Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_18.12.01
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "0680035135cadb636227f78d9d6bc24b",
"name": "M1_20170616_1452_dsRNA_N8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:12:26"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7443
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.14908e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.940933
Ran for 1050 frames Cell Events: 26 mean_circ: 0.949786
Ran for 1550 frames Cell Events: 35 mean_circ: 0.953513
Ran for 3050 frames Cell Events: 96 mean_circ: 0.949343
Ran for 3550 frames Cell Events: 112 mean_circ: 0.946718
Ran for 4550 frames Cell Events: 149 mean_circ: 0.949721
Ran for 5050 frames Cell Events: 161 mean_circ: 0.950227
Ran for 5550 frames Cell Events: 178 mean_circ: 0.950574
Ran for 6550 frames Cell Events: 208 mean_circ: 0.950457
Ran for 8050 frames Cell Events: 275 mean_circ: 0.951421
Ran for 8550 frames Cell Events: 290 mean_circ: 0.95181
Ran for 9050 frames Cell Events: 302 mean_circ: 0.950986
Ran for 9550 frames Cell Events: 319 mean_circ: 0.951124
Ran for 10050 frames Cell Events: 332 mean_circ: 0.951342
Ran for 10550 frames Cell Events: 346 mean_circ: 0.951334
Ran for 11050 frames Cell Events: 359 mean_circ: 0.950777
Ran for 12050 frames Cell Events: 395 mean_circ: 0.950438
Ran for 12550 frames Cell Events: 403 mean_circ: 0.950267
Ran for 13050 frames Cell Events: 414 mean_circ: 0.950312
Ran for 14050 frames Cell Events: 444 mean_circ: 0.949945
Ran for 14550 frames Cell Events: 457 mean_circ: 0.949483
Ran for 15050 frames Cell Events: 472 mean_circ: 0.949247
Ran for 17050 frames Cell Events: 542 mean_circ: 0.949433
Ran for 17550 frames Cell Events: 558 mean_circ: 0.948541
Ran for 18050 frames Cell Events: 575 mean_circ: 0.948671
Ran for 18550 frames Cell Events: 587 mean_circ: 0.948834
Ran for 19050 frames Cell Events: 604 mean_circ: 0.948375
Ran for 19550 frames Cell Events: 613 mean_circ: 0.948355
Ran for 20050 frames Cell Events: 632 mean_circ: 0.948376
Ran for 20550 frames Cell Events: 640 mean_circ: 0.948397
Ran for 21550 frames Cell Events: 681 mean_circ: 0.948559
Ran for 22050 frames Cell Events: 703 mean_circ: 0.948506
Ran for 22550 frames Cell Events: 718 mean_circ: 0.948363
Ran for 24550 frames Cell Events: 790 mean_circ: 0.948061
Ran for 25050 frames Cell Events: 804 mean_circ: 0.948143
Ran for 25550 frames Cell Events: 819 mean_circ: 0.948384
Ran for 26050 frames Cell Events: 839 mean_circ: 0.948423
Ran for 26550 frames Cell Events: 853 mean_circ: 0.948569
Ran for 27050 frames Cell Events: 862 mean_circ: 0.948628
Ran for 27550 frames Cell Events: 888 mean_circ: 0.948712
Ran for 28050 frames Cell Events: 907 mean_circ: 0.948299
Ran for 28550 frames Cell Events: 925 mean_circ: 0.948634
Ran for 29050 frames Cell Events: 940 mean_circ: 0.948527
Ran for 30050 frames Cell Events: 978 mean_circ: 0.948731
Ran for 31550 frames Cell Events: 1024 mean_circ: 0.948887
Ran for 33550 frames Cell Events: 1072 mean_circ: 0.948683
Ran for 34050 frames Cell Events: 1093 mean_circ: 0.948643
Ran for 35550 frames Cell Events: 1138 mean_circ: 0.948903
Ran for 36050 frames Cell Events: 1154 mean_circ: 0.948938
Ran for 36550 frames Cell Events: 1172 mean_circ: 0.949018
Ran for 37050 frames Cell Events: 1188 mean_circ: 0.949192
Ran for 37550 frames Cell Events: 1200 mean_circ: 0.949305
Ran for 38050 frames Cell Events: 1218 mean_circ: 0.949267
Ran for 38550 frames Cell Events: 1232 mean_circ: 0.949267
Ran for 39550 frames Cell Events: 1259 mean_circ: 0.949149
Ran for 40550 frames Cell Events: 1291 mean_circ: 0.949343
Ran for 41050 frames Cell Events: 1303 mean_circ: 0.949153
Ran for 42050 frames Cell Events: 1352 mean_circ: 0.94887
Ran for 42550 frames Cell Events: 1368 mean_circ: 0.948938
Ran for 43050 frames Cell Events: 1386 mean_circ: 0.949068
Ran for 44050 frames Cell Events: 1427 mean_circ: 0.94897
Ran for 45050 frames Cell Events: 1464 mean_circ: 0.949076
Ran for 45550 frames Cell Events: 1481 mean_circ: 0.949129
Ran for 46050 frames Cell Events: 1498 mean_circ: 0.949125
Ran for 46550 frames Cell Events: 1511 mean_circ: 0.949079
Ran for 47050 frames Cell Events: 1524 mean_circ: 0.949057
Ran for 47550 frames Cell Events: 1533 mean_circ: 0.949142
Ran for 48050 frames Cell Events: 1547 mean_circ: 0.949219
Ran for 49550 frames Cell Events: 1611 mean_circ: 0.949344
Ran for 50050 frames Cell Events: 1630 mean_circ: 0.949321
Ran for 52550 frames Cell Events: 1693 mean_circ: 0.949244
Ran for 54050 frames Cell Events: 1744 mean_circ: 0.949144
Ran for 54550 frames Cell Events: 1755 mean_circ: 0.949198
Ran for 55050 frames Cell Events: 1763 mean_circ: 0.949214
Ran for 56050 frames Cell Events: 1791 mean_circ: 0.949186
Ran for 56550 frames Cell Events: 1802 mean_circ: 0.949072
Ran for 57050 frames Cell Events: 1818 mean_circ: 0.949056
Ran for 57550 frames Cell Events: 1838 mean_circ: 0.949166
Ran for 59050 frames Cell Events: 1893 mean_circ: 0.949226
Ran for 60550 frames Cell Events: 1945 mean_circ: 0.949331
Ran for 61550 frames Cell Events: 1980 mean_circ: 0.949255
Ran for 62050 frames Cell Events: 1996 mean_circ: 0.9491
Ran for 62550 frames Cell Events: 2016 mean_circ: 0.949086
Ran for 63050 frames Cell Events: 2032 mean_circ: 0.948951
Ran for 63550 frames Cell Events: 2055 mean_circ: 0.948858
Ran for 64050 frames Cell Events: 2069 mean_circ: 0.948877
Ran for 64550 frames Cell Events: 2090 mean_circ: 0.948861
Ran for 65050 frames Cell Events: 2109 mean_circ: 0.948905
Ran for 66050 frames Cell Events: 2132 mean_circ: 0.948912
Ran for 66550 frames Cell Events: 2146 mean_circ: 0.948928
Ran for 68050 frames Cell Events: 2200 mean_circ: 0.949004
Ran for 69550 frames Cell Events: 2250 mean_circ: 0.949016
Ran for 70050 frames Cell Events: 2268 mean_circ: 0.948993
Ran for 70550 frames Cell Events: 2288 mean_circ: 0.949053
Ran for 71550 frames Cell Events: 2315 mean_circ: 0.948969
Ran for 72050 frames Cell Events: 2328 mean_circ: 0.948972
Ran for 72550 frames Cell Events: 2342 mean_circ: 0.948908
Ran for 73050 frames Cell Events: 2355 mean_circ: 0.94894
Ran for 73550 frames Cell Events: 2375 mean_circ: 0.948979
Ran for 74050 frames Cell Events: 2386 mean_circ: 0.948987
Ran for 75050 frames Cell Events: 2424 mean_circ: 0.948921
Ran for 76050 frames Cell Events: 2462 mean_circ: 0.948906
Ran for 76550 frames Cell Events: 2474 mean_circ: 0.948869
Ran for 77050 frames Cell Events: 2483 mean_circ: 0.948868
Ran for 77550 frames Cell Events: 2493 mean_circ: 0.948892
Ran for 78050 frames Cell Events: 2512 mean_circ: 0.948829
Ran for 78550 frames Cell Events: 2523 mean_circ: 0.948846
Ran for 79050 frames Cell Events: 2539 mean_circ: 0.948778
Ran for 80550 frames Cell Events: 2589 mean_circ: 0.948783
Ran for 81050 frames Cell Events: 2605 mean_circ: 0.94876
Ran for 81550 frames Cell Events: 2625 mean_circ: 0.948823
Ran for 82550 frames Cell Events: 2657 mean_circ: 0.948796
Ran for 83550 frames Cell Events: 2688 mean_circ: 0.948851
Ran for 84050 frames Cell Events: 2698 mean_circ: 0.948911
Ran for 85050 frames Cell Events: 2740 mean_circ: 0.948888
Ran for 85550 frames Cell Events: 2753 mean_circ: 0.948923
Ran for 87050 frames Cell Events: 2814 mean_circ: 0.949017
Ran for 87550 frames Cell Events: 2832 mean_circ: 0.948905
Ran for 88050 frames Cell Events: 2843 mean_circ: 0.948929
Ran for 89550 frames Cell Events: 2898 mean_circ: 0.948979
Ran for 90050 frames Cell Events: 2906 mean_circ: 0.948945
Ran for 90550 frames Cell Events: 2922 mean_circ: 0.949013
Ran for 91550 frames Cell Events: 2958 mean_circ: 0.949054
Ran for 92550 frames Cell Events: 2986 mean_circ: 0.949025
Ran for 93050 frames Cell Events: 2999 mean_circ: 0.949027
Ran for 93550 frames Cell Events: 3015 mean_circ: 0.949102
Ran for 94050 frames Cell Events: 3032 mean_circ: 0.949136
Ran for 96050 frames Cell Events: 3105 mean_circ: 0.949099
Ran for 97050 frames Cell Events: 3132 mean_circ: 0.949143
Ran for 97550 frames Cell Events: 3144 mean_circ: 0.949104
Ran for 98050 frames Cell Events: 3167 mean_circ: 0.94907
Ran for 98550 frames Cell Events: 3185 mean_circ: 0.949007
Ran for 99050 frames Cell Events: 3199 mean_circ: 0.94898
Ran for 100050 frames Cell Events: 3229 mean_circ: 0.94892
Ran for 100550 frames Cell Events: 3242 mean_circ: 0.94896
Ran for 101550 frames Cell Events: 3269 mean_circ: 0.949044
Ran for 102050 frames Cell Events: 3281 mean_circ: 0.949001
Ran for 103050 frames Cell Events: 3316 mean_circ: 0.949002
Ran for 103550 frames Cell Events: 3332 mean_circ: 0.949021
Ran for 104050 frames Cell Events: 3342 mean_circ: 0.949033
Ran for 104550 frames Cell Events: 3368 mean_circ: 0.94899
Ran for 105050 frames Cell Events: 3383 mean_circ: 0.948993
Ran for 105550 frames Cell Events: 3401 mean_circ: 0.949
Ran for 106550 frames Cell Events: 3418 mean_circ: 0.949021
Ran for 107050 frames Cell Events: 3432 mean_circ: 0.949052
Ran for 108550 frames Cell Events: 3493 mean_circ: 0.949028
Ran for 109050 frames Cell Events: 3513 mean_circ: 0.949006
Ran for 109550 frames Cell Events: 3525 mean_circ: 0.94904
Ran for 110050 frames Cell Events: 3539 mean_circ: 0.949019
Ran for 110550 frames Cell Events: 3551 mean_circ: 0.948983
Ran for 111550 frames Cell Events: 3575 mean_circ: 0.94895
Ran for 113050 frames Cell Events: 3623 mean_circ: 0.949011
Ran for 114550 frames Cell Events: 3673 mean_circ: 0.948994
Ran for 115050 frames Cell Events: 3683 mean_circ: 0.949025
Ran for 115550 frames Cell Events: 3695 mean_circ: 0.949045
Ran for 116050 frames Cell Events: 3709 mean_circ: 0.949052
Ran for 117050 frames Cell Events: 3739 mean_circ: 0.9491
Ran for 117550 frames Cell Events: 3752 mean_circ: 0.949116
Ran for 118050 frames Cell Events: 3770 mean_circ: 0.949122
Ran for 118550 frames Cell Events: 3781 mean_circ: 0.949109
Ran for 119050 frames Cell Events: 3800 mean_circ: 0.949096
Ran for 119550 frames Cell Events: 3812 mean_circ: 0.949096
Ran for 120550 frames Cell Events: 3841 mean_circ: 0.949082
Ran for 121050 frames Cell Events: 3856 mean_circ: 0.949134
Ran for 122550 frames Cell Events: 3905 mean_circ: 0.949249
Ran for 125050 frames Cell Events: 3978 mean_circ: 0.949227
Ran for 125550 frames Cell Events: 3991 mean_circ: 0.949211
Ran for 126550 frames Cell Events: 4017 mean_circ: 0.949234
Ran for 128050 frames Cell Events: 4077 mean_circ: 0.949228
Ran for 129550 frames Cell Events: 4132 mean_circ: 0.949324
Ran for 130050 frames Cell Events: 4141 mean_circ: 0.949313
Ran for 130550 frames Cell Events: 4155 mean_circ: 0.9493
Ran for 131050 frames Cell Events: 4173 mean_circ: 0.949327
Ran for 131550 frames Cell Events: 4181 mean_circ: 0.949364
Ran for 132550 frames Cell Events: 4225 mean_circ: 0.949342
Ran for 133050 frames Cell Events: 4237 mean_circ: 0.949355
Ran for 134050 frames Cell Events: 4275 mean_circ: 0.949387
Ran for 135050 frames Cell Events: 4321 mean_circ: 0.94937
Ran for 135550 frames Cell Events: 4334 mean_circ: 0.949355
Ran for 136550 frames Cell Events: 4367 mean_circ: 0.949375
Ran for 137050 frames Cell Events: 4378 mean_circ: 0.949386
Ran for 138050 frames Cell Events: 4415 mean_circ: 0.949411
Ran for 139550 frames Cell Events: 4467 mean_circ: 0.949493
Ran for 140050 frames Cell Events: 4480 mean_circ: 0.949539
Ran for 141050 frames Cell Events: 4523 mean_circ: 0.949565
Ran for 143550 frames Cell Events: 4608 mean_circ: 0.949448
Ran for 144550 frames Cell Events: 4643 mean_circ: 0.949454
Ran for 145050 frames Cell Events: 4658 mean_circ: 0.949488
Ran for 145550 frames Cell Events: 4676 mean_circ: 0.949511
Ran for 146550 frames Cell Events: 4710 mean_circ: 0.949541
Ran for 148050 frames Cell Events: 4766 mean_circ: 0.949567
Ran for 148550 frames Cell Events: 4782 mean_circ: 0.949544
Ran for 149050 frames Cell Events: 4818 mean_circ: 0.94942
Ran for 151050 frames Cell Events: 4928 mean_circ: 0.949328
Ran for 151550 frames Cell Events: 4945 mean_circ: 0.949309
Ran for 152050 frames Cell Events: 4960 mean_circ: 0.949281
Ran for 152550 frames Cell Events: 4982 mean_circ: 0.949254
Ran for 153050 frames Cell Events: 5008 mean_circ: 0.949273
Ran for 153550 frames Cell Events: 5032 mean_circ: 0.949272
Ran for 154550 frames Cell Events: 5061 mean_circ: 0.949224
Ran for 155050 frames Cell Events: 5082 mean_circ: 0.949215
Ran for 156050 frames Cell Events: 5122 mean_circ: 0.949268
Ran for 157050 frames Cell Events: 5152 mean_circ: 0.949273
Ran for 157550 frames Cell Events: 5167 mean_circ: 0.949301
Ran for 158050 frames Cell Events: 5190 mean_circ: 0.949307
Ran for 158550 frames Cell Events: 5204 mean_circ: 0.949304
Ran for 159550 frames Cell Events: 5239 mean_circ: 0.949352
Ran for 161050 frames Cell Events: 5300 mean_circ: 0.949366
Ran for 162050 frames Cell Events: 5343 mean_circ: 0.949349
Ran for 164050 frames Cell Events: 5435 mean_circ: 0.949381
Ran for 164550 frames Cell Events: 5449 mean_circ: 0.949419
Ran for 165050 frames Cell Events: 5460 mean_circ: 0.949448
Ran for 165550 frames Cell Events: 5480 mean_circ: 0.94944
Ran for 166550 frames Cell Events: 5509 mean_circ: 0.949456
Ran for 167050 frames Cell Events: 5529 mean_circ: 0.949443
Ran for 167550 frames Cell Events: 5544 mean_circ: 0.949481
Ran for 169050 frames Cell Events: 5609 mean_circ: 0.949469
Ran for 169550 frames Cell Events: 5632 mean_circ: 0.949425
Ran for 170050 frames Cell Events: 5645 mean_circ: 0.949429
Ran for 172050 frames Cell Events: 5714 mean_circ: 0.949386
Ran for 172550 frames Cell Events: 5732 mean_circ: 0.949385
Ran for 173050 frames Cell Events: 5751 mean_circ: 0.949305
Ran for 173550 frames Cell Events: 5765 mean_circ: 0.949302
Ran for 174050 frames Cell Events: 5784 mean_circ: 0.94929
Ran for 174550 frames Cell Events: 5804 mean_circ: 0.949263
Ran for 175050 frames Cell Events: 5817 mean_circ: 0.949293
Ran for 176550 frames Cell Events: 5872 mean_circ: 0.949266
Ran for 177050 frames Cell Events: 5882 mean_circ: 0.949238
Ran for 177550 frames Cell Events: 5905 mean_circ: 0.949208
Ran for 178050 frames Cell Events: 5923 mean_circ: 0.949184
Ran for 180050 frames Cell Events: 6001 mean_circ: 0.949217
Ran for 180550 frames Cell Events: 6011 mean_circ: 0.949185
Ran for 182550 frames Cell Events: 6083 mean_circ: 0.949236
Ran for 183050 frames Cell Events: 6101 mean_circ: 0.949248
Ran for 183550 frames Cell Events: 6114 mean_circ: 0.949265
Ran for 184550 frames Cell Events: 6152 mean_circ: 0.949289
Ran for 185050 frames Cell Events: 6166 mean_circ: 0.949308
Ran for 186050 frames Cell Events: 6200 mean_circ: 0.94933
Ran for 186550 frames Cell Events: 6217 mean_circ: 0.949341
Ran for 187050 frames Cell Events: 6232 mean_circ: 0.949378
Ran for 187550 frames Cell Events: 6254 mean_circ: 0.949385
Ran for 188550 frames Cell Events: 6296 mean_circ: 0.949409
Ran for 189050 frames Cell Events: 6310 mean_circ: 0.94936
Ran for 190050 frames Cell Events: 6331 mean_circ: 0.949333
Ran for 191050 frames Cell Events: 6359 mean_circ: 0.949331
Ran for 191550 frames Cell Events: 6377 mean_circ: 0.949311
Ran for 192050 frames Cell Events: 6390 mean_circ: 0.949334
Ran for 192550 frames Cell Events: 6409 mean_circ: 0.94938
Ran for 194050 frames Cell Events: 6479 mean_circ: 0.949357
Ran for 196050 frames Cell Events: 6557 mean_circ: 0.949287
Ran for 197550 frames Cell Events: 6608 mean_circ: 0.949279
Ran for 198550 frames Cell Events: 6642 mean_circ: 0.949265
Ran for 199050 frames Cell Events: 6668 mean_circ: 0.949252
Ran for 199550 frames Cell Events: 6683 mean_circ: 0.949241
Ran for 200550 frames Cell Events: 6718 mean_circ: 0.949197
Ran for 201050 frames Cell Events: 6736 mean_circ: 0.949188
Ran for 203550 frames Cell Events: 6814 mean_circ: 0.949223
Ran for 205050 frames Cell Events: 6851 mean_circ: 0.949242
Ran for 206050 frames Cell Events: 6870 mean_circ: 0.949241
Ran for 206550 frames Cell Events: 6886 mean_circ: 0.949262
Ran for 207050 frames Cell Events: 6898 mean_circ: 0.949273
Ran for 208050 frames Cell Events: 6940 mean_circ: 0.949271
Ran for 208550 frames Cell Events: 6951 mean_circ: 0.949264
Ran for 209550 frames Cell Events: 6981 mean_circ: 0.949244
Ran for 210050 frames Cell Events: 7003 mean_circ: 0.949202
Ran for 211050 frames Cell Events: 7041 mean_circ: 0.949206
Ran for 211550 frames Cell Events: 7053 mean_circ: 0.949177
Ran for 213050 frames Cell Events: 7111 mean_circ: 0.949202
Ran for 214050 frames Cell Events: 7138 mean_circ: 0.949186
Ran for 214550 frames Cell Events: 7149 mean_circ: 0.949181
Ran for 215050 frames Cell Events: 7162 mean_circ: 0.949199
Ran for 215550 frames Cell Events: 7184 mean_circ: 0.949178
Ran for 216050 frames Cell Events: 7215 mean_circ: 0.949178
Ran for 217050 frames Cell Events: 7264 mean_circ: 0.949227
Ran for 217550 frames Cell Events: 7280 mean_circ: 0.949214
Ran for 218050 frames Cell Events: 7293 mean_circ: 0.949206
Ran for 219050 frames Cell Events: 7328 mean_circ: 0.949215
Ran for 219550 frames Cell Events: 7342 mean_circ: 0.949201
Ran for 220050 frames Cell Events: 7354 mean_circ: 0.94921
Ran for 221050 frames Cell Events: 7381 mean_circ: 0.949226
Ran for 221550 frames Cell Events: 7401 mean_circ: 0.949218
Ran for 222050 frames Cell Events: 7421 mean_circ: 0.949232
Ran for 222550 frames Cell Events: 7435 mean_circ: 0.949257
Ran for 223050 frames Cell Events: 7447 mean_circ: 0.94927
Ran for 223550 frames Cell Events: 7462 mean_circ: 0.949263
Ran for 224050 frames Cell Events: 7491 mean_circ: 0.949271
Ran for 225050 frames Cell Events: 7524 mean_circ: 0.949238
Ran for 225550 frames Cell Events: 7543 mean_circ: 0.949231
Ran for 226050 frames Cell Events: 7566 mean_circ: 0.949248
Ran for 226550 frames Cell Events: 7578 mean_circ: 0.949214
Ran for 227050 frames Cell Events: 7597 mean_circ: 0.949245
Ran for 227550 frames Cell Events: 7613 mean_circ: 0.949255
Ran for 228050 frames Cell Events: 7638 mean_circ: 0.949264
Ran for 228550 frames Cell Events: 7665 mean_circ: 0.949296
Ran for 229050 frames Cell Events: 7674 mean_circ: 0.949304
Ran for 229550 frames Cell Events: 7693 mean_circ: 0.949313
Ran for 230050 frames Cell Events: 7708 mean_circ: 0.949331
Ran for 230550 frames Cell Events: 7720 mean_circ: 0.949322
Ran for 231550 frames Cell Events: 7757 mean_circ: 0.949326
Ran for 233050 frames Cell Events: 7790 mean_circ: 0.949321
Ran for 234550 frames Cell Events: 7827 mean_circ: 0.949378
Ran for 235050 frames Cell Events: 7842 mean_circ: 0.949404
Ran for 236050 frames Cell Events: 7895 mean_circ: 0.949424
Ran for 237550 frames Cell Events: 7956 mean_circ: 0.94933
Ran for 239050 frames Cell Events: 8001 mean_circ: 0.949319
Ran for 239550 frames Cell Events: 8018 mean_circ: 0.949301
Ran for 240050 frames Cell Events: 8030 mean_circ: 0.949298
Ran for 240550 frames Cell Events: 8044 mean_circ: 0.949309
Ran for 241050 frames Cell Events: 8062 mean_circ: 0.949317
Ran for 241550 frames Cell Events: 8078 mean_circ: 0.949353
Ran for 242550 frames Cell Events: 8113 mean_circ: 0.949302
Ran for 243550 frames Cell Events: 8142 mean_circ: 0.949316
Ran for 244050 frames Cell Events: 8159 mean_circ: 0.949318
Ran for 244550 frames Cell Events: 8174 mean_circ: 0.949306
Ran for 245050 frames Cell Events: 8186 mean_circ: 0.949313
Ran for 246050 frames Cell Events: 8216 mean_circ: 0.949321
Ran for 248050 frames Cell Events: 8280 mean_circ: 0.949333
Ran for 248550 frames Cell Events: 8290 mean_circ: 0.949358
Ran for 249050 frames Cell Events: 8312 mean_circ: 0.94936
Ran for 250050 frames Cell Events: 8362 mean_circ: 0.949358
Ran for 251550 frames Cell Events: 8405 mean_circ: 0.949365
Ran for 253050 frames Cell Events: 8465 mean_circ: 0.949362
Ran for 253550 frames Cell Events: 8492 mean_circ: 0.949352
Ran for 254550 frames Cell Events: 8535 mean_circ: 0.949366
Ran for 255050 frames Cell Events: 8556 mean_circ: 0.949288
Ran for 255550 frames Cell Events: 8581 mean_circ: 0.949292
Ran for 256050 frames Cell Events: 8597 mean_circ: 0.949283
Ran for 256550 frames Cell Events: 8616 mean_circ: 0.949253
Ran for 258050 frames Cell Events: 8687 mean_circ: 0.949235
Ran for 259050 frames Cell Events: 8723 mean_circ: 0.949264
Ran for 259550 frames Cell Events: 8736 mean_circ: 0.94927
Ran for 260050 frames Cell Events: 8746 mean_circ: 0.949285
Ran for 261050 frames Cell Events: 8776 mean_circ: 0.949289
Ran for 261550 frames Cell Events: 8798 mean_circ: 0.949301
Ran for 262050 frames Cell Events: 8817 mean_circ: 0.949277
Ran for 262550 frames Cell Events: 8842 mean_circ: 0.949294
Ran for 263050 frames Cell Events: 8862 mean_circ: 0.94926
Ran for 263550 frames Cell Events: 8872 mean_circ: 0.949269
Ran for 264050 frames Cell Events: 8887 mean_circ: 0.949252
Ran for 265050 frames Cell Events: 8933 mean_circ: 0.949265
Ran for 265550 frames Cell Events: 8953 mean_circ: 0.94923
Ran for 267050 frames Cell Events: 9023 mean_circ: 0.949205
Ran for 267550 frames Cell Events: 9037 mean_circ: 0.949214
Ran for 268550 frames Cell Events: 9071 mean_circ: 0.949202
Ran for 269050 frames Cell Events: 9083 mean_circ: 0.949227
Ran for 270050 frames Cell Events: 9108 mean_circ: 0.949231
Ran for 271050 frames Cell Events: 9157 mean_circ: 0.949197
Ran for 271550 frames Cell Events: 9173 mean_circ: 0.949203
Ran for 272050 frames Cell Events: 9183 mean_circ: 0.949183
Ran for 273550 frames Cell Events: 9232 mean_circ: 0.949223
Ran for 274050 frames Cell Events: 9252 mean_circ: 0.949191
Ran for 274550 frames Cell Events: 9267 mean_circ: 0.949192
Ran for 275550 frames Cell Events: 9295 mean_circ: 0.949184
Ran for 276050 frames Cell Events: 9315 mean_circ: 0.949166
Ran for 277050 frames Cell Events: 9342 mean_circ: 0.949184
Ran for 278050 frames Cell Events: 9360 mean_circ: 0.94919
Ran for 278550 frames Cell Events: 9375 mean_circ: 0.949195
Ran for 279550 frames Cell Events: 9407 mean_circ: 0.949174
Ran for 280050 frames Cell Events: 9422 mean_circ: 0.949162
Ran for 282050 frames Cell Events: 9481 mean_circ: 0.949136
Ran for 282550 frames Cell Events: 9502 mean_circ: 0.949138
Ran for 283050 frames Cell Events: 9522 mean_circ: 0.949143
Ran for 284550 frames Cell Events: 9562 mean_circ: 0.949101
Ran for 286550 frames Cell Events: 9629 mean_circ: 0.94909
Ran for 287050 frames Cell Events: 9644 mean_circ: 0.949102
Ran for 287550 frames Cell Events: 9656 mean_circ: 0.949085
Ran for 290550 frames Cell Events: 9759 mean_circ: 0.949053
Ran for 291050 frames Cell Events: 9771 mean_circ: 0.949027
Ran for 291550 frames Cell Events: 9786 mean_circ: 0.949047
End this measurment..
Stopping time: 2.15054e+008
****************************************
Measurement finished
Mean Circularitiy: 0.949045
Mean Area: 606.747
Mean FL-1 intensity: 2695.12
Mean FL-2 intensity: 3324.81
Mean FL-3 intensity: 0
frames processed: 291341
Total Time: 146091ms
Number of Runs (new bg img) 0
Frames collected: 292026
Skipped frames: 11128
Rescued Frames: 1725307
Samples DAQ: 73006427
Samples written: 146012546
Samples per Channel: 73006273
FPS: 1998.93
Samples per second: 499731
Expected samples/s: 500000
Events: 9792
Events per second: 67.0267
jumped back (PMT): 5772
#Frames read, frequency
# 0 frames :423329
# 1 frames :139099
# 2 frames :5802
# 3 frames :2295
# 4 frames :1315
# 5 frames :864
# 6 frames :1337
# 7 frames :1930
# 8 frames :1489
# 9 frames :963
# 10 frames :742
# 11 frames :1170
# 12 frames :805
# 13 frames :564
# 14 frames :409
# 15 frames :311
# 16 frames :230
# 17 frames :204
# 18 frames :173
# 19 frames :155
# 20 frames :143
# 21 frames :114
# 22 frames :93
# 23 frames :73
# 24 frames :67
# 25 frames :38
# 26 frames :44
# 27 frames :30
# 28 frames :27
# 29 frames :29
# 30 frames :20
# 31 frames :21
# 32 frames :21
# 33 frames :11
# 34 frames :15
# 35 frames :9
# 36 frames :11
# 37 frames :7
# 38 frames :6
# 39 frames :10
# 40 frames :7
# 41 frames :5
# 42 frames :6
# 43 frames :1
# 44 frames :6
# 45 frames :2
# 46 frames :2
# 47 frames :2
# 48 frames :4
# 49 frames :2
# 50 frames :2
# 52 frames :1
# 53 frames :1
# 54 frames :1
# 55 frames :2
# 56 frames :3
# 59 frames :1
# 60 frames :1
# 62 frames :1
# 67 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7443
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0