Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_17.52.34
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "6df1e8e889358640fcd8ce2c3ef52b53",
"name": "M1_20170615_1730_dsRNA_W7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "15:52:56"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8719 (max 8720) in '8719'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.509
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.3796e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 39 mean_circ: 0.9484
Ran for 4550 frames Cell Events: 276 mean_circ: 0.94263
Ran for 5550 frames Cell Events: 331 mean_circ: 0.943423
Ran for 6050 frames Cell Events: 369 mean_circ: 0.94385
Ran for 6550 frames Cell Events: 396 mean_circ: 0.943312
Ran for 7050 frames Cell Events: 433 mean_circ: 0.943429
Ran for 7550 frames Cell Events: 463 mean_circ: 0.943255
Ran for 8550 frames Cell Events: 499 mean_circ: 0.943598
Ran for 9050 frames Cell Events: 522 mean_circ: 0.943771
Ran for 9550 frames Cell Events: 555 mean_circ: 0.943791
Ran for 10050 frames Cell Events: 572 mean_circ: 0.943688
Ran for 11050 frames Cell Events: 608 mean_circ: 0.944474
Ran for 11550 frames Cell Events: 623 mean_circ: 0.944839
Ran for 13050 frames Cell Events: 679 mean_circ: 0.945516
Ran for 13550 frames Cell Events: 702 mean_circ: 0.945703
Ran for 14050 frames Cell Events: 729 mean_circ: 0.945923
Ran for 14550 frames Cell Events: 757 mean_circ: 0.945779
Ran for 15050 frames Cell Events: 772 mean_circ: 0.945834
Ran for 15550 frames Cell Events: 790 mean_circ: 0.946022
Ran for 16550 frames Cell Events: 840 mean_circ: 0.945532
Ran for 17550 frames Cell Events: 875 mean_circ: 0.945264
Ran for 18050 frames Cell Events: 885 mean_circ: 0.945333
Ran for 18550 frames Cell Events: 904 mean_circ: 0.945393
Ran for 19050 frames Cell Events: 927 mean_circ: 0.945479
Ran for 19550 frames Cell Events: 962 mean_circ: 0.945445
Ran for 20050 frames Cell Events: 984 mean_circ: 0.945574
Ran for 20550 frames Cell Events: 1001 mean_circ: 0.945759
Ran for 21050 frames Cell Events: 1009 mean_circ: 0.945581
Ran for 21550 frames Cell Events: 1034 mean_circ: 0.945893
Ran for 22050 frames Cell Events: 1058 mean_circ: 0.94596
Ran for 23050 frames Cell Events: 1085 mean_circ: 0.946048
Ran for 23550 frames Cell Events: 1106 mean_circ: 0.945764
Ran for 24050 frames Cell Events: 1124 mean_circ: 0.945782
Ran for 24550 frames Cell Events: 1143 mean_circ: 0.945757
Ran for 25050 frames Cell Events: 1162 mean_circ: 0.945703
Ran for 26050 frames Cell Events: 1193 mean_circ: 0.945698
Ran for 26550 frames Cell Events: 1213 mean_circ: 0.945518
Ran for 27550 frames Cell Events: 1237 mean_circ: 0.945657
Ran for 28550 frames Cell Events: 1276 mean_circ: 0.945893
Ran for 29050 frames Cell Events: 1283 mean_circ: 0.945957
Ran for 29550 frames Cell Events: 1296 mean_circ: 0.945955
Ran for 30050 frames Cell Events: 1315 mean_circ: 0.946092
Ran for 30550 frames Cell Events: 1323 mean_circ: 0.94605
Ran for 31050 frames Cell Events: 1336 mean_circ: 0.9462
Ran for 31550 frames Cell Events: 1353 mean_circ: 0.946257
Ran for 33050 frames Cell Events: 1391 mean_circ: 0.94633
Ran for 33550 frames Cell Events: 1418 mean_circ: 0.946513
Ran for 34050 frames Cell Events: 1433 mean_circ: 0.946485
Ran for 35050 frames Cell Events: 1456 mean_circ: 0.946487
Ran for 35550 frames Cell Events: 1469 mean_circ: 0.946629
Ran for 36050 frames Cell Events: 1484 mean_circ: 0.946774
Ran for 36550 frames Cell Events: 1500 mean_circ: 0.946808
Ran for 37050 frames Cell Events: 1515 mean_circ: 0.946703
Ran for 37550 frames Cell Events: 1534 mean_circ: 0.946835
Ran for 38050 frames Cell Events: 1546 mean_circ: 0.946697
Ran for 40050 frames Cell Events: 1630 mean_circ: 0.947119
Ran for 41550 frames Cell Events: 1711 mean_circ: 0.94763
Ran for 42050 frames Cell Events: 1731 mean_circ: 0.94761
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Ran for 43550 frames Cell Events: 1793 mean_circ: 0.947923
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Ran for 46050 frames Cell Events: 1888 mean_circ: 0.947909
Ran for 46550 frames Cell Events: 1913 mean_circ: 0.948027
Ran for 47050 frames Cell Events: 1928 mean_circ: 0.948012
Ran for 47550 frames Cell Events: 1939 mean_circ: 0.948053
Ran for 48550 frames Cell Events: 1971 mean_circ: 0.948175
Ran for 49050 frames Cell Events: 1983 mean_circ: 0.948257
Ran for 49550 frames Cell Events: 2010 mean_circ: 0.948361
Ran for 50050 frames Cell Events: 2026 mean_circ: 0.948434
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Ran for 52050 frames Cell Events: 2091 mean_circ: 0.948374
Ran for 54050 frames Cell Events: 2155 mean_circ: 0.948474
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Ran for 55050 frames Cell Events: 2180 mean_circ: 0.948534
Ran for 55550 frames Cell Events: 2195 mean_circ: 0.948576
Ran for 56550 frames Cell Events: 2218 mean_circ: 0.948574
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Ran for 58050 frames Cell Events: 2266 mean_circ: 0.948478
Ran for 58550 frames Cell Events: 2275 mean_circ: 0.948532
Ran for 60050 frames Cell Events: 2318 mean_circ: 0.948672
Ran for 61050 frames Cell Events: 2361 mean_circ: 0.948765
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Ran for 62050 frames Cell Events: 2393 mean_circ: 0.948708
Ran for 62550 frames Cell Events: 2409 mean_circ: 0.948724
Ran for 63550 frames Cell Events: 2444 mean_circ: 0.948788
Ran for 64550 frames Cell Events: 2473 mean_circ: 0.948748
Ran for 65050 frames Cell Events: 2489 mean_circ: 0.948846
Ran for 65550 frames Cell Events: 2509 mean_circ: 0.948913
Ran for 66050 frames Cell Events: 2521 mean_circ: 0.948962
Ran for 66550 frames Cell Events: 2541 mean_circ: 0.949009
Ran for 67050 frames Cell Events: 2561 mean_circ: 0.949046
Ran for 68050 frames Cell Events: 2602 mean_circ: 0.949033
Ran for 68550 frames Cell Events: 2614 mean_circ: 0.949112
Ran for 69050 frames Cell Events: 2634 mean_circ: 0.949146
Ran for 69550 frames Cell Events: 2647 mean_circ: 0.94914
Ran for 70050 frames Cell Events: 2661 mean_circ: 0.949135
Ran for 70550 frames Cell Events: 2671 mean_circ: 0.949113
Ran for 71050 frames Cell Events: 2686 mean_circ: 0.949139
Ran for 72550 frames Cell Events: 2744 mean_circ: 0.949105
Ran for 73050 frames Cell Events: 2758 mean_circ: 0.949149
Ran for 74050 frames Cell Events: 2790 mean_circ: 0.949246
Ran for 74550 frames Cell Events: 2805 mean_circ: 0.949275
Ran for 75550 frames Cell Events: 2843 mean_circ: 0.949227
Ran for 76550 frames Cell Events: 2865 mean_circ: 0.949291
Ran for 77550 frames Cell Events: 2902 mean_circ: 0.949222
Ran for 78050 frames Cell Events: 2917 mean_circ: 0.949122
Ran for 78550 frames Cell Events: 2942 mean_circ: 0.949085
Ran for 79050 frames Cell Events: 2968 mean_circ: 0.949101
Ran for 79550 frames Cell Events: 2987 mean_circ: 0.949104
Ran for 80550 frames Cell Events: 3017 mean_circ: 0.949151
Ran for 81550 frames Cell Events: 3055 mean_circ: 0.949239
Ran for 82050 frames Cell Events: 3081 mean_circ: 0.949213
Ran for 82550 frames Cell Events: 3094 mean_circ: 0.949221
Ran for 83050 frames Cell Events: 3114 mean_circ: 0.949249
Ran for 84050 frames Cell Events: 3139 mean_circ: 0.949238
Ran for 84550 frames Cell Events: 3165 mean_circ: 0.949235
Ran for 85550 frames Cell Events: 3206 mean_circ: 0.949244
Ran for 86050 frames Cell Events: 3223 mean_circ: 0.949282
Ran for 87050 frames Cell Events: 3281 mean_circ: 0.949301
Ran for 88050 frames Cell Events: 3331 mean_circ: 0.949251
Ran for 88550 frames Cell Events: 3345 mean_circ: 0.94931
Ran for 89050 frames Cell Events: 3356 mean_circ: 0.949319
Ran for 91550 frames Cell Events: 3497 mean_circ: 0.949418
Ran for 92050 frames Cell Events: 3528 mean_circ: 0.949413
Ran for 92550 frames Cell Events: 3540 mean_circ: 0.949387
Ran for 93050 frames Cell Events: 3561 mean_circ: 0.949395
Ran for 93550 frames Cell Events: 3595 mean_circ: 0.949424
Ran for 94050 frames Cell Events: 3637 mean_circ: 0.94926
Ran for 95050 frames Cell Events: 3696 mean_circ: 0.949151
Ran for 96050 frames Cell Events: 3735 mean_circ: 0.948949
Ran for 96550 frames Cell Events: 3747 mean_circ: 0.948926
Ran for 97050 frames Cell Events: 3761 mean_circ: 0.948959
Ran for 97550 frames Cell Events: 3770 mean_circ: 0.94896
Ran for 98550 frames Cell Events: 3813 mean_circ: 0.949035
Ran for 99050 frames Cell Events: 3827 mean_circ: 0.949008
Ran for 99550 frames Cell Events: 3838 mean_circ: 0.948976
Ran for 100050 frames Cell Events: 3846 mean_circ: 0.948959
Ran for 101050 frames Cell Events: 3885 mean_circ: 0.94898
Ran for 101550 frames Cell Events: 3902 mean_circ: 0.949013
Ran for 102550 frames Cell Events: 3938 mean_circ: 0.94899
Ran for 103050 frames Cell Events: 3963 mean_circ: 0.949045
Ran for 103550 frames Cell Events: 3993 mean_circ: 0.948997
Ran for 104050 frames Cell Events: 4007 mean_circ: 0.948985
Ran for 104550 frames Cell Events: 4030 mean_circ: 0.948983
Ran for 105550 frames Cell Events: 4094 mean_circ: 0.948889
Ran for 106050 frames Cell Events: 4114 mean_circ: 0.948934
Ran for 106550 frames Cell Events: 4126 mean_circ: 0.948957
Ran for 107050 frames Cell Events: 4148 mean_circ: 0.949037
Ran for 107550 frames Cell Events: 4157 mean_circ: 0.949023
Ran for 109050 frames Cell Events: 4257 mean_circ: 0.9491
Ran for 112050 frames Cell Events: 4419 mean_circ: 0.949183
Ran for 113550 frames Cell Events: 4477 mean_circ: 0.949256
Ran for 114050 frames Cell Events: 4488 mean_circ: 0.949269
Ran for 115050 frames Cell Events: 4520 mean_circ: 0.949225
Ran for 115550 frames Cell Events: 4536 mean_circ: 0.949228
Ran for 116050 frames Cell Events: 4558 mean_circ: 0.949219
Ran for 116550 frames Cell Events: 4574 mean_circ: 0.949241
Ran for 117550 frames Cell Events: 4608 mean_circ: 0.949256
Ran for 119050 frames Cell Events: 4655 mean_circ: 0.949265
Ran for 119550 frames Cell Events: 4659 mean_circ: 0.949284
Ran for 120050 frames Cell Events: 4677 mean_circ: 0.949332
Ran for 120550 frames Cell Events: 4687 mean_circ: 0.949351
Ran for 121050 frames Cell Events: 4698 mean_circ: 0.949343
Ran for 121550 frames Cell Events: 4711 mean_circ: 0.949373
Ran for 122050 frames Cell Events: 4722 mean_circ: 0.94938
Ran for 122550 frames Cell Events: 4734 mean_circ: 0.94936
Ran for 123050 frames Cell Events: 4753 mean_circ: 0.949375
Ran for 123550 frames Cell Events: 4768 mean_circ: 0.949339
Ran for 124050 frames Cell Events: 4783 mean_circ: 0.949331
Ran for 124550 frames Cell Events: 4796 mean_circ: 0.949315
Ran for 126050 frames Cell Events: 4835 mean_circ: 0.949351
Ran for 127050 frames Cell Events: 4865 mean_circ: 0.949353
Ran for 127550 frames Cell Events: 4877 mean_circ: 0.949317
Ran for 128050 frames Cell Events: 4897 mean_circ: 0.949362
Ran for 129050 frames Cell Events: 4926 mean_circ: 0.949282
Ran for 130550 frames Cell Events: 4975 mean_circ: 0.949227
Ran for 131050 frames Cell Events: 4985 mean_circ: 0.949252
Ran for 132050 frames Cell Events: 5014 mean_circ: 0.949267
Ran for 133050 frames Cell Events: 5034 mean_circ: 0.94926
Ran for 133550 frames Cell Events: 5052 mean_circ: 0.949253
Ran for 134050 frames Cell Events: 5068 mean_circ: 0.949285
Ran for 135550 frames Cell Events: 5117 mean_circ: 0.949332
Ran for 136550 frames Cell Events: 5149 mean_circ: 0.949364
Ran for 137550 frames Cell Events: 5184 mean_circ: 0.949325
Ran for 140050 frames Cell Events: 5276 mean_circ: 0.949315
Ran for 140550 frames Cell Events: 5288 mean_circ: 0.949299
Ran for 141050 frames Cell Events: 5305 mean_circ: 0.949323
Ran for 141550 frames Cell Events: 5319 mean_circ: 0.949321
Ran for 142050 frames Cell Events: 5329 mean_circ: 0.949327
Ran for 143050 frames Cell Events: 5365 mean_circ: 0.949369
Ran for 143550 frames Cell Events: 5386 mean_circ: 0.94938
Ran for 144550 frames Cell Events: 5417 mean_circ: 0.949379
Ran for 145050 frames Cell Events: 5436 mean_circ: 0.949405
Ran for 145550 frames Cell Events: 5455 mean_circ: 0.949425
Ran for 147550 frames Cell Events: 5529 mean_circ: 0.949482
Ran for 148050 frames Cell Events: 5549 mean_circ: 0.949485
Ran for 148550 frames Cell Events: 5556 mean_circ: 0.9495
Ran for 149050 frames Cell Events: 5568 mean_circ: 0.949497
Ran for 149550 frames Cell Events: 5588 mean_circ: 0.94949
Ran for 152050 frames Cell Events: 5656 mean_circ: 0.949535
Ran for 152550 frames Cell Events: 5671 mean_circ: 0.949535
Ran for 154050 frames Cell Events: 5728 mean_circ: 0.949524
Ran for 154550 frames Cell Events: 5736 mean_circ: 0.94955
Ran for 155550 frames Cell Events: 5765 mean_circ: 0.949538
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Ran for 157550 frames Cell Events: 5828 mean_circ: 0.949556
Ran for 158550 frames Cell Events: 5859 mean_circ: 0.949525
Ran for 159050 frames Cell Events: 5873 mean_circ: 0.94953
Ran for 159550 frames Cell Events: 5889 mean_circ: 0.949544
Ran for 160050 frames Cell Events: 5901 mean_circ: 0.949539
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Ran for 161050 frames Cell Events: 5935 mean_circ: 0.949563
Ran for 161550 frames Cell Events: 5946 mean_circ: 0.949574
Ran for 162050 frames Cell Events: 5957 mean_circ: 0.949543
Ran for 162550 frames Cell Events: 5965 mean_circ: 0.949525
Ran for 163550 frames Cell Events: 5996 mean_circ: 0.949438
Ran for 164050 frames Cell Events: 6010 mean_circ: 0.949485
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Ran for 166550 frames Cell Events: 6093 mean_circ: 0.949453
Ran for 167050 frames Cell Events: 6105 mean_circ: 0.949424
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Ran for 168050 frames Cell Events: 6145 mean_circ: 0.949412
Ran for 168550 frames Cell Events: 6160 mean_circ: 0.949394
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Ran for 170550 frames Cell Events: 6226 mean_circ: 0.949313
Ran for 171050 frames Cell Events: 6244 mean_circ: 0.949318
Ran for 171550 frames Cell Events: 6259 mean_circ: 0.9493
Ran for 172050 frames Cell Events: 6279 mean_circ: 0.949287
Ran for 172550 frames Cell Events: 6296 mean_circ: 0.949312
Ran for 173050 frames Cell Events: 6307 mean_circ: 0.94929
Ran for 174050 frames Cell Events: 6347 mean_circ: 0.949347
Ran for 175050 frames Cell Events: 6379 mean_circ: 0.949311
Ran for 175550 frames Cell Events: 6391 mean_circ: 0.94934
Ran for 176050 frames Cell Events: 6413 mean_circ: 0.949345
Ran for 176550 frames Cell Events: 6423 mean_circ: 0.949351
Ran for 177550 frames Cell Events: 6463 mean_circ: 0.949365
Ran for 178550 frames Cell Events: 6507 mean_circ: 0.949357
Ran for 179050 frames Cell Events: 6521 mean_circ: 0.949362
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Ran for 180050 frames Cell Events: 6552 mean_circ: 0.949309
Ran for 180550 frames Cell Events: 6564 mean_circ: 0.949294
Ran for 181050 frames Cell Events: 6592 mean_circ: 0.949296
Ran for 181550 frames Cell Events: 6601 mean_circ: 0.949314
Ran for 182550 frames Cell Events: 6658 mean_circ: 0.949293
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Ran for 185550 frames Cell Events: 6771 mean_circ: 0.949286
Ran for 186050 frames Cell Events: 6793 mean_circ: 0.949228
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Ran for 187550 frames Cell Events: 6854 mean_circ: 0.949237
Ran for 188050 frames Cell Events: 6866 mean_circ: 0.94925
Ran for 188550 frames Cell Events: 6875 mean_circ: 0.949253
Ran for 189050 frames Cell Events: 6891 mean_circ: 0.949268
Ran for 189550 frames Cell Events: 6908 mean_circ: 0.949281
Ran for 191050 frames Cell Events: 6980 mean_circ: 0.949258
Ran for 191550 frames Cell Events: 6996 mean_circ: 0.949257
Ran for 192550 frames Cell Events: 7044 mean_circ: 0.949248
Ran for 193550 frames Cell Events: 7082 mean_circ: 0.949233
Ran for 194550 frames Cell Events: 7128 mean_circ: 0.949218
Ran for 195050 frames Cell Events: 7146 mean_circ: 0.94922
Ran for 195550 frames Cell Events: 7162 mean_circ: 0.949222
Ran for 196550 frames Cell Events: 7195 mean_circ: 0.949157
Ran for 197050 frames Cell Events: 7217 mean_circ: 0.949115
Ran for 197550 frames Cell Events: 7235 mean_circ: 0.949125
Ran for 198550 frames Cell Events: 7274 mean_circ: 0.949118
Ran for 199050 frames Cell Events: 7284 mean_circ: 0.949123
Ran for 199550 frames Cell Events: 7308 mean_circ: 0.949141
Ran for 200050 frames Cell Events: 7322 mean_circ: 0.94914
Ran for 201050 frames Cell Events: 7355 mean_circ: 0.949102
Ran for 201550 frames Cell Events: 7375 mean_circ: 0.94911
Ran for 202550 frames Cell Events: 7411 mean_circ: 0.94915
Ran for 203550 frames Cell Events: 7445 mean_circ: 0.94919
Ran for 204050 frames Cell Events: 7470 mean_circ: 0.949194
Ran for 205050 frames Cell Events: 7517 mean_circ: 0.949134
Ran for 205550 frames Cell Events: 7532 mean_circ: 0.949136
Ran for 207050 frames Cell Events: 7587 mean_circ: 0.949072
Ran for 207550 frames Cell Events: 7599 mean_circ: 0.949066
Ran for 208050 frames Cell Events: 7611 mean_circ: 0.949068
Ran for 209050 frames Cell Events: 7647 mean_circ: 0.949095
Ran for 209550 frames Cell Events: 7665 mean_circ: 0.949101
Ran for 210550 frames Cell Events: 7696 mean_circ: 0.949105
Ran for 211050 frames Cell Events: 7711 mean_circ: 0.949111
Ran for 211550 frames Cell Events: 7733 mean_circ: 0.949044
Ran for 212050 frames Cell Events: 7747 mean_circ: 0.949052
Ran for 212550 frames Cell Events: 7760 mean_circ: 0.949066
Ran for 213050 frames Cell Events: 7776 mean_circ: 0.949023
Ran for 213550 frames Cell Events: 7788 mean_circ: 0.949023
Ran for 214050 frames Cell Events: 7812 mean_circ: 0.94904
Ran for 214550 frames Cell Events: 7837 mean_circ: 0.949027
Ran for 215050 frames Cell Events: 7849 mean_circ: 0.949027
Ran for 215550 frames Cell Events: 7868 mean_circ: 0.949027
Ran for 216550 frames Cell Events: 7892 mean_circ: 0.949005
Ran for 217550 frames Cell Events: 7930 mean_circ: 0.949049
Ran for 218050 frames Cell Events: 7939 mean_circ: 0.949061
Ran for 219550 frames Cell Events: 7996 mean_circ: 0.949071
Ran for 220050 frames Cell Events: 8016 mean_circ: 0.949041
Ran for 221050 frames Cell Events: 8057 mean_circ: 0.949079
Ran for 222050 frames Cell Events: 8086 mean_circ: 0.949069
Ran for 222550 frames Cell Events: 8105 mean_circ: 0.949064
Ran for 223050 frames Cell Events: 8116 mean_circ: 0.949061
Ran for 223550 frames Cell Events: 8125 mean_circ: 0.94907
Ran for 225050 frames Cell Events: 8156 mean_circ: 0.949088
Ran for 225550 frames Cell Events: 8167 mean_circ: 0.949101
Ran for 226050 frames Cell Events: 8193 mean_circ: 0.949113
Ran for 227050 frames Cell Events: 8223 mean_circ: 0.949108
Ran for 227550 frames Cell Events: 8233 mean_circ: 0.949098
Ran for 228050 frames Cell Events: 8253 mean_circ: 0.949109
Ran for 228550 frames Cell Events: 8272 mean_circ: 0.949101
Ran for 229550 frames Cell Events: 8293 mean_circ: 0.949129
Ran for 230050 frames Cell Events: 8309 mean_circ: 0.949117
Ran for 230550 frames Cell Events: 8323 mean_circ: 0.949108
Ran for 231050 frames Cell Events: 8343 mean_circ: 0.949089
Ran for 231550 frames Cell Events: 8356 mean_circ: 0.949075
Ran for 232050 frames Cell Events: 8377 mean_circ: 0.949064
Ran for 232550 frames Cell Events: 8395 mean_circ: 0.949018
Ran for 233050 frames Cell Events: 8413 mean_circ: 0.94904
Ran for 233550 frames Cell Events: 8427 mean_circ: 0.949016
Ran for 234050 frames Cell Events: 8451 mean_circ: 0.949021
Ran for 235050 frames Cell Events: 8480 mean_circ: 0.949001
Ran for 235550 frames Cell Events: 8490 mean_circ: 0.948995
Ran for 236050 frames Cell Events: 8507 mean_circ: 0.948996
Ran for 237050 frames Cell Events: 8555 mean_circ: 0.94892
Ran for 237550 frames Cell Events: 8568 mean_circ: 0.94894
Ran for 238550 frames Cell Events: 8598 mean_circ: 0.948963
Ran for 239050 frames Cell Events: 8614 mean_circ: 0.948965
Ran for 239550 frames Cell Events: 8627 mean_circ: 0.948968
Ran for 240050 frames Cell Events: 8640 mean_circ: 0.948974
Ran for 240550 frames Cell Events: 8662 mean_circ: 0.948996
Ran for 241050 frames Cell Events: 8680 mean_circ: 0.949006
Ran for 241550 frames Cell Events: 8696 mean_circ: 0.949024
End this measurment..
Stopping time: 1.38081e+008
****************************************
Measurement finished
Mean Circularitiy: 0.948906
Mean Area: 631.314
Mean FL-1 intensity: 3209.83
Mean FL-2 intensity: 3680.04
Mean FL-3 intensity: 0
frames processed: 241819
Total Time: 121067ms
Number of Runs (new bg img) 0
Frames collected: 241933
Skipped frames: 12656
Rescued Frames: 1109366
Samples DAQ: 60484409
Samples written: 120966268
Samples per Channel: 60483134
FPS: 1998.33
Samples per second: 499582
Expected samples/s: 500000
Events: 8721
Events per second: 72.0342
jumped back (PMT): 6093
#Frames read, frequency
# 0 frames :333450
# 1 frames :131483
# 2 frames :5939
# 3 frames :2005
# 4 frames :800
# 5 frames :2057
# 6 frames :2191
# 7 frames :1241
# 8 frames :542
# 9 frames :463
# 10 frames :1133
# 11 frames :570
# 12 frames :464
# 13 frames :271
# 14 frames :226
# 15 frames :167
# 16 frames :159
# 17 frames :127
# 18 frames :98
# 19 frames :61
# 20 frames :57
# 21 frames :50
# 22 frames :33
# 23 frames :32
# 24 frames :23
# 25 frames :26
# 26 frames :20
# 27 frames :16
# 28 frames :8
# 29 frames :17
# 30 frames :11
# 31 frames :6
# 32 frames :3
# 33 frames :8
# 34 frames :8
# 35 frames :6
# 36 frames :2
# 37 frames :6
# 38 frames :3
# 39 frames :1
# 40 frames :2
# 43 frames :3
# 49 frames :1
# 50 frames :1
# 56 frames :1
# 58 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.509
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0