Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_18.31.09
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "e2e85167df704ca59edbedfee653a33e",
"name": "M1_20170616_1936_dsRNA_P3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:31:32"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8862 (max 8863) in '8862'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6997
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.31967e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 26 mean_circ: 0.930971
Ran for 2050 frames Cell Events: 58 mean_circ: 0.934355
Ran for 2550 frames Cell Events: 65 mean_circ: 0.936654
Ran for 3050 frames Cell Events: 82 mean_circ: 0.937547
Ran for 4550 frames Cell Events: 132 mean_circ: 0.939372
Ran for 5050 frames Cell Events: 147 mean_circ: 0.93921
Ran for 5550 frames Cell Events: 168 mean_circ: 0.939693
Ran for 6550 frames Cell Events: 214 mean_circ: 0.940851
Ran for 7550 frames Cell Events: 248 mean_circ: 0.941744
Ran for 9550 frames Cell Events: 325 mean_circ: 0.942641
Ran for 10050 frames Cell Events: 349 mean_circ: 0.942722
Ran for 10550 frames Cell Events: 368 mean_circ: 0.943384
Ran for 11050 frames Cell Events: 382 mean_circ: 0.943008
Ran for 11550 frames Cell Events: 397 mean_circ: 0.942423
Ran for 12050 frames Cell Events: 413 mean_circ: 0.942144
Ran for 12550 frames Cell Events: 431 mean_circ: 0.942733
Ran for 13050 frames Cell Events: 444 mean_circ: 0.942313
Ran for 14050 frames Cell Events: 482 mean_circ: 0.942575
Ran for 15050 frames Cell Events: 518 mean_circ: 0.942704
Ran for 15550 frames Cell Events: 526 mean_circ: 0.942832
Ran for 16050 frames Cell Events: 544 mean_circ: 0.9434
Ran for 16550 frames Cell Events: 562 mean_circ: 0.943428
Ran for 18050 frames Cell Events: 610 mean_circ: 0.942364
Ran for 19050 frames Cell Events: 643 mean_circ: 0.941896
Ran for 20050 frames Cell Events: 679 mean_circ: 0.941541
Ran for 20550 frames Cell Events: 691 mean_circ: 0.941339
Ran for 21550 frames Cell Events: 729 mean_circ: 0.941453
Ran for 23050 frames Cell Events: 780 mean_circ: 0.94161
Ran for 24050 frames Cell Events: 805 mean_circ: 0.942009
Ran for 25050 frames Cell Events: 852 mean_circ: 0.942528
Ran for 25550 frames Cell Events: 863 mean_circ: 0.942529
Ran for 26050 frames Cell Events: 877 mean_circ: 0.942535
Ran for 26550 frames Cell Events: 891 mean_circ: 0.942547
Ran for 27050 frames Cell Events: 910 mean_circ: 0.942483
Ran for 27550 frames Cell Events: 923 mean_circ: 0.942248
Ran for 28050 frames Cell Events: 944 mean_circ: 0.942317
Ran for 29550 frames Cell Events: 986 mean_circ: 0.942363
Ran for 30050 frames Cell Events: 1004 mean_circ: 0.942607
Ran for 30550 frames Cell Events: 1024 mean_circ: 0.942811
Ran for 31050 frames Cell Events: 1047 mean_circ: 0.942783
Ran for 31550 frames Cell Events: 1061 mean_circ: 0.942968
Ran for 32550 frames Cell Events: 1106 mean_circ: 0.942962
Ran for 33050 frames Cell Events: 1130 mean_circ: 0.943003
Ran for 34050 frames Cell Events: 1178 mean_circ: 0.943042
Ran for 34550 frames Cell Events: 1196 mean_circ: 0.942932
Ran for 35050 frames Cell Events: 1216 mean_circ: 0.942956
Ran for 35550 frames Cell Events: 1238 mean_circ: 0.943131
Ran for 36050 frames Cell Events: 1262 mean_circ: 0.943064
Ran for 37050 frames Cell Events: 1297 mean_circ: 0.943187
Ran for 38050 frames Cell Events: 1338 mean_circ: 0.94294
Ran for 38550 frames Cell Events: 1352 mean_circ: 0.942873
Ran for 39050 frames Cell Events: 1372 mean_circ: 0.943028
Ran for 39550 frames Cell Events: 1387 mean_circ: 0.94337
Ran for 40550 frames Cell Events: 1412 mean_circ: 0.943413
Ran for 41050 frames Cell Events: 1433 mean_circ: 0.943514
Ran for 41550 frames Cell Events: 1470 mean_circ: 0.943278
Ran for 42050 frames Cell Events: 1489 mean_circ: 0.943411
Ran for 42550 frames Cell Events: 1506 mean_circ: 0.943444
Ran for 43550 frames Cell Events: 1544 mean_circ: 0.943356
Ran for 45050 frames Cell Events: 1646 mean_circ: 0.94321
Ran for 45550 frames Cell Events: 1674 mean_circ: 0.943384
Ran for 46050 frames Cell Events: 1699 mean_circ: 0.943317
Ran for 47550 frames Cell Events: 1753 mean_circ: 0.943189
Ran for 48550 frames Cell Events: 1786 mean_circ: 0.943066
Ran for 49050 frames Cell Events: 1809 mean_circ: 0.94309
Ran for 49550 frames Cell Events: 1820 mean_circ: 0.942918
Ran for 50050 frames Cell Events: 1839 mean_circ: 0.942993
Ran for 50550 frames Cell Events: 1853 mean_circ: 0.943008
Ran for 51050 frames Cell Events: 1867 mean_circ: 0.943052
Ran for 52050 frames Cell Events: 1915 mean_circ: 0.943189
Ran for 53050 frames Cell Events: 1946 mean_circ: 0.943206
Ran for 54050 frames Cell Events: 1968 mean_circ: 0.943161
Ran for 54550 frames Cell Events: 1986 mean_circ: 0.943083
Ran for 57050 frames Cell Events: 2080 mean_circ: 0.943183
Ran for 58550 frames Cell Events: 2124 mean_circ: 0.943025
Ran for 59050 frames Cell Events: 2149 mean_circ: 0.943025
Ran for 59550 frames Cell Events: 2163 mean_circ: 0.943219
Ran for 60550 frames Cell Events: 2199 mean_circ: 0.943101
Ran for 61550 frames Cell Events: 2232 mean_circ: 0.942926
Ran for 62050 frames Cell Events: 2247 mean_circ: 0.942934
Ran for 62550 frames Cell Events: 2264 mean_circ: 0.942997
Ran for 63050 frames Cell Events: 2279 mean_circ: 0.943086
Ran for 63550 frames Cell Events: 2297 mean_circ: 0.94309
Ran for 64050 frames Cell Events: 2305 mean_circ: 0.943155
Ran for 64550 frames Cell Events: 2325 mean_circ: 0.943126
Ran for 65050 frames Cell Events: 2342 mean_circ: 0.942928
Ran for 65550 frames Cell Events: 2362 mean_circ: 0.943033
Ran for 66050 frames Cell Events: 2388 mean_circ: 0.94311
Ran for 66550 frames Cell Events: 2402 mean_circ: 0.943181
Ran for 67050 frames Cell Events: 2419 mean_circ: 0.943234
Ran for 67550 frames Cell Events: 2442 mean_circ: 0.943265
Ran for 69550 frames Cell Events: 2509 mean_circ: 0.943347
Ran for 71550 frames Cell Events: 2584 mean_circ: 0.943352
Ran for 72550 frames Cell Events: 2630 mean_circ: 0.943287
Ran for 73050 frames Cell Events: 2647 mean_circ: 0.943183
Ran for 73550 frames Cell Events: 2663 mean_circ: 0.943064
Ran for 74050 frames Cell Events: 2682 mean_circ: 0.94305
Ran for 75050 frames Cell Events: 2704 mean_circ: 0.94294
Ran for 75550 frames Cell Events: 2718 mean_circ: 0.942992
Ran for 76050 frames Cell Events: 2738 mean_circ: 0.943113
Ran for 76550 frames Cell Events: 2762 mean_circ: 0.943197
Ran for 77050 frames Cell Events: 2777 mean_circ: 0.943237
Ran for 77550 frames Cell Events: 2787 mean_circ: 0.943249
Ran for 78050 frames Cell Events: 2808 mean_circ: 0.943164
Ran for 79050 frames Cell Events: 2850 mean_circ: 0.943078
Ran for 79550 frames Cell Events: 2874 mean_circ: 0.943128
Ran for 80050 frames Cell Events: 2883 mean_circ: 0.943161
Ran for 80550 frames Cell Events: 2895 mean_circ: 0.943056
Ran for 84550 frames Cell Events: 3066 mean_circ: 0.942938
Ran for 85050 frames Cell Events: 3075 mean_circ: 0.94294
Ran for 85550 frames Cell Events: 3092 mean_circ: 0.942992
Ran for 86050 frames Cell Events: 3108 mean_circ: 0.943091
Ran for 86550 frames Cell Events: 3121 mean_circ: 0.943152
Ran for 87050 frames Cell Events: 3134 mean_circ: 0.943049
Ran for 88050 frames Cell Events: 3167 mean_circ: 0.943018
Ran for 88550 frames Cell Events: 3187 mean_circ: 0.943054
Ran for 89550 frames Cell Events: 3219 mean_circ: 0.943174
Ran for 90050 frames Cell Events: 3233 mean_circ: 0.943203
Ran for 90550 frames Cell Events: 3247 mean_circ: 0.943178
Ran for 91050 frames Cell Events: 3266 mean_circ: 0.943157
Ran for 91550 frames Cell Events: 3285 mean_circ: 0.943152
Ran for 92050 frames Cell Events: 3306 mean_circ: 0.943111
Ran for 92550 frames Cell Events: 3321 mean_circ: 0.943122
Ran for 93050 frames Cell Events: 3330 mean_circ: 0.943131
Ran for 93550 frames Cell Events: 3351 mean_circ: 0.943159
Ran for 95550 frames Cell Events: 3414 mean_circ: 0.943162
Ran for 96050 frames Cell Events: 3426 mean_circ: 0.943196
Ran for 96550 frames Cell Events: 3445 mean_circ: 0.943214
Ran for 98050 frames Cell Events: 3503 mean_circ: 0.943178
Ran for 98550 frames Cell Events: 3520 mean_circ: 0.943204
Ran for 99550 frames Cell Events: 3573 mean_circ: 0.943287
Ran for 100050 frames Cell Events: 3585 mean_circ: 0.943309
Ran for 100550 frames Cell Events: 3602 mean_circ: 0.943349
Ran for 101050 frames Cell Events: 3619 mean_circ: 0.943364
Ran for 102050 frames Cell Events: 3654 mean_circ: 0.943458
Ran for 103550 frames Cell Events: 3702 mean_circ: 0.943294
Ran for 104050 frames Cell Events: 3717 mean_circ: 0.943264
Ran for 104550 frames Cell Events: 3732 mean_circ: 0.943306
Ran for 105050 frames Cell Events: 3746 mean_circ: 0.943308
Ran for 105550 frames Cell Events: 3761 mean_circ: 0.943328
Ran for 106550 frames Cell Events: 3789 mean_circ: 0.943295
Ran for 107050 frames Cell Events: 3799 mean_circ: 0.943243
Ran for 107550 frames Cell Events: 3813 mean_circ: 0.943258
Ran for 109050 frames Cell Events: 3859 mean_circ: 0.943259
Ran for 109550 frames Cell Events: 3873 mean_circ: 0.943223
Ran for 110550 frames Cell Events: 3896 mean_circ: 0.943116
Ran for 111050 frames Cell Events: 3911 mean_circ: 0.943095
Ran for 111550 frames Cell Events: 3929 mean_circ: 0.943091
Ran for 112550 frames Cell Events: 3952 mean_circ: 0.943094
Ran for 113550 frames Cell Events: 3986 mean_circ: 0.943208
Ran for 114050 frames Cell Events: 3996 mean_circ: 0.943222
Ran for 114550 frames Cell Events: 4008 mean_circ: 0.943239
Ran for 115050 frames Cell Events: 4017 mean_circ: 0.943258
Ran for 116550 frames Cell Events: 4065 mean_circ: 0.943257
Ran for 117050 frames Cell Events: 4082 mean_circ: 0.943228
Ran for 117550 frames Cell Events: 4093 mean_circ: 0.943163
Ran for 118050 frames Cell Events: 4105 mean_circ: 0.943163
Ran for 118550 frames Cell Events: 4116 mean_circ: 0.943165
Ran for 119050 frames Cell Events: 4131 mean_circ: 0.94322
Ran for 119550 frames Cell Events: 4153 mean_circ: 0.943246
Ran for 120050 frames Cell Events: 4164 mean_circ: 0.94325
Ran for 121050 frames Cell Events: 4205 mean_circ: 0.943259
Ran for 121550 frames Cell Events: 4216 mean_circ: 0.943258
Ran for 122550 frames Cell Events: 4246 mean_circ: 0.94326
Ran for 123050 frames Cell Events: 4258 mean_circ: 0.943232
Ran for 123550 frames Cell Events: 4265 mean_circ: 0.943241
Ran for 124050 frames Cell Events: 4277 mean_circ: 0.943252
Ran for 125050 frames Cell Events: 4312 mean_circ: 0.943158
Ran for 127050 frames Cell Events: 4379 mean_circ: 0.943201
Ran for 128050 frames Cell Events: 4410 mean_circ: 0.943164
Ran for 128550 frames Cell Events: 4422 mean_circ: 0.943162
Ran for 129550 frames Cell Events: 4464 mean_circ: 0.943163
Ran for 130050 frames Cell Events: 4490 mean_circ: 0.943162
Ran for 130550 frames Cell Events: 4517 mean_circ: 0.943185
Ran for 132050 frames Cell Events: 4550 mean_circ: 0.943234
Ran for 133050 frames Cell Events: 4583 mean_circ: 0.943209
Ran for 133550 frames Cell Events: 4603 mean_circ: 0.943209
Ran for 136550 frames Cell Events: 4728 mean_circ: 0.943141
Ran for 138050 frames Cell Events: 4786 mean_circ: 0.943165
Ran for 139050 frames Cell Events: 4822 mean_circ: 0.943233
Ran for 140050 frames Cell Events: 4851 mean_circ: 0.94331
Ran for 140550 frames Cell Events: 4866 mean_circ: 0.943278
Ran for 141050 frames Cell Events: 4882 mean_circ: 0.943281
Ran for 141550 frames Cell Events: 4906 mean_circ: 0.943266
Ran for 142050 frames Cell Events: 4921 mean_circ: 0.943267
Ran for 142550 frames Cell Events: 4948 mean_circ: 0.943264
Ran for 144050 frames Cell Events: 5035 mean_circ: 0.943182
Ran for 145050 frames Cell Events: 5073 mean_circ: 0.943214
Ran for 146050 frames Cell Events: 5115 mean_circ: 0.943192
Ran for 146550 frames Cell Events: 5129 mean_circ: 0.943192
Ran for 147050 frames Cell Events: 5144 mean_circ: 0.943149
Ran for 147550 frames Cell Events: 5155 mean_circ: 0.943172
Ran for 148050 frames Cell Events: 5160 mean_circ: 0.943187
Ran for 149050 frames Cell Events: 5207 mean_circ: 0.943227
Ran for 149550 frames Cell Events: 5232 mean_circ: 0.94328
Ran for 151550 frames Cell Events: 5333 mean_circ: 0.943224
Ran for 152050 frames Cell Events: 5346 mean_circ: 0.9432
Ran for 152550 frames Cell Events: 5361 mean_circ: 0.943216
Ran for 153050 frames Cell Events: 5375 mean_circ: 0.943267
Ran for 153550 frames Cell Events: 5384 mean_circ: 0.943232
Ran for 154050 frames Cell Events: 5398 mean_circ: 0.943253
Ran for 154550 frames Cell Events: 5412 mean_circ: 0.943293
Ran for 155050 frames Cell Events: 5424 mean_circ: 0.94328
Ran for 157050 frames Cell Events: 5485 mean_circ: 0.943319
Ran for 157550 frames Cell Events: 5505 mean_circ: 0.94331
Ran for 158550 frames Cell Events: 5535 mean_circ: 0.943321
Ran for 159050 frames Cell Events: 5547 mean_circ: 0.943367
Ran for 160050 frames Cell Events: 5581 mean_circ: 0.943355
Ran for 160550 frames Cell Events: 5602 mean_circ: 0.943344
Ran for 161050 frames Cell Events: 5624 mean_circ: 0.943331
Ran for 162050 frames Cell Events: 5665 mean_circ: 0.943329
Ran for 163050 frames Cell Events: 5695 mean_circ: 0.943327
Ran for 163550 frames Cell Events: 5711 mean_circ: 0.943363
Ran for 164050 frames Cell Events: 5723 mean_circ: 0.943383
Ran for 164550 frames Cell Events: 5739 mean_circ: 0.943352
Ran for 166550 frames Cell Events: 5802 mean_circ: 0.943285
Ran for 167050 frames Cell Events: 5821 mean_circ: 0.943288
Ran for 167550 frames Cell Events: 5834 mean_circ: 0.943304
Ran for 168050 frames Cell Events: 5848 mean_circ: 0.943304
Ran for 168550 frames Cell Events: 5873 mean_circ: 0.943271
Ran for 169050 frames Cell Events: 5890 mean_circ: 0.943278
Ran for 169550 frames Cell Events: 5919 mean_circ: 0.943278
Ran for 170050 frames Cell Events: 5941 mean_circ: 0.943316
Ran for 172050 frames Cell Events: 6044 mean_circ: 0.943324
Ran for 173050 frames Cell Events: 6077 mean_circ: 0.943342
Ran for 173550 frames Cell Events: 6097 mean_circ: 0.943301
Ran for 175050 frames Cell Events: 6168 mean_circ: 0.943364
Ran for 175550 frames Cell Events: 6189 mean_circ: 0.943334
Ran for 176050 frames Cell Events: 6214 mean_circ: 0.943291
Ran for 176550 frames Cell Events: 6235 mean_circ: 0.94328
Ran for 177550 frames Cell Events: 6284 mean_circ: 0.943326
Ran for 178050 frames Cell Events: 6301 mean_circ: 0.943317
Ran for 178550 frames Cell Events: 6329 mean_circ: 0.943338
Ran for 179050 frames Cell Events: 6353 mean_circ: 0.943366
Ran for 180550 frames Cell Events: 6429 mean_circ: 0.94337
Ran for 181050 frames Cell Events: 6448 mean_circ: 0.94338
Ran for 181550 frames Cell Events: 6473 mean_circ: 0.943341
Ran for 182050 frames Cell Events: 6493 mean_circ: 0.943356
Ran for 182550 frames Cell Events: 6510 mean_circ: 0.94339
Ran for 183550 frames Cell Events: 6556 mean_circ: 0.943397
Ran for 184050 frames Cell Events: 6575 mean_circ: 0.943419
Ran for 184550 frames Cell Events: 6588 mean_circ: 0.943418
Ran for 185050 frames Cell Events: 6604 mean_circ: 0.943441
Ran for 186050 frames Cell Events: 6642 mean_circ: 0.943414
Ran for 186550 frames Cell Events: 6655 mean_circ: 0.943381
Ran for 187050 frames Cell Events: 6672 mean_circ: 0.943375
Ran for 187550 frames Cell Events: 6695 mean_circ: 0.94342
Ran for 189050 frames Cell Events: 6750 mean_circ: 0.943315
Ran for 189550 frames Cell Events: 6762 mean_circ: 0.943318
Ran for 190050 frames Cell Events: 6779 mean_circ: 0.943327
Ran for 190550 frames Cell Events: 6793 mean_circ: 0.943312
Ran for 191050 frames Cell Events: 6805 mean_circ: 0.943335
Ran for 192050 frames Cell Events: 6828 mean_circ: 0.943348
Ran for 192550 frames Cell Events: 6846 mean_circ: 0.943352
Ran for 193050 frames Cell Events: 6861 mean_circ: 0.943387
Ran for 193550 frames Cell Events: 6882 mean_circ: 0.943393
Ran for 194050 frames Cell Events: 6902 mean_circ: 0.943334
Ran for 194550 frames Cell Events: 6916 mean_circ: 0.943352
Ran for 195550 frames Cell Events: 6951 mean_circ: 0.943381
Ran for 196050 frames Cell Events: 6972 mean_circ: 0.943364
Ran for 197050 frames Cell Events: 7009 mean_circ: 0.943271
Ran for 198550 frames Cell Events: 7061 mean_circ: 0.943367
Ran for 199050 frames Cell Events: 7078 mean_circ: 0.943364
Ran for 200550 frames Cell Events: 7125 mean_circ: 0.94343
Ran for 201050 frames Cell Events: 7140 mean_circ: 0.943442
Ran for 201550 frames Cell Events: 7167 mean_circ: 0.943423
Ran for 202550 frames Cell Events: 7203 mean_circ: 0.943316
Ran for 203550 frames Cell Events: 7252 mean_circ: 0.943349
Ran for 204550 frames Cell Events: 7281 mean_circ: 0.943376
Ran for 206550 frames Cell Events: 7360 mean_circ: 0.943374
Ran for 207550 frames Cell Events: 7397 mean_circ: 0.94338
Ran for 208550 frames Cell Events: 7428 mean_circ: 0.943351
Ran for 209550 frames Cell Events: 7472 mean_circ: 0.943428
Ran for 210050 frames Cell Events: 7487 mean_circ: 0.94344
Ran for 210550 frames Cell Events: 7511 mean_circ: 0.943446
Ran for 211050 frames Cell Events: 7526 mean_circ: 0.943452
Ran for 212050 frames Cell Events: 7571 mean_circ: 0.943457
Ran for 212550 frames Cell Events: 7589 mean_circ: 0.943458
Ran for 213050 frames Cell Events: 7610 mean_circ: 0.943497
Ran for 213550 frames Cell Events: 7627 mean_circ: 0.943457
Ran for 214050 frames Cell Events: 7643 mean_circ: 0.94347
Ran for 214550 frames Cell Events: 7656 mean_circ: 0.943475
Ran for 215550 frames Cell Events: 7683 mean_circ: 0.943471
Ran for 216050 frames Cell Events: 7705 mean_circ: 0.94349
Ran for 217550 frames Cell Events: 7748 mean_circ: 0.943533
Ran for 218050 frames Cell Events: 7763 mean_circ: 0.943537
Ran for 219050 frames Cell Events: 7785 mean_circ: 0.943526
Ran for 219550 frames Cell Events: 7806 mean_circ: 0.943557
Ran for 220050 frames Cell Events: 7833 mean_circ: 0.943582
Ran for 220550 frames Cell Events: 7860 mean_circ: 0.943584
Ran for 221050 frames Cell Events: 7876 mean_circ: 0.9436
Ran for 222050 frames Cell Events: 7906 mean_circ: 0.943584
Ran for 222550 frames Cell Events: 7924 mean_circ: 0.943604
Ran for 223050 frames Cell Events: 7936 mean_circ: 0.9436
Ran for 223550 frames Cell Events: 7948 mean_circ: 0.943567
Ran for 225050 frames Cell Events: 8010 mean_circ: 0.943564
Ran for 225550 frames Cell Events: 8037 mean_circ: 0.943618
Ran for 226050 frames Cell Events: 8050 mean_circ: 0.943628
Ran for 226550 frames Cell Events: 8065 mean_circ: 0.943657
Ran for 227050 frames Cell Events: 8090 mean_circ: 0.943683
Ran for 227550 frames Cell Events: 8098 mean_circ: 0.943685
Ran for 228050 frames Cell Events: 8120 mean_circ: 0.943674
Ran for 228550 frames Cell Events: 8141 mean_circ: 0.943642
Ran for 229550 frames Cell Events: 8180 mean_circ: 0.943632
Ran for 231050 frames Cell Events: 8240 mean_circ: 0.943668
Ran for 231550 frames Cell Events: 8265 mean_circ: 0.943608
Ran for 232050 frames Cell Events: 8277 mean_circ: 0.94361
Ran for 232550 frames Cell Events: 8291 mean_circ: 0.943573
Ran for 233550 frames Cell Events: 8318 mean_circ: 0.943613
Ran for 234050 frames Cell Events: 8334 mean_circ: 0.943584
Ran for 235050 frames Cell Events: 8367 mean_circ: 0.943594
Ran for 235550 frames Cell Events: 8393 mean_circ: 0.943549
Ran for 236050 frames Cell Events: 8410 mean_circ: 0.943539
Ran for 241050 frames Cell Events: 8578 mean_circ: 0.943543
Ran for 241550 frames Cell Events: 8602 mean_circ: 0.943528
Ran for 242550 frames Cell Events: 8629 mean_circ: 0.943544
Ran for 243550 frames Cell Events: 8668 mean_circ: 0.943506
Ran for 245050 frames Cell Events: 8724 mean_circ: 0.943449
Ran for 245550 frames Cell Events: 8737 mean_circ: 0.943428
Ran for 246050 frames Cell Events: 8754 mean_circ: 0.943437
Ran for 246550 frames Cell Events: 8784 mean_circ: 0.943443
Ran for 247050 frames Cell Events: 8799 mean_circ: 0.943462
Ran for 247550 frames Cell Events: 8811 mean_circ: 0.943452
Ran for 248050 frames Cell Events: 8833 mean_circ: 0.943415
Ran for 248550 frames Cell Events: 8849 mean_circ: 0.943395
End this measurment..
Stopping time: 2.32092e+008
****************************************
Measurement finished
Mean Circularitiy: 0.943396
Mean Area: 619.37
Mean FL-1 intensity: 3041.9
Mean FL-2 intensity: 4072.33
Mean FL-3 intensity: 0
frames processed: 249216
Total Time: 124755ms
Number of Runs (new bg img) 0
Frames collected: 249380
Skipped frames: 70679
Rescued Frames: 5943271
Samples DAQ: 62344920
Samples written: 124689598
Samples per Channel: 62344799
FPS: 1998.95
Samples per second: 499737
Expected samples/s: 500000
Events: 8863
Events per second: 71.0431
jumped back (PMT): 6116
#Frames read, frequency
# 0 frames :350308
# 1 frames :129085
# 2 frames :6009
# 3 frames :1931
# 4 frames :1125
# 5 frames :447
# 6 frames :1246
# 7 frames :2474
# 8 frames :1112
# 9 frames :789
# 10 frames :1601
# 11 frames :601
# 12 frames :483
# 13 frames :300
# 14 frames :180
# 15 frames :217
# 16 frames :176
# 17 frames :131
# 18 frames :107
# 19 frames :65
# 20 frames :63
# 21 frames :47
# 22 frames :40
# 23 frames :34
# 24 frames :32
# 25 frames :16
# 26 frames :24
# 27 frames :12
# 28 frames :14
# 29 frames :12
# 30 frames :11
# 31 frames :1
# 32 frames :7
# 33 frames :7
# 34 frames :5
# 35 frames :3
# 36 frames :2
# 37 frames :2
# 38 frames :2
# 39 frames :2
# 40 frames :1
# 41 frames :2
# 42 frames :2
# 45 frames :2
# 46 frames :1
# 51 frames :1
# 52 frames :1
# 61 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6997
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0