7747 mean_circ: 0.935847
Ran for 271050 frames Cell Events: 7765 mean_circ: 0.9358
Ran for 271550 frames Cell Events: 7782 mean_circ: 0.935774
Ran for 272050 frames Cell Events: 7795 mean_circ: 0.9358
Ran for 272550 frames Cell Events: 7810 mean_circ: 0.935829
Ran for 273050 frames Cell Events: 7823 mean_circ: 0.935824
Ran for 273550 frames Cell Events: 7843 mean_circ: 0.93584
Ran for 274050 frames Cell Events: 7853 mean_circ: 0.935853
Ran for 275050 frames Cell Events: 7884 mean_circ: 0.935867
Ran for 275550 frames Cell Events: 7905 mean_circ: 0.93587
Ran for 276050 frames Cell Events: 7916 mean_circ: 0.935922
Ran for 276550 frames Cell Events: 7927 mean_circ: 0.935921
Ran for 277050 frames Cell Events: 7937 mean_circ: 0.935916
Ran for 278050 frames Cell Events: 7969 mean_circ: 0.935955
Ran for 278550 frames Cell Events: 7977 mean_circ: 0.935935
Ran for 279050 frames Cell Events: 7991 mean_circ: 0.935947
Ran for 280050 frames Cell Events: 8014 mean_circ: 0.935948
Ran for 281550 frames Cell Events: 8086 mean_circ: 0.935926
Ran for 282050 frames Cell Events: 8098 mean_circ: 0.935933
Ran for 283050 frames Cell Events: 8132 mean_circ: 0.935907
Ran for 283550 frames Cell Events: 8147 mean_circ: 0.935913
Ran for 285050 frames Cell Events: 8199 mean_circ: 0.935937
Ran for 286050 frames Cell Events: 8219 mean_circ: 0.935962
Ran for 286550 frames Cell Events: 8230 mean_circ: 0.935972
Ran for 287550 frames Cell Events: 8254 mean_circ: 0.936007
Ran for 288050 frames Cell Events: 8274 mean_circ: 0.936023
Ran for 289050 frames Cell Events: 8303 mean_circ: 0.936041
Ran for 290050 frames Cell Events: 8329 mean_circ: 0.936007
Ran for 290550 frames Cell Events: 8343 mean_circ: 0.935998
Ran for 291050 frames Cell Events: 8353 mean_circ: 0.936012
Ran for 291550 frames Cell Events: 8362 mean_circ: 0.936016
Ran for 292050 frames Cell Events: 8379 mean_circ: 0.936019
Ran for 293050 frames Cell Events: 8414 mean_circ: 0.935991
Ran for 293550 frames Cell Events: 8429 mean_circ: 0.935997
Ran for 294050 frames Cell Events: 8443 mean_circ: 0.935996
Ran for 294550 frames Cell Events: 8455 mean_circ: 0.935998
Ran for 295050 frames Cell Events: 8474 mean_circ: 0.936005
Ran for 295550 frames Cell Events: 8483 mean_circ: 0.936021
Ran for 297050 frames Cell Events: 8545 mean_circ: 0.935973
Ran for 299050 frames Cell Events: 8605 mean_circ: 0.935974
Ran for 299550 frames Cell Events: 8621 mean_circ: 0.935927
Ran for 300550 frames Cell Events: 8664 mean_circ: 0.935974
Ran for 301550 frames Cell Events: 8692 mean_circ: 0.935932
Ran for 303050 frames Cell Events: 8736 mean_circ: 0.935925
Ran for 304050 frames Cell Events: 8760 mean_circ: 0.935914
Ran for 304550 frames Cell Events: 8764 mean_circ: 0.935905
Ran for 305050 frames Cell Events: 8777 mean_circ: 0.935925
Ran for 305550 frames Cell Events: 8793 mean_circ: 0.935937
Ran for 306550 frames Cell Events: 8825 mean_circ: 0.935889
Ran for 307050 frames Cell Events: 8836 mean_circ: 0.935899
Ran for 307550 frames Cell Events: 8849 mean_circ: 0.935888
Ran for 308050 frames Cell Events: 8867 mean_circ: 0.935896
Ran for 308550 frames Cell Events: 8876 mean_circ: 0.935907
Ran for 309550 frames Cell Events: 8908 mean_circ: 0.93592
Ran for 310050 frames Cell Events: 8918 mean_circ: 0.935914
Ran for 310550 frames Cell Events: 8939 mean_circ: 0.935923
Ran for 311050 frames Cell Events: 8952 mean_circ: 0.935937
Ran for 311550 frames Cell Events: 8966 mean_circ: 0.935929
Ran for 312050 frames Cell Events: 8978 mean_circ: 0.935937
Ran for 313050 frames Cell Events: 9016 mean_circ: 0.935947
Ran for 313550 frames Cell Events: 9029 mean_circ: 0.935942
Ran for 314550 frames Cell Events: 9065 mean_circ: 0.935966
Ran for 315050 frames Cell Events: 9078 mean_circ: 0.93598
Ran for 315550 frames Cell Events: 9090 mean_circ: 0.935988
Ran for 316050 frames Cell Events: 9104 mean_circ: 0.935996
Ran for 316550 frames Cell Events: 9131 mean_circ: 0.936001
Ran for 317050 frames Cell Events: 9158 mean_circ: 0.93603
Ran for 318050 frames Cell Events: 9187 mean_circ: 0.935991
Ran for 319050 frames Cell Events: 9214 mean_circ: 0.936027
Ran for 320050 frames Cell Events: 9239 mean_circ: 0.935979
Ran for 321050 frames Cell Events: 9271 mean_circ: 0.936009
Ran for 321550 frames Cell Events: 9290 mean_circ: 0.936009
Ran for 322050 frames Cell Events: 9308 mean_circ: 0.936057
Ran for 323050 frames Cell Events: 9332 mean_circ: 0.936091
Ran for 323550 frames Cell Events: 9342 mean_circ: 0.936075
Ran for 324050 frames Cell Events: 9353 mean_circ: 0.936093
Ran for 324550 frames Cell Events: 9369 mean_circ: 0.936072
Ran for 325050 frames Cell Events: 9386 mean_circ: 0.936081
Ran for 325550 frames Cell Events: 9397 mean_circ: 0.93608
Ran for 326050 frames Cell Events: 9416 mean_circ: 0.936101
Ran for 326550 frames Cell Events: 9427 mean_circ: 0.936102
Ran for 329050 frames Cell Events: 9498 mean_circ: 0.936085
Ran for 329550 frames Cell Events: 9511 mean_circ: 0.936085
Ran for 330050 frames Cell Events: 9526 mean_circ: 0.936027
Ran for 331050 frames Cell Events: 9545 mean_circ: 0.936023
Ran for 331550 frames Cell Events: 9557 mean_circ: 0.936033
Ran for 332050 frames Cell Events: 9578 mean_circ: 0.936046
Ran for 332550 frames Cell Events: 9590 mean_circ: 0.936047
Ran for 333050 frames Cell Events: 9608 mean_circ: 0.936018
Ran for 334050 frames Cell Events: 9629 mean_circ: 0.936009
Ran for 334550 frames Cell Events: 9646 mean_circ: 0.936008
Ran for 335050 frames Cell Events: 9663 mean_circ: 0.936025
Ran for 335550 frames Cell Events: 9681 mean_circ: 0.936043
Ran for 336050 frames Cell Events: 9695 mean_circ: 0.936029
Ran for 336550 frames Cell Events: 9705 mean_circ: 0.936027
Ran for 337050 frames Cell Events: 9716 mean_circ: 0.936025
Ran for 338050 frames Cell Events: 9736 mean_circ: 0.935992
Ran for 338550 frames Cell Events: 9747 mean_circ: 0.936001
Ran for 339050 frames Cell Events: 9762 mean_circ: 0.936006
Ran for 339550 frames Cell Events: 9770 mean_circ: 0.936032
Ran for 340050 frames Cell Events: 9785 mean_circ: 0.936026
Ran for 340550 frames Cell Events: 9801 mean_circ: 0.936009
Ran for 341050 frames Cell Events: 9820 mean_circ: 0.936033
Ran for 342050 frames Cell Events: 9854 mean_circ: 0.936054
Ran for 342550 frames Cell Events: 9869 mean_circ: 0.936065
Ran for 343050 frames Cell Events: 9883 mean_circ: 0.936055
Ran for 344050 frames Cell Events: 9911 mean_circ: 0.936062
Ran for 344550 frames Cell Events: 9924 mean_circ: 0.936026
Ran for 345050 frames Cell Events: 9936 mean_circ: 0.936026
Ran for 346050 frames Cell Events: 9976 mean_circ: 0.936036
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 2.53446e+009
****************************************
Measurement finished
Mean Circularitiy: 0.936038
Mean Area: 645.917
Mean FL-1 intensity: 3444.61
Mean FL-2 intensity: 4777.05
Mean FL-3 intensity: 0
frames processed: 346616
Total Time: 173451ms
Number of Runs (new bg img) 0
Frames collected: 346739
Skipped frames: 25042
Rescued Frames: 3262384
Samples DAQ: 86685000
Samples written: 173369466
Samples per Channel: 86684733
FPS: 1999.06
Samples per second: 499765
Expected samples/s: 500000
Events: 10001
Events per second: 57.659
jumped back (PMT): 27
#Frames read, frequency
# 0 frames :493424
# 1 frames :175292
# 2 frames :6696
# 3 frames :2821
# 4 frames :1646
# 5 frames :938
# 6 frames :1555
# 7 frames :2203
# 8 frames :1650
# 9 frames :972
# 10 frames :1014
# 11 frames :976
# 12 frames :872
# 13 frames :603
# 14 frames :392
# 15 frames :318
# 16 frames :298
# 17 frames :287
# 18 frames :276
# 19 frames :254
# 20 frames :208
# 21 frames :163
# 22 frames :134
# 23 frames :89
# 24 frames :72
# 25 frames :55
# 26 frames :51
# 27 frames :26
# 28 frames :21
# 29 frames :22
# 30 frames :18
# 31 frames :15
# 32 frames :8
# 33 frames :8
# 34 frames :13
# 35 frames :5
# 36 frames :6
# 37 frames :9
# 38 frames :4
# 39 frames :5
# 40 frames :1
# 42 frames :1
# 44 frames :2
# 45 frames :2
# 47 frames :4
# 49 frames :3
# 50 frames :1
# 54 frames :1
# 69 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7015
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0