Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_18.29.46
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "d0ae3d8cc79bc8b945c4218fc5bfab72",
"name": "M1_20170616_1908_set1_dsRNA_25b_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:30:07"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 7971 (max 7972) in '7971'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8811
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.3026e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 10 mean_circ: 0.939391
Ran for 1050 frames Cell Events: 18 mean_circ: 0.919964
Ran for 1550 frames Cell Events: 26 mean_circ: 0.913834
Ran for 2050 frames Cell Events: 33 mean_circ: 0.919623
Ran for 2550 frames Cell Events: 48 mean_circ: 0.918329
Ran for 3050 frames Cell Events: 59 mean_circ: 0.922743
Ran for 4050 frames Cell Events: 83 mean_circ: 0.927129
Ran for 4550 frames Cell Events: 97 mean_circ: 0.926011
Ran for 5050 frames Cell Events: 110 mean_circ: 0.926219
Ran for 5550 frames Cell Events: 115 mean_circ: 0.925432
Ran for 6050 frames Cell Events: 128 mean_circ: 0.922727
Ran for 6550 frames Cell Events: 137 mean_circ: 0.923177
Ran for 7050 frames Cell Events: 143 mean_circ: 0.923
Ran for 7550 frames Cell Events: 150 mean_circ: 0.922761
Ran for 8050 frames Cell Events: 156 mean_circ: 0.920755
Ran for 9050 frames Cell Events: 175 mean_circ: 0.921106
Ran for 9550 frames Cell Events: 187 mean_circ: 0.92162
Ran for 10050 frames Cell Events: 198 mean_circ: 0.920886
Ran for 10550 frames Cell Events: 206 mean_circ: 0.921839
Ran for 11050 frames Cell Events: 216 mean_circ: 0.921343
Ran for 11550 frames Cell Events: 221 mean_circ: 0.921055
Ran for 12050 frames Cell Events: 235 mean_circ: 0.92048
Ran for 12550 frames Cell Events: 247 mean_circ: 0.921006
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Ran for 13550 frames Cell Events: 278 mean_circ: 0.920847
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Ran for 23550 frames Cell Events: 486 mean_circ: 0.920869
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Ran for 25550 frames Cell Events: 524 mean_circ: 0.921628
Ran for 26050 frames Cell Events: 531 mean_circ: 0.921547
Ran for 26550 frames Cell Events: 535 mean_circ: 0.921408
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Ran for 28050 frames Cell Events: 576 mean_circ: 0.922524
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Ran for 29050 frames Cell Events: 589 mean_circ: 0.921962
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Ran for 30550 frames Cell Events: 626 mean_circ: 0.921557
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Ran for 32050 frames Cell Events: 668 mean_circ: 0.922114
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Ran for 37550 frames Cell Events: 763 mean_circ: 0.921302
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Ran for 55050 frames Cell Events: 1093 mean_circ: 0.921697
Ran for 56550 frames Cell Events: 1114 mean_circ: 0.921661
Ran for 57050 frames Cell Events: 1119 mean_circ: 0.921558
Ran for 57550 frames Cell Events: 1130 mean_circ: 0.921684
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Ran for 60550 frames Cell Events: 1177 mean_circ: 0.921557
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Ran for 62050 frames Cell Events: 1201 mean_circ: 0.921433
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Ran for 63550 frames Cell Events: 1229 mean_circ: 0.921169
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Ran for 65550 frames Cell Events: 1261 mean_circ: 0.92102
Ran for 66050 frames Cell Events: 1272 mean_circ: 0.921035
Ran for 66550 frames Cell Events: 1281 mean_circ: 0.921135
Ran for 67050 frames Cell Events: 1286 mean_circ: 0.921216
Ran for 67550 frames Cell Events: 1295 mean_circ: 0.921313
Ran for 68050 frames Cell Events: 1308 mean_circ: 0.921414
Ran for 69050 frames Cell Events: 1327 mean_circ: 0.921349
Ran for 69550 frames Cell Events: 1330 mean_circ: 0.921239
Ran for 70050 frames Cell Events: 1337 mean_circ: 0.921222
Ran for 71550 frames Cell Events: 1368 mean_circ: 0.921376
Ran for 72050 frames Cell Events: 1379 mean_circ: 0.921401
Ran for 72550 frames Cell Events: 1396 mean_circ: 0.921241
Ran for 73050 frames Cell Events: 1404 mean_circ: 0.921388
Ran for 73550 frames Cell Events: 1413 mean_circ: 0.921287
Ran for 74050 frames Cell Events: 1424 mean_circ: 0.921221
Ran for 75550 frames Cell Events: 1460 mean_circ: 0.921078
Ran for 77050 frames Cell Events: 1495 mean_circ: 0.921287
Ran for 77550 frames Cell Events: 1506 mean_circ: 0.921203
Ran for 78050 frames Cell Events: 1519 mean_circ: 0.921147
Ran for 78550 frames Cell Events: 1525 mean_circ: 0.920997
Ran for 80550 frames Cell Events: 1564 mean_circ: 0.921011
Ran for 81050 frames Cell Events: 1573 mean_circ: 0.92106
Ran for 82550 frames Cell Events: 1599 mean_circ: 0.921152
Ran for 83050 frames Cell Events: 1607 mean_circ: 0.921034
Ran for 83550 frames Cell Events: 1621 mean_circ: 0.920968
Ran for 84050 frames Cell Events: 1630 mean_circ: 0.920828
Ran for 84550 frames Cell Events: 1642 mean_circ: 0.920994
Ran for 85050 frames Cell Events: 1650 mean_circ: 0.921173
Ran for 85550 frames Cell Events: 1661 mean_circ: 0.921081
Ran for 86050 frames Cell Events: 1665 mean_circ: 0.921099
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Ran for 87050 frames Cell Events: 1687 mean_circ: 0.920774
Ran for 87550 frames Cell Events: 1697 mean_circ: 0.920898
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Ran for 91050 frames Cell Events: 1775 mean_circ: 0.920485
Ran for 92050 frames Cell Events: 1802 mean_circ: 0.9205
Ran for 92550 frames Cell Events: 1811 mean_circ: 0.920604
Ran for 93050 frames Cell Events: 1816 mean_circ: 0.920591
Ran for 93550 frames Cell Events: 1835 mean_circ: 0.920538
Ran for 94050 frames Cell Events: 1843 mean_circ: 0.920507
Ran for 95050 frames Cell Events: 1865 mean_circ: 0.920693
Ran for 95550 frames Cell Events: 1875 mean_circ: 0.920862
Ran for 96550 frames Cell Events: 1894 mean_circ: 0.920694
Ran for 97050 frames Cell Events: 1898 mean_circ: 0.920749
Ran for 97550 frames Cell Events: 1912 mean_circ: 0.920687
Ran for 98050 frames Cell Events: 1918 mean_circ: 0.920683
Ran for 98550 frames Cell Events: 1932 mean_circ: 0.920763
Ran for 99050 frames Cell Events: 1945 mean_circ: 0.920753
Ran for 99550 frames Cell Events: 1950 mean_circ: 0.92079
Ran for 100550 frames Cell Events: 1967 mean_circ: 0.92073
Ran for 101550 frames Cell Events: 1982 mean_circ: 0.920712
Ran for 102050 frames Cell Events: 1990 mean_circ: 0.920744
Ran for 103050 frames Cell Events: 2018 mean_circ: 0.920473
Ran for 103550 frames Cell Events: 2023 mean_circ: 0.920498
Ran for 104550 frames Cell Events: 2036 mean_circ: 0.920546
Ran for 105050 frames Cell Events: 2047 mean_circ: 0.920598
Ran for 105550 frames Cell Events: 2052 mean_circ: 0.920616
Ran for 106550 frames Cell Events: 2074 mean_circ: 0.920613
Ran for 107050 frames Cell Events: 2084 mean_circ: 0.920601
Ran for 107550 frames Cell Events: 2090 mean_circ: 0.920697
Ran for 108050 frames Cell Events: 2098 mean_circ: 0.92068
Ran for 108550 frames Cell Events: 2107 mean_circ: 0.920578
Ran for 109050 frames Cell Events: 2115 mean_circ: 0.920599
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Ran for 110050 frames Cell Events: 2142 mean_circ: 0.920725
Ran for 112050 frames Cell Events: 2213 mean_circ: 0.920991
Ran for 112550 frames Cell Events: 2216 mean_circ: 0.921028
Ran for 113050 frames Cell Events: 2226 mean_circ: 0.920942
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Ran for 115050 frames Cell Events: 2274 mean_circ: 0.920813
Ran for 115550 frames Cell Events: 2283 mean_circ: 0.920852
Ran for 116050 frames Cell Events: 2293 mean_circ: 0.920793
Ran for 116550 frames Cell Events: 2297 mean_circ: 0.920775
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Ran for 120050 frames Cell Events: 2397 mean_circ: 0.920751
Ran for 121550 frames Cell Events: 2417 mean_circ: 0.920596
Ran for 122050 frames Cell Events: 2431 mean_circ: 0.920566
Ran for 123050 frames Cell Events: 2456 mean_circ: 0.920527
Ran for 123550 frames Cell Events: 2465 mean_circ: 0.920466
Ran for 125050 frames Cell Events: 2495 mean_circ: 0.920604
Ran for 125550 frames Cell Events: 2502 mean_circ: 0.920648
Ran for 126550 frames Cell Events: 2531 mean_circ: 0.920632
Ran for 127050 frames Cell Events: 2548 mean_circ: 0.920734
Ran for 127550 frames Cell Events: 2554 mean_circ: 0.920684
Ran for 128050 frames Cell Events: 2562 mean_circ: 0.920804
Ran for 128550 frames Cell Events: 2569 mean_circ: 0.920839
Ran for 129050 frames Cell Events: 2577 mean_circ: 0.920727
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Ran for 133050 frames Cell Events: 2643 mean_circ: 0.920962
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Ran for 134050 frames Cell Events: 2663 mean_circ: 0.920912
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Ran for 143550 frames Cell Events: 2875 mean_circ: 0.920576
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Ran for 146550 frames Cell Events: 2940 mean_circ: 0.92059
Ran for 147550 frames Cell Events: 2972 mean_circ: 0.920513
Ran for 148050 frames Cell Events: 2984 mean_circ: 0.920593
Ran for 148550 frames Cell Events: 2994 mean_circ: 0.920478
Ran for 149050 frames Cell Events: 3003 mean_circ: 0.920503
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Ran for 150050 frames Cell Events: 3021 mean_circ: 0.920596
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Ran for 151550 frames Cell Events: 3049 mean_circ: 0.920584
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Ran for 152550 frames Cell Events: 3077 mean_circ: 0.920625
Ran for 153050 frames Cell Events: 3106 mean_circ: 0.920616
Ran for 153550 frames Cell Events: 3125 mean_circ: 0.920642
Ran for 154550 frames Cell Events: 3146 mean_circ: 0.920679
Ran for 155050 frames Cell Events: 3160 mean_circ: 0.920719
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Ran for 156050 frames Cell Events: 3182 mean_circ: 0.920681
Ran for 156550 frames Cell Events: 3192 mean_circ: 0.920619
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Ran for 158050 frames Cell Events: 3231 mean_circ: 0.920498
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Ran for 160050 frames Cell Events: 3264 mean_circ: 0.920566
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Ran for 161550 frames Cell Events: 3283 mean_circ: 0.920599
Ran for 162050 frames Cell Events: 3291 mean_circ: 0.9206
Ran for 163050 frames Cell Events: 3316 mean_circ: 0.920624
Ran for 163550 frames Cell Events: 3320 mean_circ: 0.920655
Ran for 164050 frames Cell Events: 3330 mean_circ: 0.920696
Ran for 164550 frames Cell Events: 3341 mean_circ: 0.920682
Ran for 165050 frames Cell Events: 3350 mean_circ: 0.920704
Ran for 167050 frames Cell Events: 3401 mean_circ: 0.920757
Ran for 167550 frames Cell Events: 3414 mean_circ: 0.920782
Ran for 168050 frames Cell Events: 3429 mean_circ: 0.920818
Ran for 169050 frames Cell Events: 3449 mean_circ: 0.920716
Ran for 169550 frames Cell Events: 3458 mean_circ: 0.920731
Ran for 170050 frames Cell Events: 3468 mean_circ: 0.920805
Ran for 172050 frames Cell Events: 3498 mean_circ: 0.920883
Ran for 172550 frames Cell Events: 3503 mean_circ: 0.920886
Ran for 173050 frames Cell Events: 3514 mean_circ: 0.920936
Ran for 174050 frames Cell Events: 3531 mean_circ: 0.920984
Ran for 175050 frames Cell Events: 3555 mean_circ: 0.92097
Ran for 175550 frames Cell Events: 3570 mean_circ: 0.920883
Ran for 176050 frames Cell Events: 3583 mean_circ: 0.920927
Ran for 177050 frames Cell Events: 3604 mean_circ: 0.920968
Ran for 177550 frames Cell Events: 3616 mean_circ: 0.920973
Ran for 178550 frames Cell Events: 3633 mean_circ: 0.921072
Ran for 179050 frames Cell Events: 3642 mean_circ: 0.921098
Ran for 180050 frames Cell Events: 3664 mean_circ: 0.921093
Ran for 180550 frames Cell Events: 3672 mean_circ: 0.921065
Ran for 181050 frames Cell Events: 3680 mean_circ: 0.921079
Ran for 181550 frames Cell Events: 3696 mean_circ: 0.921077
Ran for 182550 frames Cell Events: 3717 mean_circ: 0.921005
Ran for 183550 frames Cell Events: 3735 mean_circ: 0.920933
Ran for 184050 frames Cell Events: 3745 mean_circ: 0.92097
Ran for 184550 frames Cell Events: 3753 mean_circ: 0.921029
Ran for 185550 frames Cell Events: 3771 mean_circ: 0.921059
Ran for 186050 frames Cell Events: 3787 mean_circ: 0.921086
Ran for 186550 frames Cell Events: 3796 mean_circ: 0.921026
Ran for 187050 frames Cell Events: 3803 mean_circ: 0.921053
Ran for 188550 frames Cell Events: 3827 mean_circ: 0.921064
Ran for 189050 frames Cell Events: 3838 mean_circ: 0.921053
Ran for 190550 frames Cell Events: 3869 mean_circ: 0.921007
Ran for 191050 frames Cell Events: 3876 mean_circ: 0.921035
Ran for 191550 frames Cell Events: 3882 mean_circ: 0.921044
Ran for 192050 frames Cell Events: 3889 mean_circ: 0.921083
Ran for 192550 frames Cell Events: 3895 mean_circ: 0.921078
Ran for 193050 frames Cell Events: 3896 mean_circ: 0.921061
Ran for 193550 frames Cell Events: 3899 mean_circ: 0.921
Ran for 194050 frames Cell Events: 3911 mean_circ: 0.920999
Ran for 194550 frames Cell Events: 3925 mean_circ: 0.920987
Ran for 195550 frames Cell Events: 3938 mean_circ: 0.920924
Ran for 196050 frames Cell Events: 3946 mean_circ: 0.920947
Ran for 196550 frames Cell Events: 3962 mean_circ: 0.920864
Ran for 197050 frames Cell Events: 3971 mean_circ: 0.920925
Ran for 197550 frames Cell Events: 3981 mean_circ: 0.920919
Ran for 198550 frames Cell Events: 3999 mean_circ: 0.920926
Ran for 199550 frames Cell Events: 4025 mean_circ: 0.920878
Ran for 200050 frames Cell Events: 4034 mean_circ: 0.920796
Ran for 200550 frames Cell Events: 4045 mean_circ: 0.920825
Ran for 201050 frames Cell Events: 4063 mean_circ: 0.920803
Ran for 202050 frames Cell Events: 4085 mean_circ: 0.920506
Ran for 202550 frames Cell Events: 4092 mean_circ: 0.920542
Ran for 203050 frames Cell Events: 4106 mean_circ: 0.920553
Ran for 204050 frames Cell Events: 4139 mean_circ: 0.920544
Ran for 204550 frames Cell Events: 4150 mean_circ: 0.920502
Ran for 205550 frames Cell Events: 4170 mean_circ: 0.920541
Ran for 206050 frames Cell Events: 4186 mean_circ: 0.920583
Ran for 207050 frames Cell Events: 4208 mean_circ: 0.920634
Ran for 207550 frames Cell Events: 4216 mean_circ: 0.920636
Ran for 208050 frames Cell Events: 4231 mean_circ: 0.92066
Ran for 209550 frames Cell Events: 4269 mean_circ: 0.920698
Ran for 210050 frames Cell Events: 4282 mean_circ: 0.92068
Ran for 210550 frames Cell Events: 4291 mean_circ: 0.920649
Ran for 211050 frames Cell Events: 4300 mean_circ: 0.920682
Ran for 211550 frames Cell Events: 4304 mean_circ: 0.920672
Ran for 212050 frames Cell Events: 4309 mean_circ: 0.920679
Ran for 212550 frames Cell Events: 4317 mean_circ: 0.920711
Ran for 213050 frames Cell Events: 4329 mean_circ: 0.920677
Ran for 213550 frames Cell Events: 4336 mean_circ: 0.92066
Ran for 214050 frames Cell Events: 4337 mean_circ: 0.920673
Ran for 214550 frames Cell Events: 4342 mean_circ: 0.920677
Ran for 215050 frames Cell Events: 4348 mean_circ: 0.920646
Ran for 215550 frames Cell Events: 4356 mean_circ: 0.920643
Ran for 216050 frames Cell Events: 4366 mean_circ: 0.920608
Ran for 216550 frames Cell Events: 4372 mean_circ: 0.920588
Ran for 217050 frames Cell Events: 4382 mean_circ: 0.920488
Ran for 217550 frames Cell Events: 4401 mean_circ: 0.920607
Ran for 218550 frames Cell Events: 4420 mean_circ: 0.920622
Ran for 219050 frames Cell Events: 4433 mean_circ: 0.920672
Ran for 219550 frames Cell Events: 4439 mean_circ: 0.920599
Ran for 220050 frames Cell Events: 4442 mean_circ: 0.920586
Ran for 221550 frames Cell Events: 4474 mean_circ: 0.920578
Ran for 223050 frames Cell Events: 4503 mean_circ: 0.920624
Ran for 224050 frames Cell Events: 4524 mean_circ: 0.920649
Ran for 224550 frames Cell Events: 4529 mean_circ: 0.920658
Ran for 225050 frames Cell Events: 4536 mean_circ: 0.920668
Ran for 225550 frames Cell Events: 4544 mean_circ: 0.920692
Ran for 226550 frames Cell Events: 4552 mean_circ: 0.920704
Ran for 227050 frames Cell Events: 4557 mean_circ: 0.920714
Ran for 228050 frames Cell Events: 4569 mean_circ: 0.920709
Ran for 228550 frames Cell Events: 4577 mean_circ: 0.92073
Ran for 229050 frames Cell Events: 4586 mean_circ: 0.920766
Ran for 230050 frames Cell Events: 4609 mean_circ: 0.920857
Ran for 230550 frames Cell Events: 4613 mean_circ: 0.920869
Ran for 231050 frames Cell Events: 4622 mean_circ: 0.920932
Ran for 232050 frames Cell Events: 4633 mean_circ: 0.920912
Ran for 233550 frames Cell Events: 4666 mean_circ: 0.92079
Ran for 234050 frames Cell Events: 4677 mean_circ: 0.920785
Ran for 235050 frames Cell Events: 4692 mean_circ: 0.920793
Ran for 235550 frames Cell Events: 4699 mean_circ: 0.920794
Ran for 236550 frames Cell Events: 4714 mean_circ: 0.920817
Ran for 237050 frames Cell Events: 4722 mean_circ: 0.920825
Ran for 237550 frames Cell Events: 4726 mean_circ: 0.920851
Ran for 238550 frames Cell Events: 4750 mean_circ: 0.920861
Ran for 239050 frames Cell Events: 4758 mean_circ: 0.920907
Ran for 239550 frames Cell Events: 4767 mean_circ: 0.920896
Ran for 241050 frames Cell Events: 4789 mean_circ: 0.920778
Ran for 241550 frames Cell Events: 4791 mean_circ: 0.920778
Ran for 242050 frames Cell Events: 4793 mean_circ: 0.920749
Ran for 242550 frames Cell Events: 4796 mean_circ: 0.920777
Ran for 243550 frames Cell Events: 4817 mean_circ: 0.920815
Ran for 244050 frames Cell Events: 4823 mean_circ: 0.920821
Ran for 244550 frames Cell Events: 4832 mean_circ: 0.92072
Ran for 245050 frames Cell Events: 4840 mean_circ: 0.920662
Ran for 245550 frames Cell Events: 4854 mean_circ: 0.920549
Ran for 246050 frames Cell Events: 4864 mean_circ: 0.920476
Ran for 246550 frames Cell Events: 4871 mean_circ: 0.920473
Ran for 247050 frames Cell Events: 4883 mean_circ: 0.920469
Ran for 247550 frames Cell Events: 4896 mean_circ: 0.9205
Ran for 248050 frames Cell Events: 4911 mean_circ: 0.920447
Ran for 248550 frames Cell Events: 4921 mean_circ: 0.920495
Ran for 249050 frames Cell Events: 4931 mean_circ: 0.920455
Ran for 250050 frames Cell Events: 4958 mean_circ: 0.920478
Ran for 250550 frames Cell Events: 4968 mean_circ: 0.920466
Ran for 251050 frames Cell Events: 4973 mean_circ: 0.920484
Ran for 251550 frames Cell Events: 4982 mean_circ: 0.920458
Ran for 252050 frames Cell Events: 4983 mean_circ: 0.920458
Ran for 252550 frames Cell Events: 4990 mean_circ: 0.9204
Ran for 253050 frames Cell Events: 5001 mean_circ: 0.920435
Ran for 253550 frames Cell Events: 5013 mean_circ: 0.920418
Ran for 254050 frames Cell Events: 5023 mean_circ: 0.920434
Ran for 254550 frames Cell Events: 5031 mean_circ: 0.920424
Ran for 255550 frames Cell Events: 5052 mean_circ: 0.92041
Ran for 256050 frames Cell Events: 5073 mean_circ: 0.920405
Ran for 256550 frames Cell Events: 5084 mean_circ: 0.920455
Ran for 259050 frames Cell Events: 5122 mean_circ: 0.920425
Ran for 260050 frames Cell Events: 5140 mean_circ: 0.920346
Ran for 260550 frames Cell Events: 5149 mean_circ: 0.920367
Ran for 261050 frames Cell Events: 5160 mean_circ: 0.92032
Ran for 262050 frames Cell Events: 5184 mean_circ: 0.920317
Ran for 262550 frames Cell Events: 5188 mean_circ: 0.920206
Ran for 263550 frames Cell Events: 5213 mean_circ: 0.920103
Ran for 264050 frames Cell Events: 5221 mean_circ: 0.920064
Ran for 264550 frames Cell Events: 5230 mean_circ: 0.920012
Ran for 265050 frames Cell Events: 5245 mean_circ: 0.920098
Ran for 265550 frames Cell Events: 5264 mean_circ: 0.920143
Ran for 266050 frames Cell Events: 5282 mean_circ: 0.920118
Ran for 267050 frames Cell Events: 5304 mean_circ: 0.92018
Ran for 267550 frames Cell Events: 5314 mean_circ: 0.920227
Ran for 268050 frames Cell Events: 5330 mean_circ: 0.920214
Ran for 269050 frames Cell Events: 5349 mean_circ: 0.920117
Ran for 271050 frames Cell Events: 5397 mean_circ: 0.920171
Ran for 271550 frames Cell Events: 5413 mean_circ: 0.920237
Ran for 272050 frames Cell Events: 5428 mean_circ: 0.920283
Ran for 272550 frames Cell Events: 5436 mean_circ: 0.920282
Ran for 273550 frames Cell Events: 5459 mean_circ: 0.92034
Ran for 274050 frames Cell Events: 5463 mean_circ: 0.920367
Ran for 275050 frames Cell Events: 5478 mean_circ: 0.920313
Ran for 275550 frames Cell Events: 5495 mean_circ: 0.920273
Ran for 276050 frames Cell Events: 5505 mean_circ: 0.920228
Ran for 277050 frames Cell Events: 5529 mean_circ: 0.92023
Ran for 278050 frames Cell Events: 5549 mean_circ: 0.920288
Ran for 278550 frames Cell Events: 5561 mean_circ: 0.920329
Ran for 279050 frames Cell Events: 5569 mean_circ: 0.920273
Ran for 279550 frames Cell Events: 5584 mean_circ: 0.920308
Ran for 280050 frames Cell Events: 5595 mean_circ: 0.920352
Ran for 280550 frames Cell Events: 5603 mean_circ: 0.920367
Ran for 281050 frames Cell Events: 5612 mean_circ: 0.920409
Ran for 281550 frames Cell Events: 5626 mean_circ: 0.920324
Ran for 282550 frames Cell Events: 5650 mean_circ: 0.92035
Ran for 283050 frames Cell Events: 5666 mean_circ: 0.920282
Ran for 283550 frames Cell Events: 5686 mean_circ: 0.920316
Ran for 285550 frames Cell Events: 5739 mean_circ: 0.920336
Ran for 286050 frames Cell Events: 5749 mean_circ: 0.920346
Ran for 286550 frames Cell Events: 5760 mean_circ: 0.920405
Ran for 287050 frames Cell Events: 5772 mean_circ: 0.920411
Ran for 287550 frames Cell Events: 5780 mean_circ: 0.920414
Ran for 288050 frames Cell Events: 5790 mean_circ: 0.920395
Ran for 288550 frames Cell Events: 5797 mean_circ: 0.920417
Ran for 289050 frames Cell Events: 5807 mean_circ: 0.920421
Ran for 289550 frames Cell Events: 5818 mean_circ: 0.920471
Ran for 290050 frames Cell Events: 5834 mean_circ: 0.920496
Ran for 291050 frames Cell Events: 5847 mean_circ: 0.920506
Ran for 291550 frames Cell Events: 5854 mean_circ: 0.920514
Ran for 293050 frames Cell Events: 5886 mean_circ: 0.920528
Ran for 294050 frames Cell Events: 5909 mean_circ: 0.920539
Ran for 294550 frames Cell Events: 5918 mean_circ: 0.920559
Ran for 296550 frames Cell Events: 5956 mean_circ: 0.920515
Ran for 297050 frames Cell Events: 5962 mean_circ: 0.920499
Ran for 297550 frames Cell Events: 5970 mean_circ: 0.920498
Ran for 298050 frames Cell Events: 5977 mean_circ: 0.92048
Ran for 298550 frames Cell Events: 5987 mean_circ: 0.920498
Ran for 299050 frames Cell Events: 6004 mean_circ: 0.920503
Ran for 299550 frames Cell Events: 6016 mean_circ: 0.920464
Ran for 300050 frames Cell Events: 6028 mean_circ: 0.920458
Ran for 300550 frames Cell Events: 6035 mean_circ: 0.920466
Ran for 301550 frames Cell Events: 6051 mean_circ: 0.920494
Ran for 302050 frames Cell Events: 6061 mean_circ: 0.920489
Ran for 302550 frames Cell Events: 6071 mean_circ: 0.920504
Ran for 303050 frames Cell Events: 6081 mean_circ: 0.920524
Ran for 304050 frames Cell Events: 6103 mean_circ: 0.920562
Ran for 305050 frames Cell Events: 6120 mean_circ: 0.920546
Ran for 305550 frames Cell Events: 6126 mean_circ: 0.920543
Ran for 307550 frames Cell Events: 6176 mean_circ: 0.920475
Ran for 308050 frames Cell Events: 6182 mean_circ: 0.920504
Ran for 308550 frames Cell Events: 6190 mean_circ: 0.92051
Ran for 309050 frames Cell Events: 6200 mean_circ: 0.920539
Ran for 310050 frames Cell Events: 6221 mean_circ: 0.920592
Ran for 310550 frames Cell Events: 6227 mean_circ: 0.920573
Ran for 311050 frames Cell Events: 6235 mean_circ: 0.920597
Ran for 311550 frames Cell Events: 6242 mean_circ: 0.920592
Ran for 312550 frames Cell Events: 6269 mean_circ: 0.920486
Ran for 313050 frames Cell Events: 6276 mean_circ: 0.920527
Ran for 314550 frames Cell Events: 6312 mean_circ: 0.920538
Ran for 315050 frames Cell Events: 6317 mean_circ: 0.920542
Ran for 315550 frames Cell Events: 6327 mean_circ: 0.920515
Ran for 316050 frames Cell Events: 6336 mean_circ: 0.920523
Ran for 316550 frames Cell Events: 6340 mean_circ: 0.920538
Ran for 317550 frames Cell Events: 6358 mean_circ: 0.92054
Ran for 318050 frames Cell Events: 6365 mean_circ: 0.920553
Ran for 318550 frames Cell Events: 6372 mean_circ: 0.920544
Ran for 319050 frames Cell Events: 6379 mean_circ: 0.920558
Ran for 319550 frames Cell Events: 6386 mean_circ: 0.920588
Ran for 320050 frames Cell Events: 6394 mean_circ: 0.920572
Ran for 320550 frames Cell Events: 6405 mean_circ: 0.920545
Ran for 321050 frames Cell Events: 6413 mean_circ: 0.920552
Ran for 321550 frames Cell Events: 6424 mean_circ: 0.920554
Ran for 322550 frames Cell Events: 6447 mean_circ: 0.920582
Ran for 323050 frames Cell Events: 6451 mean_circ: 0.920613
Ran for 324050 frames Cell Events: 6469 mean_circ: 0.920627
Ran for 324550 frames Cell Events: 6475 mean_circ: 0.920638
Ran for 325050 frames Cell Events: 6478 mean_circ: 0.920622
Ran for 325550 frames Cell Events: 6483 mean_circ: 0.920595
Ran for 326050 frames Cell Events: 6484 mean_circ: 0.920611
Ran for 326550 frames Cell Events: 6490 mean_circ: 0.920621
Ran for 327050 frames Cell Events: 6496 mean_circ: 0.920621
Ran for 327550 frames Cell Events: 6499 mean_circ: 0.92059
Ran for 328050 frames Cell Events: 6505 mean_circ: 0.920587
Ran for 328550 frames Cell Events: 6508 mean_circ: 0.92055
Ran for 329050 frames Cell Events: 6518 mean_circ: 0.920572
Ran for 330050 frames Cell Events: 6542 mean_circ: 0.920512
Ran for 330550 frames Cell Events: 6547 mean_circ: 0.920498
Ran for 331550 frames Cell Events: 6573 mean_circ: 0.920513
Ran for 332550 frames Cell Events: 6598 mean_circ: 0.920535
Ran for 333050 frames Cell Events: 6604 mean_circ: 0.920545
Ran for 333550 frames Cell Events: 6616 mean_circ: 0.920584
Ran for 334050 frames Cell Events: 6624 mean_circ: 0.920565
Ran for 334550 frames Cell Events: 6637 mean_circ: 0.920607
Ran for 336550 frames Cell Events: 6687 mean_circ: 0.9207
Ran for 337050 frames Cell Events: 6699 mean_circ: 0.920672
Ran for 338050 frames Cell Events: 6725 mean_circ: 0.920748
Ran for 338550 frames Cell Events: 6736 mean_circ: 0.920757
Ran for 339050 frames Cell Events: 6740 mean_circ: 0.920743
Ran for 340050 frames Cell Events: 6767 mean_circ: 0.920767
Ran for 340550 frames Cell Events: 6780 mean_circ: 0.920806
Ran for 341050 frames Cell Events: 6792 mean_circ: 0.920837
Ran for 342050 frames Cell Events: 6817 mean_circ: 0.920877
Ran for 342550 frames Cell Events: 6829 mean_circ: 0.920865
Ran for 343050 frames Cell Events: 6840 mean_circ: 0.920851
Ran for 343550 frames Cell Events: 6851 mean_circ: 0.920888
Ran for 344550 frames Cell Events: 6868 mean_circ: 0.920896
Ran for 345050 frames Cell Events: 6878 mean_circ: 0.920912
Ran for 346050 frames Cell Events: 6902 mean_circ: 0.920873
Ran for 346550 frames Cell Events: 6917 mean_circ: 0.920902
Ran for 347050 frames Cell Events: 6930 mean_circ: 0.920942
Ran for 347550 frames Cell Events: 6934 mean_circ: 0.920974
Ran for 348050 frames Cell Events: 6947 mean_circ: 0.920986
Ran for 348550 frames Cell Events: 6950 mean_circ: 0.920998
Ran for 349050 frames Cell Events: 6960 mean_circ: 0.920995
Ran for 349550 frames Cell Events: 6967 mean_circ: 0.920971
Ran for 350050 frames Cell Events: 6977 mean_circ: 0.920972
Ran for 350550 frames Cell Events: 6989 mean_circ: 0.920938
Ran for 351050 frames Cell Events: 7001 mean_circ: 0.920941
Ran for 351550 frames Cell Events: 7012 mean_circ: 0.920951
Ran for 352050 frames Cell Events: 7017 mean_circ: 0.920949
Ran for 352550 frames Cell Events: 7024 mean_circ: 0.920958
Ran for 353550 frames Cell Events: 7037 mean_circ: 0.920915
Ran for 354050 frames Cell Events: 7045 mean_circ: 0.920938
Ran for 355550 frames Cell Events: 7070 mean_circ: 0.920921
Ran for 356550 frames Cell Events: 7085 mean_circ: 0.920913
Ran for 357050 frames Cell Events: 7095 mean_circ: 0.92089
Ran for 358050 frames Cell Events: 7112 mean_circ: 0.92094
Ran for 360050 frames Cell Events: 7171 mean_circ: 0.920963
Ran for 360550 frames Cell Events: 7177 mean_circ: 0.920985
Ran for 361550 frames Cell Events: 7207 mean_circ: 0.920931
Ran for 362050 frames Cell Events: 7219 mean_circ: 0.920954
Ran for 363050 frames Cell Events: 7243 mean_circ: 0.920967
Ran for 363550 frames Cell Events: 7256 mean_circ: 0.920972
Ran for 364550 frames Cell Events: 7285 mean_circ: 0.920934
Ran for 365050 frames Cell Events: 7305 mean_circ: 0.920956
Ran for 365550 frames Cell Events: 7320 mean_circ: 0.920936
Ran for 366050 frames Cell Events: 7334 mean_circ: 0.920978
Ran for 366550 frames Cell Events: 7345 mean_circ: 0.920994
Ran for 367050 frames Cell Events: 7355 mean_circ: 0.921
Ran for 367550 frames Cell Events: 7371 mean_circ: 0.921054
Ran for 368050 frames Cell Events: 7380 mean_circ: 0.921017
Ran for 368550 frames Cell Events: 7388 mean_circ: 0.921004
Ran for 369550 frames Cell Events: 7408 mean_circ: 0.920983
Ran for 370050 frames Cell Events: 7426 mean_circ: 0.920985
Ran for 370550 frames Cell Events: 7441 mean_circ: 0.921032
Ran for 371550 frames Cell Events: 7463 mean_circ: 0.921052
Ran for 372550 frames Cell Events: 7486 mean_circ: 0.921094
Ran for 373050 frames Cell Events: 7497 mean_circ: 0.921059
Ran for 373550 frames Cell Events: 7511 mean_circ: 0.921076
Ran for 374050 frames Cell Events: 7517 mean_circ: 0.921091
Ran for 374550 frames Cell Events: 7520 mean_circ: 0.921087
Ran for 375550 frames Cell Events: 7529 mean_circ: 0.921091
Ran for 376550 frames Cell Events: 7552 mean_circ: 0.921049
Ran for 377050 frames Cell Events: 7564 mean_circ: 0.92107
Ran for 377550 frames Cell Events: 7567 mean_circ: 0.921067
Ran for 378550 frames Cell Events: 7595 mean_circ: 0.921026
Ran for 379050 frames Cell Events: 7613 mean_circ: 0.920999
Ran for 380050 frames Cell Events: 7647 mean_circ: 0.920959
Ran for 380550 frames Cell Events: 7660 mean_circ: 0.920975
Ran for 381050 frames Cell Events: 7674 mean_circ: 0.920978
Ran for 381550 frames Cell Events: 7687 mean_circ: 0.921002
Ran for 382550 frames Cell Events: 7712 mean_circ: 0.921034
Ran for 383050 frames Cell Events: 7720 mean_circ: 0.921041
Ran for 383550 frames Cell Events: 7733 mean_circ: 0.921026
Ran for 384050 frames Cell Events: 7746 mean_circ: 0.920998
Ran for 384550 frames Cell Events: 7758 mean_circ: 0.921021
Ran for 385550 frames Cell Events: 7785 mean_circ: 0.92105
Ran for 386550 frames Cell Events: 7821 mean_circ: 0.921048
Ran for 387050 frames Cell Events: 7830 mean_circ: 0.921057
Ran for 387550 frames Cell Events: 7838 mean_circ: 0.921066
Ran for 388550 frames Cell Events: 7863 mean_circ: 0.921117
Ran for 389050 frames Cell Events: 7875 mean_circ: 0.921141
Ran for 389550 frames Cell Events: 7880 mean_circ: 0.921134
Ran for 390050 frames Cell Events: 7896 mean_circ: 0.921141
Ran for 390550 frames Cell Events: 7903 mean_circ: 0.921138
Ran for 391050 frames Cell Events: 7911 mean_circ: 0.921138
Ran for 391550 frames Cell Events: 7927 mean_circ: 0.921118
Ran for 392050 frames Cell Events: 7938 mean_circ: 0.921133
Ran for 392550 frames Cell Events: 7948 mean_circ: 0.921147
Ran for 393050 frames Cell Events: 7965 mean_circ: 0.921094
End this measurment..
Stopping time: 2.30457e+008
****************************************
Measurement finished
Mean Circularitiy: 0.921101
Mean Area: 773.074
Mean FL-1 intensity: 2893.43
Mean FL-2 intensity: 3762.08
Mean FL-3 intensity: 0
frames processed: 391122
Total Time: 196730ms
Number of Runs (new bg img) 0
Frames collected: 393340
Skipped frames: 68863
Rescued Frames: 5668227
Samples DAQ: 98335140
Samples written: 196670164
Samples per Channel: 98335082
FPS: 1999.39
Samples per second: 499848
Expected samples/s: 500000
Events: 7972
Events per second: 40.5225
jumped back (PMT): 7551
#Frames read, frequency
# 0 frames :535808
# 1 frames :224689
# 2 frames :7608
# 3 frames :3391
# 4 frames :1925
# 5 frames :1099
# 6 frames :1644
# 7 frames :1769
# 8 frames :1491
# 9 frames :1017
# 10 frames :1304
# 11 frames :1001
# 12 frames :941
# 13 frames :558
# 14 frames :438
# 15 frames :314
# 16 frames :236
# 17 frames :239
# 18 frames :196
# 19 frames :177
# 20 frames :142
# 21 frames :122
# 22 frames :102
# 23 frames :55
# 24 frames :44
# 25 frames :36
# 26 frames :25
# 27 frames :29
# 28 frames :18
# 29 frames :11
# 30 frames :14
# 31 frames :14
# 32 frames :12
# 33 frames :8
# 34 frames :9
# 35 frames :9
# 36 frames :6
# 37 frames :4
# 38 frames :3
# 39 frames :3
# 40 frames :2
# 41 frames :4
# 42 frames :1
# 43 frames :1
# 44 frames :1
# 45 frames :1
# 46 frames :1
# 47 frames :1
# 51 frames :3
# 53 frames :1
# 55 frames :1
# 57 frames :2
# 72 frames :1
# 73 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8811
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0