Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_17.58.22
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "09f13a952f469aeab194983d96966405",
"name": "M1_20170615_1902_dsRNA_w5_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "15:58:46"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.5504
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.43472e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.940029
Ran for 550 frames Cell Events: 15 mean_circ: 0.959684
Ran for 1550 frames Cell Events: 64 mean_circ: 0.946644
Ran for 2050 frames Cell Events: 77 mean_circ: 0.943492
Ran for 2550 frames Cell Events: 91 mean_circ: 0.943069
Ran for 3050 frames Cell Events: 101 mean_circ: 0.939221
Ran for 4050 frames Cell Events: 128 mean_circ: 0.940674
Ran for 5050 frames Cell Events: 161 mean_circ: 0.943712
Ran for 6050 frames Cell Events: 198 mean_circ: 0.943328
Ran for 6550 frames Cell Events: 210 mean_circ: 0.943681
Ran for 7050 frames Cell Events: 226 mean_circ: 0.943895
Ran for 8050 frames Cell Events: 255 mean_circ: 0.943279
Ran for 9550 frames Cell Events: 309 mean_circ: 0.943466
Ran for 10050 frames Cell Events: 323 mean_circ: 0.943991
Ran for 10550 frames Cell Events: 345 mean_circ: 0.942918
Ran for 11050 frames Cell Events: 370 mean_circ: 0.941511
Ran for 11550 frames Cell Events: 380 mean_circ: 0.941945
Ran for 12550 frames Cell Events: 412 mean_circ: 0.941653
Ran for 13050 frames Cell Events: 435 mean_circ: 0.941936
Ran for 13550 frames Cell Events: 455 mean_circ: 0.942247
Ran for 14050 frames Cell Events: 464 mean_circ: 0.942612
Ran for 14550 frames Cell Events: 475 mean_circ: 0.94261
Ran for 15050 frames Cell Events: 487 mean_circ: 0.942123
Ran for 15550 frames Cell Events: 501 mean_circ: 0.942512
Ran for 16050 frames Cell Events: 518 mean_circ: 0.942818
Ran for 16550 frames Cell Events: 534 mean_circ: 0.942787
Ran for 17050 frames Cell Events: 548 mean_circ: 0.942754
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Ran for 18050 frames Cell Events: 594 mean_circ: 0.94214
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Ran for 19050 frames Cell Events: 619 mean_circ: 0.941978
Ran for 19550 frames Cell Events: 627 mean_circ: 0.942111
Ran for 20050 frames Cell Events: 640 mean_circ: 0.942217
Ran for 20550 frames Cell Events: 655 mean_circ: 0.942441
Ran for 21050 frames Cell Events: 676 mean_circ: 0.942633
Ran for 21550 frames Cell Events: 688 mean_circ: 0.942638
Ran for 22050 frames Cell Events: 701 mean_circ: 0.942528
Ran for 23050 frames Cell Events: 739 mean_circ: 0.942592
Ran for 23550 frames Cell Events: 756 mean_circ: 0.942388
Ran for 25050 frames Cell Events: 809 mean_circ: 0.942759
Ran for 25550 frames Cell Events: 824 mean_circ: 0.942973
Ran for 26550 frames Cell Events: 842 mean_circ: 0.942681
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Ran for 28050 frames Cell Events: 881 mean_circ: 0.942325
Ran for 28550 frames Cell Events: 897 mean_circ: 0.942519
Ran for 29050 frames Cell Events: 909 mean_circ: 0.942518
Ran for 29550 frames Cell Events: 917 mean_circ: 0.942715
Ran for 30050 frames Cell Events: 933 mean_circ: 0.942374
Ran for 30550 frames Cell Events: 952 mean_circ: 0.942271
Ran for 31050 frames Cell Events: 962 mean_circ: 0.942645
Ran for 32050 frames Cell Events: 988 mean_circ: 0.942737
Ran for 33050 frames Cell Events: 1017 mean_circ: 0.942752
Ran for 33550 frames Cell Events: 1030 mean_circ: 0.942693
Ran for 34050 frames Cell Events: 1035 mean_circ: 0.942826
Ran for 35050 frames Cell Events: 1070 mean_circ: 0.94271
Ran for 35550 frames Cell Events: 1081 mean_circ: 0.942469
Ran for 36050 frames Cell Events: 1091 mean_circ: 0.942494
Ran for 36550 frames Cell Events: 1104 mean_circ: 0.942359
Ran for 37050 frames Cell Events: 1120 mean_circ: 0.942462
Ran for 37550 frames Cell Events: 1134 mean_circ: 0.942308
Ran for 38050 frames Cell Events: 1160 mean_circ: 0.942412
Ran for 38550 frames Cell Events: 1172 mean_circ: 0.942337
Ran for 39550 frames Cell Events: 1212 mean_circ: 0.941939
Ran for 40050 frames Cell Events: 1232 mean_circ: 0.942116
Ran for 40550 frames Cell Events: 1252 mean_circ: 0.942228
Ran for 41050 frames Cell Events: 1272 mean_circ: 0.941683
Ran for 42050 frames Cell Events: 1306 mean_circ: 0.941889
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Ran for 51050 frames Cell Events: 1572 mean_circ: 0.941016
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Ran for 52550 frames Cell Events: 1620 mean_circ: 0.940804
Ran for 53050 frames Cell Events: 1640 mean_circ: 0.940891
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Ran for 56050 frames Cell Events: 1734 mean_circ: 0.940976
Ran for 56550 frames Cell Events: 1750 mean_circ: 0.940867
Ran for 57050 frames Cell Events: 1762 mean_circ: 0.940811
Ran for 57550 frames Cell Events: 1784 mean_circ: 0.94069
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Ran for 59050 frames Cell Events: 1835 mean_circ: 0.940775
Ran for 59550 frames Cell Events: 1850 mean_circ: 0.940844
Ran for 60050 frames Cell Events: 1870 mean_circ: 0.940851
Ran for 61050 frames Cell Events: 1896 mean_circ: 0.940823
Ran for 61550 frames Cell Events: 1913 mean_circ: 0.940862
Ran for 62050 frames Cell Events: 1928 mean_circ: 0.94094
Ran for 63050 frames Cell Events: 1958 mean_circ: 0.940986
Ran for 64050 frames Cell Events: 1992 mean_circ: 0.940906
Ran for 64550 frames Cell Events: 2009 mean_circ: 0.940968
Ran for 65050 frames Cell Events: 2029 mean_circ: 0.940978
Ran for 65550 frames Cell Events: 2042 mean_circ: 0.940883
Ran for 66050 frames Cell Events: 2070 mean_circ: 0.940913
Ran for 66550 frames Cell Events: 2092 mean_circ: 0.940999
Ran for 67050 frames Cell Events: 2105 mean_circ: 0.941016
Ran for 67550 frames Cell Events: 2118 mean_circ: 0.941011
Ran for 68050 frames Cell Events: 2138 mean_circ: 0.940883
Ran for 68550 frames Cell Events: 2152 mean_circ: 0.940941
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Ran for 70050 frames Cell Events: 2193 mean_circ: 0.941065
Ran for 71050 frames Cell Events: 2222 mean_circ: 0.940985
Ran for 71550 frames Cell Events: 2234 mean_circ: 0.941027
Ran for 72050 frames Cell Events: 2245 mean_circ: 0.941049
Ran for 72550 frames Cell Events: 2257 mean_circ: 0.94107
Ran for 74050 frames Cell Events: 2302 mean_circ: 0.941125
Ran for 74550 frames Cell Events: 2311 mean_circ: 0.941147
Ran for 75050 frames Cell Events: 2337 mean_circ: 0.941185
Ran for 75550 frames Cell Events: 2358 mean_circ: 0.941148
Ran for 76050 frames Cell Events: 2377 mean_circ: 0.941261
Ran for 76550 frames Cell Events: 2389 mean_circ: 0.941317
Ran for 77050 frames Cell Events: 2403 mean_circ: 0.941209
Ran for 78050 frames Cell Events: 2433 mean_circ: 0.941209
Ran for 79550 frames Cell Events: 2475 mean_circ: 0.941384
Ran for 80550 frames Cell Events: 2512 mean_circ: 0.941523
Ran for 81050 frames Cell Events: 2518 mean_circ: 0.941541
Ran for 81550 frames Cell Events: 2538 mean_circ: 0.941299
Ran for 82550 frames Cell Events: 2573 mean_circ: 0.94143
Ran for 83050 frames Cell Events: 2585 mean_circ: 0.941419
Ran for 83550 frames Cell Events: 2608 mean_circ: 0.941513
Ran for 84050 frames Cell Events: 2618 mean_circ: 0.941534
Ran for 84550 frames Cell Events: 2629 mean_circ: 0.941524
Ran for 85050 frames Cell Events: 2656 mean_circ: 0.94143
Ran for 86050 frames Cell Events: 2686 mean_circ: 0.941403
Ran for 86550 frames Cell Events: 2703 mean_circ: 0.94151
Ran for 87050 frames Cell Events: 2715 mean_circ: 0.941464
Ran for 88050 frames Cell Events: 2748 mean_circ: 0.941535
Ran for 88550 frames Cell Events: 2763 mean_circ: 0.941561
Ran for 89050 frames Cell Events: 2777 mean_circ: 0.941546
Ran for 91050 frames Cell Events: 2839 mean_circ: 0.941498
Ran for 91550 frames Cell Events: 2862 mean_circ: 0.941537
Ran for 92050 frames Cell Events: 2874 mean_circ: 0.941509
Ran for 92550 frames Cell Events: 2884 mean_circ: 0.941536
Ran for 94050 frames Cell Events: 2933 mean_circ: 0.941572
Ran for 94550 frames Cell Events: 2943 mean_circ: 0.941596
Ran for 95050 frames Cell Events: 2950 mean_circ: 0.94163
Ran for 96050 frames Cell Events: 2974 mean_circ: 0.941652
Ran for 96550 frames Cell Events: 2994 mean_circ: 0.941584
Ran for 97550 frames Cell Events: 3030 mean_circ: 0.941567
Ran for 98050 frames Cell Events: 3055 mean_circ: 0.941574
Ran for 99050 frames Cell Events: 3103 mean_circ: 0.941507
Ran for 99550 frames Cell Events: 3114 mean_circ: 0.941557
Ran for 100050 frames Cell Events: 3125 mean_circ: 0.941548
Ran for 100550 frames Cell Events: 3138 mean_circ: 0.941568
Ran for 101050 frames Cell Events: 3149 mean_circ: 0.941502
Ran for 101550 frames Cell Events: 3175 mean_circ: 0.9415
Ran for 103050 frames Cell Events: 3234 mean_circ: 0.941523
Ran for 103550 frames Cell Events: 3240 mean_circ: 0.941527
Ran for 104550 frames Cell Events: 3268 mean_circ: 0.94165
Ran for 105050 frames Cell Events: 3277 mean_circ: 0.941689
Ran for 105550 frames Cell Events: 3289 mean_circ: 0.9417
Ran for 106050 frames Cell Events: 3306 mean_circ: 0.941633
Ran for 106550 frames Cell Events: 3321 mean_circ: 0.941651
Ran for 107050 frames Cell Events: 3336 mean_circ: 0.941653
Ran for 107550 frames Cell Events: 3347 mean_circ: 0.941715
Ran for 108050 frames Cell Events: 3364 mean_circ: 0.941769
Ran for 108550 frames Cell Events: 3377 mean_circ: 0.941834
Ran for 109550 frames Cell Events: 3425 mean_circ: 0.941856
Ran for 110050 frames Cell Events: 3434 mean_circ: 0.941857
Ran for 110550 frames Cell Events: 3451 mean_circ: 0.941814
Ran for 111550 frames Cell Events: 3476 mean_circ: 0.941935
Ran for 112050 frames Cell Events: 3488 mean_circ: 0.9419
Ran for 112550 frames Cell Events: 3503 mean_circ: 0.941854
Ran for 113050 frames Cell Events: 3519 mean_circ: 0.941829
Ran for 113550 frames Cell Events: 3541 mean_circ: 0.941775
Ran for 114050 frames Cell Events: 3561 mean_circ: 0.941795
Ran for 114550 frames Cell Events: 3572 mean_circ: 0.941721
Ran for 115050 frames Cell Events: 3584 mean_circ: 0.941774
Ran for 115550 frames Cell Events: 3595 mean_circ: 0.941815
Ran for 116050 frames Cell Events: 3609 mean_circ: 0.941788
Ran for 116550 frames Cell Events: 3625 mean_circ: 0.94178
Ran for 117050 frames Cell Events: 3637 mean_circ: 0.94178
Ran for 118050 frames Cell Events: 3668 mean_circ: 0.941758
Ran for 118550 frames Cell Events: 3675 mean_circ: 0.941763
Ran for 119050 frames Cell Events: 3683 mean_circ: 0.941791
Ran for 119550 frames Cell Events: 3691 mean_circ: 0.941764
Ran for 120050 frames Cell Events: 3715 mean_circ: 0.941768
Ran for 120550 frames Cell Events: 3736 mean_circ: 0.941752
Ran for 121050 frames Cell Events: 3749 mean_circ: 0.941768
Ran for 121550 frames Cell Events: 3759 mean_circ: 0.941787
Ran for 122050 frames Cell Events: 3782 mean_circ: 0.941839
Ran for 122550 frames Cell Events: 3793 mean_circ: 0.941772
Ran for 123050 frames Cell Events: 3803 mean_circ: 0.94177
Ran for 123550 frames Cell Events: 3809 mean_circ: 0.941719
Ran for 124550 frames Cell Events: 3831 mean_circ: 0.941774
Ran for 126050 frames Cell Events: 3870 mean_circ: 0.941663
Ran for 126550 frames Cell Events: 3877 mean_circ: 0.941704
Ran for 127050 frames Cell Events: 3890 mean_circ: 0.941669
Ran for 127550 frames Cell Events: 3903 mean_circ: 0.941582
Ran for 128050 frames Cell Events: 3914 mean_circ: 0.941606
Ran for 128550 frames Cell Events: 3932 mean_circ: 0.941646
Ran for 129050 frames Cell Events: 3942 mean_circ: 0.941648
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Ran for 132050 frames Cell Events: 4038 mean_circ: 0.941651
Ran for 132550 frames Cell Events: 4050 mean_circ: 0.941577
Ran for 133050 frames Cell Events: 4063 mean_circ: 0.941525
Ran for 133550 frames Cell Events: 4078 mean_circ: 0.941531
Ran for 134050 frames Cell Events: 4097 mean_circ: 0.941455
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Ran for 146550 frames Cell Events: 4484 mean_circ: 0.940947
Ran for 148050 frames Cell Events: 4532 mean_circ: 0.940959
Ran for 148550 frames Cell Events: 4550 mean_circ: 0.9409
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Ran for 149550 frames Cell Events: 4582 mean_circ: 0.940934
Ran for 150050 frames Cell Events: 4595 mean_circ: 0.940912
Ran for 151550 frames Cell Events: 4625 mean_circ: 0.940857
Ran for 152050 frames Cell Events: 4633 mean_circ: 0.940845
Ran for 152550 frames Cell Events: 4647 mean_circ: 0.940831
Ran for 153550 frames Cell Events: 4667 mean_circ: 0.940875
Ran for 154050 frames Cell Events: 4682 mean_circ: 0.940896
Ran for 155050 frames Cell Events: 4719 mean_circ: 0.940851
Ran for 155550 frames Cell Events: 4739 mean_circ: 0.940895
Ran for 156550 frames Cell Events: 4767 mean_circ: 0.940916
Ran for 157050 frames Cell Events: 4781 mean_circ: 0.940921
Ran for 157550 frames Cell Events: 4795 mean_circ: 0.940909
Ran for 158050 frames Cell Events: 4809 mean_circ: 0.940865
Ran for 158550 frames Cell Events: 4817 mean_circ: 0.940875
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Ran for 160050 frames Cell Events: 4853 mean_circ: 0.94088
Ran for 160550 frames Cell Events: 4867 mean_circ: 0.940921
Ran for 161050 frames Cell Events: 4878 mean_circ: 0.940911
Ran for 161550 frames Cell Events: 4892 mean_circ: 0.940917
Ran for 162050 frames Cell Events: 4909 mean_circ: 0.940892
Ran for 162550 frames Cell Events: 4922 mean_circ: 0.940938
Ran for 163050 frames Cell Events: 4938 mean_circ: 0.940948
Ran for 163550 frames Cell Events: 4952 mean_circ: 0.940954
Ran for 164050 frames Cell Events: 4963 mean_circ: 0.94095
Ran for 164550 frames Cell Events: 4973 mean_circ: 0.94095
Ran for 166050 frames Cell Events: 5011 mean_circ: 0.940931
Ran for 166550 frames Cell Events: 5032 mean_circ: 0.940933
Ran for 167050 frames Cell Events: 5043 mean_circ: 0.940894
Ran for 167550 frames Cell Events: 5053 mean_circ: 0.940883
Ran for 168050 frames Cell Events: 5066 mean_circ: 0.940864
Ran for 168550 frames Cell Events: 5080 mean_circ: 0.940875
Ran for 169050 frames Cell Events: 5097 mean_circ: 0.940765
Ran for 169550 frames Cell Events: 5110 mean_circ: 0.940756
Ran for 170050 frames Cell Events: 5120 mean_circ: 0.940759
Ran for 170550 frames Cell Events: 5131 mean_circ: 0.940732
Ran for 171050 frames Cell Events: 5149 mean_circ: 0.940737
Ran for 171550 frames Cell Events: 5168 mean_circ: 0.940667
Ran for 172050 frames Cell Events: 5184 mean_circ: 0.940693
Ran for 172550 frames Cell Events: 5195 mean_circ: 0.940649
Ran for 173050 frames Cell Events: 5210 mean_circ: 0.940663
Ran for 173550 frames Cell Events: 5220 mean_circ: 0.940652
Ran for 174050 frames Cell Events: 5235 mean_circ: 0.940688
Ran for 175050 frames Cell Events: 5266 mean_circ: 0.940553
Ran for 175550 frames Cell Events: 5283 mean_circ: 0.940503
Ran for 176050 frames Cell Events: 5301 mean_circ: 0.940521
Ran for 177050 frames Cell Events: 5341 mean_circ: 0.940392
Ran for 177550 frames Cell Events: 5350 mean_circ: 0.940405
Ran for 178050 frames Cell Events: 5365 mean_circ: 0.940422
Ran for 178550 frames Cell Events: 5379 mean_circ: 0.940479
Ran for 179050 frames Cell Events: 5394 mean_circ: 0.940466
Ran for 180050 frames Cell Events: 5422 mean_circ: 0.940425
Ran for 180550 frames Cell Events: 5444 mean_circ: 0.940347
Ran for 181050 frames Cell Events: 5453 mean_circ: 0.940355
Ran for 181550 frames Cell Events: 5463 mean_circ: 0.940326
Ran for 182050 frames Cell Events: 5472 mean_circ: 0.940281
Ran for 182550 frames Cell Events: 5482 mean_circ: 0.940309
Ran for 183050 frames Cell Events: 5498 mean_circ: 0.940225
Ran for 183550 frames Cell Events: 5519 mean_circ: 0.940225
Ran for 184550 frames Cell Events: 5550 mean_circ: 0.940227
Ran for 185050 frames Cell Events: 5559 mean_circ: 0.940251
Ran for 186050 frames Cell Events: 5597 mean_circ: 0.940205
Ran for 187050 frames Cell Events: 5627 mean_circ: 0.940175
Ran for 188050 frames Cell Events: 5656 mean_circ: 0.940237
Ran for 189050 frames Cell Events: 5682 mean_circ: 0.940297
Ran for 189550 frames Cell Events: 5693 mean_circ: 0.940245
Ran for 191050 frames Cell Events: 5733 mean_circ: 0.940244
Ran for 191550 frames Cell Events: 5752 mean_circ: 0.940156
Ran for 192050 frames Cell Events: 5769 mean_circ: 0.940141
Ran for 192550 frames Cell Events: 5786 mean_circ: 0.940149
Ran for 193050 frames Cell Events: 5799 mean_circ: 0.94017
Ran for 193550 frames Cell Events: 5813 mean_circ: 0.940198
Ran for 194050 frames Cell Events: 5830 mean_circ: 0.940147
Ran for 194550 frames Cell Events: 5851 mean_circ: 0.940101
Ran for 195050 frames Cell Events: 5866 mean_circ: 0.940114
Ran for 195550 frames Cell Events: 5876 mean_circ: 0.940123
Ran for 196050 frames Cell Events: 5882 mean_circ: 0.940128
Ran for 196550 frames Cell Events: 5898 mean_circ: 0.940147
Ran for 197050 frames Cell Events: 5913 mean_circ: 0.940126
Ran for 198050 frames Cell Events: 5947 mean_circ: 0.940151
Ran for 198550 frames Cell Events: 5968 mean_circ: 0.940093
Ran for 199050 frames Cell Events: 5981 mean_circ: 0.940094
Ran for 199550 frames Cell Events: 6000 mean_circ: 0.940009
Ran for 200550 frames Cell Events: 6031 mean_circ: 0.940084
Ran for 201050 frames Cell Events: 6040 mean_circ: 0.940088
Ran for 201550 frames Cell Events: 6051 mean_circ: 0.940038
Ran for 202550 frames Cell Events: 6084 mean_circ: 0.940047
Ran for 203050 frames Cell Events: 6101 mean_circ: 0.940071
Ran for 203550 frames Cell Events: 6117 mean_circ: 0.940089
Ran for 204050 frames Cell Events: 6130 mean_circ: 0.94013
Ran for 205050 frames Cell Events: 6163 mean_circ: 0.940109
Ran for 205550 frames Cell Events: 6173 mean_circ: 0.940136
Ran for 206050 frames Cell Events: 6196 mean_circ: 0.9401
Ran for 207050 frames Cell Events: 6226 mean_circ: 0.940109
Ran for 207550 frames Cell Events: 6250 mean_circ: 0.940139
Ran for 208050 frames Cell Events: 6261 mean_circ: 0.940176
Ran for 208550 frames Cell Events: 6275 mean_circ: 0.940185
Ran for 209050 frames Cell Events: 6287 mean_circ: 0.940204
Ran for 209550 frames Cell Events: 6303 mean_circ: 0.940171
Ran for 210050 frames Cell Events: 6316 mean_circ: 0.940181
Ran for 210550 frames Cell Events: 6332 mean_circ: 0.940194
Ran for 211050 frames Cell Events: 6339 mean_circ: 0.940211
Ran for 212050 frames Cell Events: 6383 mean_circ: 0.940269
Ran for 212550 frames Cell Events: 6400 mean_circ: 0.94026
Ran for 213550 frames Cell Events: 6434 mean_circ: 0.940286
Ran for 214050 frames Cell Events: 6453 mean_circ: 0.940327
Ran for 214550 frames Cell Events: 6468 mean_circ: 0.940334
Ran for 215050 frames Cell Events: 6483 mean_circ: 0.940334
Ran for 215550 frames Cell Events: 6511 mean_circ: 0.940321
Ran for 216050 frames Cell Events: 6533 mean_circ: 0.940368
Ran for 216550 frames Cell Events: 6558 mean_circ: 0.940408
Ran for 217050 frames Cell Events: 6585 mean_circ: 0.9404
Ran for 217550 frames Cell Events: 6605 mean_circ: 0.940443
Ran for 219050 frames Cell Events: 6669 mean_circ: 0.940514
Ran for 219550 frames Cell Events: 6687 mean_circ: 0.940467
Ran for 220050 frames Cell Events: 6696 mean_circ: 0.940482
Ran for 220550 frames Cell Events: 6711 mean_circ: 0.940501
Ran for 221050 frames Cell Events: 6734 mean_circ: 0.940461
Ran for 221550 frames Cell Events: 6755 mean_circ: 0.940471
Ran for 222050 frames Cell Events: 6766 mean_circ: 0.940478
Ran for 222550 frames Cell Events: 6788 mean_circ: 0.940456
Ran for 223050 frames Cell Events: 6801 mean_circ: 0.940457
Ran for 223550 frames Cell Events: 6820 mean_circ: 0.940416
Ran for 224050 frames Cell Events: 6837 mean_circ: 0.940421
Ran for 225050 frames Cell Events: 6890 mean_circ: 0.94037
Ran for 226050 frames Cell Events: 6937 mean_circ: 0.940302
Ran for 227050 frames Cell Events: 6966 mean_circ: 0.940288
Ran for 227550 frames Cell Events: 6985 mean_circ: 0.940285
Ran for 228050 frames Cell Events: 7000 mean_circ: 0.940255
Ran for 228550 frames Cell Events: 7018 mean_circ: 0.940258
Ran for 229050 frames Cell Events: 7027 mean_circ: 0.94026
Ran for 229550 frames Cell Events: 7037 mean_circ: 0.940246
Ran for 230050 frames Cell Events: 7055 mean_circ: 0.940254
Ran for 231550 frames Cell Events: 7111 mean_circ: 0.940202
Ran for 232050 frames Cell Events: 7116 mean_circ: 0.94022
Ran for 233050 frames Cell Events: 7150 mean_circ: 0.94024
Ran for 233550 frames Cell Events: 7163 mean_circ: 0.940289
Ran for 234050 frames Cell Events: 7179 mean_circ: 0.94027
Ran for 236050 frames Cell Events: 7261 mean_circ: 0.940296
Ran for 236550 frames Cell Events: 7275 mean_circ: 0.940286
Ran for 237050 frames Cell Events: 7295 mean_circ: 0.94031
Ran for 237550 frames Cell Events: 7313 mean_circ: 0.940273
Ran for 238050 frames Cell Events: 7323 mean_circ: 0.940252
Ran for 238550 frames Cell Events: 7342 mean_circ: 0.940261
Ran for 239050 frames Cell Events: 7350 mean_circ: 0.9403
Ran for 239550 frames Cell Events: 7365 mean_circ: 0.940341
Ran for 240050 frames Cell Events: 7382 mean_circ: 0.940347
Ran for 241050 frames Cell Events: 7407 mean_circ: 0.940334
Ran for 241550 frames Cell Events: 7423 mean_circ: 0.940355
Ran for 242050 frames Cell Events: 7430 mean_circ: 0.940357
Ran for 243050 frames Cell Events: 7465 mean_circ: 0.940372
Ran for 243550 frames Cell Events: 7489 mean_circ: 0.940407
Ran for 244050 frames Cell Events: 7498 mean_circ: 0.940422
Ran for 244550 frames Cell Events: 7513 mean_circ: 0.940454
Ran for 245050 frames Cell Events: 7532 mean_circ: 0.940467
Ran for 245550 frames Cell Events: 7547 mean_circ: 0.940446
Ran for 246050 frames Cell Events: 7559 mean_circ: 0.940435
Ran for 246550 frames Cell Events: 7572 mean_circ: 0.940456
Ran for 247550 frames Cell Events: 7609 mean_circ: 0.940489
Ran for 248050 frames Cell Events: 7623 mean_circ: 0.940516
Ran for 248550 frames Cell Events: 7630 mean_circ: 0.940538
Ran for 249050 frames Cell Events: 7651 mean_circ: 0.94054
Ran for 250050 frames Cell Events: 7682 mean_circ: 0.940497
Ran for 250550 frames Cell Events: 7698 mean_circ: 0.940479
Ran for 251050 frames Cell Events: 7716 mean_circ: 0.940477
Ran for 251550 frames Cell Events: 7726 mean_circ: 0.940493
Ran for 252050 frames Cell Events: 7738 mean_circ: 0.940503
Ran for 253050 frames Cell Events: 7774 mean_circ: 0.940551
Ran for 253550 frames Cell Events: 7793 mean_circ: 0.940582
Ran for 254050 frames Cell Events: 7813 mean_circ: 0.940592
Ran for 255050 frames Cell Events: 7840 mean_circ: 0.940558
Ran for 255550 frames Cell Events: 7859 mean_circ: 0.940556
Ran for 256050 frames Cell Events: 7879 mean_circ: 0.940595
Ran for 257050 frames Cell Events: 7916 mean_circ: 0.940529
Ran for 257550 frames Cell Events: 7926 mean_circ: 0.94054
Ran for 258050 frames Cell Events: 7948 mean_circ: 0.940534
Ran for 258550 frames Cell Events: 7958 mean_circ: 0.940563
Ran for 259550 frames Cell Events: 7992 mean_circ: 0.940581
Ran for 260050 frames Cell Events: 8008 mean_circ: 0.940591
Ran for 260550 frames Cell Events: 8023 mean_circ: 0.940586
Ran for 262050 frames Cell Events: 8074 mean_circ: 0.940618
Ran for 262550 frames Cell Events: 8089 mean_circ: 0.940619
Ran for 263050 frames Cell Events: 8105 mean_circ: 0.940629
Ran for 263550 frames Cell Events: 8116 mean_circ: 0.940642
Ran for 264050 frames Cell Events: 8135 mean_circ: 0.940646
Ran for 264550 frames Cell Events: 8146 mean_circ: 0.940654
Ran for 265050 frames Cell Events: 8154 mean_circ: 0.940655
Ran for 265550 frames Cell Events: 8174 mean_circ: 0.940646
Ran for 266050 frames Cell Events: 8191 mean_circ: 0.940674
Ran for 267050 frames Cell Events: 8224 mean_circ: 0.940679
Ran for 268050 frames Cell Events: 8253 mean_circ: 0.940697
Ran for 268550 frames Cell Events: 8268 mean_circ: 0.940655
Ran for 269050 frames Cell Events: 8287 mean_circ: 0.940632
Ran for 270050 frames Cell Events: 8330 mean_circ: 0.940607
Ran for 270550 frames Cell Events: 8354 mean_circ: 0.940667
Ran for 271550 frames Cell Events: 8398 mean_circ: 0.940705
Ran for 272050 frames Cell Events: 8409 mean_circ: 0.940717
Ran for 272550 frames Cell Events: 8431 mean_circ: 0.9407
Ran for 273050 frames Cell Events: 8440 mean_circ: 0.940706
Ran for 273550 frames Cell Events: 8455 mean_circ: 0.940696
Ran for 274050 frames Cell Events: 8462 mean_circ: 0.940695
Ran for 274550 frames Cell Events: 8478 mean_circ: 0.940681
Ran for 275050 frames Cell Events: 8486 mean_circ: 0.940708
Ran for 275550 frames Cell Events: 8500 mean_circ: 0.940721
Ran for 277050 frames Cell Events: 8555 mean_circ: 0.940768
Ran for 277550 frames Cell Events: 8567 mean_circ: 0.940764
Ran for 278050 frames Cell Events: 8582 mean_circ: 0.9408
Ran for 278550 frames Cell Events: 8600 mean_circ: 0.940803
Ran for 279550 frames Cell Events: 8632 mean_circ: 0.940792
Ran for 280050 frames Cell Events: 8648 mean_circ: 0.940785
Ran for 280550 frames Cell Events: 8668 mean_circ: 0.940793
Ran for 281550 frames Cell Events: 8703 mean_circ: 0.940815
Ran for 282050 frames Cell Events: 8715 mean_circ: 0.940808
Ran for 284050 frames Cell Events: 8770 mean_circ: 0.94085
Ran for 284550 frames Cell Events: 8779 mean_circ: 0.940851
Ran for 285050 frames Cell Events: 8797 mean_circ: 0.940844
Ran for 285550 frames Cell Events: 8809 mean_circ: 0.940833
Ran for 286050 frames Cell Events: 8822 mean_circ: 0.940812
Ran for 286550 frames Cell Events: 8834 mean_circ: 0.940784
Ran for 288550 frames Cell Events: 8884 mean_circ: 0.940787
Ran for 289050 frames Cell Events: 8903 mean_circ: 0.94076
Ran for 289550 frames Cell Events: 8911 mean_circ: 0.940783
Ran for 290050 frames Cell Events: 8924 mean_circ: 0.940771
Ran for 291050 frames Cell Events: 8953 mean_circ: 0.940733
Ran for 291550 frames Cell Events: 8968 mean_circ: 0.940744
Ran for 292550 frames Cell Events: 8994 mean_circ: 0.940754
Ran for 293050 frames Cell Events: 9014 mean_circ: 0.940759
Ran for 294550 frames Cell Events: 9079 mean_circ: 0.940747
Ran for 295050 frames Cell Events: 9097 mean_circ: 0.94075
Ran for 295550 frames Cell Events: 9112 mean_circ: 0.940738
Ran for 296550 frames Cell Events: 9147 mean_circ: 0.940769
Ran for 297050 frames Cell Events: 9171 mean_circ: 0.940784
Ran for 297550 frames Cell Events: 9186 mean_circ: 0.940781
Ran for 299050 frames Cell Events: 9235 mean_circ: 0.940771
Ran for 299550 frames Cell Events: 9252 mean_circ: 0.940769
Ran for 300050 frames Cell Events: 9266 mean_circ: 0.940765
End this measurment..
Stopping time: 1.43622e+008
****************************************
Measurement finished
Mean Circularitiy: 0.940767
Mean Area: 651.824
Mean FL-1 intensity: 3521.04
Mean FL-2 intensity: 4141.18
Mean FL-3 intensity: 0
frames processed: 300063
Total Time: 150107ms
Number of Runs (new bg img) 0
Frames collected: 300063
Skipped frames: 21874
Rescued Frames: 2096646
Samples DAQ: 75015690
Samples written: 150031082
Samples per Channel: 75015541
FPS: 1998.99
Samples per second: 499746
Expected samples/s: 500000
Events: 9266
Events per second: 61.7291
jumped back (PMT): 7287
#Frames read, frequency
# 0 frames :400285
# 1 frames :178469
# 2 frames :6321
# 3 frames :2226
# 4 frames :1120
# 5 frames :3027
# 6 frames :2239
# 7 frames :1349
# 8 frames :609
# 9 frames :419
# 10 frames :1000
# 11 frames :1197
# 12 frames :488
# 13 frames :278
# 14 frames :210
# 15 frames :187
# 16 frames :157
# 17 frames :131
# 18 frames :86
# 19 frames :81
# 20 frames :69
# 21 frames :42
# 22 frames :27
# 23 frames :16
# 24 frames :13
# 25 frames :11
# 26 frames :6
# 27 frames :10
# 28 frames :4
# 29 frames :4
# 30 frames :1
# 31 frames :3
# 32 frames :2
# 33 frames :4
# 36 frames :2
# 37 frames :1
# 38 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.5504
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0