Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_18.21.49
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "e07693fd7b2884b6b84504784258a2c8",
"name": "M1_20170616_1714_dsRNA_O4_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:22:07"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 7176 (max 7177) in '7176'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.1032
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.23392e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 11 mean_circ: 0.944842
Ran for 1050 frames Cell Events: 21 mean_circ: 0.945169
Ran for 1550 frames Cell Events: 34 mean_circ: 0.934824
Ran for 2050 frames Cell Events: 45 mean_circ: 0.935441
Ran for 2550 frames Cell Events: 51 mean_circ: 0.937131
Ran for 3050 frames Cell Events: 56 mean_circ: 0.936726
Ran for 3550 frames Cell Events: 69 mean_circ: 0.939057
Ran for 4550 frames Cell Events: 103 mean_circ: 0.93873
Ran for 6050 frames Cell Events: 135 mean_circ: 0.938692
Ran for 6550 frames Cell Events: 139 mean_circ: 0.937621
Ran for 7050 frames Cell Events: 150 mean_circ: 0.934828
Ran for 7550 frames Cell Events: 158 mean_circ: 0.935133
Ran for 9050 frames Cell Events: 192 mean_circ: 0.936464
Ran for 9550 frames Cell Events: 202 mean_circ: 0.936268
Ran for 10050 frames Cell Events: 213 mean_circ: 0.936018
Ran for 11050 frames Cell Events: 232 mean_circ: 0.936726
Ran for 11550 frames Cell Events: 250 mean_circ: 0.936206
Ran for 12050 frames Cell Events: 270 mean_circ: 0.936274
Ran for 12550 frames Cell Events: 279 mean_circ: 0.936312
Ran for 13050 frames Cell Events: 295 mean_circ: 0.934949
Ran for 13550 frames Cell Events: 318 mean_circ: 0.932363
Ran for 14050 frames Cell Events: 330 mean_circ: 0.931943
Ran for 15550 frames Cell Events: 369 mean_circ: 0.932317
Ran for 16050 frames Cell Events: 375 mean_circ: 0.932416
Ran for 16550 frames Cell Events: 382 mean_circ: 0.931921
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Ran for 20550 frames Cell Events: 461 mean_circ: 0.932281
Ran for 21050 frames Cell Events: 472 mean_circ: 0.932827
Ran for 21550 frames Cell Events: 483 mean_circ: 0.932755
Ran for 22050 frames Cell Events: 492 mean_circ: 0.932465
Ran for 23550 frames Cell Events: 533 mean_circ: 0.932985
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Ran for 24550 frames Cell Events: 551 mean_circ: 0.93338
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Ran for 26050 frames Cell Events: 572 mean_circ: 0.933626
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Ran for 27550 frames Cell Events: 601 mean_circ: 0.933774
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Ran for 30050 frames Cell Events: 672 mean_circ: 0.933958
Ran for 30550 frames Cell Events: 685 mean_circ: 0.93373
Ran for 31050 frames Cell Events: 701 mean_circ: 0.933377
Ran for 31550 frames Cell Events: 716 mean_circ: 0.933193
Ran for 32550 frames Cell Events: 738 mean_circ: 0.933374
Ran for 33050 frames Cell Events: 747 mean_circ: 0.933662
Ran for 33550 frames Cell Events: 767 mean_circ: 0.933323
Ran for 34050 frames Cell Events: 778 mean_circ: 0.93357
Ran for 34550 frames Cell Events: 788 mean_circ: 0.933461
Ran for 35050 frames Cell Events: 804 mean_circ: 0.933561
Ran for 35550 frames Cell Events: 816 mean_circ: 0.933609
Ran for 36050 frames Cell Events: 823 mean_circ: 0.933646
Ran for 36550 frames Cell Events: 834 mean_circ: 0.933543
Ran for 37050 frames Cell Events: 845 mean_circ: 0.933431
Ran for 37550 frames Cell Events: 858 mean_circ: 0.933395
Ran for 38050 frames Cell Events: 875 mean_circ: 0.93327
Ran for 39050 frames Cell Events: 891 mean_circ: 0.933455
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Ran for 40550 frames Cell Events: 923 mean_circ: 0.933469
Ran for 42050 frames Cell Events: 977 mean_circ: 0.933348
Ran for 43050 frames Cell Events: 1015 mean_circ: 0.933272
Ran for 43550 frames Cell Events: 1028 mean_circ: 0.933422
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Ran for 45050 frames Cell Events: 1060 mean_circ: 0.933574
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Ran for 46550 frames Cell Events: 1092 mean_circ: 0.933951
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Ran for 50050 frames Cell Events: 1171 mean_circ: 0.934228
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Ran for 51550 frames Cell Events: 1224 mean_circ: 0.934229
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Ran for 53050 frames Cell Events: 1258 mean_circ: 0.934292
Ran for 53550 frames Cell Events: 1264 mean_circ: 0.934146
Ran for 54050 frames Cell Events: 1272 mean_circ: 0.934209
Ran for 54550 frames Cell Events: 1278 mean_circ: 0.934062
Ran for 55050 frames Cell Events: 1293 mean_circ: 0.93401
Ran for 55550 frames Cell Events: 1307 mean_circ: 0.934134
Ran for 57050 frames Cell Events: 1364 mean_circ: 0.933996
Ran for 58050 frames Cell Events: 1390 mean_circ: 0.934195
Ran for 58550 frames Cell Events: 1403 mean_circ: 0.934209
Ran for 59050 frames Cell Events: 1414 mean_circ: 0.934198
Ran for 59550 frames Cell Events: 1429 mean_circ: 0.934218
Ran for 60050 frames Cell Events: 1441 mean_circ: 0.934372
Ran for 60550 frames Cell Events: 1449 mean_circ: 0.934205
Ran for 61550 frames Cell Events: 1473 mean_circ: 0.933958
Ran for 62050 frames Cell Events: 1485 mean_circ: 0.933997
Ran for 62550 frames Cell Events: 1494 mean_circ: 0.933763
Ran for 63050 frames Cell Events: 1502 mean_circ: 0.933729
Ran for 64550 frames Cell Events: 1549 mean_circ: 0.933849
Ran for 65050 frames Cell Events: 1561 mean_circ: 0.934003
Ran for 65550 frames Cell Events: 1573 mean_circ: 0.934047
Ran for 67050 frames Cell Events: 1615 mean_circ: 0.934201
Ran for 68050 frames Cell Events: 1633 mean_circ: 0.933949
Ran for 68550 frames Cell Events: 1652 mean_circ: 0.934047
Ran for 69050 frames Cell Events: 1666 mean_circ: 0.934124
Ran for 69550 frames Cell Events: 1676 mean_circ: 0.934268
Ran for 71550 frames Cell Events: 1740 mean_circ: 0.934134
Ran for 72050 frames Cell Events: 1752 mean_circ: 0.934169
Ran for 72550 frames Cell Events: 1772 mean_circ: 0.934064
Ran for 73550 frames Cell Events: 1807 mean_circ: 0.933993
Ran for 74050 frames Cell Events: 1827 mean_circ: 0.933783
Ran for 74550 frames Cell Events: 1840 mean_circ: 0.933903
Ran for 75550 frames Cell Events: 1872 mean_circ: 0.93377
Ran for 76550 frames Cell Events: 1892 mean_circ: 0.933683
Ran for 77550 frames Cell Events: 1920 mean_circ: 0.933815
Ran for 78050 frames Cell Events: 1931 mean_circ: 0.933862
Ran for 78550 frames Cell Events: 1939 mean_circ: 0.933829
Ran for 79050 frames Cell Events: 1948 mean_circ: 0.933886
Ran for 79550 frames Cell Events: 1956 mean_circ: 0.933856
Ran for 80050 frames Cell Events: 1973 mean_circ: 0.933918
Ran for 80550 frames Cell Events: 1985 mean_circ: 0.934086
Ran for 81050 frames Cell Events: 2002 mean_circ: 0.934175
Ran for 82050 frames Cell Events: 2020 mean_circ: 0.934176
Ran for 83050 frames Cell Events: 2039 mean_circ: 0.934156
Ran for 83550 frames Cell Events: 2050 mean_circ: 0.934121
Ran for 84550 frames Cell Events: 2072 mean_circ: 0.934212
Ran for 85050 frames Cell Events: 2085 mean_circ: 0.934109
Ran for 86050 frames Cell Events: 2107 mean_circ: 0.934151
Ran for 86550 frames Cell Events: 2118 mean_circ: 0.934206
Ran for 87050 frames Cell Events: 2131 mean_circ: 0.934172
Ran for 87550 frames Cell Events: 2145 mean_circ: 0.934141
Ran for 88550 frames Cell Events: 2171 mean_circ: 0.93424
Ran for 89050 frames Cell Events: 2182 mean_circ: 0.934222
Ran for 89550 frames Cell Events: 2190 mean_circ: 0.934252
Ran for 90550 frames Cell Events: 2230 mean_circ: 0.934207
Ran for 91550 frames Cell Events: 2247 mean_circ: 0.934124
Ran for 92550 frames Cell Events: 2265 mean_circ: 0.934151
Ran for 93050 frames Cell Events: 2274 mean_circ: 0.934163
Ran for 93550 frames Cell Events: 2289 mean_circ: 0.934195
Ran for 94050 frames Cell Events: 2297 mean_circ: 0.934135
Ran for 94550 frames Cell Events: 2307 mean_circ: 0.934112
Ran for 95050 frames Cell Events: 2321 mean_circ: 0.934216
Ran for 95550 frames Cell Events: 2334 mean_circ: 0.934135
Ran for 96050 frames Cell Events: 2354 mean_circ: 0.934143
Ran for 97050 frames Cell Events: 2411 mean_circ: 0.934265
Ran for 97550 frames Cell Events: 2429 mean_circ: 0.934383
Ran for 98550 frames Cell Events: 2455 mean_circ: 0.934377
Ran for 99050 frames Cell Events: 2472 mean_circ: 0.93443
Ran for 99550 frames Cell Events: 2479 mean_circ: 0.934524
Ran for 100050 frames Cell Events: 2491 mean_circ: 0.934613
Ran for 100550 frames Cell Events: 2503 mean_circ: 0.934509
Ran for 101050 frames Cell Events: 2520 mean_circ: 0.934535
Ran for 101550 frames Cell Events: 2535 mean_circ: 0.934546
Ran for 102050 frames Cell Events: 2544 mean_circ: 0.934577
Ran for 102550 frames Cell Events: 2557 mean_circ: 0.934582
Ran for 103050 frames Cell Events: 2570 mean_circ: 0.934653
Ran for 103550 frames Cell Events: 2581 mean_circ: 0.93465
Ran for 104050 frames Cell Events: 2593 mean_circ: 0.934706
Ran for 105550 frames Cell Events: 2630 mean_circ: 0.934692
Ran for 106550 frames Cell Events: 2653 mean_circ: 0.934718
Ran for 107050 frames Cell Events: 2666 mean_circ: 0.934717
Ran for 107550 frames Cell Events: 2674 mean_circ: 0.934766
Ran for 108050 frames Cell Events: 2691 mean_circ: 0.934792
Ran for 108550 frames Cell Events: 2703 mean_circ: 0.934724
Ran for 109050 frames Cell Events: 2725 mean_circ: 0.934682
Ran for 109550 frames Cell Events: 2732 mean_circ: 0.934623
Ran for 110550 frames Cell Events: 2756 mean_circ: 0.934554
Ran for 112550 frames Cell Events: 2798 mean_circ: 0.934516
Ran for 113050 frames Cell Events: 2810 mean_circ: 0.934576
Ran for 113550 frames Cell Events: 2822 mean_circ: 0.934513
Ran for 114050 frames Cell Events: 2838 mean_circ: 0.934605
Ran for 114550 frames Cell Events: 2845 mean_circ: 0.934572
Ran for 115050 frames Cell Events: 2852 mean_circ: 0.9346
Ran for 115550 frames Cell Events: 2858 mean_circ: 0.93446
Ran for 116050 frames Cell Events: 2867 mean_circ: 0.934445
Ran for 116550 frames Cell Events: 2884 mean_circ: 0.934465
Ran for 117550 frames Cell Events: 2911 mean_circ: 0.934593
Ran for 118050 frames Cell Events: 2928 mean_circ: 0.934591
Ran for 119550 frames Cell Events: 2993 mean_circ: 0.934427
Ran for 120050 frames Cell Events: 3011 mean_circ: 0.934366
Ran for 120550 frames Cell Events: 3024 mean_circ: 0.934315
Ran for 121550 frames Cell Events: 3052 mean_circ: 0.934282
Ran for 122050 frames Cell Events: 3064 mean_circ: 0.93428
Ran for 122550 frames Cell Events: 3075 mean_circ: 0.934233
Ran for 123050 frames Cell Events: 3085 mean_circ: 0.934245
Ran for 123550 frames Cell Events: 3097 mean_circ: 0.934219
Ran for 124050 frames Cell Events: 3102 mean_circ: 0.934247
Ran for 124550 frames Cell Events: 3118 mean_circ: 0.934278
Ran for 125550 frames Cell Events: 3149 mean_circ: 0.934382
Ran for 126050 frames Cell Events: 3171 mean_circ: 0.934444
Ran for 126550 frames Cell Events: 3183 mean_circ: 0.9344
Ran for 127050 frames Cell Events: 3193 mean_circ: 0.934417
Ran for 128050 frames Cell Events: 3224 mean_circ: 0.934479
Ran for 128550 frames Cell Events: 3242 mean_circ: 0.934525
Ran for 129050 frames Cell Events: 3257 mean_circ: 0.934528
Ran for 129550 frames Cell Events: 3265 mean_circ: 0.934521
Ran for 130050 frames Cell Events: 3275 mean_circ: 0.934483
Ran for 130550 frames Cell Events: 3293 mean_circ: 0.934398
Ran for 131050 frames Cell Events: 3303 mean_circ: 0.93437
Ran for 131550 frames Cell Events: 3319 mean_circ: 0.934379
Ran for 133050 frames Cell Events: 3351 mean_circ: 0.934387
Ran for 133550 frames Cell Events: 3361 mean_circ: 0.934444
Ran for 134050 frames Cell Events: 3372 mean_circ: 0.934473
Ran for 134550 frames Cell Events: 3386 mean_circ: 0.934487
Ran for 136050 frames Cell Events: 3426 mean_circ: 0.934475
Ran for 136550 frames Cell Events: 3441 mean_circ: 0.934417
Ran for 138050 frames Cell Events: 3478 mean_circ: 0.934412
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Ran for 141050 frames Cell Events: 3525 mean_circ: 0.934581
Ran for 141550 frames Cell Events: 3535 mean_circ: 0.934594
Ran for 142050 frames Cell Events: 3544 mean_circ: 0.934618
Ran for 142550 frames Cell Events: 3562 mean_circ: 0.934601
Ran for 143050 frames Cell Events: 3573 mean_circ: 0.934557
Ran for 143550 frames Cell Events: 3582 mean_circ: 0.934549
Ran for 144550 frames Cell Events: 3602 mean_circ: 0.934586
Ran for 146050 frames Cell Events: 3635 mean_circ: 0.934567
Ran for 146550 frames Cell Events: 3647 mean_circ: 0.934505
Ran for 147050 frames Cell Events: 3663 mean_circ: 0.934536
Ran for 147550 frames Cell Events: 3673 mean_circ: 0.934567
Ran for 148050 frames Cell Events: 3681 mean_circ: 0.934567
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Ran for 149050 frames Cell Events: 3700 mean_circ: 0.934576
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Ran for 156050 frames Cell Events: 3876 mean_circ: 0.934495
Ran for 156550 frames Cell Events: 3884 mean_circ: 0.934471
Ran for 157050 frames Cell Events: 3896 mean_circ: 0.934505
Ran for 157550 frames Cell Events: 3911 mean_circ: 0.934511
Ran for 158050 frames Cell Events: 3926 mean_circ: 0.934502
Ran for 158550 frames Cell Events: 3934 mean_circ: 0.934509
Ran for 159050 frames Cell Events: 3941 mean_circ: 0.934496
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Ran for 160050 frames Cell Events: 3976 mean_circ: 0.934515
Ran for 160550 frames Cell Events: 3991 mean_circ: 0.934548
Ran for 161550 frames Cell Events: 4024 mean_circ: 0.934554
Ran for 162550 frames Cell Events: 4073 mean_circ: 0.934285
Ran for 163050 frames Cell Events: 4103 mean_circ: 0.934285
Ran for 163550 frames Cell Events: 4114 mean_circ: 0.934169
Ran for 164550 frames Cell Events: 4142 mean_circ: 0.934189
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Ran for 167050 frames Cell Events: 4195 mean_circ: 0.934202
Ran for 167550 frames Cell Events: 4210 mean_circ: 0.934178
Ran for 168050 frames Cell Events: 4222 mean_circ: 0.934136
Ran for 168550 frames Cell Events: 4236 mean_circ: 0.934057
Ran for 169050 frames Cell Events: 4248 mean_circ: 0.934032
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Ran for 170550 frames Cell Events: 4283 mean_circ: 0.933962
Ran for 171550 frames Cell Events: 4309 mean_circ: 0.933973
Ran for 172050 frames Cell Events: 4313 mean_circ: 0.933997
Ran for 172550 frames Cell Events: 4321 mean_circ: 0.934039
Ran for 173050 frames Cell Events: 4329 mean_circ: 0.934077
Ran for 173550 frames Cell Events: 4338 mean_circ: 0.934086
Ran for 174050 frames Cell Events: 4349 mean_circ: 0.934114
Ran for 174550 frames Cell Events: 4360 mean_circ: 0.934137
Ran for 175550 frames Cell Events: 4394 mean_circ: 0.934193
Ran for 176050 frames Cell Events: 4406 mean_circ: 0.934182
Ran for 176550 frames Cell Events: 4420 mean_circ: 0.934148
Ran for 177050 frames Cell Events: 4437 mean_circ: 0.93416
Ran for 177550 frames Cell Events: 4447 mean_circ: 0.934217
Ran for 178550 frames Cell Events: 4471 mean_circ: 0.934245
Ran for 179550 frames Cell Events: 4503 mean_circ: 0.934187
Ran for 181050 frames Cell Events: 4535 mean_circ: 0.93425
Ran for 181550 frames Cell Events: 4548 mean_circ: 0.934225
Ran for 182050 frames Cell Events: 4559 mean_circ: 0.934225
Ran for 182550 frames Cell Events: 4573 mean_circ: 0.934272
Ran for 183050 frames Cell Events: 4577 mean_circ: 0.934263
Ran for 184050 frames Cell Events: 4602 mean_circ: 0.934267
Ran for 184550 frames Cell Events: 4620 mean_circ: 0.934261
Ran for 185050 frames Cell Events: 4633 mean_circ: 0.934233
Ran for 185550 frames Cell Events: 4647 mean_circ: 0.934223
Ran for 186050 frames Cell Events: 4663 mean_circ: 0.93422
Ran for 187050 frames Cell Events: 4685 mean_circ: 0.93422
Ran for 187550 frames Cell Events: 4697 mean_circ: 0.934289
Ran for 188050 frames Cell Events: 4716 mean_circ: 0.934327
Ran for 188550 frames Cell Events: 4731 mean_circ: 0.93434
Ran for 189050 frames Cell Events: 4743 mean_circ: 0.934245
Ran for 189550 frames Cell Events: 4762 mean_circ: 0.934237
Ran for 190050 frames Cell Events: 4776 mean_circ: 0.934296
Ran for 190550 frames Cell Events: 4787 mean_circ: 0.934281
Ran for 191550 frames Cell Events: 4812 mean_circ: 0.934191
Ran for 192050 frames Cell Events: 4825 mean_circ: 0.934155
Ran for 193050 frames Cell Events: 4855 mean_circ: 0.934153
Ran for 194050 frames Cell Events: 4875 mean_circ: 0.934165
Ran for 194550 frames Cell Events: 4884 mean_circ: 0.93415
Ran for 195050 frames Cell Events: 4896 mean_circ: 0.934212
Ran for 195550 frames Cell Events: 4909 mean_circ: 0.934252
Ran for 196050 frames Cell Events: 4920 mean_circ: 0.934265
Ran for 196550 frames Cell Events: 4932 mean_circ: 0.934263
Ran for 197050 frames Cell Events: 4942 mean_circ: 0.934259
Ran for 197550 frames Cell Events: 4957 mean_circ: 0.934278
Ran for 198050 frames Cell Events: 4969 mean_circ: 0.934285
Ran for 199050 frames Cell Events: 4992 mean_circ: 0.934241
Ran for 199550 frames Cell Events: 4998 mean_circ: 0.934263
Ran for 201550 frames Cell Events: 5048 mean_circ: 0.934264
Ran for 202050 frames Cell Events: 5059 mean_circ: 0.93425
Ran for 202550 frames Cell Events: 5073 mean_circ: 0.934183
Ran for 203050 frames Cell Events: 5088 mean_circ: 0.934129
Ran for 204050 frames Cell Events: 5103 mean_circ: 0.934178
Ran for 204550 frames Cell Events: 5121 mean_circ: 0.934137
Ran for 205050 frames Cell Events: 5129 mean_circ: 0.934129
Ran for 206050 frames Cell Events: 5148 mean_circ: 0.934138
Ran for 206550 frames Cell Events: 5157 mean_circ: 0.934101
Ran for 207550 frames Cell Events: 5178 mean_circ: 0.934107
Ran for 208050 frames Cell Events: 5187 mean_circ: 0.934181
Ran for 208550 frames Cell Events: 5197 mean_circ: 0.934227
Ran for 209050 frames Cell Events: 5209 mean_circ: 0.934255
Ran for 209550 frames Cell Events: 5219 mean_circ: 0.934142
Ran for 210050 frames Cell Events: 5238 mean_circ: 0.934184
Ran for 210550 frames Cell Events: 5245 mean_circ: 0.934218
Ran for 211050 frames Cell Events: 5257 mean_circ: 0.934226
Ran for 211550 frames Cell Events: 5270 mean_circ: 0.934195
Ran for 212550 frames Cell Events: 5288 mean_circ: 0.93422
Ran for 213050 frames Cell Events: 5296 mean_circ: 0.934226
Ran for 213550 frames Cell Events: 5304 mean_circ: 0.934231
Ran for 214050 frames Cell Events: 5318 mean_circ: 0.934273
Ran for 214550 frames Cell Events: 5329 mean_circ: 0.934285
Ran for 215050 frames Cell Events: 5346 mean_circ: 0.934323
Ran for 215550 frames Cell Events: 5357 mean_circ: 0.934302
Ran for 216050 frames Cell Events: 5371 mean_circ: 0.934326
Ran for 216550 frames Cell Events: 5379 mean_circ: 0.934315
Ran for 217050 frames Cell Events: 5394 mean_circ: 0.934315
Ran for 218050 frames Cell Events: 5426 mean_circ: 0.934236
Ran for 218550 frames Cell Events: 5437 mean_circ: 0.934247
Ran for 219050 frames Cell Events: 5454 mean_circ: 0.934261
Ran for 219550 frames Cell Events: 5463 mean_circ: 0.934256
Ran for 220050 frames Cell Events: 5475 mean_circ: 0.934275
Ran for 220550 frames Cell Events: 5485 mean_circ: 0.934273
Ran for 221050 frames Cell Events: 5497 mean_circ: 0.934299
Ran for 221550 frames Cell Events: 5509 mean_circ: 0.934283
Ran for 222550 frames Cell Events: 5535 mean_circ: 0.934286
Ran for 223050 frames Cell Events: 5544 mean_circ: 0.934287
Ran for 223550 frames Cell Events: 5551 mean_circ: 0.934305
Ran for 224050 frames Cell Events: 5569 mean_circ: 0.934308
Ran for 224550 frames Cell Events: 5589 mean_circ: 0.934319
Ran for 225050 frames Cell Events: 5600 mean_circ: 0.934309
Ran for 225550 frames Cell Events: 5613 mean_circ: 0.934277
Ran for 226550 frames Cell Events: 5643 mean_circ: 0.934331
Ran for 227050 frames Cell Events: 5661 mean_circ: 0.934343
Ran for 227550 frames Cell Events: 5679 mean_circ: 0.934345
Ran for 228050 frames Cell Events: 5688 mean_circ: 0.934409
Ran for 228550 frames Cell Events: 5697 mean_circ: 0.934412
Ran for 229050 frames Cell Events: 5706 mean_circ: 0.934436
Ran for 229550 frames Cell Events: 5721 mean_circ: 0.934432
Ran for 230050 frames Cell Events: 5740 mean_circ: 0.934405
Ran for 230550 frames Cell Events: 5760 mean_circ: 0.934397
Ran for 231050 frames Cell Events: 5778 mean_circ: 0.934316
Ran for 231550 frames Cell Events: 5797 mean_circ: 0.934335
Ran for 232050 frames Cell Events: 5814 mean_circ: 0.934326
Ran for 232550 frames Cell Events: 5830 mean_circ: 0.934264
Ran for 233050 frames Cell Events: 5839 mean_circ: 0.934292
Ran for 233550 frames Cell Events: 5868 mean_circ: 0.934307
Ran for 234050 frames Cell Events: 5883 mean_circ: 0.934349
Ran for 235050 frames Cell Events: 5913 mean_circ: 0.934304
Ran for 235550 frames Cell Events: 5925 mean_circ: 0.934306
Ran for 236050 frames Cell Events: 5931 mean_circ: 0.934328
Ran for 236550 frames Cell Events: 5941 mean_circ: 0.934348
Ran for 237050 frames Cell Events: 5958 mean_circ: 0.934357
Ran for 237550 frames Cell Events: 5980 mean_circ: 0.93433
Ran for 238050 frames Cell Events: 5993 mean_circ: 0.934328
Ran for 238550 frames Cell Events: 6010 mean_circ: 0.934339
Ran for 239050 frames Cell Events: 6017 mean_circ: 0.934325
Ran for 240550 frames Cell Events: 6047 mean_circ: 0.934333
Ran for 241050 frames Cell Events: 6060 mean_circ: 0.934365
Ran for 241550 frames Cell Events: 6070 mean_circ: 0.934345
Ran for 242550 frames Cell Events: 6099 mean_circ: 0.934342
Ran for 243050 frames Cell Events: 6115 mean_circ: 0.934283
Ran for 244050 frames Cell Events: 6131 mean_circ: 0.93427
Ran for 244550 frames Cell Events: 6143 mean_circ: 0.934253
Ran for 245050 frames Cell Events: 6160 mean_circ: 0.934271
Ran for 245550 frames Cell Events: 6172 mean_circ: 0.93429
Ran for 246050 frames Cell Events: 6190 mean_circ: 0.934288
Ran for 246550 frames Cell Events: 6202 mean_circ: 0.934315
Ran for 247550 frames Cell Events: 6234 mean_circ: 0.934252
Ran for 248050 frames Cell Events: 6244 mean_circ: 0.934278
Ran for 248550 frames Cell Events: 6253 mean_circ: 0.934279
Ran for 249050 frames Cell Events: 6264 mean_circ: 0.934288
Ran for 250050 frames Cell Events: 6281 mean_circ: 0.934324
Ran for 250550 frames Cell Events: 6290 mean_circ: 0.934312
Ran for 251050 frames Cell Events: 6298 mean_circ: 0.934308
Ran for 251550 frames Cell Events: 6303 mean_circ: 0.93431
Ran for 252550 frames Cell Events: 6342 mean_circ: 0.934307
Ran for 253050 frames Cell Events: 6357 mean_circ: 0.934299
Ran for 253550 frames Cell Events: 6370 mean_circ: 0.934359
Ran for 254050 frames Cell Events: 6384 mean_circ: 0.934376
Ran for 255050 frames Cell Events: 6403 mean_circ: 0.934334
Ran for 255550 frames Cell Events: 6413 mean_circ: 0.934369
Ran for 256050 frames Cell Events: 6422 mean_circ: 0.934386
Ran for 256550 frames Cell Events: 6437 mean_circ: 0.934404
Ran for 257050 frames Cell Events: 6447 mean_circ: 0.93441
Ran for 257550 frames Cell Events: 6456 mean_circ: 0.934405
Ran for 258050 frames Cell Events: 6471 mean_circ: 0.934424
Ran for 258550 frames Cell Events: 6479 mean_circ: 0.934423
Ran for 259050 frames Cell Events: 6493 mean_circ: 0.934426
Ran for 259550 frames Cell Events: 6502 mean_circ: 0.934436
Ran for 260050 frames Cell Events: 6513 mean_circ: 0.934419
Ran for 260550 frames Cell Events: 6524 mean_circ: 0.934435
Ran for 261050 frames Cell Events: 6536 mean_circ: 0.934443
Ran for 261550 frames Cell Events: 6543 mean_circ: 0.934443
Ran for 262050 frames Cell Events: 6564 mean_circ: 0.934431
Ran for 262550 frames Cell Events: 6575 mean_circ: 0.934432
Ran for 263050 frames Cell Events: 6587 mean_circ: 0.934439
Ran for 263550 frames Cell Events: 6603 mean_circ: 0.934448
Ran for 264050 frames Cell Events: 6615 mean_circ: 0.934482
Ran for 264550 frames Cell Events: 6622 mean_circ: 0.934479
Ran for 265050 frames Cell Events: 6639 mean_circ: 0.934508
Ran for 266050 frames Cell Events: 6660 mean_circ: 0.934527
Ran for 266550 frames Cell Events: 6670 mean_circ: 0.934528
Ran for 267050 frames Cell Events: 6683 mean_circ: 0.934548
Ran for 267550 frames Cell Events: 6701 mean_circ: 0.934535
Ran for 268050 frames Cell Events: 6716 mean_circ: 0.934552
Ran for 268550 frames Cell Events: 6738 mean_circ: 0.934563
Ran for 269050 frames Cell Events: 6756 mean_circ: 0.934581
Ran for 269550 frames Cell Events: 6774 mean_circ: 0.934608
Ran for 270050 frames Cell Events: 6801 mean_circ: 0.934586
Ran for 270550 frames Cell Events: 6816 mean_circ: 0.934572
Ran for 271550 frames Cell Events: 6838 mean_circ: 0.934534
Ran for 272050 frames Cell Events: 6842 mean_circ: 0.934529
Ran for 272550 frames Cell Events: 6851 mean_circ: 0.934525
Ran for 273050 frames Cell Events: 6862 mean_circ: 0.934536
Ran for 273550 frames Cell Events: 6874 mean_circ: 0.934528
Ran for 274050 frames Cell Events: 6885 mean_circ: 0.934538
Ran for 274550 frames Cell Events: 6894 mean_circ: 0.934556
Ran for 275050 frames Cell Events: 6907 mean_circ: 0.934584
Ran for 275550 frames Cell Events: 6924 mean_circ: 0.934578
Ran for 276050 frames Cell Events: 6935 mean_circ: 0.934568
Ran for 276550 frames Cell Events: 6939 mean_circ: 0.934537
Ran for 277050 frames Cell Events: 6950 mean_circ: 0.934564
Ran for 277550 frames Cell Events: 6962 mean_circ: 0.93458
Ran for 278050 frames Cell Events: 6972 mean_circ: 0.93459
Ran for 279050 frames Cell Events: 7001 mean_circ: 0.934571
Ran for 279550 frames Cell Events: 7013 mean_circ: 0.934582
Ran for 280550 frames Cell Events: 7057 mean_circ: 0.934591
Ran for 281550 frames Cell Events: 7102 mean_circ: 0.934497
Ran for 282050 frames Cell Events: 7127 mean_circ: 0.93453
Ran for 282550 frames Cell Events: 7142 mean_circ: 0.934552
Ran for 283050 frames Cell Events: 7158 mean_circ: 0.934616
Ran for 284050 frames Cell Events: 7166 mean_circ: 0.934622
End this measurment..
Stopping time: 2.23535e+008
****************************************
Measurement finished
Mean Circularitiy: 0.93458
Mean Area: 608.204
Mean FL-1 intensity: 3081.7
Mean FL-2 intensity: 4431.92
Mean FL-3 intensity: 0
frames processed: 284034
Total Time: 142316ms
Number of Runs (new bg img) 0
Frames collected: 284507
Skipped frames: 45637
Rescued Frames: 3852481
Samples DAQ: 71128657
Samples written: 142253582
Samples per Channel: 71126791
FPS: 1999.11
Samples per second: 499779
Expected samples/s: 500000
Events: 7177
Events per second: 50.4299
jumped back (PMT): 8
#Frames read, frequency
# 0 frames :376347
# 1 frames :173942
# 2 frames :5956
# 3 frames :1928
# 4 frames :1117
# 5 frames :474
# 6 frames :1927
# 7 frames :1973
# 8 frames :1228
# 9 frames :698
# 10 frames :969
# 11 frames :553
# 12 frames :529
# 13 frames :325
# 14 frames :223
# 15 frames :185
# 16 frames :124
# 17 frames :95
# 18 frames :83
# 19 frames :69
# 20 frames :51
# 21 frames :42
# 22 frames :26
# 23 frames :20
# 24 frames :18
# 25 frames :12
# 26 frames :8
# 27 frames :11
# 28 frames :5
# 29 frames :11
# 30 frames :7
# 31 frames :2
# 32 frames :1
# 33 frames :2
# 34 frames :6
# 35 frames :1
# 36 frames :1
# 38 frames :2
# 40 frames :1
# 41 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.1032
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0