Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_19.48.57
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "c54ad8c46c07f9c549aebb0cdffa8401",
"name": "M1_20170620_1743_dsRNA_T6_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:49:18"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8356 (max 8357) in '8356'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.5481
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.7073e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 12 mean_circ: 0.92987
Ran for 1050 frames Cell Events: 29 mean_circ: 0.942153
Ran for 1550 frames Cell Events: 39 mean_circ: 0.933022
Ran for 2050 frames Cell Events: 50 mean_circ: 0.937572
Ran for 2550 frames Cell Events: 74 mean_circ: 0.937579
Ran for 3050 frames Cell Events: 87 mean_circ: 0.939848
Ran for 3550 frames Cell Events: 102 mean_circ: 0.938739
Ran for 4050 frames Cell Events: 107 mean_circ: 0.938008
Ran for 4550 frames Cell Events: 121 mean_circ: 0.938091
Ran for 5550 frames Cell Events: 141 mean_circ: 0.938902
Ran for 6050 frames Cell Events: 154 mean_circ: 0.938692
Ran for 6550 frames Cell Events: 167 mean_circ: 0.938205
Ran for 7050 frames Cell Events: 180 mean_circ: 0.937573
Ran for 7550 frames Cell Events: 193 mean_circ: 0.938291
Ran for 8550 frames Cell Events: 218 mean_circ: 0.936578
Ran for 9550 frames Cell Events: 242 mean_circ: 0.937444
Ran for 10550 frames Cell Events: 276 mean_circ: 0.937071
Ran for 11050 frames Cell Events: 289 mean_circ: 0.937666
Ran for 11550 frames Cell Events: 308 mean_circ: 0.938175
Ran for 12050 frames Cell Events: 319 mean_circ: 0.937242
Ran for 12550 frames Cell Events: 341 mean_circ: 0.936734
Ran for 13050 frames Cell Events: 352 mean_circ: 0.93706
Ran for 13550 frames Cell Events: 359 mean_circ: 0.936744
Ran for 14050 frames Cell Events: 364 mean_circ: 0.936992
Ran for 15550 frames Cell Events: 399 mean_circ: 0.936886
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Ran for 19050 frames Cell Events: 480 mean_circ: 0.935735
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Ran for 21050 frames Cell Events: 526 mean_circ: 0.935723
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Ran for 23550 frames Cell Events: 595 mean_circ: 0.934981
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Ran for 26550 frames Cell Events: 694 mean_circ: 0.935723
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Ran for 30050 frames Cell Events: 802 mean_circ: 0.935348
Ran for 30550 frames Cell Events: 816 mean_circ: 0.935115
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Ran for 32050 frames Cell Events: 887 mean_circ: 0.935051
Ran for 33050 frames Cell Events: 937 mean_circ: 0.935169
Ran for 34050 frames Cell Events: 968 mean_circ: 0.935165
Ran for 34550 frames Cell Events: 974 mean_circ: 0.935043
Ran for 35050 frames Cell Events: 989 mean_circ: 0.935082
Ran for 36050 frames Cell Events: 1010 mean_circ: 0.935116
Ran for 36550 frames Cell Events: 1019 mean_circ: 0.935352
Ran for 37050 frames Cell Events: 1036 mean_circ: 0.935383
Ran for 37550 frames Cell Events: 1058 mean_circ: 0.935502
Ran for 38050 frames Cell Events: 1070 mean_circ: 0.935463
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Ran for 39050 frames Cell Events: 1095 mean_circ: 0.935278
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Ran for 40050 frames Cell Events: 1121 mean_circ: 0.935059
Ran for 40550 frames Cell Events: 1125 mean_circ: 0.934777
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Ran for 42550 frames Cell Events: 1175 mean_circ: 0.934639
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Ran for 44050 frames Cell Events: 1226 mean_circ: 0.934415
Ran for 44550 frames Cell Events: 1238 mean_circ: 0.934485
Ran for 45050 frames Cell Events: 1254 mean_circ: 0.934216
Ran for 45550 frames Cell Events: 1266 mean_circ: 0.934255
Ran for 46050 frames Cell Events: 1280 mean_circ: 0.934473
Ran for 47050 frames Cell Events: 1315 mean_circ: 0.934335
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Ran for 56550 frames Cell Events: 1587 mean_circ: 0.934085
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Ran for 57550 frames Cell Events: 1606 mean_circ: 0.93388
Ran for 58050 frames Cell Events: 1624 mean_circ: 0.933825
Ran for 58550 frames Cell Events: 1632 mean_circ: 0.933976
Ran for 59550 frames Cell Events: 1664 mean_circ: 0.933878
Ran for 60050 frames Cell Events: 1675 mean_circ: 0.93391
Ran for 60550 frames Cell Events: 1692 mean_circ: 0.934016
Ran for 61050 frames Cell Events: 1699 mean_circ: 0.93409
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Ran for 62050 frames Cell Events: 1718 mean_circ: 0.934027
Ran for 62550 frames Cell Events: 1726 mean_circ: 0.934091
Ran for 63050 frames Cell Events: 1747 mean_circ: 0.934067
Ran for 64050 frames Cell Events: 1775 mean_circ: 0.934219
Ran for 64550 frames Cell Events: 1795 mean_circ: 0.934168
Ran for 65050 frames Cell Events: 1811 mean_circ: 0.934089
Ran for 65550 frames Cell Events: 1827 mean_circ: 0.934094
Ran for 66050 frames Cell Events: 1841 mean_circ: 0.934227
Ran for 66550 frames Cell Events: 1851 mean_circ: 0.934257
Ran for 67050 frames Cell Events: 1858 mean_circ: 0.934317
Ran for 67550 frames Cell Events: 1864 mean_circ: 0.934203
Ran for 68050 frames Cell Events: 1888 mean_circ: 0.934176
Ran for 68550 frames Cell Events: 1907 mean_circ: 0.934153
Ran for 71050 frames Cell Events: 1976 mean_circ: 0.933989
Ran for 71550 frames Cell Events: 1992 mean_circ: 0.933951
Ran for 72050 frames Cell Events: 1999 mean_circ: 0.933901
Ran for 72550 frames Cell Events: 2008 mean_circ: 0.933859
Ran for 73050 frames Cell Events: 2020 mean_circ: 0.933905
Ran for 73550 frames Cell Events: 2029 mean_circ: 0.933959
Ran for 74050 frames Cell Events: 2036 mean_circ: 0.933887
Ran for 74550 frames Cell Events: 2044 mean_circ: 0.933952
Ran for 75550 frames Cell Events: 2070 mean_circ: 0.933914
Ran for 76050 frames Cell Events: 2081 mean_circ: 0.933908
Ran for 76550 frames Cell Events: 2097 mean_circ: 0.933937
Ran for 77050 frames Cell Events: 2107 mean_circ: 0.934067
Ran for 78050 frames Cell Events: 2137 mean_circ: 0.933829
Ran for 79050 frames Cell Events: 2174 mean_circ: 0.933841
Ran for 80050 frames Cell Events: 2207 mean_circ: 0.933719
Ran for 81050 frames Cell Events: 2226 mean_circ: 0.933643
Ran for 81550 frames Cell Events: 2239 mean_circ: 0.933531
Ran for 82050 frames Cell Events: 2249 mean_circ: 0.933495
Ran for 82550 frames Cell Events: 2260 mean_circ: 0.933411
Ran for 83550 frames Cell Events: 2291 mean_circ: 0.93351
Ran for 84550 frames Cell Events: 2318 mean_circ: 0.93359
Ran for 85550 frames Cell Events: 2345 mean_circ: 0.933496
Ran for 86050 frames Cell Events: 2352 mean_circ: 0.933591
Ran for 86550 frames Cell Events: 2364 mean_circ: 0.933687
Ran for 87550 frames Cell Events: 2381 mean_circ: 0.933711
Ran for 88050 frames Cell Events: 2388 mean_circ: 0.933647
Ran for 88550 frames Cell Events: 2397 mean_circ: 0.933684
Ran for 89050 frames Cell Events: 2413 mean_circ: 0.933628
Ran for 89550 frames Cell Events: 2425 mean_circ: 0.933544
Ran for 90050 frames Cell Events: 2434 mean_circ: 0.93357
Ran for 91050 frames Cell Events: 2453 mean_circ: 0.933556
Ran for 92050 frames Cell Events: 2471 mean_circ: 0.933726
Ran for 92550 frames Cell Events: 2492 mean_circ: 0.93374
Ran for 93550 frames Cell Events: 2536 mean_circ: 0.933773
Ran for 94050 frames Cell Events: 2553 mean_circ: 0.933752
Ran for 94550 frames Cell Events: 2572 mean_circ: 0.933865
Ran for 95550 frames Cell Events: 2603 mean_circ: 0.933774
Ran for 96050 frames Cell Events: 2616 mean_circ: 0.933696
Ran for 96550 frames Cell Events: 2630 mean_circ: 0.933755
Ran for 97050 frames Cell Events: 2634 mean_circ: 0.933782
Ran for 97550 frames Cell Events: 2643 mean_circ: 0.933778
Ran for 98550 frames Cell Events: 2669 mean_circ: 0.933729
Ran for 99050 frames Cell Events: 2679 mean_circ: 0.933796
Ran for 100550 frames Cell Events: 2716 mean_circ: 0.933973
Ran for 101050 frames Cell Events: 2733 mean_circ: 0.933957
Ran for 102550 frames Cell Events: 2774 mean_circ: 0.933825
Ran for 103050 frames Cell Events: 2783 mean_circ: 0.93387
Ran for 103550 frames Cell Events: 2790 mean_circ: 0.933857
Ran for 104550 frames Cell Events: 2814 mean_circ: 0.933957
Ran for 105050 frames Cell Events: 2830 mean_circ: 0.934088
Ran for 105550 frames Cell Events: 2842 mean_circ: 0.934195
Ran for 106050 frames Cell Events: 2864 mean_circ: 0.934243
Ran for 106550 frames Cell Events: 2876 mean_circ: 0.934301
Ran for 107050 frames Cell Events: 2889 mean_circ: 0.934386
Ran for 107550 frames Cell Events: 2897 mean_circ: 0.934418
Ran for 108550 frames Cell Events: 2911 mean_circ: 0.934334
Ran for 109050 frames Cell Events: 2922 mean_circ: 0.934279
Ran for 110550 frames Cell Events: 2969 mean_circ: 0.934384
Ran for 111050 frames Cell Events: 2984 mean_circ: 0.934438
Ran for 111550 frames Cell Events: 2996 mean_circ: 0.934261
Ran for 112050 frames Cell Events: 3008 mean_circ: 0.934238
Ran for 112550 frames Cell Events: 3022 mean_circ: 0.934217
Ran for 113050 frames Cell Events: 3036 mean_circ: 0.934278
Ran for 113550 frames Cell Events: 3043 mean_circ: 0.934282
Ran for 114050 frames Cell Events: 3057 mean_circ: 0.934283
Ran for 115550 frames Cell Events: 3105 mean_circ: 0.934401
Ran for 117050 frames Cell Events: 3137 mean_circ: 0.934443
Ran for 117550 frames Cell Events: 3155 mean_circ: 0.934405
Ran for 118050 frames Cell Events: 3160 mean_circ: 0.934491
Ran for 118550 frames Cell Events: 3170 mean_circ: 0.934489
Ran for 119050 frames Cell Events: 3185 mean_circ: 0.934492
Ran for 119550 frames Cell Events: 3197 mean_circ: 0.934548
Ran for 120050 frames Cell Events: 3208 mean_circ: 0.934481
Ran for 121550 frames Cell Events: 3242 mean_circ: 0.934448
Ran for 122050 frames Cell Events: 3250 mean_circ: 0.93447
Ran for 122550 frames Cell Events: 3264 mean_circ: 0.934383
Ran for 123050 frames Cell Events: 3270 mean_circ: 0.934395
Ran for 123550 frames Cell Events: 3289 mean_circ: 0.934419
Ran for 124550 frames Cell Events: 3317 mean_circ: 0.93435
Ran for 125050 frames Cell Events: 3327 mean_circ: 0.934396
Ran for 125550 frames Cell Events: 3336 mean_circ: 0.934448
Ran for 126050 frames Cell Events: 3340 mean_circ: 0.934401
Ran for 127050 frames Cell Events: 3357 mean_circ: 0.934331
Ran for 127550 frames Cell Events: 3362 mean_circ: 0.934343
Ran for 128050 frames Cell Events: 3372 mean_circ: 0.934321
Ran for 128550 frames Cell Events: 3382 mean_circ: 0.934347
Ran for 129050 frames Cell Events: 3396 mean_circ: 0.934449
Ran for 129550 frames Cell Events: 3407 mean_circ: 0.934341
Ran for 130050 frames Cell Events: 3426 mean_circ: 0.934337
Ran for 130550 frames Cell Events: 3440 mean_circ: 0.934377
Ran for 131050 frames Cell Events: 3448 mean_circ: 0.934424
Ran for 132550 frames Cell Events: 3483 mean_circ: 0.934396
Ran for 133050 frames Cell Events: 3496 mean_circ: 0.934315
Ran for 133550 frames Cell Events: 3504 mean_circ: 0.934246
Ran for 134550 frames Cell Events: 3516 mean_circ: 0.934197
Ran for 135050 frames Cell Events: 3527 mean_circ: 0.934184
Ran for 135550 frames Cell Events: 3547 mean_circ: 0.934132
Ran for 136050 frames Cell Events: 3560 mean_circ: 0.934028
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Ran for 139050 frames Cell Events: 3653 mean_circ: 0.93407
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Ran for 140050 frames Cell Events: 3697 mean_circ: 0.934227
Ran for 140550 frames Cell Events: 3719 mean_circ: 0.934231
Ran for 141550 frames Cell Events: 3750 mean_circ: 0.934129
Ran for 142550 frames Cell Events: 3790 mean_circ: 0.934177
Ran for 143050 frames Cell Events: 3800 mean_circ: 0.934049
Ran for 144050 frames Cell Events: 3822 mean_circ: 0.934085
Ran for 144550 frames Cell Events: 3833 mean_circ: 0.934151
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Ran for 145550 frames Cell Events: 3857 mean_circ: 0.934036
Ran for 146050 frames Cell Events: 3868 mean_circ: 0.934048
Ran for 146550 frames Cell Events: 3878 mean_circ: 0.934021
Ran for 147050 frames Cell Events: 3891 mean_circ: 0.934049
Ran for 147550 frames Cell Events: 3900 mean_circ: 0.934094
Ran for 148050 frames Cell Events: 3910 mean_circ: 0.934039
Ran for 148550 frames Cell Events: 3922 mean_circ: 0.934039
Ran for 149050 frames Cell Events: 3936 mean_circ: 0.934095
Ran for 150050 frames Cell Events: 3975 mean_circ: 0.934121
Ran for 151050 frames Cell Events: 4001 mean_circ: 0.93412
Ran for 151550 frames Cell Events: 4017 mean_circ: 0.934043
Ran for 153550 frames Cell Events: 4083 mean_circ: 0.933912
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Ran for 155050 frames Cell Events: 4124 mean_circ: 0.933891
Ran for 156050 frames Cell Events: 4156 mean_circ: 0.933883
Ran for 157550 frames Cell Events: 4192 mean_circ: 0.933972
Ran for 158050 frames Cell Events: 4209 mean_circ: 0.934031
Ran for 158550 frames Cell Events: 4219 mean_circ: 0.934041
Ran for 159050 frames Cell Events: 4237 mean_circ: 0.934131
Ran for 160050 frames Cell Events: 4263 mean_circ: 0.93418
Ran for 160550 frames Cell Events: 4273 mean_circ: 0.934164
Ran for 162050 frames Cell Events: 4303 mean_circ: 0.934215
Ran for 162550 frames Cell Events: 4317 mean_circ: 0.934122
Ran for 163050 frames Cell Events: 4337 mean_circ: 0.934152
Ran for 163550 frames Cell Events: 4347 mean_circ: 0.934144
Ran for 164050 frames Cell Events: 4361 mean_circ: 0.934041
Ran for 164550 frames Cell Events: 4391 mean_circ: 0.934046
Ran for 165050 frames Cell Events: 4399 mean_circ: 0.934003
Ran for 166050 frames Cell Events: 4420 mean_circ: 0.93406
Ran for 166550 frames Cell Events: 4426 mean_circ: 0.934076
Ran for 167050 frames Cell Events: 4436 mean_circ: 0.934056
Ran for 168050 frames Cell Events: 4458 mean_circ: 0.934005
Ran for 168550 frames Cell Events: 4468 mean_circ: 0.933975
Ran for 169550 frames Cell Events: 4498 mean_circ: 0.933993
Ran for 170050 frames Cell Events: 4514 mean_circ: 0.933971
Ran for 170550 frames Cell Events: 4524 mean_circ: 0.933994
Ran for 171050 frames Cell Events: 4543 mean_circ: 0.934068
Ran for 171550 frames Cell Events: 4554 mean_circ: 0.934088
Ran for 172050 frames Cell Events: 4569 mean_circ: 0.934065
Ran for 173050 frames Cell Events: 4586 mean_circ: 0.934026
Ran for 173550 frames Cell Events: 4594 mean_circ: 0.934007
Ran for 175050 frames Cell Events: 4630 mean_circ: 0.934063
Ran for 175550 frames Cell Events: 4651 mean_circ: 0.93401
Ran for 176050 frames Cell Events: 4658 mean_circ: 0.934032
Ran for 176550 frames Cell Events: 4676 mean_circ: 0.934084
Ran for 177050 frames Cell Events: 4693 mean_circ: 0.934069
Ran for 178050 frames Cell Events: 4719 mean_circ: 0.934051
Ran for 178550 frames Cell Events: 4724 mean_circ: 0.934021
Ran for 179550 frames Cell Events: 4746 mean_circ: 0.934037
Ran for 180050 frames Cell Events: 4761 mean_circ: 0.9341
Ran for 180550 frames Cell Events: 4771 mean_circ: 0.934097
Ran for 181050 frames Cell Events: 4781 mean_circ: 0.934104
Ran for 181550 frames Cell Events: 4795 mean_circ: 0.934095
Ran for 182050 frames Cell Events: 4808 mean_circ: 0.934065
Ran for 183050 frames Cell Events: 4823 mean_circ: 0.934101
Ran for 183550 frames Cell Events: 4832 mean_circ: 0.934102
Ran for 184050 frames Cell Events: 4839 mean_circ: 0.934112
Ran for 184550 frames Cell Events: 4843 mean_circ: 0.934129
Ran for 185050 frames Cell Events: 4851 mean_circ: 0.934147
Ran for 185550 frames Cell Events: 4861 mean_circ: 0.934095
Ran for 186050 frames Cell Events: 4870 mean_circ: 0.934118
Ran for 186550 frames Cell Events: 4879 mean_circ: 0.934158
Ran for 187050 frames Cell Events: 4891 mean_circ: 0.934203
Ran for 188050 frames Cell Events: 4919 mean_circ: 0.93422
Ran for 188550 frames Cell Events: 4928 mean_circ: 0.93421
Ran for 189550 frames Cell Events: 4955 mean_circ: 0.934312
Ran for 190050 frames Cell Events: 4963 mean_circ: 0.934331
Ran for 190550 frames Cell Events: 4971 mean_circ: 0.934345
Ran for 191050 frames Cell Events: 4986 mean_circ: 0.934353
Ran for 193550 frames Cell Events: 5068 mean_circ: 0.934214
Ran for 194050 frames Cell Events: 5072 mean_circ: 0.934175
Ran for 195050 frames Cell Events: 5125 mean_circ: 0.934083
Ran for 195550 frames Cell Events: 5146 mean_circ: 0.933988
Ran for 196050 frames Cell Events: 5163 mean_circ: 0.934001
Ran for 197050 frames Cell Events: 5193 mean_circ: 0.93399
Ran for 197550 frames Cell Events: 5198 mean_circ: 0.934038
Ran for 198050 frames Cell Events: 5210 mean_circ: 0.934036
Ran for 200050 frames Cell Events: 5283 mean_circ: 0.934135
Ran for 200550 frames Cell Events: 5302 mean_circ: 0.934127
Ran for 201050 frames Cell Events: 5311 mean_circ: 0.934122
Ran for 201550 frames Cell Events: 5321 mean_circ: 0.934176
Ran for 202050 frames Cell Events: 5328 mean_circ: 0.934178
Ran for 203550 frames Cell Events: 5381 mean_circ: 0.934161
Ran for 204050 frames Cell Events: 5397 mean_circ: 0.934213
Ran for 205050 frames Cell Events: 5426 mean_circ: 0.934248
Ran for 205550 frames Cell Events: 5443 mean_circ: 0.934166
Ran for 206550 frames Cell Events: 5483 mean_circ: 0.934153
Ran for 208550 frames Cell Events: 5534 mean_circ: 0.933953
Ran for 209550 frames Cell Events: 5555 mean_circ: 0.933944
Ran for 210050 frames Cell Events: 5560 mean_circ: 0.933959
Ran for 210550 frames Cell Events: 5574 mean_circ: 0.933928
Ran for 211550 frames Cell Events: 5599 mean_circ: 0.933912
Ran for 212550 frames Cell Events: 5617 mean_circ: 0.933868
Ran for 213550 frames Cell Events: 5638 mean_circ: 0.933885
Ran for 214050 frames Cell Events: 5649 mean_circ: 0.933841
Ran for 214550 frames Cell Events: 5661 mean_circ: 0.933836
Ran for 215050 frames Cell Events: 5670 mean_circ: 0.933844
Ran for 215550 frames Cell Events: 5675 mean_circ: 0.933841
Ran for 216550 frames Cell Events: 5695 mean_circ: 0.933854
Ran for 217050 frames Cell Events: 5704 mean_circ: 0.933873
Ran for 217550 frames Cell Events: 5715 mean_circ: 0.933841
Ran for 219050 frames Cell Events: 5753 mean_circ: 0.933919
Ran for 219550 frames Cell Events: 5762 mean_circ: 0.933924
Ran for 220050 frames Cell Events: 5769 mean_circ: 0.933953
Ran for 221050 frames Cell Events: 5791 mean_circ: 0.933968
Ran for 222050 frames Cell Events: 5812 mean_circ: 0.933886
Ran for 222550 frames Cell Events: 5820 mean_circ: 0.933824
Ran for 223050 frames Cell Events: 5830 mean_circ: 0.93381
Ran for 223550 frames Cell Events: 5844 mean_circ: 0.933841
Ran for 224050 frames Cell Events: 5856 mean_circ: 0.933835
Ran for 224550 frames Cell Events: 5864 mean_circ: 0.93385
Ran for 226050 frames Cell Events: 5912 mean_circ: 0.933786
Ran for 227050 frames Cell Events: 5943 mean_circ: 0.933832
Ran for 228050 frames Cell Events: 5959 mean_circ: 0.933798
Ran for 228550 frames Cell Events: 5970 mean_circ: 0.93384
Ran for 229050 frames Cell Events: 5981 mean_circ: 0.933865
Ran for 230050 frames Cell Events: 6006 mean_circ: 0.933936
Ran for 230550 frames Cell Events: 6021 mean_circ: 0.933961
Ran for 232050 frames Cell Events: 6058 mean_circ: 0.933948
Ran for 232550 frames Cell Events: 6071 mean_circ: 0.933892
Ran for 233050 frames Cell Events: 6079 mean_circ: 0.933876
Ran for 234050 frames Cell Events: 6098 mean_circ: 0.933894
Ran for 234550 frames Cell Events: 6114 mean_circ: 0.933862
Ran for 235050 frames Cell Events: 6130 mean_circ: 0.933861
Ran for 235550 frames Cell Events: 6139 mean_circ: 0.933867
Ran for 236050 frames Cell Events: 6157 mean_circ: 0.933884
Ran for 237550 frames Cell Events: 6206 mean_circ: 0.933923
Ran for 238550 frames Cell Events: 6232 mean_circ: 0.933949
Ran for 239050 frames Cell Events: 6242 mean_circ: 0.933973
Ran for 239550 frames Cell Events: 6252 mean_circ: 0.933958
Ran for 240050 frames Cell Events: 6266 mean_circ: 0.933953
Ran for 241050 frames Cell Events: 6279 mean_circ: 0.933972
Ran for 241550 frames Cell Events: 6297 mean_circ: 0.933978
Ran for 242050 frames Cell Events: 6304 mean_circ: 0.933996
Ran for 242550 frames Cell Events: 6316 mean_circ: 0.933994
Ran for 243050 frames Cell Events: 6328 mean_circ: 0.934017
Ran for 243550 frames Cell Events: 6332 mean_circ: 0.933991
Ran for 244050 frames Cell Events: 6344 mean_circ: 0.93397
Ran for 244550 frames Cell Events: 6346 mean_circ: 0.93398
Ran for 245050 frames Cell Events: 6360 mean_circ: 0.93395
Ran for 245550 frames Cell Events: 6370 mean_circ: 0.933999
Ran for 246050 frames Cell Events: 6373 mean_circ: 0.934014
Ran for 246550 frames Cell Events: 6379 mean_circ: 0.934004
Ran for 247050 frames Cell Events: 6390 mean_circ: 0.933987
Ran for 247550 frames Cell Events: 6401 mean_circ: 0.933919
Ran for 248050 frames Cell Events: 6413 mean_circ: 0.933887
Ran for 248550 frames Cell Events: 6429 mean_circ: 0.933872
Ran for 249050 frames Cell Events: 6438 mean_circ: 0.933815
Ran for 249550 frames Cell Events: 6454 mean_circ: 0.933799
Ran for 250050 frames Cell Events: 6463 mean_circ: 0.933753
Ran for 251050 frames Cell Events: 6498 mean_circ: 0.933765
Ran for 251550 frames Cell Events: 6510 mean_circ: 0.933754
Ran for 252550 frames Cell Events: 6553 mean_circ: 0.933847
Ran for 253050 frames Cell Events: 6566 mean_circ: 0.933859
Ran for 254050 frames Cell Events: 6597 mean_circ: 0.933834
Ran for 255550 frames Cell Events: 6638 mean_circ: 0.933864
Ran for 256550 frames Cell Events: 6667 mean_circ: 0.933799
Ran for 257550 frames Cell Events: 6693 mean_circ: 0.933785
Ran for 258550 frames Cell Events: 6726 mean_circ: 0.933773
Ran for 259050 frames Cell Events: 6745 mean_circ: 0.933796
Ran for 260050 frames Cell Events: 6772 mean_circ: 0.933768
Ran for 260550 frames Cell Events: 6778 mean_circ: 0.933752
Ran for 261050 frames Cell Events: 6785 mean_circ: 0.933733
Ran for 262050 frames Cell Events: 6811 mean_circ: 0.933722
Ran for 262550 frames Cell Events: 6830 mean_circ: 0.933733
Ran for 263050 frames Cell Events: 6846 mean_circ: 0.933715
Ran for 263550 frames Cell Events: 6855 mean_circ: 0.933726
Ran for 264050 frames Cell Events: 6872 mean_circ: 0.93367
Ran for 264550 frames Cell Events: 6888 mean_circ: 0.933584
Ran for 265050 frames Cell Events: 6900 mean_circ: 0.933594
Ran for 265550 frames Cell Events: 6906 mean_circ: 0.933603
Ran for 266050 frames Cell Events: 6918 mean_circ: 0.933625
Ran for 267050 frames Cell Events: 6938 mean_circ: 0.933602
Ran for 268050 frames Cell Events: 6974 mean_circ: 0.933606
Ran for 268550 frames Cell Events: 6979 mean_circ: 0.93364
Ran for 269050 frames Cell Events: 6989 mean_circ: 0.933669
Ran for 269550 frames Cell Events: 7009 mean_circ: 0.933674
Ran for 270050 frames Cell Events: 7022 mean_circ: 0.933684
Ran for 270550 frames Cell Events: 7036 mean_circ: 0.933702
Ran for 271050 frames Cell Events: 7047 mean_circ: 0.933728
Ran for 271550 frames Cell Events: 7061 mean_circ: 0.93376
Ran for 272550 frames Cell Events: 7078 mean_circ: 0.933772
Ran for 273050 frames Cell Events: 7085 mean_circ: 0.933761
Ran for 273550 frames Cell Events: 7092 mean_circ: 0.933783
Ran for 274550 frames Cell Events: 7107 mean_circ: 0.933773
Ran for 275050 frames Cell Events: 7116 mean_circ: 0.933753
Ran for 275550 frames Cell Events: 7127 mean_circ: 0.933791
Ran for 276050 frames Cell Events: 7143 mean_circ: 0.933801
Ran for 276550 frames Cell Events: 7155 mean_circ: 0.933838
Ran for 277050 frames Cell Events: 7166 mean_circ: 0.93388
Ran for 277550 frames Cell Events: 7170 mean_circ: 0.933887
Ran for 278550 frames Cell Events: 7197 mean_circ: 0.933926
Ran for 279550 frames Cell Events: 7223 mean_circ: 0.933954
Ran for 280050 frames Cell Events: 7239 mean_circ: 0.933928
Ran for 280550 frames Cell Events: 7251 mean_circ: 0.933941
Ran for 281050 frames Cell Events: 7260 mean_circ: 0.933941
Ran for 281550 frames Cell Events: 7274 mean_circ: 0.933941
Ran for 282050 frames Cell Events: 7286 mean_circ: 0.933967
Ran for 282550 frames Cell Events: 7296 mean_circ: 0.933986
Ran for 283050 frames Cell Events: 7309 mean_circ: 0.933978
Ran for 283550 frames Cell Events: 7324 mean_circ: 0.933952
Ran for 284050 frames Cell Events: 7334 mean_circ: 0.933916
Ran for 284550 frames Cell Events: 7353 mean_circ: 0.933832
Ran for 286050 frames Cell Events: 7379 mean_circ: 0.933773
Ran for 286550 frames Cell Events: 7392 mean_circ: 0.933801
Ran for 287550 frames Cell Events: 7425 mean_circ: 0.933792
Ran for 288550 frames Cell Events: 7445 mean_circ: 0.933835
Ran for 289050 frames Cell Events: 7455 mean_circ: 0.933839
Ran for 289550 frames Cell Events: 7467 mean_circ: 0.933875
Ran for 290050 frames Cell Events: 7480 mean_circ: 0.933868
Ran for 290550 frames Cell Events: 7491 mean_circ: 0.933889
Ran for 291050 frames Cell Events: 7503 mean_circ: 0.933848
Ran for 292050 frames Cell Events: 7536 mean_circ: 0.933802
Ran for 292550 frames Cell Events: 7545 mean_circ: 0.933797
Ran for 293050 frames Cell Events: 7558 mean_circ: 0.933777
Ran for 294050 frames Cell Events: 7583 mean_circ: 0.933759
Ran for 294550 frames Cell Events: 7596 mean_circ: 0.933792
Ran for 295050 frames Cell Events: 7608 mean_circ: 0.933813
Ran for 295550 frames Cell Events: 7614 mean_circ: 0.933791
Ran for 296050 frames Cell Events: 7637 mean_circ: 0.9338
Ran for 296550 frames Cell Events: 7649 mean_circ: 0.933789
Ran for 297050 frames Cell Events: 7661 mean_circ: 0.933794
Ran for 297550 frames Cell Events: 7679 mean_circ: 0.933801
Ran for 298550 frames Cell Events: 7696 mean_circ: 0.933775
Ran for 299050 frames Cell Events: 7706 mean_circ: 0.933784
Ran for 300050 frames Cell Events: 7733 mean_circ: 0.933732
Ran for 300550 frames Cell Events: 7741 mean_circ: 0.933706
Ran for 301050 frames Cell Events: 7755 mean_circ: 0.933659
Ran for 301550 frames Cell Events: 7766 mean_circ: 0.933664
Ran for 302050 frames Cell Events: 7774 mean_circ: 0.933654
Ran for 302550 frames Cell Events: 7785 mean_circ: 0.933653
Ran for 303050 frames Cell Events: 7793 mean_circ: 0.933625
Ran for 304050 frames Cell Events: 7826 mean_circ: 0.933543
Ran for 304550 frames Cell Events: 7833 mean_circ: 0.93354
Ran for 305550 frames Cell Events: 7856 mean_circ: 0.933555
Ran for 306050 frames Cell Events: 7864 mean_circ: 0.933551
Ran for 307050 frames Cell Events: 7887 mean_circ: 0.933555
Ran for 307550 frames Cell Events: 7904 mean_circ: 0.933595
Ran for 308050 frames Cell Events: 7913 mean_circ: 0.933624
Ran for 309550 frames Cell Events: 7942 mean_circ: 0.933554
Ran for 310050 frames Cell Events: 7954 mean_circ: 0.933556
Ran for 310550 frames Cell Events: 7966 mean_circ: 0.933548
Ran for 311050 frames Cell Events: 7984 mean_circ: 0.933561
Ran for 312050 frames Cell Events: 8016 mean_circ: 0.933582
Ran for 312550 frames Cell Events: 8032 mean_circ: 0.933592
Ran for 313050 frames Cell Events: 8048 mean_circ: 0.93357
Ran for 313550 frames Cell Events: 8057 mean_circ: 0.933576
Ran for 314050 frames Cell Events: 8069 mean_circ: 0.933589
Ran for 314550 frames Cell Events: 8086 mean_circ: 0.933599
Ran for 315550 frames Cell Events: 8112 mean_circ: 0.933645
Ran for 316050 frames Cell Events: 8129 mean_circ: 0.933664
Ran for 316550 frames Cell Events: 8141 mean_circ: 0.933678
Ran for 317050 frames Cell Events: 8149 mean_circ: 0.93367
Ran for 317550 frames Cell Events: 8161 mean_circ: 0.933672
Ran for 318050 frames Cell Events: 8180 mean_circ: 0.933667
Ran for 318550 frames Cell Events: 8188 mean_circ: 0.933681
Ran for 319050 frames Cell Events: 8208 mean_circ: 0.933637
Ran for 319550 frames Cell Events: 8217 mean_circ: 0.93365
Ran for 320550 frames Cell Events: 8248 mean_circ: 0.933622
Ran for 321050 frames Cell Events: 8265 mean_circ: 0.933605
Ran for 321550 frames Cell Events: 8280 mean_circ: 0.933574
Ran for 322050 frames Cell Events: 8293 mean_circ: 0.933559
Ran for 322550 frames Cell Events: 8303 mean_circ: 0.933588
Ran for 323050 frames Cell Events: 8309 mean_circ: 0.933596
Ran for 323550 frames Cell Events: 8323 mean_circ: 0.933608
Ran for 324050 frames Cell Events: 8340 mean_circ: 0.933615
Ran for 324550 frames Cell Events: 8351 mean_circ: 0.933622
End this measurment..
Stopping time: 5.70893e+008
****************************************
Measurement finished
Mean Circularitiy: 0.933645
Mean Area: 656.157
Mean FL-1 intensity: 3814.05
Mean FL-2 intensity: 5298.14
Mean FL-3 intensity: 0
frames processed: 324548
Total Time: 162428ms
Number of Runs (new bg img) 0
Frames collected: 324662
Skipped frames: 62681
Rescued Frames: 3732194
Samples DAQ: 81165584
Samples written: 162331052
Samples per Channel: 81165526
FPS: 1998.8
Samples per second: 499700
Expected samples/s: 500000
Events: 8357
Events per second: 51.4504
jumped back (PMT): 5875
#Frames read, frequency
# 0 frames :443926
# 1 frames :183781
# 2 frames :6269
# 3 frames :2453
# 4 frames :1483
# 5 frames :687
# 6 frames :1128
# 7 frames :2353
# 8 frames :1176
# 9 frames :747
# 10 frames :987
# 11 frames :985
# 12 frames :781
# 13 frames :495
# 14 frames :348
# 15 frames :283
# 16 frames :281
# 17 frames :221
# 18 frames :208
# 19 frames :156
# 20 frames :94
# 21 frames :69
# 22 frames :65
# 23 frames :37
# 24 frames :41
# 25 frames :29
# 26 frames :24
# 27 frames :14
# 28 frames :13
# 29 frames :20
# 30 frames :11
# 31 frames :14
# 32 frames :11
# 33 frames :6
# 34 frames :9
# 35 frames :4
# 36 frames :3
# 37 frames :2
# 38 frames :1
# 39 frames :2
# 41 frames :1
# 42 frames :1
# 44 frames :1
# 46 frames :1
# 47 frames :1
# 55 frames :1
# 59 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.5481
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0