Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_19.01.37
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "495b8b58c7531fe593accc2e62ae06fc",
"name": "M1_20170618_1902_dsRNA_S3_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:01:58"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8024 (max 8025) in '8024'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.0256
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 4.02675e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 2 mean_circ: 0.955516
Ran for 2050 frames Cell Events: 64 mean_circ: 0.952455
Ran for 2550 frames Cell Events: 82 mean_circ: 0.946945
Ran for 3550 frames Cell Events: 102 mean_circ: 0.945547
Ran for 4050 frames Cell Events: 121 mean_circ: 0.946522
Ran for 4550 frames Cell Events: 138 mean_circ: 0.946799
Ran for 6050 frames Cell Events: 176 mean_circ: 0.947384
Ran for 6550 frames Cell Events: 192 mean_circ: 0.947647
Ran for 7050 frames Cell Events: 202 mean_circ: 0.948072
Ran for 7550 frames Cell Events: 218 mean_circ: 0.948482
Ran for 9050 frames Cell Events: 266 mean_circ: 0.94877
Ran for 9550 frames Cell Events: 280 mean_circ: 0.948828
Ran for 10050 frames Cell Events: 293 mean_circ: 0.949365
Ran for 10550 frames Cell Events: 313 mean_circ: 0.949519
Ran for 11050 frames Cell Events: 323 mean_circ: 0.949406
Ran for 12050 frames Cell Events: 359 mean_circ: 0.949915
Ran for 12550 frames Cell Events: 367 mean_circ: 0.949456
Ran for 13050 frames Cell Events: 377 mean_circ: 0.949178
Ran for 13550 frames Cell Events: 396 mean_circ: 0.949444
Ran for 14050 frames Cell Events: 416 mean_circ: 0.949557
Ran for 14550 frames Cell Events: 436 mean_circ: 0.948889
Ran for 16050 frames Cell Events: 494 mean_circ: 0.948704
Ran for 17050 frames Cell Events: 517 mean_circ: 0.948747
Ran for 17550 frames Cell Events: 531 mean_circ: 0.948947
Ran for 19050 frames Cell Events: 572 mean_circ: 0.948765
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Ran for 20050 frames Cell Events: 607 mean_circ: 0.947815
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Ran for 22050 frames Cell Events: 659 mean_circ: 0.948194
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Ran for 23050 frames Cell Events: 682 mean_circ: 0.947601
Ran for 23550 frames Cell Events: 704 mean_circ: 0.947624
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Ran for 30050 frames Cell Events: 879 mean_circ: 0.946485
Ran for 30550 frames Cell Events: 892 mean_circ: 0.946657
Ran for 31050 frames Cell Events: 902 mean_circ: 0.946819
Ran for 31550 frames Cell Events: 916 mean_circ: 0.946848
Ran for 33550 frames Cell Events: 983 mean_circ: 0.947007
Ran for 34050 frames Cell Events: 996 mean_circ: 0.946943
Ran for 34550 frames Cell Events: 1008 mean_circ: 0.947138
Ran for 35050 frames Cell Events: 1021 mean_circ: 0.946986
Ran for 36550 frames Cell Events: 1063 mean_circ: 0.946735
Ran for 37050 frames Cell Events: 1081 mean_circ: 0.946816
Ran for 37550 frames Cell Events: 1095 mean_circ: 0.946726
Ran for 39050 frames Cell Events: 1153 mean_circ: 0.946842
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Ran for 40050 frames Cell Events: 1177 mean_circ: 0.94683
Ran for 40550 frames Cell Events: 1194 mean_circ: 0.946898
Ran for 41550 frames Cell Events: 1221 mean_circ: 0.946685
Ran for 42050 frames Cell Events: 1228 mean_circ: 0.946567
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Ran for 43550 frames Cell Events: 1267 mean_circ: 0.946103
Ran for 44050 frames Cell Events: 1277 mean_circ: 0.946139
Ran for 44550 frames Cell Events: 1291 mean_circ: 0.946104
Ran for 45050 frames Cell Events: 1301 mean_circ: 0.946134
Ran for 46050 frames Cell Events: 1329 mean_circ: 0.946044
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Ran for 48550 frames Cell Events: 1399 mean_circ: 0.945976
Ran for 49550 frames Cell Events: 1427 mean_circ: 0.945958
Ran for 50550 frames Cell Events: 1447 mean_circ: 0.945905
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Ran for 61050 frames Cell Events: 1713 mean_circ: 0.94569
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Ran for 62050 frames Cell Events: 1740 mean_circ: 0.945765
Ran for 62550 frames Cell Events: 1761 mean_circ: 0.945843
Ran for 63550 frames Cell Events: 1789 mean_circ: 0.945856
Ran for 64050 frames Cell Events: 1802 mean_circ: 0.945858
Ran for 64550 frames Cell Events: 1813 mean_circ: 0.945805
Ran for 65550 frames Cell Events: 1871 mean_circ: 0.945693
Ran for 66050 frames Cell Events: 1886 mean_circ: 0.945752
Ran for 66550 frames Cell Events: 1899 mean_circ: 0.945816
Ran for 67550 frames Cell Events: 1920 mean_circ: 0.945782
Ran for 68050 frames Cell Events: 1931 mean_circ: 0.945863
Ran for 68550 frames Cell Events: 1940 mean_circ: 0.945906
Ran for 69050 frames Cell Events: 1957 mean_circ: 0.945895
Ran for 69550 frames Cell Events: 1966 mean_circ: 0.945934
Ran for 70050 frames Cell Events: 1980 mean_circ: 0.945986
Ran for 70550 frames Cell Events: 1993 mean_circ: 0.945821
Ran for 71050 frames Cell Events: 2016 mean_circ: 0.945773
Ran for 71550 frames Cell Events: 2028 mean_circ: 0.945801
Ran for 72050 frames Cell Events: 2042 mean_circ: 0.945774
Ran for 72550 frames Cell Events: 2048 mean_circ: 0.94579
Ran for 73550 frames Cell Events: 2076 mean_circ: 0.945818
Ran for 74550 frames Cell Events: 2098 mean_circ: 0.945655
Ran for 75050 frames Cell Events: 2109 mean_circ: 0.945671
Ran for 75550 frames Cell Events: 2126 mean_circ: 0.945695
Ran for 76050 frames Cell Events: 2143 mean_circ: 0.9457
Ran for 76550 frames Cell Events: 2155 mean_circ: 0.945767
Ran for 77050 frames Cell Events: 2167 mean_circ: 0.945804
Ran for 78050 frames Cell Events: 2217 mean_circ: 0.945714
Ran for 78550 frames Cell Events: 2237 mean_circ: 0.945688
Ran for 79050 frames Cell Events: 2253 mean_circ: 0.945832
Ran for 80050 frames Cell Events: 2284 mean_circ: 0.945704
Ran for 82050 frames Cell Events: 2336 mean_circ: 0.945898
Ran for 82550 frames Cell Events: 2353 mean_circ: 0.945899
Ran for 83050 frames Cell Events: 2360 mean_circ: 0.945979
Ran for 83550 frames Cell Events: 2375 mean_circ: 0.945984
Ran for 84050 frames Cell Events: 2385 mean_circ: 0.945989
Ran for 85050 frames Cell Events: 2415 mean_circ: 0.945841
Ran for 85550 frames Cell Events: 2432 mean_circ: 0.945882
Ran for 86550 frames Cell Events: 2467 mean_circ: 0.94598
Ran for 87050 frames Cell Events: 2477 mean_circ: 0.946008
Ran for 87550 frames Cell Events: 2491 mean_circ: 0.945962
Ran for 88050 frames Cell Events: 2509 mean_circ: 0.946011
Ran for 88550 frames Cell Events: 2523 mean_circ: 0.945941
Ran for 89050 frames Cell Events: 2546 mean_circ: 0.945947
Ran for 90050 frames Cell Events: 2565 mean_circ: 0.945967
Ran for 90550 frames Cell Events: 2582 mean_circ: 0.946002
Ran for 91050 frames Cell Events: 2602 mean_circ: 0.945983
Ran for 91550 frames Cell Events: 2618 mean_circ: 0.945971
Ran for 92050 frames Cell Events: 2627 mean_circ: 0.946043
Ran for 92550 frames Cell Events: 2642 mean_circ: 0.946066
Ran for 93050 frames Cell Events: 2660 mean_circ: 0.946096
Ran for 93550 frames Cell Events: 2668 mean_circ: 0.946143
Ran for 94050 frames Cell Events: 2681 mean_circ: 0.946119
Ran for 94550 frames Cell Events: 2693 mean_circ: 0.946144
Ran for 95050 frames Cell Events: 2710 mean_circ: 0.946185
Ran for 97050 frames Cell Events: 2774 mean_circ: 0.946202
Ran for 98550 frames Cell Events: 2818 mean_circ: 0.945948
Ran for 99550 frames Cell Events: 2852 mean_circ: 0.945903
Ran for 100050 frames Cell Events: 2871 mean_circ: 0.945867
Ran for 100550 frames Cell Events: 2886 mean_circ: 0.94574
Ran for 101050 frames Cell Events: 2898 mean_circ: 0.945654
Ran for 101550 frames Cell Events: 2908 mean_circ: 0.945569
Ran for 102050 frames Cell Events: 2923 mean_circ: 0.945636
Ran for 102550 frames Cell Events: 2935 mean_circ: 0.945615
Ran for 103050 frames Cell Events: 2942 mean_circ: 0.945616
Ran for 103550 frames Cell Events: 2948 mean_circ: 0.945582
Ran for 104050 frames Cell Events: 2963 mean_circ: 0.945583
Ran for 104550 frames Cell Events: 2981 mean_circ: 0.945574
Ran for 105050 frames Cell Events: 2989 mean_circ: 0.945509
Ran for 106550 frames Cell Events: 3041 mean_circ: 0.945554
Ran for 107050 frames Cell Events: 3063 mean_circ: 0.945436
Ran for 108050 frames Cell Events: 3103 mean_circ: 0.945498
Ran for 108550 frames Cell Events: 3113 mean_circ: 0.945494
Ran for 109050 frames Cell Events: 3122 mean_circ: 0.945494
Ran for 109550 frames Cell Events: 3142 mean_circ: 0.945499
Ran for 110550 frames Cell Events: 3175 mean_circ: 0.945493
Ran for 111050 frames Cell Events: 3180 mean_circ: 0.945481
Ran for 112550 frames Cell Events: 3213 mean_circ: 0.945447
Ran for 113050 frames Cell Events: 3236 mean_circ: 0.945315
Ran for 113550 frames Cell Events: 3254 mean_circ: 0.945293
Ran for 114050 frames Cell Events: 3266 mean_circ: 0.945343
Ran for 114550 frames Cell Events: 3283 mean_circ: 0.945372
Ran for 115050 frames Cell Events: 3302 mean_circ: 0.945354
Ran for 115550 frames Cell Events: 3317 mean_circ: 0.945405
Ran for 116050 frames Cell Events: 3328 mean_circ: 0.945394
Ran for 116550 frames Cell Events: 3336 mean_circ: 0.945384
Ran for 117050 frames Cell Events: 3349 mean_circ: 0.945324
Ran for 117550 frames Cell Events: 3360 mean_circ: 0.945322
Ran for 118550 frames Cell Events: 3387 mean_circ: 0.945305
Ran for 119050 frames Cell Events: 3404 mean_circ: 0.94535
Ran for 119550 frames Cell Events: 3425 mean_circ: 0.945383
Ran for 120050 frames Cell Events: 3439 mean_circ: 0.945349
Ran for 120550 frames Cell Events: 3448 mean_circ: 0.945342
Ran for 121550 frames Cell Events: 3469 mean_circ: 0.945367
Ran for 122050 frames Cell Events: 3479 mean_circ: 0.945377
Ran for 122550 frames Cell Events: 3498 mean_circ: 0.94532
Ran for 123550 frames Cell Events: 3537 mean_circ: 0.945268
Ran for 124050 frames Cell Events: 3546 mean_circ: 0.945297
Ran for 124550 frames Cell Events: 3560 mean_circ: 0.945293
Ran for 125050 frames Cell Events: 3576 mean_circ: 0.945215
Ran for 125550 frames Cell Events: 3589 mean_circ: 0.945129
Ran for 126050 frames Cell Events: 3605 mean_circ: 0.945029
Ran for 126550 frames Cell Events: 3622 mean_circ: 0.945127
Ran for 127050 frames Cell Events: 3631 mean_circ: 0.945145
Ran for 127550 frames Cell Events: 3642 mean_circ: 0.945218
Ran for 128050 frames Cell Events: 3662 mean_circ: 0.945245
Ran for 128550 frames Cell Events: 3675 mean_circ: 0.945233
Ran for 129050 frames Cell Events: 3687 mean_circ: 0.945128
Ran for 129550 frames Cell Events: 3699 mean_circ: 0.945089
Ran for 130050 frames Cell Events: 3708 mean_circ: 0.945079
Ran for 130550 frames Cell Events: 3722 mean_circ: 0.945053
Ran for 131050 frames Cell Events: 3738 mean_circ: 0.944967
Ran for 132050 frames Cell Events: 3764 mean_circ: 0.944997
Ran for 133050 frames Cell Events: 3794 mean_circ: 0.944938
Ran for 133550 frames Cell Events: 3809 mean_circ: 0.944922
Ran for 134050 frames Cell Events: 3826 mean_circ: 0.944907
Ran for 135550 frames Cell Events: 3872 mean_circ: 0.944901
Ran for 136050 frames Cell Events: 3885 mean_circ: 0.944899
Ran for 136550 frames Cell Events: 3907 mean_circ: 0.944905
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Ran for 137550 frames Cell Events: 3931 mean_circ: 0.944976
Ran for 138050 frames Cell Events: 3944 mean_circ: 0.944947
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Ran for 139050 frames Cell Events: 3978 mean_circ: 0.944915
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Ran for 140550 frames Cell Events: 4035 mean_circ: 0.944883
Ran for 141050 frames Cell Events: 4051 mean_circ: 0.94487
Ran for 142050 frames Cell Events: 4086 mean_circ: 0.944946
Ran for 142550 frames Cell Events: 4111 mean_circ: 0.945028
Ran for 143550 frames Cell Events: 4140 mean_circ: 0.945023
Ran for 144550 frames Cell Events: 4159 mean_circ: 0.945044
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Ran for 146050 frames Cell Events: 4213 mean_circ: 0.945117
Ran for 146550 frames Cell Events: 4228 mean_circ: 0.94511
Ran for 148050 frames Cell Events: 4278 mean_circ: 0.945041
Ran for 148550 frames Cell Events: 4289 mean_circ: 0.945067
Ran for 149050 frames Cell Events: 4306 mean_circ: 0.945124
Ran for 149550 frames Cell Events: 4324 mean_circ: 0.945164
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Ran for 151050 frames Cell Events: 4368 mean_circ: 0.945139
Ran for 151550 frames Cell Events: 4385 mean_circ: 0.945184
Ran for 152050 frames Cell Events: 4400 mean_circ: 0.945211
Ran for 153050 frames Cell Events: 4421 mean_circ: 0.9452
Ran for 154050 frames Cell Events: 4444 mean_circ: 0.945207
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Ran for 155550 frames Cell Events: 4497 mean_circ: 0.945124
Ran for 156550 frames Cell Events: 4521 mean_circ: 0.945181
Ran for 157550 frames Cell Events: 4548 mean_circ: 0.945213
Ran for 158050 frames Cell Events: 4565 mean_circ: 0.945217
Ran for 158550 frames Cell Events: 4577 mean_circ: 0.945247
Ran for 159050 frames Cell Events: 4588 mean_circ: 0.945248
Ran for 160550 frames Cell Events: 4625 mean_circ: 0.945314
Ran for 162050 frames Cell Events: 4677 mean_circ: 0.945275
Ran for 162550 frames Cell Events: 4693 mean_circ: 0.94526
Ran for 163050 frames Cell Events: 4709 mean_circ: 0.945273
Ran for 163550 frames Cell Events: 4715 mean_circ: 0.945268
Ran for 164050 frames Cell Events: 4732 mean_circ: 0.945265
Ran for 164550 frames Cell Events: 4746 mean_circ: 0.945237
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Ran for 165550 frames Cell Events: 4778 mean_circ: 0.945219
Ran for 167050 frames Cell Events: 4811 mean_circ: 0.945224
Ran for 167550 frames Cell Events: 4822 mean_circ: 0.945222
Ran for 168550 frames Cell Events: 4839 mean_circ: 0.94524
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Ran for 170050 frames Cell Events: 4890 mean_circ: 0.945143
Ran for 170550 frames Cell Events: 4907 mean_circ: 0.945187
Ran for 171550 frames Cell Events: 4940 mean_circ: 0.945107
Ran for 172050 frames Cell Events: 4950 mean_circ: 0.945072
Ran for 172550 frames Cell Events: 4965 mean_circ: 0.945064
Ran for 173050 frames Cell Events: 4974 mean_circ: 0.945013
Ran for 173550 frames Cell Events: 5001 mean_circ: 0.944973
Ran for 174550 frames Cell Events: 5036 mean_circ: 0.944949
Ran for 175050 frames Cell Events: 5048 mean_circ: 0.944933
Ran for 175550 frames Cell Events: 5073 mean_circ: 0.944913
Ran for 176050 frames Cell Events: 5087 mean_circ: 0.944887
Ran for 176550 frames Cell Events: 5099 mean_circ: 0.944877
Ran for 177050 frames Cell Events: 5114 mean_circ: 0.94492
Ran for 178050 frames Cell Events: 5138 mean_circ: 0.94491
Ran for 178550 frames Cell Events: 5151 mean_circ: 0.944931
Ran for 179050 frames Cell Events: 5169 mean_circ: 0.944945
Ran for 180050 frames Cell Events: 5196 mean_circ: 0.944978
Ran for 182050 frames Cell Events: 5260 mean_circ: 0.944922
Ran for 182550 frames Cell Events: 5271 mean_circ: 0.944944
Ran for 183050 frames Cell Events: 5287 mean_circ: 0.944964
Ran for 184050 frames Cell Events: 5323 mean_circ: 0.944962
Ran for 185550 frames Cell Events: 5362 mean_circ: 0.944979
Ran for 186550 frames Cell Events: 5399 mean_circ: 0.944949
Ran for 187050 frames Cell Events: 5418 mean_circ: 0.944944
Ran for 187550 frames Cell Events: 5431 mean_circ: 0.944943
Ran for 188050 frames Cell Events: 5454 mean_circ: 0.944964
Ran for 188550 frames Cell Events: 5471 mean_circ: 0.944924
Ran for 189050 frames Cell Events: 5487 mean_circ: 0.944933
Ran for 189550 frames Cell Events: 5502 mean_circ: 0.944921
Ran for 190050 frames Cell Events: 5524 mean_circ: 0.944962
Ran for 191050 frames Cell Events: 5540 mean_circ: 0.944897
Ran for 191550 frames Cell Events: 5552 mean_circ: 0.944899
Ran for 192050 frames Cell Events: 5562 mean_circ: 0.944861
Ran for 193050 frames Cell Events: 5594 mean_circ: 0.944825
Ran for 193550 frames Cell Events: 5608 mean_circ: 0.944839
Ran for 194050 frames Cell Events: 5617 mean_circ: 0.944789
Ran for 194550 frames Cell Events: 5627 mean_circ: 0.944776
Ran for 196050 frames Cell Events: 5655 mean_circ: 0.944716
Ran for 196550 frames Cell Events: 5670 mean_circ: 0.944709
Ran for 197550 frames Cell Events: 5701 mean_circ: 0.944689
Ran for 198050 frames Cell Events: 5711 mean_circ: 0.944665
Ran for 199050 frames Cell Events: 5748 mean_circ: 0.944644
Ran for 199550 frames Cell Events: 5763 mean_circ: 0.944613
Ran for 200550 frames Cell Events: 5789 mean_circ: 0.944606
Ran for 201050 frames Cell Events: 5802 mean_circ: 0.944626
Ran for 201550 frames Cell Events: 5820 mean_circ: 0.944667
Ran for 202050 frames Cell Events: 5831 mean_circ: 0.944648
Ran for 202550 frames Cell Events: 5842 mean_circ: 0.944663
Ran for 203550 frames Cell Events: 5868 mean_circ: 0.94463
Ran for 204050 frames Cell Events: 5879 mean_circ: 0.944649
Ran for 205050 frames Cell Events: 5913 mean_circ: 0.9446
Ran for 205550 frames Cell Events: 5921 mean_circ: 0.944611
Ran for 206050 frames Cell Events: 5924 mean_circ: 0.944621
Ran for 208050 frames Cell Events: 5982 mean_circ: 0.944583
Ran for 208550 frames Cell Events: 6001 mean_circ: 0.944574
Ran for 209550 frames Cell Events: 6023 mean_circ: 0.944555
Ran for 211550 frames Cell Events: 6085 mean_circ: 0.94448
Ran for 213050 frames Cell Events: 6126 mean_circ: 0.944431
Ran for 213550 frames Cell Events: 6144 mean_circ: 0.944386
Ran for 214050 frames Cell Events: 6164 mean_circ: 0.944388
Ran for 214550 frames Cell Events: 6179 mean_circ: 0.944389
Ran for 215050 frames Cell Events: 6190 mean_circ: 0.944378
Ran for 215550 frames Cell Events: 6200 mean_circ: 0.944377
Ran for 216050 frames Cell Events: 6213 mean_circ: 0.944376
Ran for 217550 frames Cell Events: 6259 mean_circ: 0.944384
Ran for 218550 frames Cell Events: 6291 mean_circ: 0.944436
Ran for 219050 frames Cell Events: 6309 mean_circ: 0.944455
Ran for 219550 frames Cell Events: 6314 mean_circ: 0.944447
Ran for 220550 frames Cell Events: 6342 mean_circ: 0.944414
Ran for 221050 frames Cell Events: 6358 mean_circ: 0.944403
Ran for 221550 frames Cell Events: 6364 mean_circ: 0.944418
Ran for 222050 frames Cell Events: 6381 mean_circ: 0.944396
Ran for 222550 frames Cell Events: 6400 mean_circ: 0.944324
Ran for 223050 frames Cell Events: 6413 mean_circ: 0.944334
Ran for 223550 frames Cell Events: 6420 mean_circ: 0.944335
Ran for 224050 frames Cell Events: 6431 mean_circ: 0.944331
Ran for 224550 frames Cell Events: 6439 mean_circ: 0.94434
Ran for 225050 frames Cell Events: 6444 mean_circ: 0.94435
Ran for 225550 frames Cell Events: 6454 mean_circ: 0.944361
Ran for 226050 frames Cell Events: 6472 mean_circ: 0.944362
Ran for 226550 frames Cell Events: 6486 mean_circ: 0.944396
Ran for 227050 frames Cell Events: 6497 mean_circ: 0.944376
Ran for 227550 frames Cell Events: 6506 mean_circ: 0.944372
Ran for 228050 frames Cell Events: 6527 mean_circ: 0.944384
Ran for 229050 frames Cell Events: 6576 mean_circ: 0.944308
Ran for 230550 frames Cell Events: 6623 mean_circ: 0.944283
Ran for 231050 frames Cell Events: 6628 mean_circ: 0.944285
Ran for 231550 frames Cell Events: 6640 mean_circ: 0.944233
Ran for 232050 frames Cell Events: 6648 mean_circ: 0.944261
Ran for 232550 frames Cell Events: 6666 mean_circ: 0.944194
Ran for 233550 frames Cell Events: 6697 mean_circ: 0.944146
Ran for 234050 frames Cell Events: 6711 mean_circ: 0.944173
Ran for 234550 frames Cell Events: 6721 mean_circ: 0.944192
Ran for 235550 frames Cell Events: 6761 mean_circ: 0.94421
Ran for 236050 frames Cell Events: 6783 mean_circ: 0.944189
Ran for 236550 frames Cell Events: 6799 mean_circ: 0.944213
Ran for 237050 frames Cell Events: 6811 mean_circ: 0.944149
Ran for 237550 frames Cell Events: 6829 mean_circ: 0.944154
Ran for 238050 frames Cell Events: 6843 mean_circ: 0.944182
Ran for 238550 frames Cell Events: 6858 mean_circ: 0.944168
Ran for 239050 frames Cell Events: 6875 mean_circ: 0.944137
Ran for 240050 frames Cell Events: 6912 mean_circ: 0.944017
Ran for 240550 frames Cell Events: 6926 mean_circ: 0.944038
Ran for 242050 frames Cell Events: 6959 mean_circ: 0.944041
Ran for 242550 frames Cell Events: 6968 mean_circ: 0.944039
Ran for 243050 frames Cell Events: 6986 mean_circ: 0.944027
Ran for 244550 frames Cell Events: 7038 mean_circ: 0.944032
Ran for 245050 frames Cell Events: 7055 mean_circ: 0.944
Ran for 245550 frames Cell Events: 7064 mean_circ: 0.944025
Ran for 246050 frames Cell Events: 7074 mean_circ: 0.944048
Ran for 246550 frames Cell Events: 7091 mean_circ: 0.944083
Ran for 247050 frames Cell Events: 7105 mean_circ: 0.944077
Ran for 247550 frames Cell Events: 7117 mean_circ: 0.944083
Ran for 248050 frames Cell Events: 7126 mean_circ: 0.944096
Ran for 248550 frames Cell Events: 7137 mean_circ: 0.944129
Ran for 250050 frames Cell Events: 7188 mean_circ: 0.944134
Ran for 251050 frames Cell Events: 7225 mean_circ: 0.944089
Ran for 252550 frames Cell Events: 7263 mean_circ: 0.944113
Ran for 253550 frames Cell Events: 7286 mean_circ: 0.94411
Ran for 255050 frames Cell Events: 7339 mean_circ: 0.944192
Ran for 255550 frames Cell Events: 7358 mean_circ: 0.944196
Ran for 256050 frames Cell Events: 7376 mean_circ: 0.944215
Ran for 257050 frames Cell Events: 7415 mean_circ: 0.944125
Ran for 257550 frames Cell Events: 7435 mean_circ: 0.944164
Ran for 258050 frames Cell Events: 7450 mean_circ: 0.944105
Ran for 258550 frames Cell Events: 7457 mean_circ: 0.944072
Ran for 259050 frames Cell Events: 7472 mean_circ: 0.944068
Ran for 259550 frames Cell Events: 7481 mean_circ: 0.944078
Ran for 260050 frames Cell Events: 7498 mean_circ: 0.944076
Ran for 260550 frames Cell Events: 7517 mean_circ: 0.944095
Ran for 261050 frames Cell Events: 7536 mean_circ: 0.944103
Ran for 262050 frames Cell Events: 7573 mean_circ: 0.944101
Ran for 262550 frames Cell Events: 7590 mean_circ: 0.944059
Ran for 263050 frames Cell Events: 7606 mean_circ: 0.944098
Ran for 263550 frames Cell Events: 7627 mean_circ: 0.944078
Ran for 265050 frames Cell Events: 7669 mean_circ: 0.944088
Ran for 265550 frames Cell Events: 7684 mean_circ: 0.944089
Ran for 266050 frames Cell Events: 7695 mean_circ: 0.944091
Ran for 266550 frames Cell Events: 7712 mean_circ: 0.944063
Ran for 267050 frames Cell Events: 7731 mean_circ: 0.944055
Ran for 267550 frames Cell Events: 7748 mean_circ: 0.944025
Ran for 268050 frames Cell Events: 7766 mean_circ: 0.944043
Ran for 268550 frames Cell Events: 7784 mean_circ: 0.944056
Ran for 269050 frames Cell Events: 7799 mean_circ: 0.944044
Ran for 271550 frames Cell Events: 7871 mean_circ: 0.944
Ran for 272050 frames Cell Events: 7887 mean_circ: 0.943997
Ran for 272550 frames Cell Events: 7900 mean_circ: 0.943995
Ran for 273550 frames Cell Events: 7922 mean_circ: 0.943969
Ran for 274050 frames Cell Events: 7936 mean_circ: 0.943995
Ran for 274550 frames Cell Events: 7949 mean_circ: 0.943989
Ran for 275050 frames Cell Events: 7965 mean_circ: 0.944006
Ran for 276550 frames Cell Events: 8005 mean_circ: 0.944016
Ran for 277050 frames Cell Events: 8020 mean_circ: 0.943994
End this measurment..
Stopping time: 4.02813e+008
****************************************
Measurement finished
Mean Circularitiy: 0.943997
Mean Area: 519.613
Mean FL-1 intensity: 2488.26
Mean FL-2 intensity: 3456.31
Mean FL-3 intensity: 0
frames processed: 277049
Total Time: 138657ms
Number of Runs (new bg img) 0
Frames collected: 277199
Skipped frames: 10458
Rescued Frames: 1580288
Samples DAQ: 69299861
Samples written: 138599596
Samples per Channel: 69299798
FPS: 1999.17
Samples per second: 499794
Expected samples/s: 500000
Events: 8025
Events per second: 57.8767
jumped back (PMT): 17
#Frames read, frequency
# 0 frames :374310
# 1 frames :160219
# 2 frames :6312
# 3 frames :2073
# 4 frames :1110
# 5 frames :448
# 6 frames :1922
# 7 frames :2159
# 8 frames :1133
# 9 frames :710
# 10 frames :1829
# 11 frames :554
# 12 frames :501
# 13 frames :212
# 14 frames :149
# 15 frames :142
# 16 frames :151
# 17 frames :114
# 18 frames :78
# 19 frames :47
# 20 frames :40
# 21 frames :34
# 22 frames :26
# 23 frames :23
# 24 frames :17
# 25 frames :14
# 26 frames :10
# 27 frames :8
# 28 frames :4
# 29 frames :4
# 30 frames :3
# 31 frames :2
# 32 frames :1
# 33 frames :5
# 34 frames :1
# 35 frames :3
# 36 frames :1
# 37 frames :1
# 38 frames :2
# 39 frames :2
# 40 frames :2
# 42 frames :2
# 44 frames :1
# 45 frames :1
# 46 frames :1
# 48 frames :1
# 50 frames :1
# 54 frames :1
# 96 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.0256
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0