Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_19.38.04
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "067f9426460a30b46af80f5677358b3c",
"name": "M1_20170620_1509_dsRNA_A2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:38:30"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7916
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.6149e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.938896
Ran for 550 frames Cell Events: 11 mean_circ: 0.958822
Ran for 1050 frames Cell Events: 37 mean_circ: 0.958822
Ran for 1550 frames Cell Events: 56 mean_circ: 0.950127
Ran for 2550 frames Cell Events: 82 mean_circ: 0.951685
Ran for 5050 frames Cell Events: 168 mean_circ: 0.949284
Ran for 5550 frames Cell Events: 186 mean_circ: 0.949356
Ran for 6550 frames Cell Events: 235 mean_circ: 0.949262
Ran for 7050 frames Cell Events: 247 mean_circ: 0.949224
Ran for 7550 frames Cell Events: 267 mean_circ: 0.948138
Ran for 8050 frames Cell Events: 284 mean_circ: 0.947948
Ran for 8550 frames Cell Events: 296 mean_circ: 0.947257
Ran for 9050 frames Cell Events: 313 mean_circ: 0.947422
Ran for 10050 frames Cell Events: 344 mean_circ: 0.947902
Ran for 10550 frames Cell Events: 357 mean_circ: 0.94765
Ran for 11050 frames Cell Events: 372 mean_circ: 0.947559
Ran for 11550 frames Cell Events: 391 mean_circ: 0.94783
Ran for 12050 frames Cell Events: 417 mean_circ: 0.947259
Ran for 13550 frames Cell Events: 471 mean_circ: 0.946985
Ran for 14550 frames Cell Events: 525 mean_circ: 0.946782
Ran for 15050 frames Cell Events: 550 mean_circ: 0.945552
Ran for 15550 frames Cell Events: 567 mean_circ: 0.945474
Ran for 17050 frames Cell Events: 617 mean_circ: 0.945342
Ran for 17550 frames Cell Events: 636 mean_circ: 0.945396
Ran for 18050 frames Cell Events: 650 mean_circ: 0.945627
Ran for 18550 frames Cell Events: 683 mean_circ: 0.945627
Ran for 19050 frames Cell Events: 704 mean_circ: 0.944508
Ran for 20050 frames Cell Events: 734 mean_circ: 0.944479
Ran for 20550 frames Cell Events: 752 mean_circ: 0.944483
Ran for 21050 frames Cell Events: 770 mean_circ: 0.944378
Ran for 21550 frames Cell Events: 786 mean_circ: 0.944153
Ran for 22550 frames Cell Events: 810 mean_circ: 0.944456
Ran for 23050 frames Cell Events: 824 mean_circ: 0.944521
Ran for 23550 frames Cell Events: 845 mean_circ: 0.944124
Ran for 25050 frames Cell Events: 886 mean_circ: 0.943844
Ran for 26050 frames Cell Events: 934 mean_circ: 0.943726
Ran for 26550 frames Cell Events: 956 mean_circ: 0.943696
Ran for 27050 frames Cell Events: 976 mean_circ: 0.943452
Ran for 27550 frames Cell Events: 991 mean_circ: 0.943415
Ran for 28550 frames Cell Events: 1029 mean_circ: 0.943245
Ran for 29050 frames Cell Events: 1043 mean_circ: 0.943249
Ran for 29550 frames Cell Events: 1064 mean_circ: 0.943366
Ran for 30550 frames Cell Events: 1103 mean_circ: 0.943213
Ran for 31550 frames Cell Events: 1135 mean_circ: 0.94317
Ran for 32050 frames Cell Events: 1161 mean_circ: 0.943428
Ran for 33550 frames Cell Events: 1216 mean_circ: 0.943558
Ran for 34550 frames Cell Events: 1251 mean_circ: 0.943678
Ran for 35050 frames Cell Events: 1272 mean_circ: 0.943845
Ran for 35550 frames Cell Events: 1293 mean_circ: 0.943819
Ran for 36050 frames Cell Events: 1314 mean_circ: 0.943923
Ran for 36550 frames Cell Events: 1332 mean_circ: 0.943905
Ran for 37050 frames Cell Events: 1356 mean_circ: 0.9438
Ran for 37550 frames Cell Events: 1381 mean_circ: 0.943552
Ran for 38550 frames Cell Events: 1419 mean_circ: 0.943575
Ran for 40050 frames Cell Events: 1472 mean_circ: 0.943679
Ran for 41050 frames Cell Events: 1508 mean_circ: 0.943876
Ran for 41550 frames Cell Events: 1531 mean_circ: 0.943946
Ran for 42050 frames Cell Events: 1558 mean_circ: 0.944047
Ran for 42550 frames Cell Events: 1570 mean_circ: 0.94411
Ran for 43550 frames Cell Events: 1618 mean_circ: 0.944095
Ran for 44050 frames Cell Events: 1633 mean_circ: 0.944221
Ran for 46050 frames Cell Events: 1703 mean_circ: 0.944246
Ran for 47050 frames Cell Events: 1742 mean_circ: 0.944111
Ran for 48050 frames Cell Events: 1769 mean_circ: 0.944052
Ran for 49050 frames Cell Events: 1801 mean_circ: 0.943918
Ran for 50050 frames Cell Events: 1834 mean_circ: 0.943783
Ran for 51050 frames Cell Events: 1871 mean_circ: 0.943653
Ran for 51550 frames Cell Events: 1892 mean_circ: 0.943647
Ran for 52050 frames Cell Events: 1901 mean_circ: 0.943741
Ran for 53050 frames Cell Events: 1934 mean_circ: 0.943756
Ran for 54050 frames Cell Events: 1983 mean_circ: 0.943917
Ran for 55050 frames Cell Events: 2016 mean_circ: 0.943957
Ran for 56050 frames Cell Events: 2041 mean_circ: 0.943907
Ran for 56550 frames Cell Events: 2059 mean_circ: 0.94387
Ran for 57050 frames Cell Events: 2070 mean_circ: 0.943765
Ran for 57550 frames Cell Events: 2087 mean_circ: 0.943647
Ran for 58050 frames Cell Events: 2112 mean_circ: 0.943533
Ran for 60550 frames Cell Events: 2213 mean_circ: 0.943483
Ran for 61050 frames Cell Events: 2225 mean_circ: 0.943518
Ran for 62050 frames Cell Events: 2273 mean_circ: 0.943536
Ran for 63050 frames Cell Events: 2310 mean_circ: 0.943511
Ran for 64050 frames Cell Events: 2347 mean_circ: 0.943627
Ran for 64550 frames Cell Events: 2367 mean_circ: 0.943637
Ran for 65550 frames Cell Events: 2407 mean_circ: 0.943811
Ran for 66550 frames Cell Events: 2443 mean_circ: 0.943743
Ran for 67550 frames Cell Events: 2485 mean_circ: 0.943729
Ran for 68050 frames Cell Events: 2502 mean_circ: 0.943699
Ran for 68550 frames Cell Events: 2511 mean_circ: 0.943695
Ran for 69050 frames Cell Events: 2525 mean_circ: 0.943738
Ran for 69550 frames Cell Events: 2539 mean_circ: 0.943813
Ran for 71550 frames Cell Events: 2627 mean_circ: 0.943732
Ran for 72050 frames Cell Events: 2645 mean_circ: 0.94373
Ran for 72550 frames Cell Events: 2669 mean_circ: 0.943776
Ran for 73050 frames Cell Events: 2681 mean_circ: 0.943677
Ran for 74050 frames Cell Events: 2704 mean_circ: 0.943758
Ran for 75050 frames Cell Events: 2734 mean_circ: 0.943757
Ran for 75550 frames Cell Events: 2750 mean_circ: 0.943856
Ran for 77050 frames Cell Events: 2805 mean_circ: 0.943996
Ran for 78550 frames Cell Events: 2865 mean_circ: 0.94391
Ran for 79550 frames Cell Events: 2903 mean_circ: 0.944013
Ran for 81050 frames Cell Events: 2952 mean_circ: 0.943893
Ran for 81550 frames Cell Events: 2966 mean_circ: 0.943812
Ran for 85050 frames Cell Events: 3107 mean_circ: 0.943497
Ran for 85550 frames Cell Events: 3131 mean_circ: 0.943491
Ran for 86550 frames Cell Events: 3167 mean_circ: 0.943467
Ran for 87050 frames Cell Events: 3185 mean_circ: 0.943523
Ran for 87550 frames Cell Events: 3201 mean_circ: 0.943455
Ran for 88550 frames Cell Events: 3239 mean_circ: 0.943561
Ran for 89050 frames Cell Events: 3264 mean_circ: 0.943506
Ran for 89550 frames Cell Events: 3279 mean_circ: 0.943539
Ran for 90550 frames Cell Events: 3312 mean_circ: 0.943589
Ran for 91550 frames Cell Events: 3347 mean_circ: 0.943609
Ran for 92050 frames Cell Events: 3351 mean_circ: 0.943637
Ran for 92550 frames Cell Events: 3361 mean_circ: 0.943662
Ran for 94050 frames Cell Events: 3413 mean_circ: 0.943755
Ran for 95050 frames Cell Events: 3446 mean_circ: 0.943642
Ran for 96050 frames Cell Events: 3470 mean_circ: 0.943718
Ran for 96550 frames Cell Events: 3489 mean_circ: 0.943751
Ran for 97050 frames Cell Events: 3517 mean_circ: 0.943765
Ran for 97550 frames Cell Events: 3538 mean_circ: 0.943609
Ran for 98550 frames Cell Events: 3594 mean_circ: 0.943634
Ran for 99550 frames Cell Events: 3633 mean_circ: 0.943735
Ran for 100050 frames Cell Events: 3652 mean_circ: 0.943771
Ran for 100550 frames Cell Events: 3670 mean_circ: 0.943784
Ran for 101050 frames Cell Events: 3702 mean_circ: 0.943729
Ran for 103050 frames Cell Events: 3767 mean_circ: 0.943743
Ran for 104050 frames Cell Events: 3802 mean_circ: 0.943809
Ran for 104550 frames Cell Events: 3815 mean_circ: 0.943837
Ran for 105550 frames Cell Events: 3847 mean_circ: 0.943854
Ran for 106050 frames Cell Events: 3865 mean_circ: 0.943919
Ran for 108550 frames Cell Events: 3979 mean_circ: 0.944106
Ran for 110050 frames Cell Events: 4027 mean_circ: 0.944079
Ran for 110550 frames Cell Events: 4045 mean_circ: 0.94415
Ran for 111050 frames Cell Events: 4068 mean_circ: 0.944112
Ran for 112050 frames Cell Events: 4103 mean_circ: 0.94416
Ran for 112550 frames Cell Events: 4120 mean_circ: 0.944089
Ran for 113050 frames Cell Events: 4139 mean_circ: 0.944114
Ran for 115050 frames Cell Events: 4219 mean_circ: 0.9441
Ran for 115550 frames Cell Events: 4245 mean_circ: 0.944118
Ran for 116050 frames Cell Events: 4259 mean_circ: 0.944104
Ran for 118050 frames Cell Events: 4327 mean_circ: 0.944198
Ran for 118550 frames Cell Events: 4345 mean_circ: 0.944048
Ran for 119050 frames Cell Events: 4367 mean_circ: 0.944126
Ran for 120550 frames Cell Events: 4422 mean_circ: 0.944165
Ran for 122050 frames Cell Events: 4474 mean_circ: 0.94415
Ran for 123050 frames Cell Events: 4510 mean_circ: 0.944144
Ran for 123550 frames Cell Events: 4529 mean_circ: 0.944152
Ran for 124050 frames Cell Events: 4546 mean_circ: 0.94416
Ran for 124550 frames Cell Events: 4563 mean_circ: 0.944228
Ran for 125550 frames Cell Events: 4588 mean_circ: 0.944229
Ran for 126050 frames Cell Events: 4602 mean_circ: 0.944201
Ran for 126550 frames Cell Events: 4621 mean_circ: 0.944245
Ran for 128050 frames Cell Events: 4689 mean_circ: 0.944256
Ran for 128550 frames Cell Events: 4707 mean_circ: 0.944252
Ran for 129050 frames Cell Events: 4718 mean_circ: 0.944275
Ran for 129550 frames Cell Events: 4730 mean_circ: 0.944274
Ran for 130050 frames Cell Events: 4748 mean_circ: 0.944294
Ran for 130550 frames Cell Events: 4765 mean_circ: 0.944285
Ran for 131050 frames Cell Events: 4787 mean_circ: 0.944258
Ran for 131550 frames Cell Events: 4799 mean_circ: 0.944297
Ran for 132050 frames Cell Events: 4814 mean_circ: 0.944278
Ran for 132550 frames Cell Events: 4825 mean_circ: 0.944279
Ran for 133050 frames Cell Events: 4836 mean_circ: 0.944327
Ran for 133550 frames Cell Events: 4857 mean_circ: 0.944355
Ran for 134050 frames Cell Events: 4892 mean_circ: 0.94433
Ran for 136050 frames Cell Events: 4969 mean_circ: 0.944313
Ran for 136550 frames Cell Events: 4981 mean_circ: 0.944375
Ran for 137050 frames Cell Events: 5005 mean_circ: 0.944383
Ran for 137550 frames Cell Events: 5026 mean_circ: 0.944405
Ran for 138550 frames Cell Events: 5064 mean_circ: 0.944438
Ran for 139050 frames Cell Events: 5083 mean_circ: 0.944456
Ran for 139550 frames Cell Events: 5095 mean_circ: 0.944475
Ran for 140050 frames Cell Events: 5117 mean_circ: 0.944474
Ran for 140550 frames Cell Events: 5139 mean_circ: 0.944467
Ran for 141550 frames Cell Events: 5177 mean_circ: 0.944442
Ran for 143050 frames Cell Events: 5211 mean_circ: 0.944444
Ran for 143550 frames Cell Events: 5220 mean_circ: 0.944439
Ran for 144050 frames Cell Events: 5226 mean_circ: 0.944448
Ran for 144550 frames Cell Events: 5246 mean_circ: 0.944447
Ran for 145550 frames Cell Events: 5282 mean_circ: 0.944413
Ran for 146050 frames Cell Events: 5301 mean_circ: 0.944447
Ran for 146550 frames Cell Events: 5330 mean_circ: 0.944468
Ran for 147050 frames Cell Events: 5351 mean_circ: 0.944492
Ran for 148550 frames Cell Events: 5415 mean_circ: 0.944541
Ran for 149050 frames Cell Events: 5439 mean_circ: 0.944413
Ran for 149550 frames Cell Events: 5456 mean_circ: 0.944336
Ran for 150050 frames Cell Events: 5478 mean_circ: 0.944328
Ran for 151550 frames Cell Events: 5543 mean_circ: 0.944337
Ran for 152050 frames Cell Events: 5558 mean_circ: 0.944274
Ran for 152550 frames Cell Events: 5572 mean_circ: 0.944248
Ran for 153050 frames Cell Events: 5589 mean_circ: 0.944272
Ran for 153550 frames Cell Events: 5610 mean_circ: 0.944291
Ran for 155050 frames Cell Events: 5669 mean_circ: 0.944304
Ran for 155550 frames Cell Events: 5692 mean_circ: 0.944275
Ran for 156050 frames Cell Events: 5708 mean_circ: 0.944244
Ran for 157050 frames Cell Events: 5746 mean_circ: 0.944216
Ran for 158050 frames Cell Events: 5780 mean_circ: 0.944178
Ran for 158550 frames Cell Events: 5798 mean_circ: 0.944191
Ran for 159050 frames Cell Events: 5822 mean_circ: 0.94421
Ran for 159550 frames Cell Events: 5835 mean_circ: 0.944222
Ran for 160050 frames Cell Events: 5851 mean_circ: 0.944249
Ran for 160550 frames Cell Events: 5874 mean_circ: 0.944239
Ran for 161050 frames Cell Events: 5890 mean_circ: 0.944232
Ran for 161550 frames Cell Events: 5912 mean_circ: 0.944204
Ran for 162050 frames Cell Events: 5936 mean_circ: 0.94421
Ran for 162550 frames Cell Events: 5964 mean_circ: 0.944173
Ran for 163050 frames Cell Events: 5984 mean_circ: 0.944185
Ran for 163550 frames Cell Events: 6006 mean_circ: 0.944167
Ran for 165050 frames Cell Events: 6062 mean_circ: 0.944152
Ran for 165550 frames Cell Events: 6077 mean_circ: 0.944129
Ran for 166050 frames Cell Events: 6098 mean_circ: 0.944082
Ran for 166550 frames Cell Events: 6124 mean_circ: 0.94408
Ran for 167050 frames Cell Events: 6159 mean_circ: 0.943976
Ran for 169050 frames Cell Events: 6252 mean_circ: 0.943939
Ran for 169550 frames Cell Events: 6265 mean_circ: 0.943935
Ran for 170050 frames Cell Events: 6290 mean_circ: 0.943867
Ran for 170550 frames Cell Events: 6308 mean_circ: 0.943871
Ran for 171050 frames Cell Events: 6338 mean_circ: 0.943892
Ran for 171550 frames Cell Events: 6355 mean_circ: 0.943887
Ran for 172050 frames Cell Events: 6375 mean_circ: 0.943892
Ran for 173050 frames Cell Events: 6432 mean_circ: 0.943851
Ran for 173550 frames Cell Events: 6446 mean_circ: 0.943822
Ran for 174050 frames Cell Events: 6477 mean_circ: 0.94387
Ran for 175550 frames Cell Events: 6570 mean_circ: 0.943776
Ran for 176550 frames Cell Events: 6644 mean_circ: 0.943531
Ran for 179050 frames Cell Events: 6791 mean_circ: 0.94338
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Ran for 180050 frames Cell Events: 6837 mean_circ: 0.943402
Ran for 180550 frames Cell Events: 6850 mean_circ: 0.943388
Ran for 181050 frames Cell Events: 6869 mean_circ: 0.943348
Ran for 181550 frames Cell Events: 6890 mean_circ: 0.943395
Ran for 182550 frames Cell Events: 6931 mean_circ: 0.943361
Ran for 183050 frames Cell Events: 6958 mean_circ: 0.943357
Ran for 184050 frames Cell Events: 7015 mean_circ: 0.943405
Ran for 184550 frames Cell Events: 7035 mean_circ: 0.943419
Ran for 185550 frames Cell Events: 7099 mean_circ: 0.943464
Ran for 186550 frames Cell Events: 7135 mean_circ: 0.94341
Ran for 187050 frames Cell Events: 7157 mean_circ: 0.943443
Ran for 187550 frames Cell Events: 7181 mean_circ: 0.943435
Ran for 188050 frames Cell Events: 7204 mean_circ: 0.94344
Ran for 188550 frames Cell Events: 7222 mean_circ: 0.943439
Ran for 189050 frames Cell Events: 7234 mean_circ: 0.943431
Ran for 190550 frames Cell Events: 7284 mean_circ: 0.943387
Ran for 191050 frames Cell Events: 7298 mean_circ: 0.943405
Ran for 191550 frames Cell Events: 7312 mean_circ: 0.943374
Ran for 192550 frames Cell Events: 7359 mean_circ: 0.943386
Ran for 193050 frames Cell Events: 7372 mean_circ: 0.943366
Ran for 194050 frames Cell Events: 7408 mean_circ: 0.943329
Ran for 195050 frames Cell Events: 7442 mean_circ: 0.943336
Ran for 195550 frames Cell Events: 7459 mean_circ: 0.943359
Ran for 196050 frames Cell Events: 7479 mean_circ: 0.943383
Ran for 196550 frames Cell Events: 7493 mean_circ: 0.943397
Ran for 197050 frames Cell Events: 7508 mean_circ: 0.943399
Ran for 198050 frames Cell Events: 7544 mean_circ: 0.943388
Ran for 199050 frames Cell Events: 7585 mean_circ: 0.943427
Ran for 200050 frames Cell Events: 7623 mean_circ: 0.943336
Ran for 200550 frames Cell Events: 7649 mean_circ: 0.943358
Ran for 201050 frames Cell Events: 7661 mean_circ: 0.943349
Ran for 201550 frames Cell Events: 7672 mean_circ: 0.943349
Ran for 203050 frames Cell Events: 7728 mean_circ: 0.943373
Ran for 203550 frames Cell Events: 7744 mean_circ: 0.943382
Ran for 204550 frames Cell Events: 7779 mean_circ: 0.943369
Ran for 205050 frames Cell Events: 7794 mean_circ: 0.943351
Ran for 206050 frames Cell Events: 7825 mean_circ: 0.943344
Ran for 206550 frames Cell Events: 7850 mean_circ: 0.94333
Ran for 207050 frames Cell Events: 7867 mean_circ: 0.943358
Ran for 207550 frames Cell Events: 7885 mean_circ: 0.943368
Ran for 208050 frames Cell Events: 7898 mean_circ: 0.943362
Ran for 208550 frames Cell Events: 7922 mean_circ: 0.943378
Ran for 209050 frames Cell Events: 7941 mean_circ: 0.943336
Ran for 209550 frames Cell Events: 7954 mean_circ: 0.943298
Ran for 210050 frames Cell Events: 7969 mean_circ: 0.943293
Ran for 210550 frames Cell Events: 7979 mean_circ: 0.943321
Ran for 211050 frames Cell Events: 7998 mean_circ: 0.94331
Ran for 211550 frames Cell Events: 8023 mean_circ: 0.943322
Ran for 212050 frames Cell Events: 8032 mean_circ: 0.943332
Ran for 212550 frames Cell Events: 8043 mean_circ: 0.943321
Ran for 213550 frames Cell Events: 8077 mean_circ: 0.943326
Ran for 214550 frames Cell Events: 8121 mean_circ: 0.94335
Ran for 215550 frames Cell Events: 8162 mean_circ: 0.943403
Ran for 216050 frames Cell Events: 8178 mean_circ: 0.943378
Ran for 216550 frames Cell Events: 8195 mean_circ: 0.943407
Ran for 218550 frames Cell Events: 8294 mean_circ: 0.943476
Ran for 219050 frames Cell Events: 8308 mean_circ: 0.94348
Ran for 219550 frames Cell Events: 8326 mean_circ: 0.943455
Ran for 220550 frames Cell Events: 8358 mean_circ: 0.943479
Ran for 221050 frames Cell Events: 8380 mean_circ: 0.943488
Ran for 221550 frames Cell Events: 8398 mean_circ: 0.943465
Ran for 222550 frames Cell Events: 8434 mean_circ: 0.943484
Ran for 223550 frames Cell Events: 8480 mean_circ: 0.943539
Ran for 224050 frames Cell Events: 8499 mean_circ: 0.943526
Ran for 224550 frames Cell Events: 8522 mean_circ: 0.943553
Ran for 225050 frames Cell Events: 8536 mean_circ: 0.943555
Ran for 225550 frames Cell Events: 8552 mean_circ: 0.943555
Ran for 226050 frames Cell Events: 8576 mean_circ: 0.943551
Ran for 226550 frames Cell Events: 8603 mean_circ: 0.943543
Ran for 227050 frames Cell Events: 8630 mean_circ: 0.943521
Ran for 227550 frames Cell Events: 8650 mean_circ: 0.943498
Ran for 228050 frames Cell Events: 8671 mean_circ: 0.943492
Ran for 229050 frames Cell Events: 8705 mean_circ: 0.94345
Ran for 229550 frames Cell Events: 8730 mean_circ: 0.943446
Ran for 230050 frames Cell Events: 8745 mean_circ: 0.943402
Ran for 231050 frames Cell Events: 8781 mean_circ: 0.943416
Ran for 231550 frames Cell Events: 8793 mean_circ: 0.943424
Ran for 232050 frames Cell Events: 8816 mean_circ: 0.943426
Ran for 232550 frames Cell Events: 8828 mean_circ: 0.943427
Ran for 233050 frames Cell Events: 8844 mean_circ: 0.943425
Ran for 233550 frames Cell Events: 8854 mean_circ: 0.943414
Ran for 234550 frames Cell Events: 8880 mean_circ: 0.94343
Ran for 235050 frames Cell Events: 8898 mean_circ: 0.943437
Ran for 235550 frames Cell Events: 8914 mean_circ: 0.943375
Ran for 236050 frames Cell Events: 8938 mean_circ: 0.943376
Ran for 237050 frames Cell Events: 8980 mean_circ: 0.943389
Ran for 238050 frames Cell Events: 9020 mean_circ: 0.94342
Ran for 238550 frames Cell Events: 9034 mean_circ: 0.94342
Ran for 239050 frames Cell Events: 9055 mean_circ: 0.943429
Ran for 239550 frames Cell Events: 9070 mean_circ: 0.943426
Ran for 241050 frames Cell Events: 9120 mean_circ: 0.943439
Ran for 241550 frames Cell Events: 9132 mean_circ: 0.943439
Ran for 242050 frames Cell Events: 9152 mean_circ: 0.943427
Ran for 242550 frames Cell Events: 9170 mean_circ: 0.943446
Ran for 243050 frames Cell Events: 9191 mean_circ: 0.943458
Ran for 243550 frames Cell Events: 9209 mean_circ: 0.943481
Ran for 244050 frames Cell Events: 9225 mean_circ: 0.943462
Ran for 244550 frames Cell Events: 9253 mean_circ: 0.9435
Ran for 246050 frames Cell Events: 9292 mean_circ: 0.943518
Ran for 247050 frames Cell Events: 9330 mean_circ: 0.943536
Ran for 248550 frames Cell Events: 9398 mean_circ: 0.943493
Ran for 249050 frames Cell Events: 9412 mean_circ: 0.943513
Ran for 249550 frames Cell Events: 9439 mean_circ: 0.94348
Ran for 250050 frames Cell Events: 9451 mean_circ: 0.94348
Ran for 250550 frames Cell Events: 9464 mean_circ: 0.943482
Ran for 251050 frames Cell Events: 9479 mean_circ: 0.943485
Ran for 251550 frames Cell Events: 9501 mean_circ: 0.943507
Ran for 252050 frames Cell Events: 9518 mean_circ: 0.943498
Ran for 253050 frames Cell Events: 9555 mean_circ: 0.943512
Ran for 253550 frames Cell Events: 9577 mean_circ: 0.943501
Ran for 254050 frames Cell Events: 9599 mean_circ: 0.943453
Ran for 254550 frames Cell Events: 9613 mean_circ: 0.943444
Ran for 255050 frames Cell Events: 9627 mean_circ: 0.943448
Ran for 255550 frames Cell Events: 9645 mean_circ: 0.943437
Ran for 256050 frames Cell Events: 9656 mean_circ: 0.943449
Ran for 256550 frames Cell Events: 9674 mean_circ: 0.943447
Ran for 257050 frames Cell Events: 9688 mean_circ: 0.943444
Ran for 258550 frames Cell Events: 9737 mean_circ: 0.943427
Ran for 260050 frames Cell Events: 9797 mean_circ: 0.94342
Ran for 260550 frames Cell Events: 9813 mean_circ: 0.94343
Ran for 261050 frames Cell Events: 9839 mean_circ: 0.943443
Ran for 262050 frames Cell Events: 9892 mean_circ: 0.943431
Ran for 262550 frames Cell Events: 9912 mean_circ: 0.943408
Ran for 263050 frames Cell Events: 9939 mean_circ: 0.943387
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 5.61622e+008
****************************************
Measurement finished
Mean Circularitiy: 0.943437
Mean Area: 613.597
Mean FL-1 intensity: 4114.91
Mean FL-2 intensity: 4266.49
Mean FL-3 intensity: 0
frames processed: 261919
Total Time: 132322ms
Number of Runs (new bg img) 0
Frames collected: 264479
Skipped frames: 30968
Rescued Frames: 1672581
Samples DAQ: 66120672
Samples written: 132240108
Samples per Channel: 66120054
FPS: 1998.75
Samples per second: 499691
Expected samples/s: 500000
Events: 10001
Events per second: 75.5808
jumped back (PMT): 7023
#Frames read, frequency
# 0 frames :372766
# 1 frames :135623
# 2 frames :6319
# 3 frames :1776
# 4 frames :974
# 5 frames :602
# 6 frames :2298
# 7 frames :2859
# 8 frames :1397
# 9 frames :792
# 10 frames :847
# 11 frames :498
# 12 frames :424
# 13 frames :305
# 14 frames :298
# 15 frames :232
# 16 frames :181
# 17 frames :129
# 18 frames :111
# 19 frames :75
# 20 frames :50
# 21 frames :60
# 22 frames :36
# 23 frames :37
# 24 frames :33
# 25 frames :32
# 26 frames :20
# 27 frames :29
# 28 frames :16
# 29 frames :13
# 30 frames :10
# 31 frames :4
# 32 frames :10
# 33 frames :2
# 34 frames :8
# 35 frames :4
# 36 frames :8
# 37 frames :5
# 38 frames :2
# 39 frames :4
# 40 frames :2
# 41 frames :2
# 42 frames :4
# 45 frames :3
# 46 frames :2
# 47 frames :1
# 52 frames :1
# 56 frames :2
# 61 frames :2
# 65 frames :1
# 70 frames :1
# 72 frames :1
# 77 frames :1
# 82 frames :1
# 84 frames :1
# 86 frames :1
# 87 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7916
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0