Click on the log titles below to expand the log entries present in this DC resource.

## cfg-#1

[experiment]

date = 2022-07-13

event count = 121179

run index = 1

sample = P76_2_unstained

time = 10:40:40

[fluorescence]

baseline 1 offset = -13

baseline 2 offset = -15

baseline 3 offset = -3

bit depth = 16

channel 1 name = 525/50

channel 2 name = 593/46

channel 3 name = 700/75

channel count = 3

channels installed = 3

laser 1 lambda = 488.000000000000

laser 1 power = 2.000000000000

laser 3 lambda = 640.000000000000

laser 3 power = 50.000000000000

laser count = 2

lasers installed = 3

sample rate = 625000

samples per event = 351

signal max = 1.000000000000

signal min = -1.000000000000

trace median = 5

[imaging]

flash device = LED (ZMD L1)

flash duration = 2.000000000000

frame rate = 1600.000000000000

pixel size = 0.337000000000

roi position x = 629

roi position y = 490

roi size x = 250

roi size y = 80

[online_contour]

bg empty = True

bin area min = 10

bin kernel = 5

bin threshold = -6

image blur = 0

no absdiff = True

[online_filter]

area_ratio max = 1.050000000000

area_ratio min = 1.000000000000

area_ratio soft limit = True

area_um max = 1500.000000000000

area_um min = 10.000000000000

area_um soft limit = False

aspect max = 3.000000000000

aspect min = 1.000000000000

aspect soft limit = False

deform max = 0.240000000000

deform min = 0.000000000000

deform soft limit = True

size_x max = 80.000000000000

size_x min = 1.000000000000

size_x soft limit = False

size_y max = 80.000000000000

size_y min = 1.000000000000

size_y soft limit = False

[setup]

channel width = 20.000000000000

chip region = channel

flow rate = 0.060000000000

flow rate sample = 0.015000000000

flow rate sheath = 0.045000000000

identifier = ZMDD-AcC-04682c-208b19

medium = CellCarrierB

module composition = AcCellerator,FluorescenceModule

software version = 2.3.3.54

temperature = 0.000000000000

## cfg-#2

[experiment]

date = 2022-07-13

event count = 69453

run index = 2

sample = P76_2_unstained

time = 10:54:34

[fluorescence]

baseline 1 offset = -13

baseline 2 offset = -16

baseline 3 offset = -3

bit depth = 16

channel 1 name = 525/50

channel 2 name = 593/46

channel 3 name = 700/75

channel count = 3

channels installed = 3

laser 1 lambda = 488.000000000000

laser 1 power = 2.000000000000

laser 3 lambda = 640.000000000000

laser 3 power = 50.000000000000

laser count = 2

lasers installed = 3

sample rate = 625000

samples per event = 351

signal max = 1.000000000000

signal min = -1.000000000000

trace median = 5

[imaging]

flash device = LED (ZMD L1)

flash duration = 2.000000000000

frame rate = 1600.000000000000

pixel size = 0.337000000000

roi position x = 629

roi position y = 490

roi size x = 250

roi size y = 80

[online_contour]

bg empty = True

bin area min = 10

bin kernel = 5

bin threshold = -6

image blur = 0

no absdiff = True

[online_filter]

area_ratio max = 1.050000000000

area_ratio min = 1.000000000000

area_ratio soft limit = True

area_um max = 1500.000000000000

area_um min = 10.000000000000

area_um soft limit = False

aspect max = 3.000000000000

aspect min = 1.000000000000

aspect soft limit = False

deform max = 0.240000000000

deform min = 0.000000000000

deform soft limit = True

size_x max = 80.000000000000

size_x min = 1.000000000000

size_x soft limit = False

size_y max = 80.000000000000

size_y min = 1.000000000000

size_y soft limit = False

[setup]

channel width = 20.000000000000

chip region = channel

flow rate = 0.060000000000

flow rate sample = 0.015000000000

flow rate sheath = 0.045000000000

identifier = ZMDD-AcC-04682c-208b19

medium = CellCarrierB

module composition = AcCellerator,FluorescenceModule

software version = 2.3.3.54

temperature = 0.000000000000

## cfg-#3

[experiment]

date = 2022-07-13

event count = 114713

run index = 3

sample = P76_2_unstained

time = 11:04:35

[fluorescence]

baseline 1 offset = -13

baseline 2 offset = -16

baseline 3 offset = -3

bit depth = 16

channel 1 name = 525/50

channel 2 name = 593/46

channel 3 name = 700/75

channel count = 3

channels installed = 3

laser 1 lambda = 488.000000000000

laser 1 power = 2.000000000000

laser 3 lambda = 640.000000000000

laser 3 power = 50.000000000000

laser count = 2

lasers installed = 3

sample rate = 625000

samples per event = 351

signal max = 1.000000000000

signal min = -1.000000000000

trace median = 5

[imaging]

flash device = LED (ZMD L1)

flash duration = 2.000000000000

frame rate = 1600.000000000000

pixel size = 0.337000000000

roi position x = 629

roi position y = 490

roi size x = 250

roi size y = 80

[online_contour]

bg empty = True

bin area min = 10

bin kernel = 5

bin threshold = -6

image blur = 0

no absdiff = True

[online_filter]

area_ratio max = 1.050000000000

area_ratio min = 1.000000000000

area_ratio soft limit = True

area_um max = 1500.000000000000

area_um min = 10.000000000000

area_um soft limit = False

aspect max = 3.000000000000

aspect min = 1.000000000000

aspect soft limit = False

deform max = 0.240000000000

deform min = 0.000000000000

deform soft limit = True

size_x max = 80.000000000000

size_x min = 1.000000000000

size_x soft limit = False

size_y max = 80.000000000000

size_y min = 1.000000000000

size_y soft limit = False

[setup]

channel width = 20.000000000000

chip region = channel

flow rate = 0.060000000000

flow rate sample = 0.015000000000

flow rate sheath = 0.045000000000

identifier = ZMDD-AcC-04682c-208b19

medium = CellCarrierB

module composition = AcCellerator,FluorescenceModule

software version = 2.3.3.54

temperature = 0.000000000000

## dckit-history

[

{

"libraries": {

"dckit": "0.14.5",

"dclab": "0.47.0",

"h5py": "3.7.0",

"imageio": "2.10.3",

"nptdms": "1.6.0",

"numpy": "1.23.5"

},

"python": {

"build": "tags/v3.8.0:fa919fd, Oct 14 2019 19:37:50",

"implementation": "CPython",

"version": "3.8.0"

},

"system": {

"info": "Windows-10-10.0.18362-SP0",

"machine": "AMD64",

"name": "Windows",

"release": "10",

"version": "10.0.18362"

},

"task": {

"name": "update metadata",

"new": {

"experiment:sample": "S16_Colon blind_2"

},

"old": {

"experiment:sample": "P76_2_unstained_combined"

}

},

"utc": {

"date": "2023-01-19",

"time": "16:12:03"

}

},

{

"libraries": {

"dckit": "0.14.5",

"dclab": "0.47.0",

"h5py": "3.7.0",

"imageio": "2.10.3",

"nptdms": "1.6.0",

"numpy": "1.23.5"

},

"python": {

"build": "tags/v3.8.0:fa919fd, Oct 14 2019 19:37:50",

"implementation": "CPython",

"version": "3.8.0"

},

"system": {

"info": "Windows-10-10.0.18362-SP0",

"machine": "AMD64",

"name": "Windows",

"release": "10",

"version": "10.0.18362"

},

"task": {

"name": "update metadata",

"new": {

"experiment:sample": "S16_Colon_tumour"

},

"old": {

"experiment:sample": "S16_Colon blind_2"

}

},

"utc": {

"date": "2023-01-19",

"time": "16:26:49"

}

}

]

## dclab-compress

{

"files": [

{

"index": 1,

"md5-5M": "75059b0839d8d9af551a5e24ec435add",

"name": "S16_Colon_tumour.rtdc"

}

],

"libraries": {

"dclab": "0.47.2",

"h5py": "3.7.0",

"numpy": "1.23.5"

},

"python": {

"build": "tags/v3.9.13:6de2ca5, May 17 2022 16:36:42",

"implementation": "CPython",

"version": "3.9.13"

},

"system": {

"info": "Windows-10-10.0.18363-SP0",

"machine": "AMD64",

"name": "Windows",

"release": "10",

"version": "10.0.18363"

},

"utc": {

"date": "2023-01-19",

"time": "20:47:42"

}

}

## dclab-join

{

"files": [

{

"index": 1,

"md5-5M": "9e091306766ff32539f23e0fefd97db5",

"name": "M001_data.rtdc"

},

{

"index": 2,

"md5-5M": "88ff7756ad41c6d4143645972dc73d59",

"name": "M002_data.rtdc"

},

{

"index": 3,

"md5-5M": "cda1e19c500b55240385880bdf5e7807",

"name": "M003_data.rtdc"

}

],

"libraries": {

"dclab": "0.42.2",

"h5py": "3.7.0",

"imageio": "2.10.3",

"nptdms": "1.4.0",

"numpy": "1.22.3"

},

"python": {

"build": "tags/v3.8.0:fa919fd, Oct 14 2019 19:37:50",

"implementation": "CPython",

"version": "3.8.0"

},

"system": {

"info": "Windows-10-10.0.19041-SP0",

"machine": "AMD64",

"name": "Windows",

"release": "10",

"version": "10.0.19041"

},

"utc": {

"date": "2022-07-13",

"time": "09:30:08"

}

}

## src-#1_shapein-acquisition

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[LOG] 10:48:29.871 Stop measurement

## src-#1_shapein-warning

[WARNING] 10:48:29.872 Forced background image aggregations: 4402 times

## src-#2_shapein-acquisition

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[LOG] 11:01:35.450 Stop measurement

## src-#2_shapein-warning

[WARNING] 11:01:35.451 Forced background image aggregations: 2438 times

## src-#3_shapein-acquisition

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[LOG] 11:12:24.203 Events written: 80029

[LOG] 11:12:27.139 Events written: 81017

[LOG] 11:12:57.536 Events written: 82000

[LOG] 11:12:59.319 Events written: 83037

[LOG] 11:13:00.959 Events written: 84028

[LOG] 11:13:03.014 Events written: 85004

[LOG] 11:13:05.426 Events written: 86001

[LOG] 11:13:07.632 Events written: 87068

[LOG] 11:13:09.913 Events written: 88005

[LOG] 11:13:12.538 Events written: 89021

[LOG] 11:13:16.262 Events written: 90034

[LOG] 11:13:20.509 Events written: 91013

[LOG] 11:13:22.931 Events written: 92033

[LOG] 11:13:27.183 Events written: 93001

[LOG] 11:13:30.358 Events written: 94011

[LOG] 11:13:33.638 Events written: 95000

[LOG] 11:13:37.362 Events written: 96014

[LOG] 11:13:41.302 Events written: 97043

[LOG] 11:13:44.365 Events written: 98029

[LOG] 11:13:49.275 Events written: 99008

[LOG] 11:13:53.324 Events written: 100000

[LOG] 11:13:56.944 Events written: 101015

[LOG] 11:14:01.319 Events written: 102011

[LOG] 11:14:06.569 Events written: 103022

[LOG] 11:14:09.851 Events written: 104030

[LOG] 11:14:14.662 Events written: 105014

[LOG] 11:14:18.164 Events written: 106011

[LOG] 11:14:21.759 Events written: 107011

[LOG] 11:14:26.801 Events written: 108035

[LOG] 11:14:29.543 Events written: 109030

[LOG] 11:14:34.236 Events written: 110004

[LOG] 11:14:39.806 Events written: 111006

[LOG] 11:14:46.380 Events written: 112022

[LOG] 11:14:50.420 Events written: 113011

[LOG] 11:14:54.354 Events written: 114002

[LOG] 11:15:35.981 Stop measurement

## src-#3_shapein-warning

[WARNING] 11:15:35.982 Forced background image aggregations: 1070 times