Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_19.33.12
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "6806aa99c6736058d1ce166696d0b771",
"name": "M1_20170620_1402_dsRNA_T7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:33:34"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8546 (max 8547) in '8546'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.4493
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.57523e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 15 mean_circ: 0.956178
Ran for 1050 frames Cell Events: 26 mean_circ: 0.947305
Ran for 1550 frames Cell Events: 43 mean_circ: 0.948993
Ran for 2050 frames Cell Events: 61 mean_circ: 0.947545
Ran for 2550 frames Cell Events: 74 mean_circ: 0.946991
Ran for 3550 frames Cell Events: 98 mean_circ: 0.941641
Ran for 4050 frames Cell Events: 115 mean_circ: 0.942364
Ran for 4550 frames Cell Events: 129 mean_circ: 0.941152
Ran for 5050 frames Cell Events: 147 mean_circ: 0.941246
Ran for 6050 frames Cell Events: 171 mean_circ: 0.941336
Ran for 6550 frames Cell Events: 188 mean_circ: 0.941569
Ran for 8050 frames Cell Events: 229 mean_circ: 0.940944
Ran for 8550 frames Cell Events: 250 mean_circ: 0.941792
Ran for 9050 frames Cell Events: 261 mean_circ: 0.94232
Ran for 9550 frames Cell Events: 278 mean_circ: 0.942176
Ran for 10050 frames Cell Events: 292 mean_circ: 0.941695
Ran for 10550 frames Cell Events: 305 mean_circ: 0.942057
Ran for 11550 frames Cell Events: 334 mean_circ: 0.940884
Ran for 12550 frames Cell Events: 362 mean_circ: 0.941178
Ran for 13550 frames Cell Events: 397 mean_circ: 0.940799
Ran for 14550 frames Cell Events: 415 mean_circ: 0.939774
Ran for 15050 frames Cell Events: 432 mean_circ: 0.939959
Ran for 15550 frames Cell Events: 444 mean_circ: 0.939428
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Ran for 16550 frames Cell Events: 457 mean_circ: 0.939924
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Ran for 19050 frames Cell Events: 534 mean_circ: 0.940708
Ran for 20550 frames Cell Events: 579 mean_circ: 0.940822
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Ran for 22550 frames Cell Events: 625 mean_circ: 0.940219
Ran for 23550 frames Cell Events: 647 mean_circ: 0.940105
Ran for 24050 frames Cell Events: 664 mean_circ: 0.939711
Ran for 24550 frames Cell Events: 670 mean_circ: 0.939501
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Ran for 25550 frames Cell Events: 699 mean_circ: 0.940049
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Ran for 30550 frames Cell Events: 830 mean_circ: 0.939875
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Ran for 32050 frames Cell Events: 879 mean_circ: 0.939428
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Ran for 33550 frames Cell Events: 919 mean_circ: 0.939284
Ran for 34550 frames Cell Events: 954 mean_circ: 0.939346
Ran for 35050 frames Cell Events: 969 mean_circ: 0.939348
Ran for 35550 frames Cell Events: 985 mean_circ: 0.939601
Ran for 36050 frames Cell Events: 997 mean_circ: 0.939562
Ran for 37050 frames Cell Events: 1025 mean_circ: 0.939295
Ran for 37550 frames Cell Events: 1038 mean_circ: 0.93931
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Ran for 38550 frames Cell Events: 1060 mean_circ: 0.939374
Ran for 39050 frames Cell Events: 1072 mean_circ: 0.939306
Ran for 39550 frames Cell Events: 1083 mean_circ: 0.939363
Ran for 40050 frames Cell Events: 1097 mean_circ: 0.939482
Ran for 40550 frames Cell Events: 1118 mean_circ: 0.939498
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Ran for 43050 frames Cell Events: 1191 mean_circ: 0.939307
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Ran for 47050 frames Cell Events: 1319 mean_circ: 0.939636
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Ran for 48050 frames Cell Events: 1345 mean_circ: 0.939408
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Ran for 49050 frames Cell Events: 1373 mean_circ: 0.939623
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Ran for 56550 frames Cell Events: 1586 mean_circ: 0.939422
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Ran for 60550 frames Cell Events: 1706 mean_circ: 0.939645
Ran for 61050 frames Cell Events: 1715 mean_circ: 0.939554
Ran for 61550 frames Cell Events: 1735 mean_circ: 0.939569
Ran for 63550 frames Cell Events: 1788 mean_circ: 0.939507
Ran for 64050 frames Cell Events: 1811 mean_circ: 0.939488
Ran for 65550 frames Cell Events: 1862 mean_circ: 0.939456
Ran for 66550 frames Cell Events: 1896 mean_circ: 0.939566
Ran for 67050 frames Cell Events: 1909 mean_circ: 0.939582
Ran for 67550 frames Cell Events: 1913 mean_circ: 0.9396
Ran for 68050 frames Cell Events: 1927 mean_circ: 0.939553
Ran for 68550 frames Cell Events: 1944 mean_circ: 0.939576
Ran for 69050 frames Cell Events: 1954 mean_circ: 0.939484
Ran for 70550 frames Cell Events: 2000 mean_circ: 0.939167
Ran for 71050 frames Cell Events: 2010 mean_circ: 0.939144
Ran for 71550 frames Cell Events: 2027 mean_circ: 0.939189
Ran for 73050 frames Cell Events: 2072 mean_circ: 0.939453
Ran for 73550 frames Cell Events: 2084 mean_circ: 0.939447
Ran for 74050 frames Cell Events: 2094 mean_circ: 0.939333
Ran for 74550 frames Cell Events: 2110 mean_circ: 0.939346
Ran for 75050 frames Cell Events: 2128 mean_circ: 0.939273
Ran for 76050 frames Cell Events: 2148 mean_circ: 0.93926
Ran for 76550 frames Cell Events: 2168 mean_circ: 0.939245
Ran for 77550 frames Cell Events: 2203 mean_circ: 0.939306
Ran for 78550 frames Cell Events: 2225 mean_circ: 0.939372
Ran for 79050 frames Cell Events: 2238 mean_circ: 0.939327
Ran for 79550 frames Cell Events: 2256 mean_circ: 0.939343
Ran for 80050 frames Cell Events: 2270 mean_circ: 0.939358
Ran for 80550 frames Cell Events: 2283 mean_circ: 0.939249
Ran for 81050 frames Cell Events: 2303 mean_circ: 0.939209
Ran for 81550 frames Cell Events: 2314 mean_circ: 0.939175
Ran for 83050 frames Cell Events: 2369 mean_circ: 0.939182
Ran for 83550 frames Cell Events: 2382 mean_circ: 0.939234
Ran for 84050 frames Cell Events: 2391 mean_circ: 0.939289
Ran for 84550 frames Cell Events: 2402 mean_circ: 0.939338
Ran for 85050 frames Cell Events: 2419 mean_circ: 0.939288
Ran for 85550 frames Cell Events: 2425 mean_circ: 0.939337
Ran for 86050 frames Cell Events: 2431 mean_circ: 0.939245
Ran for 86550 frames Cell Events: 2450 mean_circ: 0.939314
Ran for 87050 frames Cell Events: 2455 mean_circ: 0.939245
Ran for 88550 frames Cell Events: 2493 mean_circ: 0.939169
Ran for 89550 frames Cell Events: 2526 mean_circ: 0.939001
Ran for 90050 frames Cell Events: 2548 mean_circ: 0.939063
Ran for 91050 frames Cell Events: 2582 mean_circ: 0.93906
Ran for 93550 frames Cell Events: 2656 mean_circ: 0.939114
Ran for 94050 frames Cell Events: 2669 mean_circ: 0.939079
Ran for 94550 frames Cell Events: 2692 mean_circ: 0.939089
Ran for 95050 frames Cell Events: 2702 mean_circ: 0.939079
Ran for 95550 frames Cell Events: 2714 mean_circ: 0.939151
Ran for 96550 frames Cell Events: 2749 mean_circ: 0.939112
Ran for 97550 frames Cell Events: 2784 mean_circ: 0.939104
Ran for 98050 frames Cell Events: 2792 mean_circ: 0.939096
Ran for 99050 frames Cell Events: 2827 mean_circ: 0.939046
Ran for 100050 frames Cell Events: 2856 mean_circ: 0.939165
Ran for 100550 frames Cell Events: 2871 mean_circ: 0.939153
Ran for 101050 frames Cell Events: 2890 mean_circ: 0.939109
Ran for 102050 frames Cell Events: 2930 mean_circ: 0.938996
Ran for 102550 frames Cell Events: 2940 mean_circ: 0.938936
Ran for 103050 frames Cell Events: 2953 mean_circ: 0.938983
Ran for 103550 frames Cell Events: 2964 mean_circ: 0.938938
Ran for 104050 frames Cell Events: 2970 mean_circ: 0.938852
Ran for 104550 frames Cell Events: 2981 mean_circ: 0.938809
Ran for 105050 frames Cell Events: 3001 mean_circ: 0.938747
Ran for 105550 frames Cell Events: 3015 mean_circ: 0.938758
Ran for 106050 frames Cell Events: 3022 mean_circ: 0.938808
Ran for 107050 frames Cell Events: 3047 mean_circ: 0.938761
Ran for 107550 frames Cell Events: 3060 mean_circ: 0.93876
Ran for 108050 frames Cell Events: 3076 mean_circ: 0.938751
Ran for 109050 frames Cell Events: 3109 mean_circ: 0.938809
Ran for 110050 frames Cell Events: 3136 mean_circ: 0.93859
Ran for 110550 frames Cell Events: 3149 mean_circ: 0.938596
Ran for 111050 frames Cell Events: 3160 mean_circ: 0.938615
Ran for 111550 frames Cell Events: 3171 mean_circ: 0.938602
Ran for 112050 frames Cell Events: 3182 mean_circ: 0.938626
Ran for 112550 frames Cell Events: 3195 mean_circ: 0.938493
Ran for 113050 frames Cell Events: 3213 mean_circ: 0.938587
Ran for 114050 frames Cell Events: 3258 mean_circ: 0.938515
Ran for 114550 frames Cell Events: 3271 mean_circ: 0.93851
Ran for 115050 frames Cell Events: 3281 mean_circ: 0.938489
Ran for 115550 frames Cell Events: 3292 mean_circ: 0.938434
Ran for 116050 frames Cell Events: 3303 mean_circ: 0.938464
Ran for 117050 frames Cell Events: 3344 mean_circ: 0.938455
Ran for 118050 frames Cell Events: 3369 mean_circ: 0.938402
Ran for 118550 frames Cell Events: 3377 mean_circ: 0.938428
Ran for 119050 frames Cell Events: 3383 mean_circ: 0.938448
Ran for 119550 frames Cell Events: 3401 mean_circ: 0.938392
Ran for 120050 frames Cell Events: 3411 mean_circ: 0.938405
Ran for 120550 frames Cell Events: 3423 mean_circ: 0.938417
Ran for 121050 frames Cell Events: 3432 mean_circ: 0.938428
Ran for 121550 frames Cell Events: 3450 mean_circ: 0.938467
Ran for 122050 frames Cell Events: 3466 mean_circ: 0.938511
Ran for 122550 frames Cell Events: 3478 mean_circ: 0.938496
Ran for 124050 frames Cell Events: 3528 mean_circ: 0.938601
Ran for 124550 frames Cell Events: 3537 mean_circ: 0.938607
Ran for 125050 frames Cell Events: 3546 mean_circ: 0.938636
Ran for 125550 frames Cell Events: 3557 mean_circ: 0.938641
Ran for 126550 frames Cell Events: 3585 mean_circ: 0.938576
Ran for 127550 frames Cell Events: 3623 mean_circ: 0.938573
Ran for 128050 frames Cell Events: 3640 mean_circ: 0.938611
Ran for 130050 frames Cell Events: 3705 mean_circ: 0.938626
Ran for 130550 frames Cell Events: 3722 mean_circ: 0.938651
Ran for 131050 frames Cell Events: 3739 mean_circ: 0.938687
Ran for 131550 frames Cell Events: 3751 mean_circ: 0.938701
Ran for 132050 frames Cell Events: 3767 mean_circ: 0.938706
Ran for 132550 frames Cell Events: 3782 mean_circ: 0.938681
Ran for 133550 frames Cell Events: 3819 mean_circ: 0.93864
Ran for 134050 frames Cell Events: 3830 mean_circ: 0.938668
Ran for 134550 frames Cell Events: 3847 mean_circ: 0.938675
Ran for 135050 frames Cell Events: 3855 mean_circ: 0.938697
Ran for 135550 frames Cell Events: 3871 mean_circ: 0.938755
Ran for 136550 frames Cell Events: 3895 mean_circ: 0.938761
Ran for 137550 frames Cell Events: 3922 mean_circ: 0.938689
Ran for 138050 frames Cell Events: 3941 mean_circ: 0.938688
Ran for 138550 frames Cell Events: 3952 mean_circ: 0.938702
Ran for 139050 frames Cell Events: 3964 mean_circ: 0.938631
Ran for 139550 frames Cell Events: 3976 mean_circ: 0.938613
Ran for 140550 frames Cell Events: 4007 mean_circ: 0.938616
Ran for 141050 frames Cell Events: 4023 mean_circ: 0.938601
Ran for 142550 frames Cell Events: 4080 mean_circ: 0.938588
Ran for 143050 frames Cell Events: 4101 mean_circ: 0.938547
Ran for 143550 frames Cell Events: 4112 mean_circ: 0.938526
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Ran for 145550 frames Cell Events: 4186 mean_circ: 0.938368
Ran for 146050 frames Cell Events: 4207 mean_circ: 0.938343
Ran for 146550 frames Cell Events: 4217 mean_circ: 0.938382
Ran for 148050 frames Cell Events: 4263 mean_circ: 0.938488
Ran for 148550 frames Cell Events: 4280 mean_circ: 0.938433
Ran for 149050 frames Cell Events: 4292 mean_circ: 0.938433
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Ran for 150550 frames Cell Events: 4337 mean_circ: 0.938427
Ran for 151050 frames Cell Events: 4355 mean_circ: 0.938468
Ran for 151550 frames Cell Events: 4374 mean_circ: 0.938499
Ran for 152050 frames Cell Events: 4392 mean_circ: 0.938519
Ran for 152550 frames Cell Events: 4400 mean_circ: 0.938508
Ran for 153050 frames Cell Events: 4415 mean_circ: 0.938537
Ran for 153550 frames Cell Events: 4436 mean_circ: 0.93855
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Ran for 157050 frames Cell Events: 4550 mean_circ: 0.93847
Ran for 158050 frames Cell Events: 4584 mean_circ: 0.938448
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Ran for 159050 frames Cell Events: 4614 mean_circ: 0.938397
Ran for 159550 frames Cell Events: 4632 mean_circ: 0.938308
Ran for 160050 frames Cell Events: 4647 mean_circ: 0.938323
Ran for 160550 frames Cell Events: 4655 mean_circ: 0.938301
Ran for 161050 frames Cell Events: 4671 mean_circ: 0.938306
Ran for 161550 frames Cell Events: 4685 mean_circ: 0.938307
Ran for 162050 frames Cell Events: 4698 mean_circ: 0.938328
Ran for 162550 frames Cell Events: 4714 mean_circ: 0.938313
Ran for 163050 frames Cell Events: 4728 mean_circ: 0.93833
Ran for 163550 frames Cell Events: 4739 mean_circ: 0.938364
Ran for 164050 frames Cell Events: 4752 mean_circ: 0.938342
Ran for 164550 frames Cell Events: 4778 mean_circ: 0.938364
Ran for 165050 frames Cell Events: 4796 mean_circ: 0.938289
Ran for 166050 frames Cell Events: 4828 mean_circ: 0.938361
Ran for 166550 frames Cell Events: 4846 mean_circ: 0.93841
Ran for 167050 frames Cell Events: 4861 mean_circ: 0.938379
Ran for 168050 frames Cell Events: 4882 mean_circ: 0.938324
Ran for 169050 frames Cell Events: 4914 mean_circ: 0.938375
Ran for 169550 frames Cell Events: 4927 mean_circ: 0.938391
Ran for 171050 frames Cell Events: 4982 mean_circ: 0.938344
Ran for 174050 frames Cell Events: 5091 mean_circ: 0.938387
Ran for 174550 frames Cell Events: 5116 mean_circ: 0.938419
Ran for 175550 frames Cell Events: 5158 mean_circ: 0.93838
Ran for 176550 frames Cell Events: 5191 mean_circ: 0.93841
Ran for 177050 frames Cell Events: 5201 mean_circ: 0.938375
Ran for 177550 frames Cell Events: 5219 mean_circ: 0.938357
Ran for 178050 frames Cell Events: 5236 mean_circ: 0.938342
Ran for 178550 frames Cell Events: 5246 mean_circ: 0.938353
Ran for 179050 frames Cell Events: 5263 mean_circ: 0.938319
Ran for 179550 frames Cell Events: 5276 mean_circ: 0.938344
Ran for 180050 frames Cell Events: 5286 mean_circ: 0.938356
Ran for 181050 frames Cell Events: 5317 mean_circ: 0.938387
Ran for 181550 frames Cell Events: 5340 mean_circ: 0.93841
Ran for 182050 frames Cell Events: 5357 mean_circ: 0.938459
Ran for 182550 frames Cell Events: 5371 mean_circ: 0.938403
Ran for 183050 frames Cell Events: 5384 mean_circ: 0.938297
Ran for 183550 frames Cell Events: 5403 mean_circ: 0.938276
Ran for 184050 frames Cell Events: 5428 mean_circ: 0.9383
Ran for 184550 frames Cell Events: 5441 mean_circ: 0.9382
Ran for 185050 frames Cell Events: 5457 mean_circ: 0.938216
Ran for 186050 frames Cell Events: 5486 mean_circ: 0.938166
Ran for 186550 frames Cell Events: 5501 mean_circ: 0.938145
Ran for 188050 frames Cell Events: 5548 mean_circ: 0.938089
Ran for 188550 frames Cell Events: 5563 mean_circ: 0.938115
Ran for 189550 frames Cell Events: 5596 mean_circ: 0.938168
Ran for 190050 frames Cell Events: 5610 mean_circ: 0.938142
Ran for 190550 frames Cell Events: 5630 mean_circ: 0.938105
Ran for 191050 frames Cell Events: 5645 mean_circ: 0.93815
Ran for 191550 frames Cell Events: 5657 mean_circ: 0.938165
Ran for 192050 frames Cell Events: 5675 mean_circ: 0.938184
Ran for 192550 frames Cell Events: 5686 mean_circ: 0.938197
Ran for 193050 frames Cell Events: 5708 mean_circ: 0.938148
Ran for 193550 frames Cell Events: 5725 mean_circ: 0.93812
Ran for 194550 frames Cell Events: 5756 mean_circ: 0.938089
Ran for 195050 frames Cell Events: 5767 mean_circ: 0.938088
Ran for 195550 frames Cell Events: 5774 mean_circ: 0.938123
Ran for 196050 frames Cell Events: 5779 mean_circ: 0.938104
Ran for 196550 frames Cell Events: 5794 mean_circ: 0.938065
Ran for 197050 frames Cell Events: 5808 mean_circ: 0.938037
Ran for 197550 frames Cell Events: 5820 mean_circ: 0.93807
Ran for 198550 frames Cell Events: 5853 mean_circ: 0.938068
Ran for 199550 frames Cell Events: 5882 mean_circ: 0.938073
Ran for 200050 frames Cell Events: 5894 mean_circ: 0.938007
Ran for 202050 frames Cell Events: 5958 mean_circ: 0.937919
Ran for 202550 frames Cell Events: 5969 mean_circ: 0.937918
Ran for 203050 frames Cell Events: 5984 mean_circ: 0.937878
Ran for 203550 frames Cell Events: 5993 mean_circ: 0.937873
Ran for 204050 frames Cell Events: 6011 mean_circ: 0.937862
Ran for 204550 frames Cell Events: 6022 mean_circ: 0.937859
Ran for 205050 frames Cell Events: 6038 mean_circ: 0.937821
Ran for 205550 frames Cell Events: 6046 mean_circ: 0.937815
Ran for 206050 frames Cell Events: 6060 mean_circ: 0.937817
Ran for 206550 frames Cell Events: 6077 mean_circ: 0.937864
Ran for 207050 frames Cell Events: 6096 mean_circ: 0.937869
Ran for 207550 frames Cell Events: 6115 mean_circ: 0.937882
Ran for 208050 frames Cell Events: 6130 mean_circ: 0.93786
Ran for 208550 frames Cell Events: 6150 mean_circ: 0.937851
Ran for 209050 frames Cell Events: 6168 mean_circ: 0.937847
Ran for 209550 frames Cell Events: 6174 mean_circ: 0.937822
Ran for 210050 frames Cell Events: 6188 mean_circ: 0.937857
Ran for 210550 frames Cell Events: 6207 mean_circ: 0.937802
Ran for 211050 frames Cell Events: 6231 mean_circ: 0.937804
Ran for 212050 frames Cell Events: 6268 mean_circ: 0.937776
Ran for 213050 frames Cell Events: 6302 mean_circ: 0.937774
Ran for 214050 frames Cell Events: 6330 mean_circ: 0.937756
Ran for 214550 frames Cell Events: 6346 mean_circ: 0.937784
Ran for 215550 frames Cell Events: 6370 mean_circ: 0.937789
Ran for 216050 frames Cell Events: 6385 mean_circ: 0.937797
Ran for 217050 frames Cell Events: 6414 mean_circ: 0.93782
Ran for 217550 frames Cell Events: 6429 mean_circ: 0.937817
Ran for 218550 frames Cell Events: 6456 mean_circ: 0.937785
Ran for 219050 frames Cell Events: 6474 mean_circ: 0.937776
Ran for 220050 frames Cell Events: 6505 mean_circ: 0.937747
Ran for 220550 frames Cell Events: 6524 mean_circ: 0.937762
Ran for 221550 frames Cell Events: 6551 mean_circ: 0.937737
Ran for 222550 frames Cell Events: 6583 mean_circ: 0.937782
Ran for 223050 frames Cell Events: 6603 mean_circ: 0.937775
Ran for 223550 frames Cell Events: 6621 mean_circ: 0.937726
Ran for 224550 frames Cell Events: 6673 mean_circ: 0.937659
Ran for 225050 frames Cell Events: 6688 mean_circ: 0.93769
Ran for 225550 frames Cell Events: 6701 mean_circ: 0.937722
Ran for 226050 frames Cell Events: 6716 mean_circ: 0.937744
Ran for 227550 frames Cell Events: 6771 mean_circ: 0.937722
Ran for 228050 frames Cell Events: 6788 mean_circ: 0.93771
Ran for 228550 frames Cell Events: 6801 mean_circ: 0.93762
Ran for 230050 frames Cell Events: 6850 mean_circ: 0.937582
Ran for 231550 frames Cell Events: 6903 mean_circ: 0.937631
Ran for 232050 frames Cell Events: 6922 mean_circ: 0.937603
Ran for 232550 frames Cell Events: 6944 mean_circ: 0.937613
Ran for 233050 frames Cell Events: 6957 mean_circ: 0.937637
Ran for 233550 frames Cell Events: 6971 mean_circ: 0.937649
Ran for 234050 frames Cell Events: 6986 mean_circ: 0.937663
Ran for 234550 frames Cell Events: 7012 mean_circ: 0.937663
Ran for 235050 frames Cell Events: 7029 mean_circ: 0.937623
Ran for 236550 frames Cell Events: 7065 mean_circ: 0.937668
Ran for 237050 frames Cell Events: 7088 mean_circ: 0.937666
Ran for 237550 frames Cell Events: 7101 mean_circ: 0.937644
Ran for 238550 frames Cell Events: 7136 mean_circ: 0.937632
Ran for 239050 frames Cell Events: 7147 mean_circ: 0.937641
Ran for 239550 frames Cell Events: 7166 mean_circ: 0.93764
Ran for 240050 frames Cell Events: 7182 mean_circ: 0.937635
Ran for 240550 frames Cell Events: 7204 mean_circ: 0.937654
Ran for 241050 frames Cell Events: 7218 mean_circ: 0.937679
Ran for 242050 frames Cell Events: 7253 mean_circ: 0.937656
Ran for 242550 frames Cell Events: 7266 mean_circ: 0.937661
Ran for 243050 frames Cell Events: 7282 mean_circ: 0.937692
Ran for 243550 frames Cell Events: 7299 mean_circ: 0.937693
Ran for 244050 frames Cell Events: 7323 mean_circ: 0.937677
Ran for 244550 frames Cell Events: 7340 mean_circ: 0.937679
Ran for 245050 frames Cell Events: 7356 mean_circ: 0.937653
Ran for 246050 frames Cell Events: 7390 mean_circ: 0.937677
Ran for 246550 frames Cell Events: 7407 mean_circ: 0.937672
Ran for 247550 frames Cell Events: 7428 mean_circ: 0.93768
Ran for 248550 frames Cell Events: 7455 mean_circ: 0.93765
Ran for 249050 frames Cell Events: 7471 mean_circ: 0.937653
Ran for 249550 frames Cell Events: 7486 mean_circ: 0.937661
Ran for 250050 frames Cell Events: 7499 mean_circ: 0.937684
Ran for 251050 frames Cell Events: 7543 mean_circ: 0.937713
Ran for 251550 frames Cell Events: 7560 mean_circ: 0.937727
Ran for 252050 frames Cell Events: 7572 mean_circ: 0.937743
Ran for 253050 frames Cell Events: 7611 mean_circ: 0.937755
Ran for 254050 frames Cell Events: 7646 mean_circ: 0.937685
Ran for 254550 frames Cell Events: 7664 mean_circ: 0.937701
Ran for 255050 frames Cell Events: 7680 mean_circ: 0.937709
Ran for 255550 frames Cell Events: 7702 mean_circ: 0.937744
Ran for 256050 frames Cell Events: 7718 mean_circ: 0.937723
Ran for 256550 frames Cell Events: 7731 mean_circ: 0.937744
Ran for 257050 frames Cell Events: 7758 mean_circ: 0.937742
Ran for 257550 frames Cell Events: 7774 mean_circ: 0.937756
Ran for 258550 frames Cell Events: 7812 mean_circ: 0.937756
Ran for 259050 frames Cell Events: 7826 mean_circ: 0.937785
Ran for 259550 frames Cell Events: 7838 mean_circ: 0.937763
Ran for 260050 frames Cell Events: 7858 mean_circ: 0.937737
Ran for 260550 frames Cell Events: 7881 mean_circ: 0.93772
Ran for 261050 frames Cell Events: 7899 mean_circ: 0.937733
Ran for 261550 frames Cell Events: 7910 mean_circ: 0.937737
Ran for 262550 frames Cell Events: 7945 mean_circ: 0.937724
Ran for 263050 frames Cell Events: 7960 mean_circ: 0.937696
Ran for 263550 frames Cell Events: 7981 mean_circ: 0.937692
Ran for 264050 frames Cell Events: 8003 mean_circ: 0.937718
Ran for 265050 frames Cell Events: 8038 mean_circ: 0.937736
Ran for 265550 frames Cell Events: 8061 mean_circ: 0.937723
Ran for 267550 frames Cell Events: 8138 mean_circ: 0.937745
Ran for 268050 frames Cell Events: 8151 mean_circ: 0.937731
Ran for 268550 frames Cell Events: 8168 mean_circ: 0.93772
Ran for 269050 frames Cell Events: 8183 mean_circ: 0.937714
Ran for 269550 frames Cell Events: 8210 mean_circ: 0.937706
Ran for 270550 frames Cell Events: 8256 mean_circ: 0.937714
Ran for 271050 frames Cell Events: 8271 mean_circ: 0.937719
Ran for 271550 frames Cell Events: 8285 mean_circ: 0.937729
Ran for 273050 frames Cell Events: 8331 mean_circ: 0.937711
Ran for 273550 frames Cell Events: 8350 mean_circ: 0.937697
Ran for 274050 frames Cell Events: 8360 mean_circ: 0.93768
Ran for 274550 frames Cell Events: 8377 mean_circ: 0.937659
Ran for 275050 frames Cell Events: 8396 mean_circ: 0.93768
Ran for 275550 frames Cell Events: 8408 mean_circ: 0.937697
Ran for 276050 frames Cell Events: 8422 mean_circ: 0.937698
Ran for 276550 frames Cell Events: 8435 mean_circ: 0.937694
Ran for 277050 frames Cell Events: 8451 mean_circ: 0.937729
Ran for 278050 frames Cell Events: 8471 mean_circ: 0.937716
Ran for 278550 frames Cell Events: 8496 mean_circ: 0.937706
Ran for 279550 frames Cell Events: 8529 mean_circ: 0.937739
Ran for 280050 frames Cell Events: 8537 mean_circ: 0.937703
End this measurment..
Stopping time: 5.57663e+008
****************************************
Measurement finished
Mean Circularitiy: 0.937696
Mean Area: 673.123
Mean FL-1 intensity: 3782.05
Mean FL-2 intensity: 4437.13
Mean FL-3 intensity: 0
frames processed: 280338
Total Time: 140302ms
Number of Runs (new bg img) 0
Frames collected: 280410
Skipped frames: 2524
Rescued Frames: 762013
Samples DAQ: 70104262
Samples written: 140204952
Samples per Channel: 70102476
FPS: 1998.61
Samples per second: 499653
Expected samples/s: 500000
Events: 8547
Events per second: 60.9185
jumped back (PMT): 6767
#Frames read, frequency
# 0 frames :387738
# 1 frames :151775
# 2 frames :6856
# 3 frames :2314
# 4 frames :1328
# 5 frames :528
# 6 frames :996
# 7 frames :3103
# 8 frames :936
# 9 frames :717
# 10 frames :1173
# 11 frames :970
# 12 frames :629
# 13 frames :388
# 14 frames :230
# 15 frames :240
# 16 frames :183
# 17 frames :147
# 18 frames :113
# 19 frames :83
# 20 frames :58
# 21 frames :43
# 22 frames :44
# 23 frames :37
# 24 frames :30
# 25 frames :20
# 26 frames :22
# 27 frames :16
# 28 frames :8
# 29 frames :10
# 30 frames :9
# 31 frames :6
# 32 frames :2
# 33 frames :1
# 34 frames :3
# 35 frames :1
# 37 frames :1
# 39 frames :1
# 41 frames :1
# 42 frames :1
# 72 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.4493
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0