Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_19.41.35
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "5834d951137a93195110471755ce4769",
"name": "M1_20170620_1553_dsRNA_T8_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:41:56"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8159 (max 8160) in '8159'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8985
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.64181e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 15 mean_circ: 0.937007
Ran for 1050 frames Cell Events: 23 mean_circ: 0.935985
Ran for 1550 frames Cell Events: 38 mean_circ: 0.933254
Ran for 2050 frames Cell Events: 57 mean_circ: 0.932155
Ran for 4050 frames Cell Events: 131 mean_circ: 0.933318
Ran for 5050 frames Cell Events: 166 mean_circ: 0.934374
Ran for 6550 frames Cell Events: 204 mean_circ: 0.933218
Ran for 7050 frames Cell Events: 219 mean_circ: 0.935644
Ran for 7550 frames Cell Events: 236 mean_circ: 0.935937
Ran for 8050 frames Cell Events: 249 mean_circ: 0.934586
Ran for 8550 frames Cell Events: 264 mean_circ: 0.934625
Ran for 9050 frames Cell Events: 283 mean_circ: 0.934671
Ran for 9550 frames Cell Events: 294 mean_circ: 0.935363
Ran for 10050 frames Cell Events: 306 mean_circ: 0.935497
Ran for 10550 frames Cell Events: 326 mean_circ: 0.935566
Ran for 11050 frames Cell Events: 341 mean_circ: 0.93576
Ran for 13050 frames Cell Events: 421 mean_circ: 0.936524
Ran for 14050 frames Cell Events: 458 mean_circ: 0.9362
Ran for 14550 frames Cell Events: 476 mean_circ: 0.935903
Ran for 15050 frames Cell Events: 490 mean_circ: 0.936299
Ran for 15550 frames Cell Events: 512 mean_circ: 0.936019
Ran for 16050 frames Cell Events: 528 mean_circ: 0.935608
Ran for 16550 frames Cell Events: 548 mean_circ: 0.935931
Ran for 17050 frames Cell Events: 561 mean_circ: 0.936188
Ran for 18050 frames Cell Events: 596 mean_circ: 0.935679
Ran for 19050 frames Cell Events: 626 mean_circ: 0.936074
Ran for 19550 frames Cell Events: 643 mean_circ: 0.935869
Ran for 20050 frames Cell Events: 664 mean_circ: 0.935924
Ran for 21050 frames Cell Events: 708 mean_circ: 0.936206
Ran for 21550 frames Cell Events: 738 mean_circ: 0.935883
Ran for 22550 frames Cell Events: 776 mean_circ: 0.935819
Ran for 23050 frames Cell Events: 800 mean_circ: 0.935946
Ran for 23550 frames Cell Events: 815 mean_circ: 0.936217
Ran for 24050 frames Cell Events: 828 mean_circ: 0.936331
Ran for 24550 frames Cell Events: 838 mean_circ: 0.936288
Ran for 26050 frames Cell Events: 886 mean_circ: 0.936679
Ran for 26550 frames Cell Events: 901 mean_circ: 0.936694
Ran for 27050 frames Cell Events: 926 mean_circ: 0.936477
Ran for 27550 frames Cell Events: 936 mean_circ: 0.936263
Ran for 28050 frames Cell Events: 950 mean_circ: 0.93632
Ran for 28550 frames Cell Events: 991 mean_circ: 0.93639
Ran for 29050 frames Cell Events: 1010 mean_circ: 0.93654
Ran for 29550 frames Cell Events: 1027 mean_circ: 0.936576
Ran for 30050 frames Cell Events: 1043 mean_circ: 0.936645
Ran for 30550 frames Cell Events: 1066 mean_circ: 0.936666
Ran for 31550 frames Cell Events: 1126 mean_circ: 0.936431
Ran for 32050 frames Cell Events: 1144 mean_circ: 0.936469
Ran for 32550 frames Cell Events: 1166 mean_circ: 0.936536
Ran for 33050 frames Cell Events: 1182 mean_circ: 0.936774
Ran for 34050 frames Cell Events: 1203 mean_circ: 0.936946
Ran for 35050 frames Cell Events: 1239 mean_circ: 0.936844
Ran for 36050 frames Cell Events: 1275 mean_circ: 0.936835
Ran for 38050 frames Cell Events: 1330 mean_circ: 0.936955
Ran for 39050 frames Cell Events: 1368 mean_circ: 0.93703
Ran for 40050 frames Cell Events: 1396 mean_circ: 0.936947
Ran for 42550 frames Cell Events: 1471 mean_circ: 0.936828
Ran for 43550 frames Cell Events: 1506 mean_circ: 0.936668
Ran for 45050 frames Cell Events: 1576 mean_circ: 0.936807
Ran for 45550 frames Cell Events: 1593 mean_circ: 0.936937
Ran for 46050 frames Cell Events: 1608 mean_circ: 0.936719
Ran for 46550 frames Cell Events: 1626 mean_circ: 0.936739
Ran for 47050 frames Cell Events: 1651 mean_circ: 0.936918
Ran for 47550 frames Cell Events: 1665 mean_circ: 0.936878
Ran for 48050 frames Cell Events: 1678 mean_circ: 0.936646
Ran for 49050 frames Cell Events: 1717 mean_circ: 0.936664
Ran for 49550 frames Cell Events: 1731 mean_circ: 0.936633
Ran for 50050 frames Cell Events: 1746 mean_circ: 0.936711
Ran for 51050 frames Cell Events: 1779 mean_circ: 0.936748
Ran for 51550 frames Cell Events: 1798 mean_circ: 0.936839
Ran for 52050 frames Cell Events: 1813 mean_circ: 0.936815
Ran for 52550 frames Cell Events: 1823 mean_circ: 0.936841
Ran for 53050 frames Cell Events: 1845 mean_circ: 0.937006
Ran for 53550 frames Cell Events: 1869 mean_circ: 0.937115
Ran for 54550 frames Cell Events: 1900 mean_circ: 0.937021
Ran for 55050 frames Cell Events: 1917 mean_circ: 0.937072
Ran for 56050 frames Cell Events: 1944 mean_circ: 0.937084
Ran for 57050 frames Cell Events: 1984 mean_circ: 0.937144
Ran for 59050 frames Cell Events: 2042 mean_circ: 0.937351
Ran for 59550 frames Cell Events: 2068 mean_circ: 0.937308
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Ran for 61050 frames Cell Events: 2114 mean_circ: 0.937339
Ran for 61550 frames Cell Events: 2136 mean_circ: 0.937224
Ran for 62050 frames Cell Events: 2161 mean_circ: 0.937257
Ran for 63050 frames Cell Events: 2200 mean_circ: 0.937292
Ran for 63550 frames Cell Events: 2221 mean_circ: 0.93733
Ran for 65550 frames Cell Events: 2290 mean_circ: 0.937481
Ran for 66050 frames Cell Events: 2313 mean_circ: 0.93764
Ran for 66550 frames Cell Events: 2341 mean_circ: 0.937513
Ran for 67050 frames Cell Events: 2355 mean_circ: 0.937531
Ran for 67550 frames Cell Events: 2368 mean_circ: 0.937337
Ran for 68050 frames Cell Events: 2381 mean_circ: 0.937381
Ran for 69050 frames Cell Events: 2419 mean_circ: 0.937315
Ran for 69550 frames Cell Events: 2439 mean_circ: 0.937276
Ran for 70050 frames Cell Events: 2463 mean_circ: 0.937398
Ran for 70550 frames Cell Events: 2478 mean_circ: 0.937379
Ran for 71050 frames Cell Events: 2501 mean_circ: 0.937365
Ran for 71550 frames Cell Events: 2522 mean_circ: 0.937354
Ran for 72550 frames Cell Events: 2558 mean_circ: 0.937359
Ran for 73050 frames Cell Events: 2578 mean_circ: 0.937373
Ran for 73550 frames Cell Events: 2607 mean_circ: 0.937415
Ran for 74050 frames Cell Events: 2618 mean_circ: 0.937433
Ran for 75550 frames Cell Events: 2669 mean_circ: 0.937527
Ran for 76550 frames Cell Events: 2712 mean_circ: 0.937483
Ran for 77050 frames Cell Events: 2727 mean_circ: 0.937351
Ran for 78550 frames Cell Events: 2781 mean_circ: 0.937204
Ran for 79050 frames Cell Events: 2804 mean_circ: 0.937266
Ran for 79550 frames Cell Events: 2822 mean_circ: 0.937339
Ran for 80050 frames Cell Events: 2835 mean_circ: 0.937371
Ran for 81050 frames Cell Events: 2865 mean_circ: 0.937475
Ran for 81550 frames Cell Events: 2884 mean_circ: 0.937537
Ran for 82050 frames Cell Events: 2894 mean_circ: 0.937561
Ran for 82550 frames Cell Events: 2918 mean_circ: 0.937551
Ran for 83550 frames Cell Events: 2958 mean_circ: 0.937463
Ran for 84050 frames Cell Events: 2973 mean_circ: 0.937484
Ran for 84550 frames Cell Events: 2991 mean_circ: 0.937355
Ran for 85050 frames Cell Events: 3006 mean_circ: 0.937378
Ran for 85550 frames Cell Events: 3019 mean_circ: 0.93745
Ran for 86050 frames Cell Events: 3034 mean_circ: 0.937494
Ran for 86550 frames Cell Events: 3049 mean_circ: 0.937466
Ran for 88550 frames Cell Events: 3119 mean_circ: 0.937465
Ran for 89050 frames Cell Events: 3128 mean_circ: 0.937445
Ran for 89550 frames Cell Events: 3144 mean_circ: 0.937478
Ran for 90050 frames Cell Events: 3162 mean_circ: 0.937539
Ran for 90550 frames Cell Events: 3177 mean_circ: 0.937561
Ran for 92550 frames Cell Events: 3262 mean_circ: 0.937612
Ran for 93050 frames Cell Events: 3270 mean_circ: 0.937605
Ran for 93550 frames Cell Events: 3291 mean_circ: 0.937643
Ran for 94550 frames Cell Events: 3318 mean_circ: 0.937738
Ran for 95050 frames Cell Events: 3336 mean_circ: 0.937825
Ran for 96550 frames Cell Events: 3401 mean_circ: 0.937817
Ran for 98550 frames Cell Events: 3477 mean_circ: 0.938022
Ran for 99050 frames Cell Events: 3497 mean_circ: 0.937995
Ran for 99550 frames Cell Events: 3515 mean_circ: 0.937947
Ran for 100050 frames Cell Events: 3530 mean_circ: 0.937935
Ran for 100550 frames Cell Events: 3555 mean_circ: 0.937932
Ran for 101050 frames Cell Events: 3580 mean_circ: 0.937947
Ran for 102050 frames Cell Events: 3619 mean_circ: 0.937996
Ran for 105050 frames Cell Events: 3717 mean_circ: 0.937871
Ran for 106050 frames Cell Events: 3759 mean_circ: 0.937858
Ran for 107050 frames Cell Events: 3796 mean_circ: 0.937791
Ran for 108550 frames Cell Events: 3859 mean_circ: 0.937788
Ran for 109050 frames Cell Events: 3877 mean_circ: 0.937658
Ran for 109550 frames Cell Events: 3901 mean_circ: 0.937716
Ran for 110050 frames Cell Events: 3923 mean_circ: 0.937706
Ran for 111050 frames Cell Events: 3953 mean_circ: 0.937679
Ran for 111550 frames Cell Events: 3970 mean_circ: 0.937699
Ran for 112050 frames Cell Events: 3991 mean_circ: 0.937705
Ran for 113050 frames Cell Events: 4031 mean_circ: 0.937632
Ran for 114050 frames Cell Events: 4060 mean_circ: 0.937773
Ran for 114550 frames Cell Events: 4077 mean_circ: 0.937805
Ran for 115050 frames Cell Events: 4096 mean_circ: 0.937814
Ran for 115550 frames Cell Events: 4122 mean_circ: 0.937763
Ran for 116050 frames Cell Events: 4137 mean_circ: 0.937843
Ran for 116550 frames Cell Events: 4153 mean_circ: 0.937745
Ran for 117050 frames Cell Events: 4169 mean_circ: 0.937753
Ran for 117550 frames Cell Events: 4177 mean_circ: 0.93769
Ran for 118050 frames Cell Events: 4196 mean_circ: 0.937653
Ran for 119050 frames Cell Events: 4242 mean_circ: 0.937699
Ran for 119550 frames Cell Events: 4261 mean_circ: 0.937743
Ran for 120550 frames Cell Events: 4306 mean_circ: 0.937728
Ran for 121050 frames Cell Events: 4326 mean_circ: 0.937768
Ran for 121550 frames Cell Events: 4343 mean_circ: 0.937753
Ran for 123050 frames Cell Events: 4409 mean_circ: 0.937818
Ran for 124550 frames Cell Events: 4480 mean_circ: 0.937879
Ran for 128050 frames Cell Events: 4632 mean_circ: 0.937865
Ran for 129550 frames Cell Events: 4678 mean_circ: 0.93783
Ran for 130050 frames Cell Events: 4697 mean_circ: 0.937811
Ran for 130550 frames Cell Events: 4708 mean_circ: 0.937822
Ran for 131050 frames Cell Events: 4726 mean_circ: 0.937838
Ran for 131550 frames Cell Events: 4747 mean_circ: 0.937858
Ran for 132050 frames Cell Events: 4755 mean_circ: 0.937875
Ran for 132550 frames Cell Events: 4779 mean_circ: 0.937883
Ran for 133050 frames Cell Events: 4798 mean_circ: 0.937846
Ran for 133550 frames Cell Events: 4823 mean_circ: 0.937836
Ran for 134050 frames Cell Events: 4837 mean_circ: 0.937853
Ran for 134550 frames Cell Events: 4845 mean_circ: 0.937867
Ran for 135050 frames Cell Events: 4866 mean_circ: 0.937811
Ran for 135550 frames Cell Events: 4885 mean_circ: 0.937852
Ran for 136550 frames Cell Events: 4924 mean_circ: 0.937859
Ran for 137550 frames Cell Events: 4964 mean_circ: 0.937876
Ran for 138050 frames Cell Events: 4983 mean_circ: 0.93791
Ran for 138550 frames Cell Events: 4997 mean_circ: 0.937902
Ran for 139050 frames Cell Events: 5016 mean_circ: 0.937936
Ran for 139550 frames Cell Events: 5031 mean_circ: 0.937956
Ran for 140050 frames Cell Events: 5050 mean_circ: 0.937948
Ran for 141050 frames Cell Events: 5085 mean_circ: 0.93793
Ran for 142050 frames Cell Events: 5119 mean_circ: 0.937987
Ran for 143050 frames Cell Events: 5155 mean_circ: 0.938019
Ran for 143550 frames Cell Events: 5171 mean_circ: 0.938064
Ran for 144050 frames Cell Events: 5189 mean_circ: 0.93806
Ran for 144550 frames Cell Events: 5211 mean_circ: 0.938077
Ran for 145550 frames Cell Events: 5248 mean_circ: 0.938127
Ran for 146550 frames Cell Events: 5291 mean_circ: 0.938144
Ran for 147050 frames Cell Events: 5317 mean_circ: 0.938135
Ran for 147550 frames Cell Events: 5335 mean_circ: 0.93807
Ran for 148550 frames Cell Events: 5402 mean_circ: 0.938072
Ran for 149050 frames Cell Events: 5424 mean_circ: 0.938118
Ran for 149550 frames Cell Events: 5444 mean_circ: 0.938124
Ran for 151550 frames Cell Events: 5528 mean_circ: 0.938122
Ran for 152050 frames Cell Events: 5549 mean_circ: 0.938156
Ran for 153050 frames Cell Events: 5585 mean_circ: 0.938177
Ran for 153550 frames Cell Events: 5601 mean_circ: 0.938148
Ran for 155550 frames Cell Events: 5665 mean_circ: 0.938092
Ran for 156550 frames Cell Events: 5698 mean_circ: 0.938091
Ran for 157050 frames Cell Events: 5717 mean_circ: 0.938045
Ran for 157550 frames Cell Events: 5738 mean_circ: 0.938045
Ran for 158550 frames Cell Events: 5784 mean_circ: 0.938008
Ran for 159050 frames Cell Events: 5800 mean_circ: 0.938036
Ran for 159550 frames Cell Events: 5825 mean_circ: 0.938023
Ran for 160050 frames Cell Events: 5837 mean_circ: 0.937999
Ran for 160550 frames Cell Events: 5859 mean_circ: 0.937995
Ran for 162550 frames Cell Events: 5918 mean_circ: 0.938093
Ran for 163050 frames Cell Events: 5933 mean_circ: 0.938042
Ran for 164550 frames Cell Events: 6003 mean_circ: 0.938005
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Ran for 166050 frames Cell Events: 6061 mean_circ: 0.938027
Ran for 166550 frames Cell Events: 6085 mean_circ: 0.93805
Ran for 167050 frames Cell Events: 6100 mean_circ: 0.938049
Ran for 167550 frames Cell Events: 6108 mean_circ: 0.938028
Ran for 168550 frames Cell Events: 6147 mean_circ: 0.93805
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Ran for 171550 frames Cell Events: 6240 mean_circ: 0.938073
Ran for 172050 frames Cell Events: 6259 mean_circ: 0.93802
Ran for 172550 frames Cell Events: 6277 mean_circ: 0.938066
Ran for 173050 frames Cell Events: 6301 mean_circ: 0.938054
Ran for 174550 frames Cell Events: 6352 mean_circ: 0.938071
Ran for 175050 frames Cell Events: 6376 mean_circ: 0.938108
Ran for 175550 frames Cell Events: 6390 mean_circ: 0.938084
Ran for 176050 frames Cell Events: 6419 mean_circ: 0.938059
Ran for 177050 frames Cell Events: 6459 mean_circ: 0.93798
Ran for 177550 frames Cell Events: 6480 mean_circ: 0.937975
Ran for 178050 frames Cell Events: 6494 mean_circ: 0.937968
Ran for 179050 frames Cell Events: 6523 mean_circ: 0.938002
Ran for 179550 frames Cell Events: 6541 mean_circ: 0.938019
Ran for 180050 frames Cell Events: 6558 mean_circ: 0.938044
Ran for 180550 frames Cell Events: 6579 mean_circ: 0.938023
Ran for 181050 frames Cell Events: 6607 mean_circ: 0.93794
Ran for 181550 frames Cell Events: 6626 mean_circ: 0.937926
Ran for 182050 frames Cell Events: 6641 mean_circ: 0.93796
Ran for 183050 frames Cell Events: 6671 mean_circ: 0.937952
Ran for 185050 frames Cell Events: 6729 mean_circ: 0.937844
Ran for 185550 frames Cell Events: 6740 mean_circ: 0.937851
Ran for 186050 frames Cell Events: 6760 mean_circ: 0.937865
Ran for 186550 frames Cell Events: 6779 mean_circ: 0.937849
Ran for 187050 frames Cell Events: 6799 mean_circ: 0.937886
Ran for 188550 frames Cell Events: 6847 mean_circ: 0.937855
Ran for 189050 frames Cell Events: 6863 mean_circ: 0.937866
Ran for 189550 frames Cell Events: 6882 mean_circ: 0.937823
Ran for 190050 frames Cell Events: 6899 mean_circ: 0.937844
Ran for 190550 frames Cell Events: 6927 mean_circ: 0.937819
Ran for 191050 frames Cell Events: 6945 mean_circ: 0.937802
Ran for 191550 frames Cell Events: 6965 mean_circ: 0.937772
Ran for 192050 frames Cell Events: 6974 mean_circ: 0.937751
Ran for 192550 frames Cell Events: 6991 mean_circ: 0.937681
Ran for 193550 frames Cell Events: 7016 mean_circ: 0.937682
Ran for 194050 frames Cell Events: 7030 mean_circ: 0.93769
Ran for 195050 frames Cell Events: 7048 mean_circ: 0.937686
Ran for 195550 frames Cell Events: 7064 mean_circ: 0.937637
Ran for 196050 frames Cell Events: 7079 mean_circ: 0.937609
Ran for 197050 frames Cell Events: 7112 mean_circ: 0.937614
Ran for 197550 frames Cell Events: 7134 mean_circ: 0.937576
Ran for 198050 frames Cell Events: 7151 mean_circ: 0.937592
Ran for 199550 frames Cell Events: 7207 mean_circ: 0.93754
Ran for 200050 frames Cell Events: 7220 mean_circ: 0.937537
Ran for 200550 frames Cell Events: 7235 mean_circ: 0.937507
Ran for 201050 frames Cell Events: 7247 mean_circ: 0.937498
Ran for 201550 frames Cell Events: 7266 mean_circ: 0.937438
Ran for 202050 frames Cell Events: 7290 mean_circ: 0.937405
Ran for 202550 frames Cell Events: 7299 mean_circ: 0.937429
Ran for 203550 frames Cell Events: 7351 mean_circ: 0.937357
Ran for 204050 frames Cell Events: 7376 mean_circ: 0.93731
Ran for 204550 frames Cell Events: 7399 mean_circ: 0.93732
Ran for 205050 frames Cell Events: 7423 mean_circ: 0.937308
Ran for 206050 frames Cell Events: 7455 mean_circ: 0.937317
Ran for 207550 frames Cell Events: 7511 mean_circ: 0.93728
Ran for 208550 frames Cell Events: 7553 mean_circ: 0.93732
Ran for 209050 frames Cell Events: 7570 mean_circ: 0.937327
Ran for 209550 frames Cell Events: 7589 mean_circ: 0.937341
Ran for 210050 frames Cell Events: 7602 mean_circ: 0.937341
Ran for 211050 frames Cell Events: 7647 mean_circ: 0.937336
Ran for 211550 frames Cell Events: 7661 mean_circ: 0.937334
Ran for 212050 frames Cell Events: 7677 mean_circ: 0.937343
Ran for 213550 frames Cell Events: 7737 mean_circ: 0.93737
Ran for 214050 frames Cell Events: 7753 mean_circ: 0.93735
Ran for 214550 frames Cell Events: 7761 mean_circ: 0.937364
Ran for 215550 frames Cell Events: 7791 mean_circ: 0.937379
Ran for 218550 frames Cell Events: 7895 mean_circ: 0.937333
Ran for 219050 frames Cell Events: 7908 mean_circ: 0.937307
Ran for 219550 frames Cell Events: 7927 mean_circ: 0.93731
Ran for 220050 frames Cell Events: 7942 mean_circ: 0.937287
Ran for 220550 frames Cell Events: 7961 mean_circ: 0.937286
Ran for 221050 frames Cell Events: 7978 mean_circ: 0.937296
Ran for 221550 frames Cell Events: 8004 mean_circ: 0.937308
Ran for 222050 frames Cell Events: 8031 mean_circ: 0.93733
Ran for 223050 frames Cell Events: 8064 mean_circ: 0.937359
Ran for 223550 frames Cell Events: 8078 mean_circ: 0.937356
Ran for 224050 frames Cell Events: 8096 mean_circ: 0.937346
Ran for 224550 frames Cell Events: 8116 mean_circ: 0.937351
Ran for 225050 frames Cell Events: 8130 mean_circ: 0.937321
Ran for 225550 frames Cell Events: 8142 mean_circ: 0.937339
End this measurment..
Stopping time: 5.64294e+008
****************************************
Measurement finished
Mean Circularitiy: 0.937343
Mean Area: 641.346
Mean FL-1 intensity: 3419.92
Mean FL-2 intensity: 4767.55
Mean FL-3 intensity: 0
frames processed: 224840
Total Time: 113097ms
Number of Runs (new bg img) 0
Frames collected: 226026
Skipped frames: 41435
Rescued Frames: 2306339
Samples DAQ: 56506784
Samples written: 113012796
Samples per Channel: 56506398
FPS: 1998.51
Samples per second: 499627
Expected samples/s: 500000
Events: 8160
Events per second: 72.1503
jumped back (PMT): 18
#Frames read, frequency
# 0 frames :313394
# 1 frames :120851
# 2 frames :5800
# 3 frames :1401
# 4 frames :1034
# 5 frames :327
# 6 frames :1569
# 7 frames :2894
# 8 frames :1338
# 9 frames :872
# 10 frames :634
# 11 frames :341
# 12 frames :360
# 13 frames :271
# 14 frames :186
# 15 frames :158
# 16 frames :135
# 17 frames :96
# 18 frames :80
# 19 frames :41
# 20 frames :28
# 21 frames :32
# 22 frames :24
# 23 frames :28
# 24 frames :18
# 25 frames :18
# 26 frames :13
# 27 frames :11
# 28 frames :3
# 29 frames :4
# 30 frames :12
# 31 frames :3
# 32 frames :3
# 33 frames :3
# 34 frames :2
# 35 frames :3
# 38 frames :1
# 39 frames :3
# 40 frames :1
# 41 frames :1
# 45 frames :1
# 49 frames :1
# 62 frames :1
# 82 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8985
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0