Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_19.19.21
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "6eff119808e4f4fedec87b9174715c33",
"name": "M1_20170619_1550_dsRNA_U3_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:19:44"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8956 (max 8957) in '8956'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.0525
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 4.77548e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 24 mean_circ: 0.897559
Ran for 1050 frames Cell Events: 37 mean_circ: 0.886444
Ran for 1550 frames Cell Events: 56 mean_circ: 0.897301
Ran for 2050 frames Cell Events: 74 mean_circ: 0.897264
Ran for 2550 frames Cell Events: 84 mean_circ: 0.895385
Ran for 3550 frames Cell Events: 113 mean_circ: 0.9025
Ran for 4050 frames Cell Events: 128 mean_circ: 0.901365
Ran for 4550 frames Cell Events: 145 mean_circ: 0.901523
Ran for 5050 frames Cell Events: 158 mean_circ: 0.903033
Ran for 6550 frames Cell Events: 201 mean_circ: 0.903306
Ran for 7050 frames Cell Events: 211 mean_circ: 0.903956
Ran for 7550 frames Cell Events: 223 mean_circ: 0.902834
Ran for 9050 frames Cell Events: 282 mean_circ: 0.90587
Ran for 9550 frames Cell Events: 294 mean_circ: 0.905303
Ran for 10550 frames Cell Events: 332 mean_circ: 0.904371
Ran for 11050 frames Cell Events: 346 mean_circ: 0.90501
Ran for 12050 frames Cell Events: 371 mean_circ: 0.904319
Ran for 12550 frames Cell Events: 384 mean_circ: 0.904298
Ran for 13050 frames Cell Events: 399 mean_circ: 0.904434
Ran for 13550 frames Cell Events: 417 mean_circ: 0.905121
Ran for 14050 frames Cell Events: 435 mean_circ: 0.905719
Ran for 14550 frames Cell Events: 447 mean_circ: 0.905511
Ran for 15050 frames Cell Events: 462 mean_circ: 0.905534
Ran for 15550 frames Cell Events: 476 mean_circ: 0.906119
Ran for 16050 frames Cell Events: 496 mean_circ: 0.905854
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Ran for 20550 frames Cell Events: 638 mean_circ: 0.907884
Ran for 21050 frames Cell Events: 649 mean_circ: 0.908274
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Ran for 22550 frames Cell Events: 701 mean_circ: 0.90838
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Ran for 23550 frames Cell Events: 726 mean_circ: 0.908317
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Ran for 29550 frames Cell Events: 921 mean_circ: 0.908556
Ran for 30550 frames Cell Events: 952 mean_circ: 0.908641
Ran for 31550 frames Cell Events: 983 mean_circ: 0.908793
Ran for 32050 frames Cell Events: 999 mean_circ: 0.908796
Ran for 32550 frames Cell Events: 1010 mean_circ: 0.909015
Ran for 33050 frames Cell Events: 1020 mean_circ: 0.908934
Ran for 34050 frames Cell Events: 1053 mean_circ: 0.908403
Ran for 35550 frames Cell Events: 1089 mean_circ: 0.908525
Ran for 36050 frames Cell Events: 1112 mean_circ: 0.908527
Ran for 37050 frames Cell Events: 1146 mean_circ: 0.90776
Ran for 37550 frames Cell Events: 1163 mean_circ: 0.907772
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Ran for 39050 frames Cell Events: 1210 mean_circ: 0.907603
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Ran for 40050 frames Cell Events: 1235 mean_circ: 0.907573
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Ran for 43550 frames Cell Events: 1318 mean_circ: 0.908631
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Ran for 55050 frames Cell Events: 1620 mean_circ: 0.907833
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Ran for 57050 frames Cell Events: 1673 mean_circ: 0.907931
Ran for 57550 frames Cell Events: 1685 mean_circ: 0.908075
Ran for 58550 frames Cell Events: 1721 mean_circ: 0.908445
Ran for 59550 frames Cell Events: 1756 mean_circ: 0.908072
Ran for 60050 frames Cell Events: 1766 mean_circ: 0.908046
Ran for 60550 frames Cell Events: 1774 mean_circ: 0.907917
Ran for 61050 frames Cell Events: 1792 mean_circ: 0.907917
Ran for 61550 frames Cell Events: 1810 mean_circ: 0.907946
Ran for 63050 frames Cell Events: 1852 mean_circ: 0.908235
Ran for 64050 frames Cell Events: 1875 mean_circ: 0.908307
Ran for 64550 frames Cell Events: 1890 mean_circ: 0.908334
Ran for 65050 frames Cell Events: 1901 mean_circ: 0.908127
Ran for 65550 frames Cell Events: 1920 mean_circ: 0.908243
Ran for 66050 frames Cell Events: 1936 mean_circ: 0.908381
Ran for 66550 frames Cell Events: 1950 mean_circ: 0.908364
Ran for 67050 frames Cell Events: 1958 mean_circ: 0.908512
Ran for 67550 frames Cell Events: 1966 mean_circ: 0.908518
Ran for 68050 frames Cell Events: 1972 mean_circ: 0.908469
Ran for 68550 frames Cell Events: 1983 mean_circ: 0.908499
Ran for 69050 frames Cell Events: 1998 mean_circ: 0.908253
Ran for 70550 frames Cell Events: 2049 mean_circ: 0.908162
Ran for 71050 frames Cell Events: 2060 mean_circ: 0.908184
Ran for 71550 frames Cell Events: 2069 mean_circ: 0.908131
Ran for 72050 frames Cell Events: 2084 mean_circ: 0.908072
Ran for 72550 frames Cell Events: 2101 mean_circ: 0.908176
Ran for 73050 frames Cell Events: 2118 mean_circ: 0.908201
Ran for 74050 frames Cell Events: 2144 mean_circ: 0.908415
Ran for 74550 frames Cell Events: 2161 mean_circ: 0.908413
Ran for 75050 frames Cell Events: 2175 mean_circ: 0.908355
Ran for 75550 frames Cell Events: 2188 mean_circ: 0.908253
Ran for 76050 frames Cell Events: 2192 mean_circ: 0.908241
Ran for 77050 frames Cell Events: 2220 mean_circ: 0.908252
Ran for 78050 frames Cell Events: 2255 mean_circ: 0.908025
Ran for 78550 frames Cell Events: 2268 mean_circ: 0.907955
Ran for 79050 frames Cell Events: 2286 mean_circ: 0.908006
Ran for 79550 frames Cell Events: 2309 mean_circ: 0.908085
Ran for 80550 frames Cell Events: 2345 mean_circ: 0.908298
Ran for 81050 frames Cell Events: 2356 mean_circ: 0.908292
Ran for 81550 frames Cell Events: 2368 mean_circ: 0.908334
Ran for 82550 frames Cell Events: 2402 mean_circ: 0.908427
Ran for 83050 frames Cell Events: 2415 mean_circ: 0.90849
Ran for 83550 frames Cell Events: 2428 mean_circ: 0.908452
Ran for 85050 frames Cell Events: 2471 mean_circ: 0.908251
Ran for 85550 frames Cell Events: 2482 mean_circ: 0.908164
Ran for 86050 frames Cell Events: 2494 mean_circ: 0.908115
Ran for 86550 frames Cell Events: 2505 mean_circ: 0.908082
Ran for 87050 frames Cell Events: 2517 mean_circ: 0.90803
Ran for 87550 frames Cell Events: 2530 mean_circ: 0.907955
Ran for 88050 frames Cell Events: 2549 mean_circ: 0.907858
Ran for 88550 frames Cell Events: 2559 mean_circ: 0.9079
Ran for 89050 frames Cell Events: 2574 mean_circ: 0.907697
Ran for 89550 frames Cell Events: 2584 mean_circ: 0.907484
Ran for 90050 frames Cell Events: 2598 mean_circ: 0.907555
Ran for 90550 frames Cell Events: 2607 mean_circ: 0.907477
Ran for 91050 frames Cell Events: 2622 mean_circ: 0.907552
Ran for 92050 frames Cell Events: 2655 mean_circ: 0.907444
Ran for 92550 frames Cell Events: 2670 mean_circ: 0.907494
Ran for 93050 frames Cell Events: 2693 mean_circ: 0.907412
Ran for 93550 frames Cell Events: 2704 mean_circ: 0.907397
Ran for 94050 frames Cell Events: 2718 mean_circ: 0.907407
Ran for 94550 frames Cell Events: 2734 mean_circ: 0.907357
Ran for 95050 frames Cell Events: 2749 mean_circ: 0.907411
Ran for 96050 frames Cell Events: 2767 mean_circ: 0.90742
Ran for 96550 frames Cell Events: 2785 mean_circ: 0.907435
Ran for 97050 frames Cell Events: 2799 mean_circ: 0.907454
Ran for 97550 frames Cell Events: 2810 mean_circ: 0.907328
Ran for 98050 frames Cell Events: 2823 mean_circ: 0.907402
Ran for 99050 frames Cell Events: 2837 mean_circ: 0.907428
Ran for 99550 frames Cell Events: 2846 mean_circ: 0.907347
Ran for 101550 frames Cell Events: 2882 mean_circ: 0.907172
Ran for 102550 frames Cell Events: 2909 mean_circ: 0.907027
Ran for 103050 frames Cell Events: 2923 mean_circ: 0.906928
Ran for 103550 frames Cell Events: 2933 mean_circ: 0.906991
Ran for 104050 frames Cell Events: 2943 mean_circ: 0.906994
Ran for 104550 frames Cell Events: 2955 mean_circ: 0.906963
Ran for 105050 frames Cell Events: 2976 mean_circ: 0.906833
Ran for 106050 frames Cell Events: 3002 mean_circ: 0.906824
Ran for 106550 frames Cell Events: 3030 mean_circ: 0.906827
Ran for 107050 frames Cell Events: 3040 mean_circ: 0.906804
Ran for 107550 frames Cell Events: 3054 mean_circ: 0.906814
Ran for 108050 frames Cell Events: 3072 mean_circ: 0.90685
Ran for 108550 frames Cell Events: 3077 mean_circ: 0.906739
Ran for 110050 frames Cell Events: 3127 mean_circ: 0.906437
Ran for 110550 frames Cell Events: 3150 mean_circ: 0.906435
Ran for 111050 frames Cell Events: 3161 mean_circ: 0.906578
Ran for 111550 frames Cell Events: 3185 mean_circ: 0.906546
Ran for 112050 frames Cell Events: 3198 mean_circ: 0.906457
Ran for 112550 frames Cell Events: 3208 mean_circ: 0.906521
Ran for 113050 frames Cell Events: 3224 mean_circ: 0.906551
Ran for 114050 frames Cell Events: 3242 mean_circ: 0.906482
Ran for 114550 frames Cell Events: 3258 mean_circ: 0.906539
Ran for 115050 frames Cell Events: 3273 mean_circ: 0.906574
Ran for 115550 frames Cell Events: 3294 mean_circ: 0.906688
Ran for 116550 frames Cell Events: 3319 mean_circ: 0.906732
Ran for 117550 frames Cell Events: 3341 mean_circ: 0.906848
Ran for 118050 frames Cell Events: 3358 mean_circ: 0.906801
Ran for 119050 frames Cell Events: 3388 mean_circ: 0.906631
Ran for 119550 frames Cell Events: 3400 mean_circ: 0.906576
Ran for 120050 frames Cell Events: 3413 mean_circ: 0.906521
Ran for 120550 frames Cell Events: 3421 mean_circ: 0.906542
Ran for 121050 frames Cell Events: 3437 mean_circ: 0.906608
Ran for 121550 frames Cell Events: 3445 mean_circ: 0.906621
Ran for 122550 frames Cell Events: 3470 mean_circ: 0.906624
Ran for 123050 frames Cell Events: 3482 mean_circ: 0.9067
Ran for 124050 frames Cell Events: 3512 mean_circ: 0.90667
Ran for 124550 frames Cell Events: 3520 mean_circ: 0.906513
Ran for 125050 frames Cell Events: 3534 mean_circ: 0.906531
Ran for 125550 frames Cell Events: 3544 mean_circ: 0.906499
Ran for 126050 frames Cell Events: 3551 mean_circ: 0.906415
Ran for 127050 frames Cell Events: 3567 mean_circ: 0.906329
Ran for 128050 frames Cell Events: 3585 mean_circ: 0.906371
Ran for 129050 frames Cell Events: 3608 mean_circ: 0.906447
Ran for 129550 frames Cell Events: 3622 mean_circ: 0.906311
Ran for 130050 frames Cell Events: 3629 mean_circ: 0.906258
Ran for 130550 frames Cell Events: 3643 mean_circ: 0.906291
Ran for 131050 frames Cell Events: 3661 mean_circ: 0.906309
Ran for 131550 frames Cell Events: 3674 mean_circ: 0.906194
Ran for 132050 frames Cell Events: 3687 mean_circ: 0.906124
Ran for 132550 frames Cell Events: 3700 mean_circ: 0.906131
Ran for 133550 frames Cell Events: 3722 mean_circ: 0.906035
Ran for 134050 frames Cell Events: 3737 mean_circ: 0.905923
Ran for 135050 frames Cell Events: 3774 mean_circ: 0.906014
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Ran for 138050 frames Cell Events: 3865 mean_circ: 0.906261
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Ran for 141050 frames Cell Events: 3945 mean_circ: 0.906092
Ran for 141550 frames Cell Events: 3958 mean_circ: 0.905947
Ran for 142050 frames Cell Events: 3967 mean_circ: 0.905935
Ran for 143050 frames Cell Events: 3988 mean_circ: 0.906041
Ran for 144050 frames Cell Events: 4018 mean_circ: 0.906035
Ran for 144550 frames Cell Events: 4037 mean_circ: 0.906063
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Ran for 148050 frames Cell Events: 4124 mean_circ: 0.906179
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Ran for 152550 frames Cell Events: 4235 mean_circ: 0.906292
Ran for 153050 frames Cell Events: 4239 mean_circ: 0.906303
Ran for 153550 frames Cell Events: 4250 mean_circ: 0.906312
Ran for 154050 frames Cell Events: 4258 mean_circ: 0.906254
Ran for 154550 frames Cell Events: 4273 mean_circ: 0.906243
Ran for 155550 frames Cell Events: 4310 mean_circ: 0.90611
Ran for 156050 frames Cell Events: 4321 mean_circ: 0.906089
Ran for 156550 frames Cell Events: 4334 mean_circ: 0.906105
Ran for 157050 frames Cell Events: 4344 mean_circ: 0.906057
Ran for 157550 frames Cell Events: 4359 mean_circ: 0.906114
Ran for 158050 frames Cell Events: 4379 mean_circ: 0.906085
Ran for 158550 frames Cell Events: 4388 mean_circ: 0.906077
Ran for 159050 frames Cell Events: 4400 mean_circ: 0.906119
Ran for 160050 frames Cell Events: 4432 mean_circ: 0.906103
Ran for 160550 frames Cell Events: 4446 mean_circ: 0.906182
Ran for 161550 frames Cell Events: 4483 mean_circ: 0.906341
Ran for 163050 frames Cell Events: 4523 mean_circ: 0.906439
Ran for 163550 frames Cell Events: 4537 mean_circ: 0.906481
Ran for 165050 frames Cell Events: 4583 mean_circ: 0.906452
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Ran for 166050 frames Cell Events: 4611 mean_circ: 0.906531
Ran for 166550 frames Cell Events: 4630 mean_circ: 0.906483
Ran for 167550 frames Cell Events: 4657 mean_circ: 0.906506
Ran for 168050 frames Cell Events: 4676 mean_circ: 0.906469
Ran for 168550 frames Cell Events: 4703 mean_circ: 0.906434
Ran for 169050 frames Cell Events: 4715 mean_circ: 0.906425
Ran for 169550 frames Cell Events: 4736 mean_circ: 0.906473
Ran for 170050 frames Cell Events: 4760 mean_circ: 0.906425
Ran for 170550 frames Cell Events: 4774 mean_circ: 0.906439
Ran for 171050 frames Cell Events: 4791 mean_circ: 0.906441
Ran for 171550 frames Cell Events: 4800 mean_circ: 0.906511
Ran for 172050 frames Cell Events: 4814 mean_circ: 0.906463
Ran for 172550 frames Cell Events: 4827 mean_circ: 0.906526
Ran for 173550 frames Cell Events: 4856 mean_circ: 0.906563
Ran for 174050 frames Cell Events: 4879 mean_circ: 0.906615
Ran for 174550 frames Cell Events: 4895 mean_circ: 0.906616
Ran for 175550 frames Cell Events: 4924 mean_circ: 0.906719
Ran for 176550 frames Cell Events: 4963 mean_circ: 0.906718
Ran for 177050 frames Cell Events: 4977 mean_circ: 0.906706
Ran for 177550 frames Cell Events: 4989 mean_circ: 0.906729
Ran for 178050 frames Cell Events: 5004 mean_circ: 0.906782
Ran for 178550 frames Cell Events: 5011 mean_circ: 0.906812
Ran for 179050 frames Cell Events: 5027 mean_circ: 0.90673
Ran for 179550 frames Cell Events: 5031 mean_circ: 0.906712
Ran for 180050 frames Cell Events: 5045 mean_circ: 0.906741
Ran for 180550 frames Cell Events: 5057 mean_circ: 0.906644
Ran for 181550 frames Cell Events: 5089 mean_circ: 0.906738
Ran for 183050 frames Cell Events: 5129 mean_circ: 0.90672
Ran for 183550 frames Cell Events: 5151 mean_circ: 0.906696
Ran for 184050 frames Cell Events: 5162 mean_circ: 0.906656
Ran for 184550 frames Cell Events: 5166 mean_circ: 0.906637
Ran for 185050 frames Cell Events: 5179 mean_circ: 0.906618
Ran for 185550 frames Cell Events: 5192 mean_circ: 0.906589
Ran for 186050 frames Cell Events: 5206 mean_circ: 0.906541
Ran for 187050 frames Cell Events: 5233 mean_circ: 0.906611
Ran for 188050 frames Cell Events: 5258 mean_circ: 0.906531
Ran for 188550 frames Cell Events: 5267 mean_circ: 0.906514
Ran for 189050 frames Cell Events: 5286 mean_circ: 0.906533
Ran for 190050 frames Cell Events: 5319 mean_circ: 0.906532
Ran for 191550 frames Cell Events: 5362 mean_circ: 0.906593
Ran for 192050 frames Cell Events: 5373 mean_circ: 0.906568
Ran for 192550 frames Cell Events: 5386 mean_circ: 0.906542
Ran for 193050 frames Cell Events: 5396 mean_circ: 0.906575
Ran for 194550 frames Cell Events: 5442 mean_circ: 0.906534
Ran for 195050 frames Cell Events: 5461 mean_circ: 0.906478
Ran for 195550 frames Cell Events: 5480 mean_circ: 0.906449
Ran for 196050 frames Cell Events: 5488 mean_circ: 0.906461
Ran for 196550 frames Cell Events: 5495 mean_circ: 0.90643
Ran for 197550 frames Cell Events: 5536 mean_circ: 0.906408
Ran for 198050 frames Cell Events: 5552 mean_circ: 0.906389
Ran for 198550 frames Cell Events: 5559 mean_circ: 0.906414
Ran for 199050 frames Cell Events: 5572 mean_circ: 0.906417
Ran for 199550 frames Cell Events: 5579 mean_circ: 0.906405
Ran for 200050 frames Cell Events: 5589 mean_circ: 0.906366
Ran for 200550 frames Cell Events: 5596 mean_circ: 0.906364
Ran for 201550 frames Cell Events: 5616 mean_circ: 0.906303
Ran for 202550 frames Cell Events: 5649 mean_circ: 0.906146
Ran for 203050 frames Cell Events: 5666 mean_circ: 0.90621
Ran for 203550 frames Cell Events: 5680 mean_circ: 0.906195
Ran for 204050 frames Cell Events: 5693 mean_circ: 0.906217
Ran for 204550 frames Cell Events: 5705 mean_circ: 0.906257
Ran for 205550 frames Cell Events: 5736 mean_circ: 0.906303
Ran for 207050 frames Cell Events: 5780 mean_circ: 0.906238
Ran for 207550 frames Cell Events: 5804 mean_circ: 0.906158
Ran for 208050 frames Cell Events: 5820 mean_circ: 0.906121
Ran for 208550 frames Cell Events: 5842 mean_circ: 0.906134
Ran for 209550 frames Cell Events: 5867 mean_circ: 0.906165
Ran for 210050 frames Cell Events: 5874 mean_circ: 0.906192
Ran for 210550 frames Cell Events: 5888 mean_circ: 0.906195
Ran for 211050 frames Cell Events: 5920 mean_circ: 0.906214
Ran for 212050 frames Cell Events: 5942 mean_circ: 0.906197
Ran for 212550 frames Cell Events: 5959 mean_circ: 0.906226
Ran for 213050 frames Cell Events: 5978 mean_circ: 0.906252
Ran for 213550 frames Cell Events: 5992 mean_circ: 0.906222
Ran for 215050 frames Cell Events: 6049 mean_circ: 0.906216
Ran for 215550 frames Cell Events: 6068 mean_circ: 0.906175
Ran for 216050 frames Cell Events: 6086 mean_circ: 0.906172
Ran for 216550 frames Cell Events: 6101 mean_circ: 0.906235
Ran for 217050 frames Cell Events: 6114 mean_circ: 0.906231
Ran for 217550 frames Cell Events: 6130 mean_circ: 0.906254
Ran for 218550 frames Cell Events: 6157 mean_circ: 0.90623
Ran for 219050 frames Cell Events: 6168 mean_circ: 0.906206
Ran for 219550 frames Cell Events: 6178 mean_circ: 0.906215
Ran for 220050 frames Cell Events: 6190 mean_circ: 0.906207
Ran for 220550 frames Cell Events: 6204 mean_circ: 0.906183
Ran for 221050 frames Cell Events: 6212 mean_circ: 0.906171
Ran for 221550 frames Cell Events: 6228 mean_circ: 0.906171
Ran for 222050 frames Cell Events: 6241 mean_circ: 0.906136
Ran for 222550 frames Cell Events: 6257 mean_circ: 0.906089
Ran for 223050 frames Cell Events: 6278 mean_circ: 0.906052
Ran for 223550 frames Cell Events: 6294 mean_circ: 0.906045
Ran for 224050 frames Cell Events: 6309 mean_circ: 0.90605
Ran for 224550 frames Cell Events: 6334 mean_circ: 0.906026
Ran for 225050 frames Cell Events: 6348 mean_circ: 0.906029
Ran for 226050 frames Cell Events: 6384 mean_circ: 0.906066
Ran for 226550 frames Cell Events: 6401 mean_circ: 0.905982
Ran for 227050 frames Cell Events: 6408 mean_circ: 0.905984
Ran for 228050 frames Cell Events: 6435 mean_circ: 0.905946
Ran for 228550 frames Cell Events: 6450 mean_circ: 0.905905
Ran for 229050 frames Cell Events: 6458 mean_circ: 0.905901
Ran for 229550 frames Cell Events: 6476 mean_circ: 0.90587
Ran for 230050 frames Cell Events: 6497 mean_circ: 0.905887
Ran for 230550 frames Cell Events: 6508 mean_circ: 0.905877
Ran for 231050 frames Cell Events: 6537 mean_circ: 0.905893
Ran for 231550 frames Cell Events: 6555 mean_circ: 0.90587
Ran for 232550 frames Cell Events: 6578 mean_circ: 0.905844
Ran for 233050 frames Cell Events: 6588 mean_circ: 0.905857
Ran for 234050 frames Cell Events: 6621 mean_circ: 0.905959
Ran for 234550 frames Cell Events: 6631 mean_circ: 0.90592
Ran for 235050 frames Cell Events: 6640 mean_circ: 0.905928
Ran for 235550 frames Cell Events: 6648 mean_circ: 0.90591
Ran for 236050 frames Cell Events: 6671 mean_circ: 0.905928
Ran for 236550 frames Cell Events: 6686 mean_circ: 0.905903
Ran for 237050 frames Cell Events: 6697 mean_circ: 0.905874
Ran for 237550 frames Cell Events: 6712 mean_circ: 0.905798
Ran for 238050 frames Cell Events: 6729 mean_circ: 0.905884
Ran for 239050 frames Cell Events: 6756 mean_circ: 0.905908
Ran for 240050 frames Cell Events: 6773 mean_circ: 0.905878
Ran for 240550 frames Cell Events: 6784 mean_circ: 0.905883
Ran for 241050 frames Cell Events: 6798 mean_circ: 0.905857
Ran for 241550 frames Cell Events: 6823 mean_circ: 0.905903
Ran for 242050 frames Cell Events: 6835 mean_circ: 0.905877
Ran for 242550 frames Cell Events: 6840 mean_circ: 0.905872
Ran for 243050 frames Cell Events: 6858 mean_circ: 0.905896
Ran for 243550 frames Cell Events: 6872 mean_circ: 0.905865
Ran for 244550 frames Cell Events: 6911 mean_circ: 0.905796
Ran for 245050 frames Cell Events: 6931 mean_circ: 0.905782
Ran for 246050 frames Cell Events: 6966 mean_circ: 0.905752
Ran for 246550 frames Cell Events: 6981 mean_circ: 0.905751
Ran for 247050 frames Cell Events: 6995 mean_circ: 0.905733
Ran for 248050 frames Cell Events: 7017 mean_circ: 0.905789
Ran for 248550 frames Cell Events: 7035 mean_circ: 0.905789
Ran for 249050 frames Cell Events: 7049 mean_circ: 0.905763
Ran for 249550 frames Cell Events: 7059 mean_circ: 0.905716
Ran for 250050 frames Cell Events: 7064 mean_circ: 0.905705
Ran for 251050 frames Cell Events: 7089 mean_circ: 0.905748
Ran for 251550 frames Cell Events: 7104 mean_circ: 0.905754
Ran for 252050 frames Cell Events: 7121 mean_circ: 0.905744
Ran for 252550 frames Cell Events: 7135 mean_circ: 0.905763
Ran for 253050 frames Cell Events: 7154 mean_circ: 0.905683
Ran for 254550 frames Cell Events: 7197 mean_circ: 0.905737
Ran for 255050 frames Cell Events: 7213 mean_circ: 0.905754
Ran for 255550 frames Cell Events: 7225 mean_circ: 0.905749
Ran for 256050 frames Cell Events: 7243 mean_circ: 0.90579
Ran for 256550 frames Cell Events: 7252 mean_circ: 0.905788
Ran for 257050 frames Cell Events: 7272 mean_circ: 0.905772
Ran for 257550 frames Cell Events: 7281 mean_circ: 0.905788
Ran for 258050 frames Cell Events: 7285 mean_circ: 0.905806
Ran for 258550 frames Cell Events: 7297 mean_circ: 0.905848
Ran for 259050 frames Cell Events: 7313 mean_circ: 0.905873
Ran for 259550 frames Cell Events: 7329 mean_circ: 0.905907
Ran for 260050 frames Cell Events: 7346 mean_circ: 0.905918
Ran for 260550 frames Cell Events: 7358 mean_circ: 0.90593
Ran for 261050 frames Cell Events: 7371 mean_circ: 0.90588
Ran for 262050 frames Cell Events: 7400 mean_circ: 0.905846
Ran for 262550 frames Cell Events: 7408 mean_circ: 0.905893
Ran for 264550 frames Cell Events: 7473 mean_circ: 0.905848
Ran for 265050 frames Cell Events: 7489 mean_circ: 0.905802
Ran for 265550 frames Cell Events: 7496 mean_circ: 0.905805
Ran for 266050 frames Cell Events: 7510 mean_circ: 0.905816
Ran for 266550 frames Cell Events: 7526 mean_circ: 0.90581
Ran for 267050 frames Cell Events: 7537 mean_circ: 0.905808
Ran for 267550 frames Cell Events: 7553 mean_circ: 0.905769
Ran for 268050 frames Cell Events: 7565 mean_circ: 0.90578
Ran for 269050 frames Cell Events: 7593 mean_circ: 0.90577
Ran for 269550 frames Cell Events: 7611 mean_circ: 0.905735
Ran for 271050 frames Cell Events: 7667 mean_circ: 0.905782
Ran for 271550 frames Cell Events: 7682 mean_circ: 0.905804
Ran for 272050 frames Cell Events: 7696 mean_circ: 0.905807
Ran for 272550 frames Cell Events: 7708 mean_circ: 0.905808
Ran for 273050 frames Cell Events: 7717 mean_circ: 0.905815
Ran for 273550 frames Cell Events: 7732 mean_circ: 0.905838
Ran for 274050 frames Cell Events: 7747 mean_circ: 0.905843
Ran for 274550 frames Cell Events: 7760 mean_circ: 0.905809
Ran for 275050 frames Cell Events: 7773 mean_circ: 0.905805
Ran for 275550 frames Cell Events: 7791 mean_circ: 0.905818
Ran for 277550 frames Cell Events: 7846 mean_circ: 0.905889
Ran for 278050 frames Cell Events: 7859 mean_circ: 0.905878
Ran for 278550 frames Cell Events: 7876 mean_circ: 0.905852
Ran for 279050 frames Cell Events: 7882 mean_circ: 0.905831
Ran for 279550 frames Cell Events: 7890 mean_circ: 0.905822
Ran for 280050 frames Cell Events: 7902 mean_circ: 0.905847
Ran for 280550 frames Cell Events: 7908 mean_circ: 0.905826
Ran for 281050 frames Cell Events: 7919 mean_circ: 0.905841
Ran for 282050 frames Cell Events: 7954 mean_circ: 0.905788
Ran for 282550 frames Cell Events: 7966 mean_circ: 0.905806
Ran for 283550 frames Cell Events: 8006 mean_circ: 0.905837
Ran for 284050 frames Cell Events: 8021 mean_circ: 0.905869
Ran for 285050 frames Cell Events: 8048 mean_circ: 0.905831
Ran for 285550 frames Cell Events: 8058 mean_circ: 0.905834
Ran for 286050 frames Cell Events: 8072 mean_circ: 0.905824
Ran for 287050 frames Cell Events: 8117 mean_circ: 0.905885
Ran for 287550 frames Cell Events: 8128 mean_circ: 0.905823
Ran for 288050 frames Cell Events: 8147 mean_circ: 0.90581
Ran for 288550 frames Cell Events: 8160 mean_circ: 0.905789
Ran for 289050 frames Cell Events: 8172 mean_circ: 0.9058
Ran for 291050 frames Cell Events: 8212 mean_circ: 0.905758
Ran for 291550 frames Cell Events: 8225 mean_circ: 0.905767
Ran for 292550 frames Cell Events: 8253 mean_circ: 0.905736
Ran for 293050 frames Cell Events: 8279 mean_circ: 0.905763
Ran for 293550 frames Cell Events: 8296 mean_circ: 0.905775
Ran for 294050 frames Cell Events: 8309 mean_circ: 0.905788
Ran for 295050 frames Cell Events: 8342 mean_circ: 0.905845
Ran for 296050 frames Cell Events: 8369 mean_circ: 0.905832
Ran for 298550 frames Cell Events: 8452 mean_circ: 0.905911
Ran for 299050 frames Cell Events: 8464 mean_circ: 0.905923
Ran for 300050 frames Cell Events: 8505 mean_circ: 0.905912
Ran for 300550 frames Cell Events: 8521 mean_circ: 0.905948
Ran for 301050 frames Cell Events: 8543 mean_circ: 0.905967
Ran for 301550 frames Cell Events: 8552 mean_circ: 0.905979
Ran for 302550 frames Cell Events: 8580 mean_circ: 0.90594
Ran for 303050 frames Cell Events: 8600 mean_circ: 0.905913
Ran for 303550 frames Cell Events: 8609 mean_circ: 0.905881
Ran for 304050 frames Cell Events: 8623 mean_circ: 0.905887
Ran for 304550 frames Cell Events: 8633 mean_circ: 0.905904
Ran for 305050 frames Cell Events: 8643 mean_circ: 0.905913
Ran for 305550 frames Cell Events: 8649 mean_circ: 0.905929
Ran for 306050 frames Cell Events: 8666 mean_circ: 0.905938
Ran for 307050 frames Cell Events: 8684 mean_circ: 0.905951
Ran for 307550 frames Cell Events: 8701 mean_circ: 0.905921
Ran for 308550 frames Cell Events: 8729 mean_circ: 0.905901
Ran for 309550 frames Cell Events: 8765 mean_circ: 0.905825
Ran for 310550 frames Cell Events: 8792 mean_circ: 0.905761
Ran for 311050 frames Cell Events: 8812 mean_circ: 0.905748
Ran for 312050 frames Cell Events: 8845 mean_circ: 0.905769
Ran for 312550 frames Cell Events: 8857 mean_circ: 0.905779
Ran for 313550 frames Cell Events: 8883 mean_circ: 0.905733
Ran for 314550 frames Cell Events: 8905 mean_circ: 0.905672
Ran for 315050 frames Cell Events: 8918 mean_circ: 0.905632
Ran for 315550 frames Cell Events: 8929 mean_circ: 0.905637
Ran for 316050 frames Cell Events: 8934 mean_circ: 0.905648
End this measurment..
Stopping time: 4.77706e+008
****************************************
Measurement finished
Mean Circularitiy: 0.905732
Mean Area: 650.27
Mean FL-1 intensity: 3359.36
Mean FL-2 intensity: 4368.79
Mean FL-3 intensity: 0
frames processed: 314904
Total Time: 158333ms
Number of Runs (new bg img) 0
Frames collected: 316518
Skipped frames: 9485
Rescued Frames: 1415956
Samples DAQ: 79132867
Samples written: 158258676
Samples per Channel: 79129338
FPS: 1999.06
Samples per second: 499764
Expected samples/s: 500000
Events: 8957
Events per second: 56.5705
jumped back (PMT): 17
#Frames read, frequency
# 0 frames :418097
# 1 frames :192936
# 2 frames :6658
# 3 frames :2340
# 4 frames :1171
# 5 frames :2392
# 6 frames :2791
# 7 frames :1743
# 8 frames :944
# 9 frames :568
# 10 frames :879
# 11 frames :628
# 12 frames :474
# 13 frames :343
# 14 frames :206
# 15 frames :177
# 16 frames :125
# 17 frames :113
# 18 frames :120
# 19 frames :78
# 20 frames :40
# 21 frames :33
# 22 frames :25
# 23 frames :18
# 24 frames :11
# 25 frames :5
# 26 frames :11
# 27 frames :11
# 28 frames :5
# 29 frames :5
# 30 frames :8
# 31 frames :3
# 32 frames :3
# 33 frames :2
# 34 frames :2
# 36 frames :1
# 38 frames :1
# 39 frames :1
# 40 frames :1
# 80 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.0525
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0