Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_19.03.53
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "21d0c02bd296619c5e27cc31c4e7c5ee",
"name": "M1_20170618_1932_set1_dsRNA_26b_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:04:11"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 6777 (max 6778) in '6777'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9754
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 4.04491e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 17 mean_circ: 0.922656
Ran for 1550 frames Cell Events: 30 mean_circ: 0.922233
Ran for 2550 frames Cell Events: 59 mean_circ: 0.923347
Ran for 3550 frames Cell Events: 72 mean_circ: 0.92406
Ran for 4050 frames Cell Events: 78 mean_circ: 0.923302
Ran for 4550 frames Cell Events: 84 mean_circ: 0.925629
Ran for 5050 frames Cell Events: 96 mean_circ: 0.927409
Ran for 6050 frames Cell Events: 111 mean_circ: 0.928249
Ran for 6550 frames Cell Events: 123 mean_circ: 0.929114
Ran for 7050 frames Cell Events: 129 mean_circ: 0.930702
Ran for 7550 frames Cell Events: 141 mean_circ: 0.931336
Ran for 8550 frames Cell Events: 161 mean_circ: 0.931968
Ran for 9050 frames Cell Events: 174 mean_circ: 0.932606
Ran for 10050 frames Cell Events: 201 mean_circ: 0.932756
Ran for 10550 frames Cell Events: 213 mean_circ: 0.933464
Ran for 11050 frames Cell Events: 219 mean_circ: 0.933214
Ran for 11550 frames Cell Events: 232 mean_circ: 0.933481
Ran for 12050 frames Cell Events: 243 mean_circ: 0.933426
Ran for 13050 frames Cell Events: 263 mean_circ: 0.933206
Ran for 13550 frames Cell Events: 273 mean_circ: 0.934154
Ran for 14050 frames Cell Events: 279 mean_circ: 0.934449
Ran for 14550 frames Cell Events: 292 mean_circ: 0.934494
Ran for 15050 frames Cell Events: 299 mean_circ: 0.933798
Ran for 16550 frames Cell Events: 323 mean_circ: 0.93318
Ran for 18050 frames Cell Events: 351 mean_circ: 0.932559
Ran for 18550 frames Cell Events: 357 mean_circ: 0.932445
Ran for 19050 frames Cell Events: 365 mean_circ: 0.932664
Ran for 19550 frames Cell Events: 382 mean_circ: 0.932695
Ran for 21050 frames Cell Events: 410 mean_circ: 0.932224
Ran for 21550 frames Cell Events: 420 mean_circ: 0.932451
Ran for 22050 frames Cell Events: 428 mean_circ: 0.932941
Ran for 22550 frames Cell Events: 437 mean_circ: 0.933339
Ran for 23550 frames Cell Events: 456 mean_circ: 0.933125
Ran for 24050 frames Cell Events: 466 mean_circ: 0.933592
Ran for 24550 frames Cell Events: 476 mean_circ: 0.933932
Ran for 25050 frames Cell Events: 487 mean_circ: 0.933932
Ran for 26050 frames Cell Events: 508 mean_circ: 0.934073
Ran for 26550 frames Cell Events: 517 mean_circ: 0.933733
Ran for 27050 frames Cell Events: 529 mean_circ: 0.933826
Ran for 28050 frames Cell Events: 556 mean_circ: 0.93343
Ran for 30550 frames Cell Events: 601 mean_circ: 0.933574
Ran for 31050 frames Cell Events: 607 mean_circ: 0.933714
Ran for 31550 frames Cell Events: 616 mean_circ: 0.933734
Ran for 32050 frames Cell Events: 628 mean_circ: 0.933987
Ran for 32550 frames Cell Events: 635 mean_circ: 0.934223
Ran for 33050 frames Cell Events: 650 mean_circ: 0.934773
Ran for 33550 frames Cell Events: 653 mean_circ: 0.934811
Ran for 34050 frames Cell Events: 659 mean_circ: 0.934869
Ran for 34550 frames Cell Events: 670 mean_circ: 0.934777
Ran for 35550 frames Cell Events: 688 mean_circ: 0.934344
Ran for 36050 frames Cell Events: 695 mean_circ: 0.933807
Ran for 36550 frames Cell Events: 697 mean_circ: 0.933859
Ran for 37050 frames Cell Events: 700 mean_circ: 0.934008
Ran for 38050 frames Cell Events: 714 mean_circ: 0.933996
Ran for 38550 frames Cell Events: 724 mean_circ: 0.934212
Ran for 39050 frames Cell Events: 730 mean_circ: 0.934208
Ran for 39550 frames Cell Events: 736 mean_circ: 0.934238
Ran for 40050 frames Cell Events: 749 mean_circ: 0.934024
Ran for 40550 frames Cell Events: 760 mean_circ: 0.933797
Ran for 41050 frames Cell Events: 767 mean_circ: 0.933708
Ran for 41550 frames Cell Events: 770 mean_circ: 0.933768
Ran for 42050 frames Cell Events: 776 mean_circ: 0.933676
Ran for 42550 frames Cell Events: 781 mean_circ: 0.933544
Ran for 43050 frames Cell Events: 788 mean_circ: 0.933406
Ran for 44050 frames Cell Events: 812 mean_circ: 0.933806
Ran for 44550 frames Cell Events: 820 mean_circ: 0.934141
Ran for 45050 frames Cell Events: 826 mean_circ: 0.934322
Ran for 45550 frames Cell Events: 841 mean_circ: 0.934376
Ran for 46550 frames Cell Events: 860 mean_circ: 0.934477
Ran for 47050 frames Cell Events: 871 mean_circ: 0.934647
Ran for 47550 frames Cell Events: 881 mean_circ: 0.934522
Ran for 48050 frames Cell Events: 887 mean_circ: 0.934676
Ran for 48550 frames Cell Events: 894 mean_circ: 0.934871
Ran for 49550 frames Cell Events: 914 mean_circ: 0.934699
Ran for 50050 frames Cell Events: 923 mean_circ: 0.934798
Ran for 50550 frames Cell Events: 934 mean_circ: 0.934959
Ran for 51050 frames Cell Events: 941 mean_circ: 0.934931
Ran for 52050 frames Cell Events: 965 mean_circ: 0.935118
Ran for 52550 frames Cell Events: 968 mean_circ: 0.935152
Ran for 53050 frames Cell Events: 973 mean_circ: 0.934896
Ran for 53550 frames Cell Events: 980 mean_circ: 0.934933
Ran for 54050 frames Cell Events: 987 mean_circ: 0.935099
Ran for 54550 frames Cell Events: 994 mean_circ: 0.935073
Ran for 55550 frames Cell Events: 1018 mean_circ: 0.934866
Ran for 56050 frames Cell Events: 1025 mean_circ: 0.935039
Ran for 57050 frames Cell Events: 1039 mean_circ: 0.934919
Ran for 57550 frames Cell Events: 1047 mean_circ: 0.935068
Ran for 58050 frames Cell Events: 1060 mean_circ: 0.935133
Ran for 59050 frames Cell Events: 1073 mean_circ: 0.935107
Ran for 59550 frames Cell Events: 1089 mean_circ: 0.934983
Ran for 60050 frames Cell Events: 1100 mean_circ: 0.934779
Ran for 60550 frames Cell Events: 1112 mean_circ: 0.934701
Ran for 61050 frames Cell Events: 1120 mean_circ: 0.934795
Ran for 61550 frames Cell Events: 1128 mean_circ: 0.934807
Ran for 62050 frames Cell Events: 1134 mean_circ: 0.9349
Ran for 62550 frames Cell Events: 1144 mean_circ: 0.934835
Ran for 63550 frames Cell Events: 1161 mean_circ: 0.93481
Ran for 64550 frames Cell Events: 1177 mean_circ: 0.934459
Ran for 65050 frames Cell Events: 1184 mean_circ: 0.9345
Ran for 65550 frames Cell Events: 1190 mean_circ: 0.934384
Ran for 66050 frames Cell Events: 1202 mean_circ: 0.934504
Ran for 67050 frames Cell Events: 1220 mean_circ: 0.934427
Ran for 67550 frames Cell Events: 1230 mean_circ: 0.934439
Ran for 68550 frames Cell Events: 1257 mean_circ: 0.934627
Ran for 69050 frames Cell Events: 1268 mean_circ: 0.934563
Ran for 70050 frames Cell Events: 1289 mean_circ: 0.934609
Ran for 70550 frames Cell Events: 1303 mean_circ: 0.934488
Ran for 71050 frames Cell Events: 1318 mean_circ: 0.93442
Ran for 72550 frames Cell Events: 1345 mean_circ: 0.934888
Ran for 73550 frames Cell Events: 1368 mean_circ: 0.934852
Ran for 74050 frames Cell Events: 1371 mean_circ: 0.934933
Ran for 74550 frames Cell Events: 1380 mean_circ: 0.934975
Ran for 76050 frames Cell Events: 1410 mean_circ: 0.935016
Ran for 77050 frames Cell Events: 1434 mean_circ: 0.935141
Ran for 77550 frames Cell Events: 1443 mean_circ: 0.935211
Ran for 78050 frames Cell Events: 1451 mean_circ: 0.935237
Ran for 78550 frames Cell Events: 1454 mean_circ: 0.935355
Ran for 79050 frames Cell Events: 1459 mean_circ: 0.935383
Ran for 79550 frames Cell Events: 1468 mean_circ: 0.935442
Ran for 80050 frames Cell Events: 1478 mean_circ: 0.935421
Ran for 80550 frames Cell Events: 1484 mean_circ: 0.935593
Ran for 81050 frames Cell Events: 1500 mean_circ: 0.93561
Ran for 82050 frames Cell Events: 1523 mean_circ: 0.935644
Ran for 83550 frames Cell Events: 1544 mean_circ: 0.935894
Ran for 84050 frames Cell Events: 1547 mean_circ: 0.935912
Ran for 84550 frames Cell Events: 1553 mean_circ: 0.935965
Ran for 85050 frames Cell Events: 1562 mean_circ: 0.936066
Ran for 85550 frames Cell Events: 1572 mean_circ: 0.935985
Ran for 86550 frames Cell Events: 1587 mean_circ: 0.935976
Ran for 87050 frames Cell Events: 1594 mean_circ: 0.93599
Ran for 87550 frames Cell Events: 1604 mean_circ: 0.935978
Ran for 88550 frames Cell Events: 1627 mean_circ: 0.936029
Ran for 89050 frames Cell Events: 1636 mean_circ: 0.93618
Ran for 89550 frames Cell Events: 1646 mean_circ: 0.936203
Ran for 90050 frames Cell Events: 1659 mean_circ: 0.936225
Ran for 90550 frames Cell Events: 1668 mean_circ: 0.936265
Ran for 91050 frames Cell Events: 1681 mean_circ: 0.93627
Ran for 91550 frames Cell Events: 1696 mean_circ: 0.936225
Ran for 92050 frames Cell Events: 1701 mean_circ: 0.936304
Ran for 92550 frames Cell Events: 1717 mean_circ: 0.936366
Ran for 93050 frames Cell Events: 1733 mean_circ: 0.936271
Ran for 93550 frames Cell Events: 1747 mean_circ: 0.936249
Ran for 94050 frames Cell Events: 1769 mean_circ: 0.936284
Ran for 94550 frames Cell Events: 1777 mean_circ: 0.936298
Ran for 95050 frames Cell Events: 1785 mean_circ: 0.93623
Ran for 95550 frames Cell Events: 1800 mean_circ: 0.936086
Ran for 97550 frames Cell Events: 1850 mean_circ: 0.936273
Ran for 98050 frames Cell Events: 1864 mean_circ: 0.936385
Ran for 98550 frames Cell Events: 1870 mean_circ: 0.936385
Ran for 99050 frames Cell Events: 1880 mean_circ: 0.936299
Ran for 99550 frames Cell Events: 1888 mean_circ: 0.936283
Ran for 100050 frames Cell Events: 1895 mean_circ: 0.936297
Ran for 100550 frames Cell Events: 1906 mean_circ: 0.936286
Ran for 101050 frames Cell Events: 1914 mean_circ: 0.936185
Ran for 101550 frames Cell Events: 1923 mean_circ: 0.936242
Ran for 102050 frames Cell Events: 1928 mean_circ: 0.93615
Ran for 102550 frames Cell Events: 1940 mean_circ: 0.936058
Ran for 103050 frames Cell Events: 1948 mean_circ: 0.936051
Ran for 103550 frames Cell Events: 1955 mean_circ: 0.936092
Ran for 104050 frames Cell Events: 1965 mean_circ: 0.93608
Ran for 104550 frames Cell Events: 1976 mean_circ: 0.936139
Ran for 105550 frames Cell Events: 1997 mean_circ: 0.935922
Ran for 107550 frames Cell Events: 2047 mean_circ: 0.93578
Ran for 108550 frames Cell Events: 2070 mean_circ: 0.935844
Ran for 109550 frames Cell Events: 2095 mean_circ: 0.93593
Ran for 110050 frames Cell Events: 2108 mean_circ: 0.935877
Ran for 110550 frames Cell Events: 2120 mean_circ: 0.935882
Ran for 111050 frames Cell Events: 2135 mean_circ: 0.935711
Ran for 111550 frames Cell Events: 2145 mean_circ: 0.935731
Ran for 112050 frames Cell Events: 2157 mean_circ: 0.935825
Ran for 112550 frames Cell Events: 2169 mean_circ: 0.935921
Ran for 113050 frames Cell Events: 2173 mean_circ: 0.935977
Ran for 115050 frames Cell Events: 2211 mean_circ: 0.936037
Ran for 115550 frames Cell Events: 2220 mean_circ: 0.936093
Ran for 116550 frames Cell Events: 2241 mean_circ: 0.93619
Ran for 117050 frames Cell Events: 2250 mean_circ: 0.936267
Ran for 117550 frames Cell Events: 2257 mean_circ: 0.936334
Ran for 118550 frames Cell Events: 2280 mean_circ: 0.936178
Ran for 119050 frames Cell Events: 2287 mean_circ: 0.936121
Ran for 119550 frames Cell Events: 2294 mean_circ: 0.936041
Ran for 120550 frames Cell Events: 2312 mean_circ: 0.936138
Ran for 121050 frames Cell Events: 2317 mean_circ: 0.936097
Ran for 121550 frames Cell Events: 2324 mean_circ: 0.936064
Ran for 122550 frames Cell Events: 2346 mean_circ: 0.936261
Ran for 123550 frames Cell Events: 2368 mean_circ: 0.936235
Ran for 124050 frames Cell Events: 2376 mean_circ: 0.936179
Ran for 124550 frames Cell Events: 2382 mean_circ: 0.936178
Ran for 126550 frames Cell Events: 2418 mean_circ: 0.936173
Ran for 127050 frames Cell Events: 2428 mean_circ: 0.936108
Ran for 127550 frames Cell Events: 2436 mean_circ: 0.936119
Ran for 128050 frames Cell Events: 2441 mean_circ: 0.936122
Ran for 128550 frames Cell Events: 2448 mean_circ: 0.936134
Ran for 129050 frames Cell Events: 2459 mean_circ: 0.936152
Ran for 130550 frames Cell Events: 2492 mean_circ: 0.936016
Ran for 131050 frames Cell Events: 2503 mean_circ: 0.93598
Ran for 131550 frames Cell Events: 2513 mean_circ: 0.935836
Ran for 132050 frames Cell Events: 2520 mean_circ: 0.935773
Ran for 133050 frames Cell Events: 2535 mean_circ: 0.935744
Ran for 133550 frames Cell Events: 2542 mean_circ: 0.935668
Ran for 134550 frames Cell Events: 2560 mean_circ: 0.935651
Ran for 135050 frames Cell Events: 2570 mean_circ: 0.935657
Ran for 135550 frames Cell Events: 2584 mean_circ: 0.935705
Ran for 136550 frames Cell Events: 2597 mean_circ: 0.935779
Ran for 137550 frames Cell Events: 2619 mean_circ: 0.935754
Ran for 138050 frames Cell Events: 2624 mean_circ: 0.935739
Ran for 138550 frames Cell Events: 2637 mean_circ: 0.935707
Ran for 139050 frames Cell Events: 2644 mean_circ: 0.935734
Ran for 139550 frames Cell Events: 2649 mean_circ: 0.935752
Ran for 140550 frames Cell Events: 2678 mean_circ: 0.935962
Ran for 141050 frames Cell Events: 2689 mean_circ: 0.935975
Ran for 141550 frames Cell Events: 2700 mean_circ: 0.936025
Ran for 142050 frames Cell Events: 2712 mean_circ: 0.935933
Ran for 142550 frames Cell Events: 2718 mean_circ: 0.935911
Ran for 143050 frames Cell Events: 2727 mean_circ: 0.935861
Ran for 143550 frames Cell Events: 2740 mean_circ: 0.935874
Ran for 144050 frames Cell Events: 2756 mean_circ: 0.935789
Ran for 144550 frames Cell Events: 2769 mean_circ: 0.935749
Ran for 145550 frames Cell Events: 2779 mean_circ: 0.93577
Ran for 146050 frames Cell Events: 2782 mean_circ: 0.935779
Ran for 146550 frames Cell Events: 2786 mean_circ: 0.935771
Ran for 147050 frames Cell Events: 2788 mean_circ: 0.935776
Ran for 147550 frames Cell Events: 2801 mean_circ: 0.935794
Ran for 148050 frames Cell Events: 2806 mean_circ: 0.935795
Ran for 148550 frames Cell Events: 2810 mean_circ: 0.93579
Ran for 149050 frames Cell Events: 2818 mean_circ: 0.935779
Ran for 149550 frames Cell Events: 2825 mean_circ: 0.935802
Ran for 150550 frames Cell Events: 2841 mean_circ: 0.935656
Ran for 151050 frames Cell Events: 2849 mean_circ: 0.935663
Ran for 152550 frames Cell Events: 2884 mean_circ: 0.935595
Ran for 153050 frames Cell Events: 2891 mean_circ: 0.935616
Ran for 153550 frames Cell Events: 2897 mean_circ: 0.935648
Ran for 154050 frames Cell Events: 2900 mean_circ: 0.935626
Ran for 155050 frames Cell Events: 2915 mean_circ: 0.935642
Ran for 155550 frames Cell Events: 2921 mean_circ: 0.935577
Ran for 156050 frames Cell Events: 2927 mean_circ: 0.935628
Ran for 156550 frames Cell Events: 2930 mean_circ: 0.935614
Ran for 157550 frames Cell Events: 2947 mean_circ: 0.935591
Ran for 158050 frames Cell Events: 2949 mean_circ: 0.935602
Ran for 158550 frames Cell Events: 2958 mean_circ: 0.935548
Ran for 159050 frames Cell Events: 2968 mean_circ: 0.935558
Ran for 159550 frames Cell Events: 2973 mean_circ: 0.935538
Ran for 160550 frames Cell Events: 3005 mean_circ: 0.935595
Ran for 161550 frames Cell Events: 3022 mean_circ: 0.935543
Ran for 162050 frames Cell Events: 3027 mean_circ: 0.935537
Ran for 162550 frames Cell Events: 3034 mean_circ: 0.935497
Ran for 163050 frames Cell Events: 3052 mean_circ: 0.935619
Ran for 163550 frames Cell Events: 3059 mean_circ: 0.935579
Ran for 164050 frames Cell Events: 3061 mean_circ: 0.935567
Ran for 164550 frames Cell Events: 3068 mean_circ: 0.935518
Ran for 165050 frames Cell Events: 3075 mean_circ: 0.935544
Ran for 165550 frames Cell Events: 3083 mean_circ: 0.935574
Ran for 166050 frames Cell Events: 3095 mean_circ: 0.935554
Ran for 166550 frames Cell Events: 3101 mean_circ: 0.935532
Ran for 167050 frames Cell Events: 3106 mean_circ: 0.935543
Ran for 167550 frames Cell Events: 3115 mean_circ: 0.935504
Ran for 169550 frames Cell Events: 3155 mean_circ: 0.935587
Ran for 170050 frames Cell Events: 3168 mean_circ: 0.935624
Ran for 171050 frames Cell Events: 3198 mean_circ: 0.935744
Ran for 172050 frames Cell Events: 3232 mean_circ: 0.935752
Ran for 173550 frames Cell Events: 3275 mean_circ: 0.935763
Ran for 174050 frames Cell Events: 3280 mean_circ: 0.935774
Ran for 174550 frames Cell Events: 3296 mean_circ: 0.93575
Ran for 176050 frames Cell Events: 3325 mean_circ: 0.935565
Ran for 176550 frames Cell Events: 3332 mean_circ: 0.935533
Ran for 177050 frames Cell Events: 3340 mean_circ: 0.935559
Ran for 178050 frames Cell Events: 3357 mean_circ: 0.935551
Ran for 178550 frames Cell Events: 3363 mean_circ: 0.935563
Ran for 179550 frames Cell Events: 3378 mean_circ: 0.93556
Ran for 180550 frames Cell Events: 3409 mean_circ: 0.935653
Ran for 182550 frames Cell Events: 3447 mean_circ: 0.935596
Ran for 183050 frames Cell Events: 3449 mean_circ: 0.935584
Ran for 183550 frames Cell Events: 3462 mean_circ: 0.935572
Ran for 184550 frames Cell Events: 3489 mean_circ: 0.935636
Ran for 185050 frames Cell Events: 3496 mean_circ: 0.935671
Ran for 186050 frames Cell Events: 3520 mean_circ: 0.935678
Ran for 186550 frames Cell Events: 3534 mean_circ: 0.935536
Ran for 187050 frames Cell Events: 3540 mean_circ: 0.935573
Ran for 187550 frames Cell Events: 3548 mean_circ: 0.935527
Ran for 188050 frames Cell Events: 3556 mean_circ: 0.93554
Ran for 188550 frames Cell Events: 3567 mean_circ: 0.935537
Ran for 190050 frames Cell Events: 3595 mean_circ: 0.935523
Ran for 190550 frames Cell Events: 3601 mean_circ: 0.935519
Ran for 191050 frames Cell Events: 3607 mean_circ: 0.935513
Ran for 191550 frames Cell Events: 3612 mean_circ: 0.935503
Ran for 192050 frames Cell Events: 3623 mean_circ: 0.935511
Ran for 192550 frames Cell Events: 3629 mean_circ: 0.935539
Ran for 194050 frames Cell Events: 3666 mean_circ: 0.935489
Ran for 194550 frames Cell Events: 3675 mean_circ: 0.935561
Ran for 195050 frames Cell Events: 3680 mean_circ: 0.935534
Ran for 195550 frames Cell Events: 3687 mean_circ: 0.935568
Ran for 197050 frames Cell Events: 3723 mean_circ: 0.935555
Ran for 197550 frames Cell Events: 3737 mean_circ: 0.935537
Ran for 199050 frames Cell Events: 3763 mean_circ: 0.935479
Ran for 199550 frames Cell Events: 3782 mean_circ: 0.935488
Ran for 200550 frames Cell Events: 3818 mean_circ: 0.935408
Ran for 201050 frames Cell Events: 3834 mean_circ: 0.935316
Ran for 202050 frames Cell Events: 3868 mean_circ: 0.935283
Ran for 206050 frames Cell Events: 3974 mean_circ: 0.93552
Ran for 207050 frames Cell Events: 3994 mean_circ: 0.935567
Ran for 207550 frames Cell Events: 4003 mean_circ: 0.9356
Ran for 208550 frames Cell Events: 4025 mean_circ: 0.935473
Ran for 209050 frames Cell Events: 4031 mean_circ: 0.93544
Ran for 209550 frames Cell Events: 4045 mean_circ: 0.935437
Ran for 210050 frames Cell Events: 4051 mean_circ: 0.935438
Ran for 211050 frames Cell Events: 4071 mean_circ: 0.935461
Ran for 212050 frames Cell Events: 4098 mean_circ: 0.935532
Ran for 212550 frames Cell Events: 4111 mean_circ: 0.935532
Ran for 213050 frames Cell Events: 4116 mean_circ: 0.935514
Ran for 213550 frames Cell Events: 4120 mean_circ: 0.935534
Ran for 214050 frames Cell Events: 4131 mean_circ: 0.935471
Ran for 214550 frames Cell Events: 4138 mean_circ: 0.935522
Ran for 215050 frames Cell Events: 4146 mean_circ: 0.935436
Ran for 216050 frames Cell Events: 4158 mean_circ: 0.935415
Ran for 217050 frames Cell Events: 4184 mean_circ: 0.935475
Ran for 217550 frames Cell Events: 4189 mean_circ: 0.93549
Ran for 218050 frames Cell Events: 4203 mean_circ: 0.935433
Ran for 218550 frames Cell Events: 4213 mean_circ: 0.9354
Ran for 219550 frames Cell Events: 4237 mean_circ: 0.935453
Ran for 220550 frames Cell Events: 4251 mean_circ: 0.935424
Ran for 221050 frames Cell Events: 4258 mean_circ: 0.935386
Ran for 222550 frames Cell Events: 4290 mean_circ: 0.935334
Ran for 223050 frames Cell Events: 4297 mean_circ: 0.93534
Ran for 224550 frames Cell Events: 4327 mean_circ: 0.93523
Ran for 225050 frames Cell Events: 4329 mean_circ: 0.93523
Ran for 225550 frames Cell Events: 4337 mean_circ: 0.935239
Ran for 226050 frames Cell Events: 4344 mean_circ: 0.935242
Ran for 227050 frames Cell Events: 4366 mean_circ: 0.935259
Ran for 228550 frames Cell Events: 4399 mean_circ: 0.93525
Ran for 229050 frames Cell Events: 4405 mean_circ: 0.935232
Ran for 229550 frames Cell Events: 4410 mean_circ: 0.935244
Ran for 230050 frames Cell Events: 4419 mean_circ: 0.935263
Ran for 230550 frames Cell Events: 4432 mean_circ: 0.93524
Ran for 231050 frames Cell Events: 4436 mean_circ: 0.935229
Ran for 231550 frames Cell Events: 4439 mean_circ: 0.935197
Ran for 232550 frames Cell Events: 4459 mean_circ: 0.935143
Ran for 233050 frames Cell Events: 4469 mean_circ: 0.935037
Ran for 234550 frames Cell Events: 4501 mean_circ: 0.935086
Ran for 235050 frames Cell Events: 4511 mean_circ: 0.935063
Ran for 236550 frames Cell Events: 4546 mean_circ: 0.935199
Ran for 237050 frames Cell Events: 4564 mean_circ: 0.935166
Ran for 238550 frames Cell Events: 4600 mean_circ: 0.935173
Ran for 239550 frames Cell Events: 4625 mean_circ: 0.935201
Ran for 240050 frames Cell Events: 4648 mean_circ: 0.935141
Ran for 240550 frames Cell Events: 4652 mean_circ: 0.935131
Ran for 241050 frames Cell Events: 4655 mean_circ: 0.935128
Ran for 241550 frames Cell Events: 4666 mean_circ: 0.935131
Ran for 242550 frames Cell Events: 4676 mean_circ: 0.935108
Ran for 243050 frames Cell Events: 4682 mean_circ: 0.935124
Ran for 243550 frames Cell Events: 4691 mean_circ: 0.935113
Ran for 244050 frames Cell Events: 4698 mean_circ: 0.935125
Ran for 245550 frames Cell Events: 4724 mean_circ: 0.935054
Ran for 246050 frames Cell Events: 4730 mean_circ: 0.93504
Ran for 246550 frames Cell Events: 4740 mean_circ: 0.935065
Ran for 247050 frames Cell Events: 4749 mean_circ: 0.935103
Ran for 248050 frames Cell Events: 4768 mean_circ: 0.935091
Ran for 250550 frames Cell Events: 4855 mean_circ: 0.93516
Ran for 252050 frames Cell Events: 4890 mean_circ: 0.935146
Ran for 253550 frames Cell Events: 4919 mean_circ: 0.935108
Ran for 254050 frames Cell Events: 4927 mean_circ: 0.935108
Ran for 254550 frames Cell Events: 4937 mean_circ: 0.935116
Ran for 255050 frames Cell Events: 4947 mean_circ: 0.935103
Ran for 256050 frames Cell Events: 4972 mean_circ: 0.93511
Ran for 256550 frames Cell Events: 4980 mean_circ: 0.935029
Ran for 258550 frames Cell Events: 5003 mean_circ: 0.935003
Ran for 259550 frames Cell Events: 5018 mean_circ: 0.935007
Ran for 260050 frames Cell Events: 5023 mean_circ: 0.935019
Ran for 261050 frames Cell Events: 5057 mean_circ: 0.935093
Ran for 261550 frames Cell Events: 5071 mean_circ: 0.935091
Ran for 262550 frames Cell Events: 5097 mean_circ: 0.935148
Ran for 263050 frames Cell Events: 5106 mean_circ: 0.935178
Ran for 263550 frames Cell Events: 5115 mean_circ: 0.935211
Ran for 264050 frames Cell Events: 5120 mean_circ: 0.935194
Ran for 264550 frames Cell Events: 5129 mean_circ: 0.935169
Ran for 265050 frames Cell Events: 5136 mean_circ: 0.935208
Ran for 265550 frames Cell Events: 5142 mean_circ: 0.935219
Ran for 266050 frames Cell Events: 5148 mean_circ: 0.935212
Ran for 267050 frames Cell Events: 5159 mean_circ: 0.935227
Ran for 267550 frames Cell Events: 5173 mean_circ: 0.935205
Ran for 268050 frames Cell Events: 5189 mean_circ: 0.935203
Ran for 268550 frames Cell Events: 5196 mean_circ: 0.935211
Ran for 269050 frames Cell Events: 5207 mean_circ: 0.935235
Ran for 269550 frames Cell Events: 5217 mean_circ: 0.935194
Ran for 270050 frames Cell Events: 5224 mean_circ: 0.935202
Ran for 272550 frames Cell Events: 5284 mean_circ: 0.935065
Ran for 273050 frames Cell Events: 5288 mean_circ: 0.935001
Ran for 273550 frames Cell Events: 5299 mean_circ: 0.934962
Ran for 274050 frames Cell Events: 5308 mean_circ: 0.934976
Ran for 275050 frames Cell Events: 5337 mean_circ: 0.934979
Ran for 276050 frames Cell Events: 5363 mean_circ: 0.934973
Ran for 277050 frames Cell Events: 5395 mean_circ: 0.934878
Ran for 277550 frames Cell Events: 5408 mean_circ: 0.934893
Ran for 278050 frames Cell Events: 5419 mean_circ: 0.934801
Ran for 278550 frames Cell Events: 5431 mean_circ: 0.934829
Ran for 280050 frames Cell Events: 5462 mean_circ: 0.934814
Ran for 280550 frames Cell Events: 5472 mean_circ: 0.934801
Ran for 281050 frames Cell Events: 5481 mean_circ: 0.93478
Ran for 281550 frames Cell Events: 5492 mean_circ: 0.934776
Ran for 282550 frames Cell Events: 5518 mean_circ: 0.934752
Ran for 283050 frames Cell Events: 5528 mean_circ: 0.934765
Ran for 283550 frames Cell Events: 5546 mean_circ: 0.93483
Ran for 284050 frames Cell Events: 5563 mean_circ: 0.934825
Ran for 284550 frames Cell Events: 5569 mean_circ: 0.93483
Ran for 285050 frames Cell Events: 5571 mean_circ: 0.934835
Ran for 285550 frames Cell Events: 5585 mean_circ: 0.934818
Ran for 286050 frames Cell Events: 5599 mean_circ: 0.9348
Ran for 286550 frames Cell Events: 5607 mean_circ: 0.934815
Ran for 287550 frames Cell Events: 5637 mean_circ: 0.934802
Ran for 288050 frames Cell Events: 5647 mean_circ: 0.934743
Ran for 288550 frames Cell Events: 5656 mean_circ: 0.934744
Ran for 289050 frames Cell Events: 5665 mean_circ: 0.934755
Ran for 290550 frames Cell Events: 5704 mean_circ: 0.934736
Ran for 291050 frames Cell Events: 5714 mean_circ: 0.934717
Ran for 293050 frames Cell Events: 5756 mean_circ: 0.934728
Ran for 293550 frames Cell Events: 5770 mean_circ: 0.934754
Ran for 294050 frames Cell Events: 5783 mean_circ: 0.934776
Ran for 294550 frames Cell Events: 5789 mean_circ: 0.934799
Ran for 296050 frames Cell Events: 5810 mean_circ: 0.934799
Ran for 297050 frames Cell Events: 5837 mean_circ: 0.934737
Ran for 297550 frames Cell Events: 5855 mean_circ: 0.9347
Ran for 299050 frames Cell Events: 5891 mean_circ: 0.934783
Ran for 299550 frames Cell Events: 5907 mean_circ: 0.934803
Ran for 300050 frames Cell Events: 5919 mean_circ: 0.934805
Ran for 300550 frames Cell Events: 5929 mean_circ: 0.934797
Ran for 301050 frames Cell Events: 5944 mean_circ: 0.934834
Ran for 301550 frames Cell Events: 5952 mean_circ: 0.934837
Ran for 302050 frames Cell Events: 5963 mean_circ: 0.934839
Ran for 302550 frames Cell Events: 5972 mean_circ: 0.93484
Ran for 303550 frames Cell Events: 5994 mean_circ: 0.934911
Ran for 304050 frames Cell Events: 6004 mean_circ: 0.934885
Ran for 306050 frames Cell Events: 6046 mean_circ: 0.934796
Ran for 306550 frames Cell Events: 6053 mean_circ: 0.934792
Ran for 307050 frames Cell Events: 6058 mean_circ: 0.934793
Ran for 307550 frames Cell Events: 6071 mean_circ: 0.934724
Ran for 308050 frames Cell Events: 6083 mean_circ: 0.934693
Ran for 308550 frames Cell Events: 6097 mean_circ: 0.934666
Ran for 309050 frames Cell Events: 6105 mean_circ: 0.93467
Ran for 309550 frames Cell Events: 6110 mean_circ: 0.934657
Ran for 310550 frames Cell Events: 6134 mean_circ: 0.934584
Ran for 311050 frames Cell Events: 6143 mean_circ: 0.934597
Ran for 311550 frames Cell Events: 6156 mean_circ: 0.934593
Ran for 312050 frames Cell Events: 6168 mean_circ: 0.934627
Ran for 312550 frames Cell Events: 6180 mean_circ: 0.934644
Ran for 313550 frames Cell Events: 6199 mean_circ: 0.934612
Ran for 314050 frames Cell Events: 6211 mean_circ: 0.934592
Ran for 315050 frames Cell Events: 6232 mean_circ: 0.934661
Ran for 315550 frames Cell Events: 6241 mean_circ: 0.934651
Ran for 316050 frames Cell Events: 6251 mean_circ: 0.934639
Ran for 316550 frames Cell Events: 6265 mean_circ: 0.934652
Ran for 317550 frames Cell Events: 6290 mean_circ: 0.934619
Ran for 318050 frames Cell Events: 6298 mean_circ: 0.934627
Ran for 319050 frames Cell Events: 6332 mean_circ: 0.93464
Ran for 319550 frames Cell Events: 6345 mean_circ: 0.934637
Ran for 320050 frames Cell Events: 6352 mean_circ: 0.934624
Ran for 320550 frames Cell Events: 6359 mean_circ: 0.934632
Ran for 322550 frames Cell Events: 6390 mean_circ: 0.934624
Ran for 323050 frames Cell Events: 6407 mean_circ: 0.934625
Ran for 324050 frames Cell Events: 6424 mean_circ: 0.934628
Ran for 325050 frames Cell Events: 6450 mean_circ: 0.934557
Ran for 325550 frames Cell Events: 6459 mean_circ: 0.934499
Ran for 326050 frames Cell Events: 6472 mean_circ: 0.934534
Ran for 326550 frames Cell Events: 6483 mean_circ: 0.934553
Ran for 327050 frames Cell Events: 6492 mean_circ: 0.934546
Ran for 327550 frames Cell Events: 6516 mean_circ: 0.934562
Ran for 328050 frames Cell Events: 6526 mean_circ: 0.934594
Ran for 329050 frames Cell Events: 6562 mean_circ: 0.934556
Ran for 331050 frames Cell Events: 6594 mean_circ: 0.934543
Ran for 331550 frames Cell Events: 6599 mean_circ: 0.934517
Ran for 332050 frames Cell Events: 6609 mean_circ: 0.934484
Ran for 333550 frames Cell Events: 6637 mean_circ: 0.934448
Ran for 334050 frames Cell Events: 6656 mean_circ: 0.93445
Ran for 335050 frames Cell Events: 6666 mean_circ: 0.934423
Ran for 335550 frames Cell Events: 6683 mean_circ: 0.934445
Ran for 336550 frames Cell Events: 6710 mean_circ: 0.934452
Ran for 337550 frames Cell Events: 6727 mean_circ: 0.934462
Ran for 338050 frames Cell Events: 6744 mean_circ: 0.934431
Ran for 338550 frames Cell Events: 6749 mean_circ: 0.934418
Ran for 339050 frames Cell Events: 6758 mean_circ: 0.934423
Ran for 339550 frames Cell Events: 6773 mean_circ: 0.93446
End this measurment..
Stopping time: 4.04661e+008
****************************************
Measurement finished
Mean Circularitiy: 0.934489
Mean Area: 788.328
Mean FL-1 intensity: 8961.79
Mean FL-2 intensity: 10104.6
Mean FL-3 intensity: 0
frames processed: 339311
Total Time: 170039ms
Number of Runs (new bg img) 0
Frames collected: 339888
Skipped frames: 16843
Rescued Frames: 2170307
Samples DAQ: 84972017
Samples written: 169943954
Samples per Channel: 84971977
FPS: 1998.88
Samples per second: 499721
Expected samples/s: 500000
Events: 6778
Events per second: 39.8615
jumped back (PMT): 4439
#Frames read, frequency
# 0 frames :475568
# 1 frames :183224
# 2 frames :4704
# 3 frames :2953
# 4 frames :1760
# 5 frames :1195
# 6 frames :727
# 7 frames :1106
# 8 frames :1153
# 9 frames :994
# 10 frames :869
# 11 frames :879
# 12 frames :895
# 13 frames :745
# 14 frames :510
# 15 frames :395
# 16 frames :305
# 17 frames :312
# 18 frames :294
# 19 frames :204
# 20 frames :181
# 21 frames :145
# 22 frames :135
# 23 frames :98
# 24 frames :71
# 25 frames :57
# 26 frames :39
# 27 frames :33
# 28 frames :32
# 29 frames :19
# 30 frames :15
# 31 frames :18
# 32 frames :14
# 33 frames :10
# 34 frames :11
# 35 frames :12
# 36 frames :10
# 37 frames :9
# 38 frames :4
# 39 frames :11
# 40 frames :3
# 41 frames :4
# 42 frames :2
# 43 frames :3
# 44 frames :1
# 45 frames :3
# 47 frames :5
# 48 frames :2
# 49 frames :1
# 50 frames :1
# 51 frames :1
# 53 frames :1
# 54 frames :1
# 56 frames :1
# 62 frames :1
# 66 frames :1
# 70 frames :1
# 81 frames :1
# 84 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9754
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0