Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.58.45
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "a43cc012b3e42654a538238c16c3b3b8",
"name": "M1_20170530_2058_c2_dsRNA_A4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:59:06"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8016 (max 8017) in '8016'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9988
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.34133e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 15 mean_circ: 0.931595
Ran for 1050 frames Cell Events: 24 mean_circ: 0.941196
Ran for 1550 frames Cell Events: 33 mean_circ: 0.929453
Ran for 2050 frames Cell Events: 44 mean_circ: 0.932169
Ran for 2550 frames Cell Events: 64 mean_circ: 0.936979
Ran for 3050 frames Cell Events: 74 mean_circ: 0.934091
Ran for 4550 frames Cell Events: 103 mean_circ: 0.938339
Ran for 5050 frames Cell Events: 121 mean_circ: 0.936112
Ran for 5550 frames Cell Events: 139 mean_circ: 0.93665
Ran for 6050 frames Cell Events: 149 mean_circ: 0.937833
Ran for 6550 frames Cell Events: 157 mean_circ: 0.938568
Ran for 7050 frames Cell Events: 184 mean_circ: 0.939921
Ran for 7550 frames Cell Events: 201 mean_circ: 0.939588
Ran for 8050 frames Cell Events: 215 mean_circ: 0.939044
Ran for 9550 frames Cell Events: 262 mean_circ: 0.938923
Ran for 10550 frames Cell Events: 300 mean_circ: 0.93783
Ran for 11050 frames Cell Events: 310 mean_circ: 0.938183
Ran for 11550 frames Cell Events: 316 mean_circ: 0.938808
Ran for 12050 frames Cell Events: 331 mean_circ: 0.938935
Ran for 12550 frames Cell Events: 338 mean_circ: 0.939076
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Ran for 14550 frames Cell Events: 385 mean_circ: 0.940177
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Ran for 34550 frames Cell Events: 896 mean_circ: 0.938148
Ran for 35050 frames Cell Events: 910 mean_circ: 0.938018
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Ran for 37050 frames Cell Events: 965 mean_circ: 0.938415
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Ran for 38550 frames Cell Events: 997 mean_circ: 0.938657
Ran for 39050 frames Cell Events: 1006 mean_circ: 0.938783
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Ran for 63550 frames Cell Events: 1618 mean_circ: 0.939247
Ran for 64050 frames Cell Events: 1625 mean_circ: 0.939305
Ran for 64550 frames Cell Events: 1637 mean_circ: 0.939418
Ran for 65050 frames Cell Events: 1651 mean_circ: 0.939539
Ran for 66550 frames Cell Events: 1675 mean_circ: 0.93946
Ran for 67050 frames Cell Events: 1684 mean_circ: 0.939579
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Ran for 70050 frames Cell Events: 1755 mean_circ: 0.939304
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Ran for 71050 frames Cell Events: 1770 mean_circ: 0.93933
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Ran for 72050 frames Cell Events: 1791 mean_circ: 0.939229
Ran for 72550 frames Cell Events: 1804 mean_circ: 0.93917
Ran for 73550 frames Cell Events: 1843 mean_circ: 0.939086
Ran for 74050 frames Cell Events: 1857 mean_circ: 0.939097
Ran for 74550 frames Cell Events: 1869 mean_circ: 0.939251
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Ran for 76050 frames Cell Events: 1910 mean_circ: 0.939124
Ran for 76550 frames Cell Events: 1918 mean_circ: 0.939041
Ran for 78550 frames Cell Events: 1971 mean_circ: 0.938825
Ran for 79050 frames Cell Events: 1984 mean_circ: 0.938859
Ran for 79550 frames Cell Events: 1998 mean_circ: 0.938853
Ran for 80050 frames Cell Events: 2005 mean_circ: 0.938837
Ran for 80550 frames Cell Events: 2017 mean_circ: 0.938892
Ran for 81050 frames Cell Events: 2033 mean_circ: 0.938967
Ran for 81550 frames Cell Events: 2044 mean_circ: 0.938849
Ran for 82050 frames Cell Events: 2057 mean_circ: 0.938778
Ran for 82550 frames Cell Events: 2073 mean_circ: 0.938984
Ran for 83550 frames Cell Events: 2108 mean_circ: 0.938966
Ran for 84050 frames Cell Events: 2128 mean_circ: 0.938911
Ran for 84550 frames Cell Events: 2139 mean_circ: 0.938988
Ran for 85050 frames Cell Events: 2159 mean_circ: 0.939058
Ran for 85550 frames Cell Events: 2164 mean_circ: 0.93904
Ran for 86050 frames Cell Events: 2178 mean_circ: 0.938999
Ran for 86550 frames Cell Events: 2192 mean_circ: 0.939098
Ran for 87050 frames Cell Events: 2203 mean_circ: 0.939197
Ran for 87550 frames Cell Events: 2214 mean_circ: 0.939175
Ran for 88050 frames Cell Events: 2223 mean_circ: 0.939283
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Ran for 90050 frames Cell Events: 2324 mean_circ: 0.939358
Ran for 90550 frames Cell Events: 2339 mean_circ: 0.939368
Ran for 91050 frames Cell Events: 2351 mean_circ: 0.939435
Ran for 91550 frames Cell Events: 2366 mean_circ: 0.939574
Ran for 92550 frames Cell Events: 2387 mean_circ: 0.939468
Ran for 93050 frames Cell Events: 2400 mean_circ: 0.939569
Ran for 93550 frames Cell Events: 2419 mean_circ: 0.939487
Ran for 95050 frames Cell Events: 2455 mean_circ: 0.93939
Ran for 95550 frames Cell Events: 2464 mean_circ: 0.939436
Ran for 96050 frames Cell Events: 2472 mean_circ: 0.939513
Ran for 97050 frames Cell Events: 2505 mean_circ: 0.939573
Ran for 97550 frames Cell Events: 2517 mean_circ: 0.939673
Ran for 98050 frames Cell Events: 2534 mean_circ: 0.939739
Ran for 99050 frames Cell Events: 2566 mean_circ: 0.939771
Ran for 100050 frames Cell Events: 2592 mean_circ: 0.939903
Ran for 100550 frames Cell Events: 2611 mean_circ: 0.940019
Ran for 101050 frames Cell Events: 2629 mean_circ: 0.940032
Ran for 101550 frames Cell Events: 2643 mean_circ: 0.940034
Ran for 102550 frames Cell Events: 2671 mean_circ: 0.939947
Ran for 103050 frames Cell Events: 2686 mean_circ: 0.939805
Ran for 104050 frames Cell Events: 2724 mean_circ: 0.939852
Ran for 104550 frames Cell Events: 2731 mean_circ: 0.939869
Ran for 106050 frames Cell Events: 2788 mean_circ: 0.939929
Ran for 106550 frames Cell Events: 2797 mean_circ: 0.939965
Ran for 107050 frames Cell Events: 2814 mean_circ: 0.939778
Ran for 107550 frames Cell Events: 2825 mean_circ: 0.939779
Ran for 108550 frames Cell Events: 2859 mean_circ: 0.939731
Ran for 109050 frames Cell Events: 2875 mean_circ: 0.939688
Ran for 109550 frames Cell Events: 2884 mean_circ: 0.9397
Ran for 111050 frames Cell Events: 2927 mean_circ: 0.939554
Ran for 112050 frames Cell Events: 2958 mean_circ: 0.939481
Ran for 113550 frames Cell Events: 3006 mean_circ: 0.9393
Ran for 114550 frames Cell Events: 3030 mean_circ: 0.939191
Ran for 115050 frames Cell Events: 3041 mean_circ: 0.939211
Ran for 115550 frames Cell Events: 3054 mean_circ: 0.939182
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Ran for 120050 frames Cell Events: 3160 mean_circ: 0.939351
Ran for 121050 frames Cell Events: 3184 mean_circ: 0.939343
Ran for 121550 frames Cell Events: 3198 mean_circ: 0.939299
Ran for 122050 frames Cell Events: 3210 mean_circ: 0.939316
Ran for 122550 frames Cell Events: 3221 mean_circ: 0.939268
Ran for 123050 frames Cell Events: 3236 mean_circ: 0.939309
Ran for 123550 frames Cell Events: 3245 mean_circ: 0.939222
Ran for 124050 frames Cell Events: 3253 mean_circ: 0.939214
Ran for 124550 frames Cell Events: 3261 mean_circ: 0.939282
Ran for 126050 frames Cell Events: 3300 mean_circ: 0.939215
Ran for 127050 frames Cell Events: 3318 mean_circ: 0.939152
Ran for 129050 frames Cell Events: 3369 mean_circ: 0.939213
Ran for 129550 frames Cell Events: 3385 mean_circ: 0.939189
Ran for 131050 frames Cell Events: 3429 mean_circ: 0.939374
Ran for 132550 frames Cell Events: 3472 mean_circ: 0.939448
Ran for 133050 frames Cell Events: 3484 mean_circ: 0.939468
Ran for 134050 frames Cell Events: 3509 mean_circ: 0.939387
Ran for 135050 frames Cell Events: 3534 mean_circ: 0.939395
Ran for 135550 frames Cell Events: 3545 mean_circ: 0.939328
Ran for 136050 frames Cell Events: 3561 mean_circ: 0.939349
Ran for 136550 frames Cell Events: 3572 mean_circ: 0.939367
Ran for 137550 frames Cell Events: 3599 mean_circ: 0.939345
Ran for 138050 frames Cell Events: 3617 mean_circ: 0.939256
Ran for 139050 frames Cell Events: 3638 mean_circ: 0.939311
Ran for 139550 frames Cell Events: 3646 mean_circ: 0.939317
Ran for 140550 frames Cell Events: 3664 mean_circ: 0.939263
Ran for 141050 frames Cell Events: 3681 mean_circ: 0.939234
Ran for 141550 frames Cell Events: 3689 mean_circ: 0.939198
Ran for 142050 frames Cell Events: 3708 mean_circ: 0.939166
Ran for 142550 frames Cell Events: 3729 mean_circ: 0.939165
Ran for 143050 frames Cell Events: 3749 mean_circ: 0.939195
Ran for 144050 frames Cell Events: 3779 mean_circ: 0.939306
Ran for 144550 frames Cell Events: 3787 mean_circ: 0.939278
Ran for 146550 frames Cell Events: 3847 mean_circ: 0.939332
Ran for 147550 frames Cell Events: 3873 mean_circ: 0.939372
Ran for 148050 frames Cell Events: 3884 mean_circ: 0.939417
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Ran for 152550 frames Cell Events: 4016 mean_circ: 0.939441
Ran for 153550 frames Cell Events: 4062 mean_circ: 0.939406
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Ran for 171550 frames Cell Events: 4600 mean_circ: 0.9394
Ran for 172550 frames Cell Events: 4631 mean_circ: 0.939378
Ran for 173050 frames Cell Events: 4646 mean_circ: 0.939376
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Ran for 175550 frames Cell Events: 4719 mean_circ: 0.939264
Ran for 176050 frames Cell Events: 4736 mean_circ: 0.939248
Ran for 176550 frames Cell Events: 4756 mean_circ: 0.939285
Ran for 177550 frames Cell Events: 4787 mean_circ: 0.939349
Ran for 178050 frames Cell Events: 4797 mean_circ: 0.939361
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Ran for 181050 frames Cell Events: 4890 mean_circ: 0.939428
Ran for 182550 frames Cell Events: 4958 mean_circ: 0.939393
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Ran for 183550 frames Cell Events: 4979 mean_circ: 0.939331
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Ran for 190550 frames Cell Events: 5222 mean_circ: 0.939316
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Ran for 192550 frames Cell Events: 5279 mean_circ: 0.939354
Ran for 193050 frames Cell Events: 5299 mean_circ: 0.939348
Ran for 193550 frames Cell Events: 5310 mean_circ: 0.939346
Ran for 194050 frames Cell Events: 5320 mean_circ: 0.939353
Ran for 195550 frames Cell Events: 5355 mean_circ: 0.939242
Ran for 196050 frames Cell Events: 5369 mean_circ: 0.939285
Ran for 196550 frames Cell Events: 5377 mean_circ: 0.939288
Ran for 198050 frames Cell Events: 5421 mean_circ: 0.939263
Ran for 198550 frames Cell Events: 5437 mean_circ: 0.939256
Ran for 199550 frames Cell Events: 5486 mean_circ: 0.939228
Ran for 200050 frames Cell Events: 5506 mean_circ: 0.939196
Ran for 200550 frames Cell Events: 5528 mean_circ: 0.939137
Ran for 201550 frames Cell Events: 5555 mean_circ: 0.939119
Ran for 202050 frames Cell Events: 5569 mean_circ: 0.939064
Ran for 202550 frames Cell Events: 5586 mean_circ: 0.939023
Ran for 203050 frames Cell Events: 5609 mean_circ: 0.93903
Ran for 203550 frames Cell Events: 5629 mean_circ: 0.938977
Ran for 204550 frames Cell Events: 5659 mean_circ: 0.939026
Ran for 205050 frames Cell Events: 5667 mean_circ: 0.938994
Ran for 205550 frames Cell Events: 5679 mean_circ: 0.938997
Ran for 206550 frames Cell Events: 5705 mean_circ: 0.938929
Ran for 207050 frames Cell Events: 5712 mean_circ: 0.938896
Ran for 208550 frames Cell Events: 5752 mean_circ: 0.938781
Ran for 209050 frames Cell Events: 5772 mean_circ: 0.938796
Ran for 210050 frames Cell Events: 5796 mean_circ: 0.938782
Ran for 210550 frames Cell Events: 5807 mean_circ: 0.938822
Ran for 211050 frames Cell Events: 5816 mean_circ: 0.938817
Ran for 211550 frames Cell Events: 5828 mean_circ: 0.938815
Ran for 212050 frames Cell Events: 5841 mean_circ: 0.938828
Ran for 212550 frames Cell Events: 5851 mean_circ: 0.938771
Ran for 213050 frames Cell Events: 5863 mean_circ: 0.938773
Ran for 214050 frames Cell Events: 5898 mean_circ: 0.938776
Ran for 214550 frames Cell Events: 5925 mean_circ: 0.938765
Ran for 215050 frames Cell Events: 5938 mean_circ: 0.938802
Ran for 216550 frames Cell Events: 6004 mean_circ: 0.938706
Ran for 217050 frames Cell Events: 6016 mean_circ: 0.938701
Ran for 217550 frames Cell Events: 6035 mean_circ: 0.938721
Ran for 218050 frames Cell Events: 6051 mean_circ: 0.93868
Ran for 218550 frames Cell Events: 6064 mean_circ: 0.93868
Ran for 219550 frames Cell Events: 6089 mean_circ: 0.93866
Ran for 220050 frames Cell Events: 6104 mean_circ: 0.938637
Ran for 221050 frames Cell Events: 6134 mean_circ: 0.93861
Ran for 221550 frames Cell Events: 6147 mean_circ: 0.938568
Ran for 222550 frames Cell Events: 6173 mean_circ: 0.938571
Ran for 223050 frames Cell Events: 6188 mean_circ: 0.93857
Ran for 223550 frames Cell Events: 6203 mean_circ: 0.938599
Ran for 224550 frames Cell Events: 6249 mean_circ: 0.938684
Ran for 225050 frames Cell Events: 6265 mean_circ: 0.938619
Ran for 225550 frames Cell Events: 6284 mean_circ: 0.938652
Ran for 226050 frames Cell Events: 6304 mean_circ: 0.938643
Ran for 226550 frames Cell Events: 6320 mean_circ: 0.938648
Ran for 227050 frames Cell Events: 6332 mean_circ: 0.938654
Ran for 227550 frames Cell Events: 6352 mean_circ: 0.938573
Ran for 228550 frames Cell Events: 6384 mean_circ: 0.9386
Ran for 229550 frames Cell Events: 6414 mean_circ: 0.938583
Ran for 230550 frames Cell Events: 6443 mean_circ: 0.938617
Ran for 231050 frames Cell Events: 6456 mean_circ: 0.938568
Ran for 231550 frames Cell Events: 6470 mean_circ: 0.938623
Ran for 232050 frames Cell Events: 6493 mean_circ: 0.938643
Ran for 232550 frames Cell Events: 6500 mean_circ: 0.938676
Ran for 233050 frames Cell Events: 6516 mean_circ: 0.93868
Ran for 233550 frames Cell Events: 6541 mean_circ: 0.938708
Ran for 234050 frames Cell Events: 6553 mean_circ: 0.938729
Ran for 234550 frames Cell Events: 6567 mean_circ: 0.938759
Ran for 235050 frames Cell Events: 6577 mean_circ: 0.938796
Ran for 236050 frames Cell Events: 6615 mean_circ: 0.938855
Ran for 236550 frames Cell Events: 6628 mean_circ: 0.938835
Ran for 237050 frames Cell Events: 6638 mean_circ: 0.938837
Ran for 237550 frames Cell Events: 6649 mean_circ: 0.938856
Ran for 238050 frames Cell Events: 6669 mean_circ: 0.938847
Ran for 239050 frames Cell Events: 6695 mean_circ: 0.938909
Ran for 240050 frames Cell Events: 6726 mean_circ: 0.938925
Ran for 240550 frames Cell Events: 6741 mean_circ: 0.938915
Ran for 241550 frames Cell Events: 6779 mean_circ: 0.938892
Ran for 242050 frames Cell Events: 6794 mean_circ: 0.938888
Ran for 242550 frames Cell Events: 6806 mean_circ: 0.938874
Ran for 243050 frames Cell Events: 6821 mean_circ: 0.938898
Ran for 244050 frames Cell Events: 6849 mean_circ: 0.938907
Ran for 244550 frames Cell Events: 6865 mean_circ: 0.938887
Ran for 245050 frames Cell Events: 6871 mean_circ: 0.938891
Ran for 245550 frames Cell Events: 6883 mean_circ: 0.938905
Ran for 248050 frames Cell Events: 6960 mean_circ: 0.938927
Ran for 248550 frames Cell Events: 6973 mean_circ: 0.938938
Ran for 249550 frames Cell Events: 7003 mean_circ: 0.938994
Ran for 250050 frames Cell Events: 7021 mean_circ: 0.939017
Ran for 250550 frames Cell Events: 7034 mean_circ: 0.938984
Ran for 251050 frames Cell Events: 7052 mean_circ: 0.938994
Ran for 251550 frames Cell Events: 7064 mean_circ: 0.938993
Ran for 252550 frames Cell Events: 7093 mean_circ: 0.938989
Ran for 253050 frames Cell Events: 7105 mean_circ: 0.938999
Ran for 253550 frames Cell Events: 7116 mean_circ: 0.938967
Ran for 254550 frames Cell Events: 7148 mean_circ: 0.938875
Ran for 255050 frames Cell Events: 7156 mean_circ: 0.938898
Ran for 255550 frames Cell Events: 7184 mean_circ: 0.93889
Ran for 256050 frames Cell Events: 7199 mean_circ: 0.93886
Ran for 256550 frames Cell Events: 7210 mean_circ: 0.938857
Ran for 257050 frames Cell Events: 7219 mean_circ: 0.93884
Ran for 258050 frames Cell Events: 7248 mean_circ: 0.938846
Ran for 258550 frames Cell Events: 7269 mean_circ: 0.938781
Ran for 260050 frames Cell Events: 7317 mean_circ: 0.93874
Ran for 260550 frames Cell Events: 7332 mean_circ: 0.938725
Ran for 261550 frames Cell Events: 7372 mean_circ: 0.93863
Ran for 263550 frames Cell Events: 7432 mean_circ: 0.938541
Ran for 264550 frames Cell Events: 7468 mean_circ: 0.938566
Ran for 265050 frames Cell Events: 7479 mean_circ: 0.938564
Ran for 265550 frames Cell Events: 7497 mean_circ: 0.938549
Ran for 266050 frames Cell Events: 7510 mean_circ: 0.938543
Ran for 266550 frames Cell Events: 7530 mean_circ: 0.938569
Ran for 267050 frames Cell Events: 7544 mean_circ: 0.938563
Ran for 267550 frames Cell Events: 7565 mean_circ: 0.938561
Ran for 268050 frames Cell Events: 7578 mean_circ: 0.93851
Ran for 268550 frames Cell Events: 7602 mean_circ: 0.938519
Ran for 269550 frames Cell Events: 7639 mean_circ: 0.93858
Ran for 270050 frames Cell Events: 7653 mean_circ: 0.93857
Ran for 270550 frames Cell Events: 7663 mean_circ: 0.938512
Ran for 271050 frames Cell Events: 7677 mean_circ: 0.938494
Ran for 271550 frames Cell Events: 7694 mean_circ: 0.938482
Ran for 272050 frames Cell Events: 7714 mean_circ: 0.938453
Ran for 272550 frames Cell Events: 7729 mean_circ: 0.938485
Ran for 273550 frames Cell Events: 7753 mean_circ: 0.938498
Ran for 274550 frames Cell Events: 7789 mean_circ: 0.938517
Ran for 275550 frames Cell Events: 7815 mean_circ: 0.938469
Ran for 276050 frames Cell Events: 7835 mean_circ: 0.938488
Ran for 277050 frames Cell Events: 7867 mean_circ: 0.93845
Ran for 277550 frames Cell Events: 7881 mean_circ: 0.938442
Ran for 278050 frames Cell Events: 7890 mean_circ: 0.938455
Ran for 278550 frames Cell Events: 7904 mean_circ: 0.938472
Ran for 279050 frames Cell Events: 7906 mean_circ: 0.938485
Ran for 279550 frames Cell Events: 7916 mean_circ: 0.938509
Ran for 280050 frames Cell Events: 7931 mean_circ: 0.938518
Ran for 280550 frames Cell Events: 7939 mean_circ: 0.938526
Ran for 281050 frames Cell Events: 7960 mean_circ: 0.938511
Ran for 281550 frames Cell Events: 7967 mean_circ: 0.938503
Ran for 282050 frames Cell Events: 7978 mean_circ: 0.938499
Ran for 282550 frames Cell Events: 7994 mean_circ: 0.938499
Ran for 283050 frames Cell Events: 8011 mean_circ: 0.938498
End this measurment..
Stopping time: 1.34147e+009
****************************************
Measurement finished
Mean Circularitiy: 0.938483
Mean Area: 578.741
Mean FL-1 intensity: 2378.3
Mean FL-2 intensity: 3328.56
Mean FL-3 intensity: 0
frames processed: 280825
Total Time: 141834ms
Number of Runs (new bg img) 0
Frames collected: 283494
Skipped frames: 107783
Rescued Frames: 5012389
Samples DAQ: 70873607
Samples written: 141746836
Samples per Channel: 70873418
FPS: 1998.78
Samples per second: 499694
Expected samples/s: 500000
Events: 8017
Events per second: 56.5239
jumped back (PMT): 4558
#Frames read, frequency
# 0 frames :403638
# 1 frames :144248
# 2 frames :4933
# 3 frames :2125
# 4 frames :1328
# 5 frames :753
# 6 frames :1003
# 7 frames :1704
# 8 frames :1352
# 9 frames :858
# 10 frames :743
# 11 frames :715
# 12 frames :692
# 13 frames :471
# 14 frames :417
# 15 frames :329
# 16 frames :261
# 17 frames :250
# 18 frames :222
# 19 frames :165
# 20 frames :135
# 21 frames :101
# 22 frames :66
# 23 frames :75
# 24 frames :50
# 25 frames :47
# 26 frames :40
# 27 frames :30
# 28 frames :21
# 29 frames :20
# 30 frames :27
# 31 frames :24
# 32 frames :16
# 33 frames :13
# 34 frames :5
# 35 frames :9
# 36 frames :9
# 37 frames :6
# 38 frames :6
# 39 frames :5
# 40 frames :9
# 41 frames :3
# 42 frames :4
# 43 frames :4
# 44 frames :2
# 45 frames :3
# 47 frames :2
# 48 frames :2
# 49 frames :3
# 51 frames :1
# 52 frames :3
# 56 frames :2
# 60 frames :1
# 65 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9988
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0