Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_17.22.48
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "bb4288e49540465883cae86ef3a9fc47",
"name": "M1_20170613_1731_dsRNA_X4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "15:23:08"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8050 (max 8051) in '8050'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7033
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.53851e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 30 mean_circ: 0.929383
Ran for 1550 frames Cell Events: 44 mean_circ: 0.934847
Ran for 2050 frames Cell Events: 58 mean_circ: 0.938606
Ran for 2550 frames Cell Events: 78 mean_circ: 0.939721
Ran for 3050 frames Cell Events: 88 mean_circ: 0.939387
Ran for 3550 frames Cell Events: 103 mean_circ: 0.941869
Ran for 5050 frames Cell Events: 164 mean_circ: 0.944038
Ran for 5550 frames Cell Events: 180 mean_circ: 0.94471
Ran for 7050 frames Cell Events: 224 mean_circ: 0.942749
Ran for 7550 frames Cell Events: 233 mean_circ: 0.943428
Ran for 9050 frames Cell Events: 267 mean_circ: 0.943281
Ran for 9550 frames Cell Events: 282 mean_circ: 0.943641
Ran for 10050 frames Cell Events: 297 mean_circ: 0.943983
Ran for 11050 frames Cell Events: 327 mean_circ: 0.94404
Ran for 11550 frames Cell Events: 333 mean_circ: 0.943849
Ran for 12050 frames Cell Events: 354 mean_circ: 0.943992
Ran for 13050 frames Cell Events: 381 mean_circ: 0.943724
Ran for 14050 frames Cell Events: 415 mean_circ: 0.942902
Ran for 14550 frames Cell Events: 433 mean_circ: 0.942357
Ran for 15050 frames Cell Events: 449 mean_circ: 0.942304
Ran for 15550 frames Cell Events: 458 mean_circ: 0.942452
Ran for 16050 frames Cell Events: 476 mean_circ: 0.942593
Ran for 16550 frames Cell Events: 487 mean_circ: 0.94278
Ran for 17550 frames Cell Events: 517 mean_circ: 0.942882
Ran for 18550 frames Cell Events: 549 mean_circ: 0.943488
Ran for 19050 frames Cell Events: 555 mean_circ: 0.943395
Ran for 19550 frames Cell Events: 573 mean_circ: 0.943133
Ran for 20050 frames Cell Events: 588 mean_circ: 0.943109
Ran for 20550 frames Cell Events: 602 mean_circ: 0.943404
Ran for 21550 frames Cell Events: 626 mean_circ: 0.9436
Ran for 22550 frames Cell Events: 656 mean_circ: 0.943584
Ran for 23050 frames Cell Events: 670 mean_circ: 0.943592
Ran for 23550 frames Cell Events: 679 mean_circ: 0.943505
Ran for 24050 frames Cell Events: 697 mean_circ: 0.94369
Ran for 24550 frames Cell Events: 711 mean_circ: 0.943555
Ran for 26050 frames Cell Events: 754 mean_circ: 0.943551
Ran for 26550 frames Cell Events: 767 mean_circ: 0.943419
Ran for 27050 frames Cell Events: 778 mean_circ: 0.943557
Ran for 27550 frames Cell Events: 795 mean_circ: 0.943666
Ran for 28050 frames Cell Events: 805 mean_circ: 0.943516
Ran for 28550 frames Cell Events: 822 mean_circ: 0.943516
Ran for 29050 frames Cell Events: 848 mean_circ: 0.943197
Ran for 29550 frames Cell Events: 861 mean_circ: 0.943063
Ran for 30550 frames Cell Events: 901 mean_circ: 0.943335
Ran for 31050 frames Cell Events: 911 mean_circ: 0.943276
Ran for 31550 frames Cell Events: 927 mean_circ: 0.943286
Ran for 32050 frames Cell Events: 940 mean_circ: 0.942976
Ran for 32550 frames Cell Events: 953 mean_circ: 0.942791
Ran for 33050 frames Cell Events: 966 mean_circ: 0.943002
Ran for 33550 frames Cell Events: 982 mean_circ: 0.942566
Ran for 34050 frames Cell Events: 996 mean_circ: 0.942818
Ran for 34550 frames Cell Events: 1018 mean_circ: 0.943039
Ran for 35050 frames Cell Events: 1041 mean_circ: 0.942637
Ran for 36050 frames Cell Events: 1080 mean_circ: 0.942402
Ran for 36550 frames Cell Events: 1091 mean_circ: 0.942393
Ran for 37050 frames Cell Events: 1097 mean_circ: 0.94252
Ran for 37550 frames Cell Events: 1099 mean_circ: 0.942536
Ran for 38050 frames Cell Events: 1107 mean_circ: 0.942481
Ran for 38550 frames Cell Events: 1121 mean_circ: 0.942376
Ran for 39550 frames Cell Events: 1147 mean_circ: 0.942643
Ran for 40050 frames Cell Events: 1157 mean_circ: 0.942475
Ran for 41050 frames Cell Events: 1193 mean_circ: 0.942377
Ran for 41550 frames Cell Events: 1210 mean_circ: 0.942369
Ran for 42050 frames Cell Events: 1227 mean_circ: 0.942537
Ran for 42550 frames Cell Events: 1236 mean_circ: 0.942553
Ran for 43050 frames Cell Events: 1249 mean_circ: 0.942417
Ran for 43550 frames Cell Events: 1263 mean_circ: 0.942485
Ran for 44050 frames Cell Events: 1274 mean_circ: 0.942338
Ran for 44550 frames Cell Events: 1288 mean_circ: 0.942446
Ran for 45050 frames Cell Events: 1308 mean_circ: 0.942452
Ran for 46050 frames Cell Events: 1353 mean_circ: 0.94239
Ran for 47050 frames Cell Events: 1373 mean_circ: 0.942155
Ran for 47550 frames Cell Events: 1383 mean_circ: 0.942244
Ran for 48050 frames Cell Events: 1395 mean_circ: 0.942105
Ran for 49050 frames Cell Events: 1420 mean_circ: 0.942024
Ran for 49550 frames Cell Events: 1437 mean_circ: 0.942058
Ran for 50050 frames Cell Events: 1448 mean_circ: 0.942143
Ran for 50550 frames Cell Events: 1457 mean_circ: 0.941972
Ran for 51050 frames Cell Events: 1473 mean_circ: 0.942105
Ran for 51550 frames Cell Events: 1482 mean_circ: 0.941847
Ran for 52550 frames Cell Events: 1528 mean_circ: 0.94198
Ran for 53050 frames Cell Events: 1540 mean_circ: 0.942056
Ran for 54550 frames Cell Events: 1584 mean_circ: 0.941918
Ran for 56050 frames Cell Events: 1626 mean_circ: 0.94171
Ran for 56550 frames Cell Events: 1637 mean_circ: 0.941561
Ran for 59050 frames Cell Events: 1717 mean_circ: 0.941462
Ran for 59550 frames Cell Events: 1727 mean_circ: 0.941543
Ran for 60050 frames Cell Events: 1743 mean_circ: 0.941489
Ran for 61050 frames Cell Events: 1767 mean_circ: 0.94144
Ran for 61550 frames Cell Events: 1781 mean_circ: 0.941432
Ran for 62050 frames Cell Events: 1811 mean_circ: 0.941505
Ran for 62550 frames Cell Events: 1827 mean_circ: 0.941548
Ran for 63050 frames Cell Events: 1843 mean_circ: 0.941605
Ran for 63550 frames Cell Events: 1869 mean_circ: 0.941659
Ran for 64050 frames Cell Events: 1891 mean_circ: 0.941736
Ran for 65050 frames Cell Events: 1918 mean_circ: 0.941713
Ran for 66050 frames Cell Events: 1941 mean_circ: 0.941778
Ran for 67050 frames Cell Events: 1981 mean_circ: 0.941773
Ran for 67550 frames Cell Events: 1991 mean_circ: 0.941805
Ran for 68050 frames Cell Events: 2010 mean_circ: 0.94155
Ran for 68550 frames Cell Events: 2025 mean_circ: 0.941375
Ran for 70050 frames Cell Events: 2067 mean_circ: 0.94139
Ran for 70550 frames Cell Events: 2085 mean_circ: 0.941392
Ran for 71050 frames Cell Events: 2102 mean_circ: 0.941323
Ran for 72050 frames Cell Events: 2127 mean_circ: 0.941486
Ran for 73050 frames Cell Events: 2149 mean_circ: 0.941444
Ran for 73550 frames Cell Events: 2164 mean_circ: 0.941448
Ran for 74050 frames Cell Events: 2186 mean_circ: 0.941483
Ran for 74550 frames Cell Events: 2208 mean_circ: 0.941483
Ran for 75050 frames Cell Events: 2230 mean_circ: 0.94155
Ran for 76050 frames Cell Events: 2266 mean_circ: 0.941483
Ran for 76550 frames Cell Events: 2286 mean_circ: 0.941513
Ran for 77050 frames Cell Events: 2307 mean_circ: 0.941543
Ran for 77550 frames Cell Events: 2319 mean_circ: 0.94158
Ran for 78050 frames Cell Events: 2335 mean_circ: 0.941718
Ran for 78550 frames Cell Events: 2347 mean_circ: 0.941718
Ran for 79050 frames Cell Events: 2364 mean_circ: 0.941757
Ran for 79550 frames Cell Events: 2376 mean_circ: 0.94176
Ran for 80050 frames Cell Events: 2393 mean_circ: 0.941804
Ran for 81050 frames Cell Events: 2416 mean_circ: 0.941807
Ran for 82050 frames Cell Events: 2444 mean_circ: 0.941734
Ran for 83550 frames Cell Events: 2502 mean_circ: 0.941536
Ran for 84550 frames Cell Events: 2545 mean_circ: 0.941757
Ran for 85050 frames Cell Events: 2564 mean_circ: 0.941765
Ran for 86050 frames Cell Events: 2596 mean_circ: 0.941619
Ran for 87050 frames Cell Events: 2631 mean_circ: 0.941711
Ran for 88050 frames Cell Events: 2655 mean_circ: 0.941585
Ran for 88550 frames Cell Events: 2666 mean_circ: 0.941571
Ran for 89050 frames Cell Events: 2681 mean_circ: 0.94156
Ran for 89550 frames Cell Events: 2693 mean_circ: 0.941475
Ran for 90550 frames Cell Events: 2722 mean_circ: 0.941418
Ran for 91050 frames Cell Events: 2734 mean_circ: 0.941385
Ran for 91550 frames Cell Events: 2746 mean_circ: 0.941383
Ran for 92050 frames Cell Events: 2766 mean_circ: 0.941321
Ran for 92550 frames Cell Events: 2777 mean_circ: 0.94132
Ran for 93550 frames Cell Events: 2808 mean_circ: 0.941347
Ran for 94050 frames Cell Events: 2821 mean_circ: 0.941363
Ran for 94550 frames Cell Events: 2832 mean_circ: 0.941396
Ran for 95050 frames Cell Events: 2849 mean_circ: 0.941398
Ran for 95550 frames Cell Events: 2864 mean_circ: 0.941366
Ran for 96550 frames Cell Events: 2895 mean_circ: 0.941332
Ran for 97050 frames Cell Events: 2916 mean_circ: 0.941353
Ran for 99050 frames Cell Events: 2972 mean_circ: 0.941468
Ran for 99550 frames Cell Events: 2988 mean_circ: 0.941464
Ran for 100050 frames Cell Events: 3009 mean_circ: 0.941488
Ran for 100550 frames Cell Events: 3028 mean_circ: 0.941443
Ran for 101050 frames Cell Events: 3039 mean_circ: 0.941438
Ran for 101550 frames Cell Events: 3059 mean_circ: 0.941254
Ran for 102050 frames Cell Events: 3072 mean_circ: 0.941216
Ran for 103550 frames Cell Events: 3125 mean_circ: 0.941178
Ran for 104050 frames Cell Events: 3138 mean_circ: 0.941158
Ran for 104550 frames Cell Events: 3152 mean_circ: 0.941228
Ran for 105550 frames Cell Events: 3182 mean_circ: 0.941132
Ran for 106050 frames Cell Events: 3199 mean_circ: 0.941159
Ran for 106550 frames Cell Events: 3210 mean_circ: 0.941163
Ran for 107050 frames Cell Events: 3225 mean_circ: 0.941138
Ran for 107550 frames Cell Events: 3246 mean_circ: 0.941171
Ran for 108550 frames Cell Events: 3267 mean_circ: 0.941108
Ran for 109550 frames Cell Events: 3294 mean_circ: 0.940971
Ran for 110050 frames Cell Events: 3306 mean_circ: 0.940971
Ran for 110550 frames Cell Events: 3320 mean_circ: 0.94104
Ran for 111550 frames Cell Events: 3359 mean_circ: 0.941077
Ran for 112050 frames Cell Events: 3389 mean_circ: 0.941099
Ran for 112550 frames Cell Events: 3407 mean_circ: 0.941028
Ran for 113050 frames Cell Events: 3428 mean_circ: 0.940977
Ran for 113550 frames Cell Events: 3446 mean_circ: 0.941046
Ran for 114050 frames Cell Events: 3463 mean_circ: 0.941073
Ran for 116050 frames Cell Events: 3532 mean_circ: 0.940983
Ran for 116550 frames Cell Events: 3546 mean_circ: 0.940925
Ran for 117050 frames Cell Events: 3562 mean_circ: 0.940924
Ran for 118550 frames Cell Events: 3610 mean_circ: 0.940914
Ran for 119050 frames Cell Events: 3632 mean_circ: 0.940917
Ran for 119550 frames Cell Events: 3655 mean_circ: 0.940967
Ran for 120050 frames Cell Events: 3663 mean_circ: 0.940951
Ran for 121050 frames Cell Events: 3693 mean_circ: 0.940978
Ran for 122550 frames Cell Events: 3749 mean_circ: 0.940848
Ran for 123050 frames Cell Events: 3760 mean_circ: 0.940852
Ran for 124050 frames Cell Events: 3785 mean_circ: 0.940796
Ran for 125050 frames Cell Events: 3812 mean_circ: 0.940819
Ran for 125550 frames Cell Events: 3825 mean_circ: 0.940743
Ran for 126550 frames Cell Events: 3873 mean_circ: 0.940708
Ran for 127550 frames Cell Events: 3912 mean_circ: 0.940626
Ran for 129550 frames Cell Events: 3984 mean_circ: 0.940678
Ran for 130050 frames Cell Events: 3997 mean_circ: 0.940608
Ran for 130550 frames Cell Events: 4009 mean_circ: 0.940561
Ran for 131050 frames Cell Events: 4019 mean_circ: 0.940536
Ran for 131550 frames Cell Events: 4031 mean_circ: 0.940524
Ran for 132550 frames Cell Events: 4085 mean_circ: 0.94044
Ran for 133050 frames Cell Events: 4108 mean_circ: 0.940443
Ran for 134050 frames Cell Events: 4150 mean_circ: 0.940417
Ran for 134550 frames Cell Events: 4169 mean_circ: 0.940371
Ran for 135050 frames Cell Events: 4188 mean_circ: 0.940359
Ran for 136050 frames Cell Events: 4232 mean_circ: 0.940394
Ran for 137550 frames Cell Events: 4296 mean_circ: 0.94038
Ran for 138050 frames Cell Events: 4315 mean_circ: 0.940407
Ran for 138550 frames Cell Events: 4328 mean_circ: 0.940407
Ran for 139050 frames Cell Events: 4341 mean_circ: 0.940418
Ran for 139550 frames Cell Events: 4364 mean_circ: 0.940437
Ran for 140550 frames Cell Events: 4402 mean_circ: 0.94048
Ran for 141050 frames Cell Events: 4420 mean_circ: 0.940522
Ran for 143050 frames Cell Events: 4484 mean_circ: 0.940662
Ran for 143550 frames Cell Events: 4498 mean_circ: 0.940645
Ran for 144050 frames Cell Events: 4519 mean_circ: 0.940651
Ran for 144550 frames Cell Events: 4535 mean_circ: 0.940668
Ran for 145050 frames Cell Events: 4555 mean_circ: 0.940685
Ran for 145550 frames Cell Events: 4573 mean_circ: 0.940713
Ran for 149050 frames Cell Events: 4706 mean_circ: 0.940663
Ran for 149550 frames Cell Events: 4731 mean_circ: 0.940669
Ran for 150050 frames Cell Events: 4756 mean_circ: 0.940702
Ran for 152050 frames Cell Events: 4821 mean_circ: 0.940614
Ran for 152550 frames Cell Events: 4831 mean_circ: 0.940649
Ran for 154550 frames Cell Events: 4912 mean_circ: 0.940463
Ran for 155550 frames Cell Events: 4940 mean_circ: 0.940516
Ran for 156550 frames Cell Events: 4981 mean_circ: 0.940493
Ran for 157550 frames Cell Events: 5011 mean_circ: 0.940471
Ran for 158050 frames Cell Events: 5024 mean_circ: 0.940441
Ran for 158550 frames Cell Events: 5032 mean_circ: 0.940459
Ran for 159550 frames Cell Events: 5062 mean_circ: 0.940411
Ran for 160050 frames Cell Events: 5071 mean_circ: 0.940414
Ran for 160550 frames Cell Events: 5090 mean_circ: 0.940419
Ran for 161050 frames Cell Events: 5100 mean_circ: 0.940466
Ran for 162050 frames Cell Events: 5129 mean_circ: 0.9405
Ran for 162550 frames Cell Events: 5137 mean_circ: 0.940511
Ran for 163050 frames Cell Events: 5152 mean_circ: 0.940549
Ran for 163550 frames Cell Events: 5165 mean_circ: 0.940585
Ran for 164050 frames Cell Events: 5178 mean_circ: 0.940533
Ran for 164550 frames Cell Events: 5201 mean_circ: 0.940548
Ran for 165050 frames Cell Events: 5211 mean_circ: 0.940483
Ran for 165550 frames Cell Events: 5223 mean_circ: 0.940461
Ran for 166050 frames Cell Events: 5239 mean_circ: 0.940482
Ran for 167050 frames Cell Events: 5287 mean_circ: 0.940528
Ran for 167550 frames Cell Events: 5311 mean_circ: 0.940528
Ran for 168550 frames Cell Events: 5347 mean_circ: 0.940499
Ran for 169050 frames Cell Events: 5368 mean_circ: 0.94049
Ran for 169550 frames Cell Events: 5381 mean_circ: 0.940463
Ran for 170050 frames Cell Events: 5394 mean_circ: 0.940466
Ran for 170550 frames Cell Events: 5404 mean_circ: 0.940468
Ran for 172550 frames Cell Events: 5472 mean_circ: 0.940502
Ran for 173050 frames Cell Events: 5497 mean_circ: 0.940472
Ran for 174050 frames Cell Events: 5533 mean_circ: 0.940469
Ran for 175050 frames Cell Events: 5577 mean_circ: 0.940502
Ran for 175550 frames Cell Events: 5600 mean_circ: 0.940529
Ran for 176550 frames Cell Events: 5633 mean_circ: 0.940551
Ran for 178050 frames Cell Events: 5688 mean_circ: 0.940592
Ran for 179050 frames Cell Events: 5719 mean_circ: 0.940616
Ran for 179550 frames Cell Events: 5732 mean_circ: 0.940615
Ran for 180550 frames Cell Events: 5747 mean_circ: 0.940618
Ran for 181050 frames Cell Events: 5758 mean_circ: 0.940605
Ran for 182550 frames Cell Events: 5810 mean_circ: 0.940617
Ran for 183050 frames Cell Events: 5834 mean_circ: 0.940594
Ran for 184050 frames Cell Events: 5879 mean_circ: 0.940585
Ran for 185550 frames Cell Events: 5945 mean_circ: 0.940587
Ran for 186050 frames Cell Events: 5958 mean_circ: 0.940599
Ran for 187050 frames Cell Events: 5965 mean_circ: 0.940606
Ran for 187550 frames Cell Events: 5978 mean_circ: 0.940624
Ran for 188050 frames Cell Events: 5982 mean_circ: 0.940629
Ran for 190050 frames Cell Events: 6064 mean_circ: 0.940517
Ran for 190550 frames Cell Events: 6087 mean_circ: 0.940527
Ran for 191050 frames Cell Events: 6105 mean_circ: 0.940502
Ran for 191550 frames Cell Events: 6120 mean_circ: 0.940538
Ran for 193050 frames Cell Events: 6176 mean_circ: 0.940495
Ran for 193550 frames Cell Events: 6187 mean_circ: 0.940487
Ran for 194050 frames Cell Events: 6218 mean_circ: 0.940403
Ran for 194550 frames Cell Events: 6229 mean_circ: 0.940382
Ran for 195050 frames Cell Events: 6249 mean_circ: 0.940341
Ran for 195550 frames Cell Events: 6274 mean_circ: 0.940293
Ran for 196050 frames Cell Events: 6291 mean_circ: 0.940256
Ran for 197050 frames Cell Events: 6324 mean_circ: 0.940282
Ran for 198050 frames Cell Events: 6361 mean_circ: 0.940248
Ran for 198550 frames Cell Events: 6381 mean_circ: 0.940219
Ran for 199050 frames Cell Events: 6394 mean_circ: 0.94025
Ran for 199550 frames Cell Events: 6406 mean_circ: 0.940263
Ran for 200050 frames Cell Events: 6422 mean_circ: 0.940231
Ran for 200550 frames Cell Events: 6441 mean_circ: 0.940202
Ran for 202050 frames Cell Events: 6498 mean_circ: 0.940218
Ran for 203050 frames Cell Events: 6549 mean_circ: 0.940212
Ran for 203550 frames Cell Events: 6563 mean_circ: 0.940217
Ran for 204050 frames Cell Events: 6586 mean_circ: 0.940238
Ran for 204550 frames Cell Events: 6596 mean_circ: 0.940212
Ran for 205550 frames Cell Events: 6632 mean_circ: 0.94021
Ran for 206050 frames Cell Events: 6658 mean_circ: 0.940204
Ran for 206550 frames Cell Events: 6679 mean_circ: 0.940215
Ran for 207550 frames Cell Events: 6722 mean_circ: 0.940251
Ran for 208050 frames Cell Events: 6735 mean_circ: 0.940209
Ran for 209550 frames Cell Events: 6800 mean_circ: 0.94018
Ran for 210050 frames Cell Events: 6819 mean_circ: 0.940195
Ran for 211050 frames Cell Events: 6855 mean_circ: 0.940113
Ran for 211550 frames Cell Events: 6877 mean_circ: 0.940138
Ran for 212050 frames Cell Events: 6903 mean_circ: 0.940159
Ran for 212550 frames Cell Events: 6923 mean_circ: 0.940161
Ran for 214050 frames Cell Events: 6975 mean_circ: 0.940186
Ran for 214550 frames Cell Events: 6996 mean_circ: 0.940163
Ran for 215050 frames Cell Events: 7017 mean_circ: 0.940119
Ran for 216050 frames Cell Events: 7053 mean_circ: 0.940133
Ran for 217050 frames Cell Events: 7095 mean_circ: 0.940087
Ran for 219550 frames Cell Events: 7191 mean_circ: 0.940201
Ran for 220550 frames Cell Events: 7243 mean_circ: 0.940196
Ran for 221050 frames Cell Events: 7269 mean_circ: 0.940229
Ran for 222550 frames Cell Events: 7316 mean_circ: 0.940211
Ran for 224050 frames Cell Events: 7352 mean_circ: 0.940249
Ran for 224550 frames Cell Events: 7375 mean_circ: 0.940236
Ran for 225550 frames Cell Events: 7419 mean_circ: 0.940258
Ran for 226050 frames Cell Events: 7442 mean_circ: 0.940274
Ran for 226550 frames Cell Events: 7461 mean_circ: 0.940266
Ran for 227050 frames Cell Events: 7482 mean_circ: 0.940266
Ran for 227550 frames Cell Events: 7501 mean_circ: 0.940212
Ran for 228550 frames Cell Events: 7537 mean_circ: 0.940187
Ran for 229550 frames Cell Events: 7575 mean_circ: 0.940178
Ran for 230050 frames Cell Events: 7594 mean_circ: 0.940184
Ran for 231050 frames Cell Events: 7632 mean_circ: 0.940223
Ran for 231550 frames Cell Events: 7661 mean_circ: 0.940217
Ran for 233050 frames Cell Events: 7737 mean_circ: 0.94018
Ran for 234550 frames Cell Events: 7812 mean_circ: 0.940144
Ran for 235050 frames Cell Events: 7831 mean_circ: 0.940102
Ran for 235550 frames Cell Events: 7855 mean_circ: 0.940099
Ran for 236050 frames Cell Events: 7871 mean_circ: 0.940099
Ran for 236550 frames Cell Events: 7890 mean_circ: 0.940119
Ran for 237050 frames Cell Events: 7913 mean_circ: 0.940109
Ran for 238550 frames Cell Events: 7990 mean_circ: 0.940136
Ran for 239550 frames Cell Events: 8032 mean_circ: 0.940165
End this measurment..
Stopping time: 2.53863e+009
****************************************
Measurement finished
Mean Circularitiy: 0.940172
Mean Area: 662.15
Mean FL-1 intensity: 3120.59
Mean FL-2 intensity: 3720.81
Mean FL-3 intensity: 0
frames processed: 237712
Total Time: 120028ms
Number of Runs (new bg img) 0
Frames collected: 239924
Skipped frames: 38508
Rescued Frames: 4140425
Samples DAQ: 59980939
Samples written: 119961778
Samples per Channel: 59980889
FPS: 1998.9
Samples per second: 499723
Expected samples/s: 500000
Events: 8051
Events per second: 67.0759
jumped back (PMT): 4844
#Frames read, frequency
# 0 frames :343477
# 1 frames :118373
# 2 frames :5042
# 3 frames :1869
# 4 frames :1102
# 5 frames :572
# 6 frames :1044
# 7 frames :1873
# 8 frames :1532
# 9 frames :1043
# 10 frames :733
# 11 frames :481
# 12 frames :445
# 13 frames :326
# 14 frames :317
# 15 frames :245
# 16 frames :192
# 17 frames :167
# 18 frames :144
# 19 frames :114
# 20 frames :82
# 21 frames :75
# 22 frames :57
# 23 frames :40
# 24 frames :34
# 25 frames :24
# 26 frames :33
# 27 frames :20
# 28 frames :25
# 29 frames :22
# 30 frames :19
# 31 frames :12
# 32 frames :12
# 33 frames :13
# 34 frames :9
# 35 frames :7
# 36 frames :8
# 37 frames :6
# 38 frames :8
# 39 frames :11
# 40 frames :8
# 41 frames :5
# 42 frames :2
# 43 frames :2
# 44 frames :1
# 45 frames :3
# 46 frames :6
# 47 frames :3
# 51 frames :1
# 52 frames :3
# 54 frames :1
# 57 frames :2
# 58 frames :1
# 61 frames :2
# 64 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7033
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0