Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_18.46.56
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "cbee6d2602ef21ff5ce3c44c7e3184b8",
"name": "M1_20170618_1532_dsRNA_Q8_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:47:17"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8034 (max 8035) in '8034'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8922
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 3.90089e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 6 mean_circ: 0.951754
Ran for 1050 frames Cell Events: 28 mean_circ: 0.938375
Ran for 1550 frames Cell Events: 45 mean_circ: 0.938746
Ran for 2050 frames Cell Events: 57 mean_circ: 0.939322
Ran for 2550 frames Cell Events: 69 mean_circ: 0.937595
Ran for 3050 frames Cell Events: 86 mean_circ: 0.939805
Ran for 3550 frames Cell Events: 106 mean_circ: 0.937673
Ran for 4050 frames Cell Events: 126 mean_circ: 0.939508
Ran for 4550 frames Cell Events: 139 mean_circ: 0.940583
Ran for 5550 frames Cell Events: 171 mean_circ: 0.93934
Ran for 6050 frames Cell Events: 193 mean_circ: 0.940525
Ran for 6550 frames Cell Events: 212 mean_circ: 0.940517
Ran for 7050 frames Cell Events: 232 mean_circ: 0.939755
Ran for 7550 frames Cell Events: 252 mean_circ: 0.938782
Ran for 8550 frames Cell Events: 284 mean_circ: 0.938715
Ran for 9050 frames Cell Events: 310 mean_circ: 0.940164
Ran for 9550 frames Cell Events: 332 mean_circ: 0.940114
Ran for 10050 frames Cell Events: 341 mean_circ: 0.940082
Ran for 10550 frames Cell Events: 354 mean_circ: 0.940344
Ran for 11550 frames Cell Events: 390 mean_circ: 0.941151
Ran for 12050 frames Cell Events: 412 mean_circ: 0.940416
Ran for 12550 frames Cell Events: 428 mean_circ: 0.939912
Ran for 13050 frames Cell Events: 451 mean_circ: 0.940322
Ran for 13550 frames Cell Events: 461 mean_circ: 0.940745
Ran for 14050 frames Cell Events: 475 mean_circ: 0.940951
Ran for 14550 frames Cell Events: 495 mean_circ: 0.940462
Ran for 15550 frames Cell Events: 526 mean_circ: 0.94059
Ran for 16050 frames Cell Events: 543 mean_circ: 0.9407
Ran for 16550 frames Cell Events: 564 mean_circ: 0.940763
Ran for 17550 frames Cell Events: 610 mean_circ: 0.940729
Ran for 18050 frames Cell Events: 632 mean_circ: 0.940918
Ran for 18550 frames Cell Events: 646 mean_circ: 0.940646
Ran for 19050 frames Cell Events: 656 mean_circ: 0.940598
Ran for 19550 frames Cell Events: 669 mean_circ: 0.940628
Ran for 20050 frames Cell Events: 682 mean_circ: 0.940592
Ran for 20550 frames Cell Events: 697 mean_circ: 0.940757
Ran for 21050 frames Cell Events: 710 mean_circ: 0.940668
Ran for 22050 frames Cell Events: 743 mean_circ: 0.940494
Ran for 22550 frames Cell Events: 756 mean_circ: 0.94056
Ran for 23050 frames Cell Events: 766 mean_circ: 0.940648
Ran for 24550 frames Cell Events: 810 mean_circ: 0.94031
Ran for 25050 frames Cell Events: 828 mean_circ: 0.940644
Ran for 25550 frames Cell Events: 841 mean_circ: 0.940812
Ran for 26050 frames Cell Events: 860 mean_circ: 0.94055
Ran for 26550 frames Cell Events: 875 mean_circ: 0.940729
Ran for 27550 frames Cell Events: 913 mean_circ: 0.940623
Ran for 28050 frames Cell Events: 935 mean_circ: 0.940504
Ran for 28550 frames Cell Events: 952 mean_circ: 0.940528
Ran for 29550 frames Cell Events: 988 mean_circ: 0.940615
Ran for 31050 frames Cell Events: 1030 mean_circ: 0.941021
Ran for 31550 frames Cell Events: 1052 mean_circ: 0.941184
Ran for 33050 frames Cell Events: 1120 mean_circ: 0.941229
Ran for 33550 frames Cell Events: 1136 mean_circ: 0.941077
Ran for 36050 frames Cell Events: 1232 mean_circ: 0.940968
Ran for 37050 frames Cell Events: 1258 mean_circ: 0.941035
Ran for 37550 frames Cell Events: 1270 mean_circ: 0.94091
Ran for 39050 frames Cell Events: 1310 mean_circ: 0.940696
Ran for 39550 frames Cell Events: 1318 mean_circ: 0.94067
Ran for 40550 frames Cell Events: 1359 mean_circ: 0.940726
Ran for 41050 frames Cell Events: 1375 mean_circ: 0.940813
Ran for 41550 frames Cell Events: 1387 mean_circ: 0.940791
Ran for 43050 frames Cell Events: 1429 mean_circ: 0.940684
Ran for 43550 frames Cell Events: 1439 mean_circ: 0.940785
Ran for 44050 frames Cell Events: 1457 mean_circ: 0.940805
Ran for 44550 frames Cell Events: 1472 mean_circ: 0.940853
Ran for 45050 frames Cell Events: 1482 mean_circ: 0.940994
Ran for 45550 frames Cell Events: 1492 mean_circ: 0.941008
Ran for 46050 frames Cell Events: 1512 mean_circ: 0.941155
Ran for 46550 frames Cell Events: 1527 mean_circ: 0.941169
Ran for 47050 frames Cell Events: 1541 mean_circ: 0.940998
Ran for 47550 frames Cell Events: 1549 mean_circ: 0.941023
Ran for 48050 frames Cell Events: 1564 mean_circ: 0.941098
Ran for 48550 frames Cell Events: 1580 mean_circ: 0.941038
Ran for 49050 frames Cell Events: 1599 mean_circ: 0.941118
Ran for 50050 frames Cell Events: 1638 mean_circ: 0.940854
Ran for 50550 frames Cell Events: 1658 mean_circ: 0.94076
Ran for 51550 frames Cell Events: 1689 mean_circ: 0.940749
Ran for 52550 frames Cell Events: 1717 mean_circ: 0.940817
Ran for 53050 frames Cell Events: 1733 mean_circ: 0.940948
Ran for 53550 frames Cell Events: 1750 mean_circ: 0.940871
Ran for 54050 frames Cell Events: 1762 mean_circ: 0.940937
Ran for 54550 frames Cell Events: 1781 mean_circ: 0.940938
Ran for 55050 frames Cell Events: 1795 mean_circ: 0.940898
Ran for 56050 frames Cell Events: 1827 mean_circ: 0.940865
Ran for 56550 frames Cell Events: 1833 mean_circ: 0.940907
Ran for 57050 frames Cell Events: 1845 mean_circ: 0.940759
Ran for 57550 frames Cell Events: 1866 mean_circ: 0.940617
Ran for 58050 frames Cell Events: 1884 mean_circ: 0.940711
Ran for 58550 frames Cell Events: 1896 mean_circ: 0.940671
Ran for 59050 frames Cell Events: 1908 mean_circ: 0.940628
Ran for 59550 frames Cell Events: 1929 mean_circ: 0.940639
Ran for 60550 frames Cell Events: 1969 mean_circ: 0.940604
Ran for 61050 frames Cell Events: 1988 mean_circ: 0.940603
Ran for 61550 frames Cell Events: 2000 mean_circ: 0.940593
Ran for 62050 frames Cell Events: 2018 mean_circ: 0.940664
Ran for 62550 frames Cell Events: 2030 mean_circ: 0.940543
Ran for 64050 frames Cell Events: 2083 mean_circ: 0.940234
Ran for 64550 frames Cell Events: 2097 mean_circ: 0.940117
Ran for 65050 frames Cell Events: 2104 mean_circ: 0.940122
Ran for 65550 frames Cell Events: 2121 mean_circ: 0.940138
Ran for 66050 frames Cell Events: 2135 mean_circ: 0.940122
Ran for 66550 frames Cell Events: 2148 mean_circ: 0.940162
Ran for 67550 frames Cell Events: 2178 mean_circ: 0.940107
Ran for 69050 frames Cell Events: 2234 mean_circ: 0.940168
Ran for 69550 frames Cell Events: 2248 mean_circ: 0.940236
Ran for 70050 frames Cell Events: 2256 mean_circ: 0.940282
Ran for 70550 frames Cell Events: 2268 mean_circ: 0.940373
Ran for 71050 frames Cell Events: 2288 mean_circ: 0.940392
Ran for 71550 frames Cell Events: 2303 mean_circ: 0.940434
Ran for 72550 frames Cell Events: 2342 mean_circ: 0.940358
Ran for 73050 frames Cell Events: 2353 mean_circ: 0.940418
Ran for 73550 frames Cell Events: 2368 mean_circ: 0.940403
Ran for 74050 frames Cell Events: 2382 mean_circ: 0.940271
Ran for 74550 frames Cell Events: 2394 mean_circ: 0.940242
Ran for 75050 frames Cell Events: 2414 mean_circ: 0.940253
Ran for 75550 frames Cell Events: 2434 mean_circ: 0.940237
Ran for 76050 frames Cell Events: 2454 mean_circ: 0.940255
Ran for 76550 frames Cell Events: 2462 mean_circ: 0.940295
Ran for 77550 frames Cell Events: 2501 mean_circ: 0.940415
Ran for 78050 frames Cell Events: 2514 mean_circ: 0.940375
Ran for 79050 frames Cell Events: 2543 mean_circ: 0.94038
Ran for 80050 frames Cell Events: 2578 mean_circ: 0.94047
Ran for 80550 frames Cell Events: 2597 mean_circ: 0.940368
Ran for 81050 frames Cell Events: 2614 mean_circ: 0.940394
Ran for 81550 frames Cell Events: 2626 mean_circ: 0.940436
Ran for 82050 frames Cell Events: 2646 mean_circ: 0.94049
Ran for 82550 frames Cell Events: 2664 mean_circ: 0.940478
Ran for 83050 frames Cell Events: 2675 mean_circ: 0.94044
Ran for 83550 frames Cell Events: 2693 mean_circ: 0.940467
Ran for 84550 frames Cell Events: 2741 mean_circ: 0.940355
Ran for 85550 frames Cell Events: 2768 mean_circ: 0.940417
Ran for 86050 frames Cell Events: 2783 mean_circ: 0.940352
Ran for 86550 frames Cell Events: 2808 mean_circ: 0.940256
Ran for 87050 frames Cell Events: 2823 mean_circ: 0.940317
Ran for 87550 frames Cell Events: 2840 mean_circ: 0.94033
Ran for 88050 frames Cell Events: 2857 mean_circ: 0.940226
Ran for 88550 frames Cell Events: 2874 mean_circ: 0.940088
Ran for 89550 frames Cell Events: 2894 mean_circ: 0.940062
Ran for 90050 frames Cell Events: 2907 mean_circ: 0.940098
Ran for 90550 frames Cell Events: 2925 mean_circ: 0.94002
Ran for 91050 frames Cell Events: 2938 mean_circ: 0.940091
Ran for 92050 frames Cell Events: 2982 mean_circ: 0.940023
Ran for 93550 frames Cell Events: 3024 mean_circ: 0.939904
Ran for 94050 frames Cell Events: 3038 mean_circ: 0.939955
Ran for 94550 frames Cell Events: 3044 mean_circ: 0.939999
Ran for 95550 frames Cell Events: 3079 mean_circ: 0.94003
Ran for 96050 frames Cell Events: 3096 mean_circ: 0.940033
Ran for 96550 frames Cell Events: 3120 mean_circ: 0.940117
Ran for 97050 frames Cell Events: 3131 mean_circ: 0.94017
Ran for 97550 frames Cell Events: 3149 mean_circ: 0.940225
Ran for 98050 frames Cell Events: 3165 mean_circ: 0.940245
Ran for 98550 frames Cell Events: 3178 mean_circ: 0.940264
Ran for 99050 frames Cell Events: 3201 mean_circ: 0.940247
Ran for 100550 frames Cell Events: 3245 mean_circ: 0.940163
Ran for 101050 frames Cell Events: 3254 mean_circ: 0.940191
Ran for 102550 frames Cell Events: 3307 mean_circ: 0.940282
Ran for 103550 frames Cell Events: 3328 mean_circ: 0.940348
Ran for 104050 frames Cell Events: 3344 mean_circ: 0.940348
Ran for 105050 frames Cell Events: 3373 mean_circ: 0.940412
Ran for 105550 frames Cell Events: 3399 mean_circ: 0.940275
Ran for 106050 frames Cell Events: 3412 mean_circ: 0.940192
Ran for 106550 frames Cell Events: 3430 mean_circ: 0.94019
Ran for 107050 frames Cell Events: 3446 mean_circ: 0.9402
Ran for 107550 frames Cell Events: 3461 mean_circ: 0.940197
Ran for 108550 frames Cell Events: 3495 mean_circ: 0.940103
Ran for 109550 frames Cell Events: 3529 mean_circ: 0.940132
Ran for 110050 frames Cell Events: 3556 mean_circ: 0.94015
Ran for 110550 frames Cell Events: 3578 mean_circ: 0.940167
Ran for 111050 frames Cell Events: 3601 mean_circ: 0.940083
Ran for 111550 frames Cell Events: 3606 mean_circ: 0.940031
Ran for 112550 frames Cell Events: 3641 mean_circ: 0.940061
Ran for 113050 frames Cell Events: 3660 mean_circ: 0.939978
Ran for 114050 frames Cell Events: 3690 mean_circ: 0.940028
Ran for 114550 frames Cell Events: 3703 mean_circ: 0.940022
Ran for 115050 frames Cell Events: 3713 mean_circ: 0.940046
Ran for 116050 frames Cell Events: 3746 mean_circ: 0.940028
Ran for 116550 frames Cell Events: 3762 mean_circ: 0.939941
Ran for 117050 frames Cell Events: 3782 mean_circ: 0.939942
Ran for 117550 frames Cell Events: 3791 mean_circ: 0.939907
Ran for 118050 frames Cell Events: 3808 mean_circ: 0.939957
Ran for 120050 frames Cell Events: 3878 mean_circ: 0.940049
Ran for 121050 frames Cell Events: 3917 mean_circ: 0.940084
Ran for 121550 frames Cell Events: 3938 mean_circ: 0.940036
Ran for 122050 frames Cell Events: 3951 mean_circ: 0.940014
Ran for 123050 frames Cell Events: 3983 mean_circ: 0.940064
Ran for 123550 frames Cell Events: 3997 mean_circ: 0.940037
Ran for 124050 frames Cell Events: 4015 mean_circ: 0.940019
Ran for 124550 frames Cell Events: 4034 mean_circ: 0.940009
Ran for 125050 frames Cell Events: 4053 mean_circ: 0.939965
Ran for 126050 frames Cell Events: 4096 mean_circ: 0.939876
Ran for 126550 frames Cell Events: 4115 mean_circ: 0.939912
Ran for 127050 frames Cell Events: 4130 mean_circ: 0.939921
Ran for 127550 frames Cell Events: 4144 mean_circ: 0.939949
Ran for 128050 frames Cell Events: 4159 mean_circ: 0.939961
Ran for 129050 frames Cell Events: 4191 mean_circ: 0.940042
Ran for 129550 frames Cell Events: 4211 mean_circ: 0.940041
Ran for 130050 frames Cell Events: 4227 mean_circ: 0.940018
Ran for 132050 frames Cell Events: 4281 mean_circ: 0.940067
Ran for 132550 frames Cell Events: 4305 mean_circ: 0.940086
Ran for 133050 frames Cell Events: 4322 mean_circ: 0.94014
Ran for 133550 frames Cell Events: 4337 mean_circ: 0.940135
Ran for 134050 frames Cell Events: 4358 mean_circ: 0.940122
Ran for 134550 frames Cell Events: 4372 mean_circ: 0.940095
Ran for 135050 frames Cell Events: 4384 mean_circ: 0.94014
Ran for 135550 frames Cell Events: 4400 mean_circ: 0.940103
Ran for 136050 frames Cell Events: 4414 mean_circ: 0.940119
Ran for 136550 frames Cell Events: 4429 mean_circ: 0.940126
Ran for 137050 frames Cell Events: 4456 mean_circ: 0.940142
Ran for 138050 frames Cell Events: 4483 mean_circ: 0.940196
Ran for 138550 frames Cell Events: 4497 mean_circ: 0.940221
Ran for 139050 frames Cell Events: 4508 mean_circ: 0.940235
Ran for 139550 frames Cell Events: 4521 mean_circ: 0.940229
Ran for 140550 frames Cell Events: 4556 mean_circ: 0.94026
Ran for 142550 frames Cell Events: 4628 mean_circ: 0.940243
Ran for 143050 frames Cell Events: 4647 mean_circ: 0.940235
Ran for 143550 frames Cell Events: 4660 mean_circ: 0.940286
Ran for 144050 frames Cell Events: 4681 mean_circ: 0.940239
Ran for 144550 frames Cell Events: 4699 mean_circ: 0.94026
Ran for 145050 frames Cell Events: 4708 mean_circ: 0.940258
Ran for 145550 frames Cell Events: 4720 mean_circ: 0.940277
Ran for 146050 frames Cell Events: 4735 mean_circ: 0.94024
Ran for 146550 frames Cell Events: 4745 mean_circ: 0.94027
Ran for 147050 frames Cell Events: 4756 mean_circ: 0.940276
Ran for 147550 frames Cell Events: 4776 mean_circ: 0.940246
Ran for 148050 frames Cell Events: 4792 mean_circ: 0.940274
Ran for 149050 frames Cell Events: 4822 mean_circ: 0.940233
Ran for 151550 frames Cell Events: 4918 mean_circ: 0.940314
Ran for 152050 frames Cell Events: 4933 mean_circ: 0.940335
Ran for 153050 frames Cell Events: 4968 mean_circ: 0.940282
Ran for 153550 frames Cell Events: 4982 mean_circ: 0.940217
Ran for 154050 frames Cell Events: 4989 mean_circ: 0.940208
Ran for 154550 frames Cell Events: 5000 mean_circ: 0.940208
Ran for 155050 frames Cell Events: 5011 mean_circ: 0.94025
Ran for 155550 frames Cell Events: 5034 mean_circ: 0.940288
Ran for 156050 frames Cell Events: 5059 mean_circ: 0.940337
Ran for 157050 frames Cell Events: 5094 mean_circ: 0.940312
Ran for 157550 frames Cell Events: 5104 mean_circ: 0.940291
Ran for 158050 frames Cell Events: 5117 mean_circ: 0.940268
Ran for 158550 frames Cell Events: 5141 mean_circ: 0.940209
Ran for 160050 frames Cell Events: 5198 mean_circ: 0.940179
Ran for 160550 frames Cell Events: 5212 mean_circ: 0.940185
Ran for 161550 frames Cell Events: 5253 mean_circ: 0.94021
Ran for 162550 frames Cell Events: 5291 mean_circ: 0.940161
Ran for 164050 frames Cell Events: 5339 mean_circ: 0.940185
Ran for 165050 frames Cell Events: 5365 mean_circ: 0.940176
Ran for 166550 frames Cell Events: 5407 mean_circ: 0.94023
Ran for 167550 frames Cell Events: 5433 mean_circ: 0.940247
Ran for 168050 frames Cell Events: 5444 mean_circ: 0.940216
Ran for 169050 frames Cell Events: 5473 mean_circ: 0.940198
Ran for 169550 frames Cell Events: 5486 mean_circ: 0.940161
Ran for 170050 frames Cell Events: 5498 mean_circ: 0.940174
Ran for 170550 frames Cell Events: 5511 mean_circ: 0.940177
Ran for 171050 frames Cell Events: 5527 mean_circ: 0.940204
Ran for 171550 frames Cell Events: 5549 mean_circ: 0.940171
Ran for 172550 frames Cell Events: 5582 mean_circ: 0.940145
Ran for 173050 frames Cell Events: 5597 mean_circ: 0.940089
Ran for 174050 frames Cell Events: 5646 mean_circ: 0.940103
Ran for 174550 frames Cell Events: 5657 mean_circ: 0.940098
Ran for 175050 frames Cell Events: 5673 mean_circ: 0.940061
Ran for 176550 frames Cell Events: 5722 mean_circ: 0.940005
Ran for 177050 frames Cell Events: 5735 mean_circ: 0.940013
Ran for 177550 frames Cell Events: 5757 mean_circ: 0.939975
Ran for 179550 frames Cell Events: 5830 mean_circ: 0.939931
Ran for 180550 frames Cell Events: 5866 mean_circ: 0.93997
Ran for 181550 frames Cell Events: 5901 mean_circ: 0.939895
Ran for 182550 frames Cell Events: 5932 mean_circ: 0.939911
Ran for 183050 frames Cell Events: 5944 mean_circ: 0.939899
Ran for 184050 frames Cell Events: 5979 mean_circ: 0.939897
Ran for 185550 frames Cell Events: 6021 mean_circ: 0.939874
Ran for 186050 frames Cell Events: 6031 mean_circ: 0.939887
Ran for 186550 frames Cell Events: 6045 mean_circ: 0.939883
Ran for 188050 frames Cell Events: 6105 mean_circ: 0.939857
Ran for 190050 frames Cell Events: 6172 mean_circ: 0.939774
Ran for 191050 frames Cell Events: 6201 mean_circ: 0.939798
Ran for 192050 frames Cell Events: 6240 mean_circ: 0.939881
Ran for 192550 frames Cell Events: 6259 mean_circ: 0.939867
Ran for 193050 frames Cell Events: 6277 mean_circ: 0.939864
Ran for 194050 frames Cell Events: 6312 mean_circ: 0.939791
Ran for 194550 frames Cell Events: 6327 mean_circ: 0.939775
Ran for 195050 frames Cell Events: 6350 mean_circ: 0.939764
Ran for 196550 frames Cell Events: 6413 mean_circ: 0.93975
Ran for 197550 frames Cell Events: 6468 mean_circ: 0.939766
Ran for 198550 frames Cell Events: 6507 mean_circ: 0.939768
Ran for 199050 frames Cell Events: 6519 mean_circ: 0.939756
Ran for 199550 frames Cell Events: 6532 mean_circ: 0.939761
Ran for 200050 frames Cell Events: 6546 mean_circ: 0.939762
Ran for 201050 frames Cell Events: 6584 mean_circ: 0.93982
Ran for 201550 frames Cell Events: 6601 mean_circ: 0.939825
Ran for 202050 frames Cell Events: 6622 mean_circ: 0.939808
Ran for 202550 frames Cell Events: 6636 mean_circ: 0.93984
Ran for 204050 frames Cell Events: 6698 mean_circ: 0.939866
Ran for 204550 frames Cell Events: 6708 mean_circ: 0.939829
Ran for 205050 frames Cell Events: 6721 mean_circ: 0.939828
Ran for 205550 frames Cell Events: 6736 mean_circ: 0.939849
Ran for 206050 frames Cell Events: 6749 mean_circ: 0.939891
Ran for 206550 frames Cell Events: 6771 mean_circ: 0.939864
Ran for 207050 frames Cell Events: 6790 mean_circ: 0.939841
Ran for 207550 frames Cell Events: 6800 mean_circ: 0.939853
Ran for 208050 frames Cell Events: 6818 mean_circ: 0.93986
Ran for 210550 frames Cell Events: 6917 mean_circ: 0.939884
Ran for 211050 frames Cell Events: 6935 mean_circ: 0.939897
Ran for 211550 frames Cell Events: 6956 mean_circ: 0.939897
Ran for 212050 frames Cell Events: 6975 mean_circ: 0.939824
Ran for 212550 frames Cell Events: 6988 mean_circ: 0.939837
Ran for 214050 frames Cell Events: 7026 mean_circ: 0.939809
Ran for 214550 frames Cell Events: 7041 mean_circ: 0.939809
Ran for 215050 frames Cell Events: 7066 mean_circ: 0.939826
Ran for 215550 frames Cell Events: 7093 mean_circ: 0.939821
Ran for 216050 frames Cell Events: 7113 mean_circ: 0.939826
Ran for 217050 frames Cell Events: 7150 mean_circ: 0.939795
Ran for 218050 frames Cell Events: 7182 mean_circ: 0.939786
Ran for 218550 frames Cell Events: 7199 mean_circ: 0.939769
Ran for 219050 frames Cell Events: 7218 mean_circ: 0.939765
Ran for 219550 frames Cell Events: 7251 mean_circ: 0.939815
Ran for 220050 frames Cell Events: 7269 mean_circ: 0.939823
Ran for 220550 frames Cell Events: 7288 mean_circ: 0.939863
Ran for 221550 frames Cell Events: 7325 mean_circ: 0.939814
Ran for 222050 frames Cell Events: 7341 mean_circ: 0.939824
Ran for 222550 frames Cell Events: 7359 mean_circ: 0.93985
Ran for 223050 frames Cell Events: 7373 mean_circ: 0.939827
Ran for 224050 frames Cell Events: 7414 mean_circ: 0.939845
Ran for 224550 frames Cell Events: 7437 mean_circ: 0.939815
Ran for 225050 frames Cell Events: 7444 mean_circ: 0.939812
Ran for 225550 frames Cell Events: 7463 mean_circ: 0.939796
Ran for 227050 frames Cell Events: 7519 mean_circ: 0.93982
Ran for 227550 frames Cell Events: 7535 mean_circ: 0.9398
Ran for 228050 frames Cell Events: 7559 mean_circ: 0.939815
Ran for 228550 frames Cell Events: 7579 mean_circ: 0.939825
Ran for 229050 frames Cell Events: 7600 mean_circ: 0.939836
Ran for 229550 frames Cell Events: 7618 mean_circ: 0.939828
Ran for 230550 frames Cell Events: 7648 mean_circ: 0.939842
Ran for 231050 frames Cell Events: 7666 mean_circ: 0.939842
Ran for 231550 frames Cell Events: 7679 mean_circ: 0.939847
Ran for 232550 frames Cell Events: 7706 mean_circ: 0.939878
Ran for 233050 frames Cell Events: 7725 mean_circ: 0.939892
Ran for 234550 frames Cell Events: 7784 mean_circ: 0.939778
Ran for 235050 frames Cell Events: 7796 mean_circ: 0.939777
Ran for 236550 frames Cell Events: 7855 mean_circ: 0.9398
Ran for 237050 frames Cell Events: 7872 mean_circ: 0.939777
Ran for 237550 frames Cell Events: 7889 mean_circ: 0.939789
Ran for 238050 frames Cell Events: 7909 mean_circ: 0.939791
Ran for 238550 frames Cell Events: 7933 mean_circ: 0.939811
Ran for 240050 frames Cell Events: 7991 mean_circ: 0.939835
Ran for 240550 frames Cell Events: 8002 mean_circ: 0.939818
Ran for 241050 frames Cell Events: 8018 mean_circ: 0.939844
End this measurment..
Stopping time: 3.9021e+008
****************************************
Measurement finished
Mean Circularitiy: 0.939856
Mean Area: 596.933
Mean FL-1 intensity: 2894.82
Mean FL-2 intensity: 3962.9
Mean FL-3 intensity: 0
frames processed: 241480
Total Time: 120816ms
Number of Runs (new bg img) 0
Frames collected: 241480
Skipped frames: 15143
Rescued Frames: 2175251
Samples DAQ: 60370108
Samples written: 120739904
Samples per Channel: 60369952
FPS: 1998.75
Samples per second: 499687
Expected samples/s: 500000
Events: 8035
Events per second: 66.5063
jumped back (PMT): 4
#Frames read, frequency
# 0 frames :331549
# 1 frames :133403
# 2 frames :5357
# 3 frames :1893
# 4 frames :975
# 5 frames :362
# 6 frames :1894
# 7 frames :2185
# 8 frames :1053
# 9 frames :593
# 10 frames :1413
# 11 frames :579
# 12 frames :408
# 13 frames :294
# 14 frames :191
# 15 frames :161
# 16 frames :156
# 17 frames :135
# 18 frames :89
# 19 frames :43
# 20 frames :28
# 21 frames :33
# 22 frames :14
# 23 frames :23
# 24 frames :18
# 25 frames :15
# 26 frames :7
# 27 frames :3
# 28 frames :3
# 29 frames :5
# 30 frames :9
# 31 frames :1
# 32 frames :1
# 33 frames :3
# 34 frames :3
# 35 frames :1
# 36 frames :1
# 44 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8922
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0