Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_18.35.50
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "f5abda67f512185f6ac5ea3030181280",
"name": "M1_20170616_2035_set1_dsRNA_26b.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:36:15"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7546
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.35455e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.911184
Ran for 550 frames Cell Events: 11 mean_circ: 0.924845
Ran for 2050 frames Cell Events: 59 mean_circ: 0.94517
Ran for 3050 frames Cell Events: 95 mean_circ: 0.946608
Ran for 3550 frames Cell Events: 103 mean_circ: 0.945662
Ran for 4050 frames Cell Events: 116 mean_circ: 0.94669
Ran for 5050 frames Cell Events: 143 mean_circ: 0.944775
Ran for 5550 frames Cell Events: 154 mean_circ: 0.943912
Ran for 6050 frames Cell Events: 161 mean_circ: 0.942669
Ran for 6550 frames Cell Events: 177 mean_circ: 0.944179
Ran for 7050 frames Cell Events: 191 mean_circ: 0.944834
Ran for 8050 frames Cell Events: 226 mean_circ: 0.943834
Ran for 9050 frames Cell Events: 256 mean_circ: 0.942026
Ran for 10050 frames Cell Events: 273 mean_circ: 0.941712
Ran for 10550 frames Cell Events: 283 mean_circ: 0.941663
Ran for 11050 frames Cell Events: 297 mean_circ: 0.941866
Ran for 11550 frames Cell Events: 311 mean_circ: 0.942079
Ran for 12550 frames Cell Events: 353 mean_circ: 0.940798
Ran for 13050 frames Cell Events: 363 mean_circ: 0.939855
Ran for 13550 frames Cell Events: 367 mean_circ: 0.939848
Ran for 14050 frames Cell Events: 381 mean_circ: 0.93995
Ran for 15550 frames Cell Events: 421 mean_circ: 0.939902
Ran for 16050 frames Cell Events: 437 mean_circ: 0.939241
Ran for 17050 frames Cell Events: 467 mean_circ: 0.936825
Ran for 18050 frames Cell Events: 501 mean_circ: 0.936928
Ran for 18550 frames Cell Events: 520 mean_circ: 0.937025
Ran for 19050 frames Cell Events: 538 mean_circ: 0.936284
Ran for 21050 frames Cell Events: 581 mean_circ: 0.935928
Ran for 23050 frames Cell Events: 651 mean_circ: 0.935189
Ran for 23550 frames Cell Events: 666 mean_circ: 0.934651
Ran for 24050 frames Cell Events: 681 mean_circ: 0.93486
Ran for 24550 frames Cell Events: 695 mean_circ: 0.934599
Ran for 25050 frames Cell Events: 708 mean_circ: 0.934636
Ran for 26550 frames Cell Events: 747 mean_circ: 0.934039
Ran for 27050 frames Cell Events: 753 mean_circ: 0.93413
Ran for 28550 frames Cell Events: 800 mean_circ: 0.934632
Ran for 29050 frames Cell Events: 809 mean_circ: 0.93464
Ran for 29550 frames Cell Events: 828 mean_circ: 0.934552
Ran for 30050 frames Cell Events: 842 mean_circ: 0.935008
Ran for 31050 frames Cell Events: 862 mean_circ: 0.935094
Ran for 31550 frames Cell Events: 874 mean_circ: 0.934925
Ran for 32050 frames Cell Events: 887 mean_circ: 0.935009
Ran for 32550 frames Cell Events: 893 mean_circ: 0.935135
Ran for 33050 frames Cell Events: 898 mean_circ: 0.935147
Ran for 33550 frames Cell Events: 916 mean_circ: 0.935141
Ran for 35550 frames Cell Events: 961 mean_circ: 0.934874
Ran for 36050 frames Cell Events: 972 mean_circ: 0.934983
Ran for 37050 frames Cell Events: 997 mean_circ: 0.934789
Ran for 37550 frames Cell Events: 1008 mean_circ: 0.934843
Ran for 38050 frames Cell Events: 1020 mean_circ: 0.934879
Ran for 39550 frames Cell Events: 1064 mean_circ: 0.935042
Ran for 40050 frames Cell Events: 1075 mean_circ: 0.935019
Ran for 40550 frames Cell Events: 1088 mean_circ: 0.934947
Ran for 41050 frames Cell Events: 1093 mean_circ: 0.934837
Ran for 42050 frames Cell Events: 1118 mean_circ: 0.934825
Ran for 42550 frames Cell Events: 1137 mean_circ: 0.934785
Ran for 43050 frames Cell Events: 1150 mean_circ: 0.934341
Ran for 43550 frames Cell Events: 1163 mean_circ: 0.934281
Ran for 44050 frames Cell Events: 1170 mean_circ: 0.934351
Ran for 44550 frames Cell Events: 1183 mean_circ: 0.934098
Ran for 45050 frames Cell Events: 1199 mean_circ: 0.93415
Ran for 46550 frames Cell Events: 1240 mean_circ: 0.933963
Ran for 47050 frames Cell Events: 1259 mean_circ: 0.93401
Ran for 48550 frames Cell Events: 1304 mean_circ: 0.933666
Ran for 49050 frames Cell Events: 1327 mean_circ: 0.933642
Ran for 49550 frames Cell Events: 1340 mean_circ: 0.933749
Ran for 50050 frames Cell Events: 1348 mean_circ: 0.933713
Ran for 51050 frames Cell Events: 1379 mean_circ: 0.933833
Ran for 52550 frames Cell Events: 1427 mean_circ: 0.933832
Ran for 53050 frames Cell Events: 1442 mean_circ: 0.933929
Ran for 53550 frames Cell Events: 1458 mean_circ: 0.934011
Ran for 54050 frames Cell Events: 1465 mean_circ: 0.933804
Ran for 54550 frames Cell Events: 1480 mean_circ: 0.93384
Ran for 55050 frames Cell Events: 1490 mean_circ: 0.93372
Ran for 55550 frames Cell Events: 1508 mean_circ: 0.933791
Ran for 56550 frames Cell Events: 1535 mean_circ: 0.933759
Ran for 57550 frames Cell Events: 1575 mean_circ: 0.933882
Ran for 58050 frames Cell Events: 1588 mean_circ: 0.933829
Ran for 59050 frames Cell Events: 1630 mean_circ: 0.93366
Ran for 60550 frames Cell Events: 1685 mean_circ: 0.933512
Ran for 61050 frames Cell Events: 1697 mean_circ: 0.933456
Ran for 61550 frames Cell Events: 1715 mean_circ: 0.933509
Ran for 62050 frames Cell Events: 1731 mean_circ: 0.933545
Ran for 62550 frames Cell Events: 1748 mean_circ: 0.93338
Ran for 63050 frames Cell Events: 1777 mean_circ: 0.933468
Ran for 63550 frames Cell Events: 1793 mean_circ: 0.933414
Ran for 64050 frames Cell Events: 1807 mean_circ: 0.933399
Ran for 64550 frames Cell Events: 1820 mean_circ: 0.933492
Ran for 65550 frames Cell Events: 1849 mean_circ: 0.9334
Ran for 66550 frames Cell Events: 1867 mean_circ: 0.933217
Ran for 67050 frames Cell Events: 1882 mean_circ: 0.933358
Ran for 67550 frames Cell Events: 1890 mean_circ: 0.933351
Ran for 68550 frames Cell Events: 1922 mean_circ: 0.933534
Ran for 69550 frames Cell Events: 1959 mean_circ: 0.933618
Ran for 71050 frames Cell Events: 2018 mean_circ: 0.933849
Ran for 72550 frames Cell Events: 2081 mean_circ: 0.93409
Ran for 73050 frames Cell Events: 2103 mean_circ: 0.934102
Ran for 74050 frames Cell Events: 2158 mean_circ: 0.934216
Ran for 74550 frames Cell Events: 2176 mean_circ: 0.93419
Ran for 75050 frames Cell Events: 2192 mean_circ: 0.934208
Ran for 77050 frames Cell Events: 2275 mean_circ: 0.934329
Ran for 77550 frames Cell Events: 2284 mean_circ: 0.934342
Ran for 78050 frames Cell Events: 2301 mean_circ: 0.934306
Ran for 79050 frames Cell Events: 2332 mean_circ: 0.93441
Ran for 79550 frames Cell Events: 2356 mean_circ: 0.934484
Ran for 80050 frames Cell Events: 2371 mean_circ: 0.934272
Ran for 81050 frames Cell Events: 2395 mean_circ: 0.934428
Ran for 83050 frames Cell Events: 2469 mean_circ: 0.934246
Ran for 84050 frames Cell Events: 2496 mean_circ: 0.934245
Ran for 85050 frames Cell Events: 2523 mean_circ: 0.934242
Ran for 85550 frames Cell Events: 2535 mean_circ: 0.934182
Ran for 86050 frames Cell Events: 2556 mean_circ: 0.93409
Ran for 86550 frames Cell Events: 2567 mean_circ: 0.934145
Ran for 87050 frames Cell Events: 2585 mean_circ: 0.934172
Ran for 88050 frames Cell Events: 2624 mean_circ: 0.934041
Ran for 88550 frames Cell Events: 2640 mean_circ: 0.933974
Ran for 89050 frames Cell Events: 2660 mean_circ: 0.934
Ran for 89550 frames Cell Events: 2681 mean_circ: 0.933878
Ran for 90050 frames Cell Events: 2692 mean_circ: 0.933972
Ran for 90550 frames Cell Events: 2714 mean_circ: 0.933902
Ran for 91550 frames Cell Events: 2754 mean_circ: 0.93405
Ran for 92050 frames Cell Events: 2773 mean_circ: 0.933997
Ran for 93050 frames Cell Events: 2812 mean_circ: 0.934036
Ran for 94050 frames Cell Events: 2853 mean_circ: 0.933755
Ran for 95050 frames Cell Events: 2900 mean_circ: 0.933634
Ran for 95550 frames Cell Events: 2915 mean_circ: 0.933689
Ran for 96050 frames Cell Events: 2929 mean_circ: 0.933509
Ran for 96550 frames Cell Events: 2943 mean_circ: 0.933511
Ran for 97050 frames Cell Events: 2954 mean_circ: 0.933445
Ran for 97550 frames Cell Events: 2969 mean_circ: 0.93338
Ran for 98050 frames Cell Events: 2987 mean_circ: 0.933474
Ran for 101050 frames Cell Events: 3079 mean_circ: 0.933518
Ran for 101550 frames Cell Events: 3098 mean_circ: 0.933496
Ran for 103550 frames Cell Events: 3184 mean_circ: 0.933423
Ran for 105550 frames Cell Events: 3250 mean_circ: 0.9332
Ran for 106050 frames Cell Events: 3265 mean_circ: 0.933219
Ran for 106550 frames Cell Events: 3286 mean_circ: 0.93309
Ran for 107050 frames Cell Events: 3298 mean_circ: 0.933141
Ran for 107550 frames Cell Events: 3314 mean_circ: 0.933066
Ran for 108050 frames Cell Events: 3327 mean_circ: 0.933032
Ran for 109050 frames Cell Events: 3364 mean_circ: 0.932972
Ran for 111550 frames Cell Events: 3466 mean_circ: 0.932989
Ran for 112550 frames Cell Events: 3506 mean_circ: 0.933028
Ran for 113050 frames Cell Events: 3517 mean_circ: 0.932964
Ran for 113550 frames Cell Events: 3526 mean_circ: 0.932979
Ran for 114050 frames Cell Events: 3545 mean_circ: 0.93305
Ran for 115050 frames Cell Events: 3587 mean_circ: 0.932952
Ran for 115550 frames Cell Events: 3608 mean_circ: 0.932981
Ran for 116550 frames Cell Events: 3647 mean_circ: 0.932902
Ran for 117050 frames Cell Events: 3657 mean_circ: 0.932922
Ran for 118050 frames Cell Events: 3693 mean_circ: 0.932936
Ran for 119050 frames Cell Events: 3722 mean_circ: 0.932885
Ran for 121050 frames Cell Events: 3782 mean_circ: 0.93302
Ran for 121550 frames Cell Events: 3797 mean_circ: 0.933002
Ran for 122050 frames Cell Events: 3811 mean_circ: 0.933039
Ran for 122550 frames Cell Events: 3828 mean_circ: 0.933173
Ran for 123050 frames Cell Events: 3847 mean_circ: 0.933163
Ran for 123550 frames Cell Events: 3863 mean_circ: 0.933156
Ran for 124050 frames Cell Events: 3880 mean_circ: 0.933089
Ran for 124550 frames Cell Events: 3904 mean_circ: 0.933141
Ran for 125050 frames Cell Events: 3919 mean_circ: 0.933121
Ran for 126050 frames Cell Events: 3952 mean_circ: 0.93316
Ran for 127050 frames Cell Events: 3979 mean_circ: 0.933226
Ran for 128050 frames Cell Events: 4021 mean_circ: 0.933313
Ran for 130550 frames Cell Events: 4147 mean_circ: 0.933251
Ran for 131050 frames Cell Events: 4170 mean_circ: 0.933229
Ran for 133550 frames Cell Events: 4263 mean_circ: 0.933194
Ran for 134050 frames Cell Events: 4281 mean_circ: 0.933184
Ran for 135050 frames Cell Events: 4323 mean_circ: 0.933061
Ran for 136550 frames Cell Events: 4384 mean_circ: 0.933048
Ran for 137550 frames Cell Events: 4427 mean_circ: 0.932989
Ran for 138050 frames Cell Events: 4451 mean_circ: 0.932973
Ran for 139050 frames Cell Events: 4485 mean_circ: 0.93298
Ran for 139550 frames Cell Events: 4502 mean_circ: 0.933001
Ran for 140050 frames Cell Events: 4516 mean_circ: 0.932961
Ran for 140550 frames Cell Events: 4531 mean_circ: 0.932944
Ran for 142050 frames Cell Events: 4589 mean_circ: 0.933103
Ran for 143050 frames Cell Events: 4616 mean_circ: 0.933151
Ran for 143550 frames Cell Events: 4632 mean_circ: 0.933225
Ran for 144050 frames Cell Events: 4657 mean_circ: 0.933225
Ran for 144550 frames Cell Events: 4685 mean_circ: 0.932911
Ran for 145050 frames Cell Events: 4702 mean_circ: 0.932944
Ran for 145550 frames Cell Events: 4719 mean_circ: 0.932864
Ran for 146550 frames Cell Events: 4753 mean_circ: 0.932848
Ran for 148050 frames Cell Events: 4815 mean_circ: 0.93286
Ran for 148550 frames Cell Events: 4837 mean_circ: 0.93286
Ran for 149050 frames Cell Events: 4853 mean_circ: 0.932842
Ran for 150050 frames Cell Events: 4897 mean_circ: 0.932725
Ran for 150550 frames Cell Events: 4917 mean_circ: 0.932795
Ran for 151050 frames Cell Events: 4939 mean_circ: 0.932732
Ran for 151550 frames Cell Events: 4949 mean_circ: 0.932667
Ran for 152550 frames Cell Events: 4991 mean_circ: 0.932704
Ran for 153550 frames Cell Events: 5028 mean_circ: 0.932633
Ran for 154050 frames Cell Events: 5045 mean_circ: 0.932628
Ran for 154550 frames Cell Events: 5066 mean_circ: 0.932565
Ran for 155050 frames Cell Events: 5086 mean_circ: 0.932535
Ran for 155550 frames Cell Events: 5108 mean_circ: 0.932555
Ran for 156050 frames Cell Events: 5132 mean_circ: 0.932584
Ran for 156550 frames Cell Events: 5144 mean_circ: 0.932601
Ran for 157050 frames Cell Events: 5160 mean_circ: 0.932605
Ran for 158050 frames Cell Events: 5217 mean_circ: 0.932586
Ran for 159050 frames Cell Events: 5275 mean_circ: 0.932558
Ran for 159550 frames Cell Events: 5286 mean_circ: 0.93259
Ran for 160550 frames Cell Events: 5326 mean_circ: 0.932558
Ran for 161550 frames Cell Events: 5375 mean_circ: 0.932524
Ran for 162050 frames Cell Events: 5391 mean_circ: 0.932468
Ran for 163050 frames Cell Events: 5422 mean_circ: 0.93245
Ran for 163550 frames Cell Events: 5436 mean_circ: 0.932401
Ran for 167050 frames Cell Events: 5586 mean_circ: 0.932336
Ran for 167550 frames Cell Events: 5614 mean_circ: 0.932392
Ran for 168050 frames Cell Events: 5629 mean_circ: 0.932327
Ran for 169050 frames Cell Events: 5665 mean_circ: 0.93221
Ran for 169550 frames Cell Events: 5676 mean_circ: 0.932247
Ran for 170550 frames Cell Events: 5707 mean_circ: 0.932249
Ran for 171050 frames Cell Events: 5721 mean_circ: 0.932217
Ran for 172550 frames Cell Events: 5766 mean_circ: 0.932237
Ran for 173050 frames Cell Events: 5791 mean_circ: 0.932243
Ran for 173550 frames Cell Events: 5808 mean_circ: 0.932259
Ran for 174050 frames Cell Events: 5821 mean_circ: 0.932327
Ran for 174550 frames Cell Events: 5831 mean_circ: 0.932329
Ran for 175050 frames Cell Events: 5857 mean_circ: 0.932294
Ran for 176550 frames Cell Events: 5901 mean_circ: 0.932215
Ran for 177550 frames Cell Events: 5945 mean_circ: 0.932292
Ran for 178050 frames Cell Events: 5959 mean_circ: 0.932326
Ran for 179050 frames Cell Events: 5989 mean_circ: 0.932333
Ran for 180050 frames Cell Events: 6020 mean_circ: 0.932398
Ran for 180550 frames Cell Events: 6032 mean_circ: 0.932405
Ran for 181550 frames Cell Events: 6063 mean_circ: 0.932451
Ran for 183050 frames Cell Events: 6128 mean_circ: 0.932332
Ran for 184050 frames Cell Events: 6165 mean_circ: 0.932361
Ran for 184550 frames Cell Events: 6178 mean_circ: 0.932353
Ran for 185550 frames Cell Events: 6224 mean_circ: 0.932365
Ran for 186050 frames Cell Events: 6251 mean_circ: 0.932443
Ran for 186550 frames Cell Events: 6265 mean_circ: 0.932407
Ran for 189550 frames Cell Events: 6443 mean_circ: 0.932384
Ran for 190050 frames Cell Events: 6464 mean_circ: 0.932334
Ran for 190550 frames Cell Events: 6495 mean_circ: 0.93224
Ran for 191050 frames Cell Events: 6515 mean_circ: 0.932194
Ran for 191550 frames Cell Events: 6530 mean_circ: 0.932177
Ran for 192050 frames Cell Events: 6551 mean_circ: 0.932232
Ran for 193550 frames Cell Events: 6614 mean_circ: 0.932171
Ran for 195550 frames Cell Events: 6726 mean_circ: 0.932246
Ran for 196050 frames Cell Events: 6761 mean_circ: 0.932082
Ran for 197050 frames Cell Events: 6820 mean_circ: 0.932147
Ran for 198050 frames Cell Events: 6886 mean_circ: 0.93213
Ran for 198550 frames Cell Events: 6910 mean_circ: 0.932122
Ran for 199050 frames Cell Events: 6927 mean_circ: 0.932102
Ran for 200050 frames Cell Events: 6966 mean_circ: 0.932192
Ran for 201550 frames Cell Events: 7018 mean_circ: 0.932193
Ran for 202050 frames Cell Events: 7034 mean_circ: 0.932192
Ran for 202550 frames Cell Events: 7053 mean_circ: 0.932183
Ran for 203050 frames Cell Events: 7065 mean_circ: 0.932204
Ran for 204550 frames Cell Events: 7141 mean_circ: 0.932248
Ran for 205050 frames Cell Events: 7157 mean_circ: 0.932221
Ran for 205550 frames Cell Events: 7173 mean_circ: 0.932268
Ran for 206050 frames Cell Events: 7193 mean_circ: 0.932286
Ran for 206550 frames Cell Events: 7208 mean_circ: 0.932298
Ran for 207550 frames Cell Events: 7247 mean_circ: 0.93225
Ran for 208050 frames Cell Events: 7268 mean_circ: 0.93225
Ran for 210550 frames Cell Events: 7371 mean_circ: 0.932278
Ran for 212050 frames Cell Events: 7433 mean_circ: 0.932277
Ran for 212550 frames Cell Events: 7458 mean_circ: 0.932289
Ran for 214550 frames Cell Events: 7547 mean_circ: 0.932246
Ran for 215050 frames Cell Events: 7567 mean_circ: 0.932206
Ran for 216550 frames Cell Events: 7629 mean_circ: 0.932218
Ran for 217050 frames Cell Events: 7653 mean_circ: 0.932178
Ran for 218550 frames Cell Events: 7722 mean_circ: 0.932133
Ran for 220050 frames Cell Events: 7798 mean_circ: 0.932184
Ran for 220550 frames Cell Events: 7827 mean_circ: 0.932152
Ran for 222550 frames Cell Events: 7912 mean_circ: 0.932
Ran for 223550 frames Cell Events: 7957 mean_circ: 0.932008
Ran for 224050 frames Cell Events: 7977 mean_circ: 0.931987
Ran for 225050 frames Cell Events: 8028 mean_circ: 0.931977
Ran for 225550 frames Cell Events: 8046 mean_circ: 0.93202
Ran for 226550 frames Cell Events: 8102 mean_circ: 0.932062
Ran for 227550 frames Cell Events: 8163 mean_circ: 0.93208
Ran for 228050 frames Cell Events: 8187 mean_circ: 0.932068
Ran for 229050 frames Cell Events: 8227 mean_circ: 0.932051
Ran for 229550 frames Cell Events: 8245 mean_circ: 0.932065
Ran for 230050 frames Cell Events: 8270 mean_circ: 0.932102
Ran for 232050 frames Cell Events: 8360 mean_circ: 0.932068
Ran for 232550 frames Cell Events: 8398 mean_circ: 0.932067
Ran for 234050 frames Cell Events: 8489 mean_circ: 0.932091
Ran for 234550 frames Cell Events: 8510 mean_circ: 0.932124
Ran for 235050 frames Cell Events: 8536 mean_circ: 0.932129
Ran for 236050 frames Cell Events: 8582 mean_circ: 0.932142
Ran for 236550 frames Cell Events: 8596 mean_circ: 0.932154
Ran for 237550 frames Cell Events: 8643 mean_circ: 0.932149
Ran for 238550 frames Cell Events: 8690 mean_circ: 0.93214
Ran for 239550 frames Cell Events: 8743 mean_circ: 0.932186
Ran for 240050 frames Cell Events: 8765 mean_circ: 0.932174
Ran for 240550 frames Cell Events: 8790 mean_circ: 0.932197
Ran for 241550 frames Cell Events: 8831 mean_circ: 0.932181
Ran for 242050 frames Cell Events: 8853 mean_circ: 0.932182
Ran for 242550 frames Cell Events: 8867 mean_circ: 0.932175
Ran for 243550 frames Cell Events: 8902 mean_circ: 0.932204
Ran for 244050 frames Cell Events: 8926 mean_circ: 0.932171
Ran for 245050 frames Cell Events: 8971 mean_circ: 0.932198
Ran for 246550 frames Cell Events: 9056 mean_circ: 0.932201
Ran for 247050 frames Cell Events: 9083 mean_circ: 0.932152
Ran for 249050 frames Cell Events: 9185 mean_circ: 0.932061
Ran for 250050 frames Cell Events: 9231 mean_circ: 0.932066
Ran for 250550 frames Cell Events: 9251 mean_circ: 0.932059
Ran for 253550 frames Cell Events: 9403 mean_circ: 0.931928
Ran for 254550 frames Cell Events: 9447 mean_circ: 0.931972
Ran for 255050 frames Cell Events: 9468 mean_circ: 0.931943
Ran for 255550 frames Cell Events: 9486 mean_circ: 0.93194
Ran for 256050 frames Cell Events: 9508 mean_circ: 0.931947
Ran for 256550 frames Cell Events: 9532 mean_circ: 0.931958
Ran for 257050 frames Cell Events: 9550 mean_circ: 0.931967
Ran for 257550 frames Cell Events: 9573 mean_circ: 0.931982
Ran for 258550 frames Cell Events: 9620 mean_circ: 0.932019
Ran for 262050 frames Cell Events: 9767 mean_circ: 0.931886
Ran for 263050 frames Cell Events: 9807 mean_circ: 0.931889
Ran for 264050 frames Cell Events: 9837 mean_circ: 0.931866
Ran for 266050 frames Cell Events: 9930 mean_circ: 0.931881
Ran for 267050 frames Cell Events: 9959 mean_circ: 0.931889
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 2.35589e+008
****************************************
Measurement finished
Mean Circularitiy: 0.93188
Mean Area: 822.381
Mean FL-1 intensity: 10308.5
Mean FL-2 intensity: 12112.7
Mean FL-3 intensity: 0
frames processed: 266866
Total Time: 134075ms
Number of Runs (new bg img) 0
Frames collected: 267976
Skipped frames: 90600
Rescued Frames: 6911916
Samples DAQ: 66996143
Samples written: 133987714
Samples per Channel: 66993857
FPS: 1998.7
Samples per second: 499675
Expected samples/s: 500000
Events: 10002
Events per second: 74.6001
jumped back (PMT): 5261
#Frames read, frequency
# 0 frames :394679
# 1 frames :120997
# 2 frames :5101
# 3 frames :2201
# 4 frames :1110
# 5 frames :793
# 6 frames :655
# 7 frames :2673
# 8 frames :1276
# 9 frames :1070
# 10 frames :1083
# 11 frames :1028
# 12 frames :645
# 13 frames :396
# 14 frames :228
# 15 frames :277
# 16 frames :223
# 17 frames :240
# 18 frames :215
# 19 frames :165
# 20 frames :141
# 21 frames :102
# 22 frames :91
# 23 frames :72
# 24 frames :65
# 25 frames :56
# 26 frames :39
# 27 frames :29
# 28 frames :33
# 29 frames :27
# 30 frames :23
# 31 frames :21
# 32 frames :14
# 33 frames :12
# 34 frames :14
# 35 frames :8
# 36 frames :10
# 37 frames :10
# 38 frames :10
# 39 frames :6
# 40 frames :8
# 41 frames :3
# 42 frames :7
# 43 frames :4
# 44 frames :5
# 45 frames :2
# 46 frames :6
# 47 frames :1
# 48 frames :3
# 49 frames :1
# 50 frames :1
# 51 frames :2
# 52 frames :2
# 54 frames :2
# 55 frames :1
# 56 frames :2
# 57 frames :3
# 58 frames :1
# 59 frames :1
# 60 frames :1
# 62 frames :1
# 69 frames :1
# 71 frames :1
# 79 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7546
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0