Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.57.43
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "b02c5fb6db0d5aa43a2336736a6d3359",
"name": "M1_20170530_2046_c2_dsRNA_A8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:58:04"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8935
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.3406e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.922001
Ran for 550 frames Cell Events: 12 mean_circ: 0.930519
Ran for 1550 frames Cell Events: 27 mean_circ: 0.939293
Ran for 2050 frames Cell Events: 37 mean_circ: 0.935404
Ran for 3050 frames Cell Events: 62 mean_circ: 0.937457
Ran for 4050 frames Cell Events: 86 mean_circ: 0.939944
Ran for 4550 frames Cell Events: 92 mean_circ: 0.939956
Ran for 5050 frames Cell Events: 104 mean_circ: 0.940313
Ran for 5550 frames Cell Events: 121 mean_circ: 0.941061
Ran for 6050 frames Cell Events: 135 mean_circ: 0.942077
Ran for 7050 frames Cell Events: 172 mean_circ: 0.940993
Ran for 8050 frames Cell Events: 197 mean_circ: 0.941176
Ran for 9050 frames Cell Events: 221 mean_circ: 0.940854
Ran for 9550 frames Cell Events: 235 mean_circ: 0.940555
Ran for 10050 frames Cell Events: 244 mean_circ: 0.940089
Ran for 10550 frames Cell Events: 269 mean_circ: 0.939428
Ran for 11050 frames Cell Events: 279 mean_circ: 0.939346
Ran for 11550 frames Cell Events: 288 mean_circ: 0.939438
Ran for 12050 frames Cell Events: 303 mean_circ: 0.939506
Ran for 13050 frames Cell Events: 341 mean_circ: 0.93912
Ran for 13550 frames Cell Events: 352 mean_circ: 0.939307
Ran for 14050 frames Cell Events: 363 mean_circ: 0.939735
Ran for 15050 frames Cell Events: 399 mean_circ: 0.938947
Ran for 15550 frames Cell Events: 411 mean_circ: 0.938201
Ran for 16050 frames Cell Events: 418 mean_circ: 0.938065
Ran for 16550 frames Cell Events: 431 mean_circ: 0.938451
Ran for 17050 frames Cell Events: 439 mean_circ: 0.938759
Ran for 17550 frames Cell Events: 451 mean_circ: 0.93895
Ran for 18050 frames Cell Events: 464 mean_circ: 0.938784
Ran for 18550 frames Cell Events: 470 mean_circ: 0.938175
Ran for 20050 frames Cell Events: 518 mean_circ: 0.939024
Ran for 21050 frames Cell Events: 527 mean_circ: 0.93923
Ran for 21550 frames Cell Events: 547 mean_circ: 0.939374
Ran for 22050 frames Cell Events: 561 mean_circ: 0.939219
Ran for 22550 frames Cell Events: 576 mean_circ: 0.939922
Ran for 23050 frames Cell Events: 584 mean_circ: 0.939878
Ran for 23550 frames Cell Events: 594 mean_circ: 0.939456
Ran for 24050 frames Cell Events: 606 mean_circ: 0.939401
Ran for 24550 frames Cell Events: 615 mean_circ: 0.939696
Ran for 25050 frames Cell Events: 622 mean_circ: 0.939602
Ran for 25550 frames Cell Events: 638 mean_circ: 0.939585
Ran for 26050 frames Cell Events: 646 mean_circ: 0.93974
Ran for 27050 frames Cell Events: 675 mean_circ: 0.940047
Ran for 27550 frames Cell Events: 688 mean_circ: 0.940263
Ran for 29050 frames Cell Events: 720 mean_circ: 0.940511
Ran for 30050 frames Cell Events: 745 mean_circ: 0.940323
Ran for 30550 frames Cell Events: 757 mean_circ: 0.940345
Ran for 31050 frames Cell Events: 772 mean_circ: 0.94063
Ran for 31550 frames Cell Events: 784 mean_circ: 0.940647
Ran for 32050 frames Cell Events: 797 mean_circ: 0.940172
Ran for 32550 frames Cell Events: 809 mean_circ: 0.940337
Ran for 33050 frames Cell Events: 816 mean_circ: 0.940123
Ran for 33550 frames Cell Events: 830 mean_circ: 0.939958
Ran for 34050 frames Cell Events: 851 mean_circ: 0.939457
Ran for 34550 frames Cell Events: 861 mean_circ: 0.9396
Ran for 35050 frames Cell Events: 873 mean_circ: 0.939317
Ran for 35550 frames Cell Events: 886 mean_circ: 0.939258
Ran for 36050 frames Cell Events: 896 mean_circ: 0.93898
Ran for 36550 frames Cell Events: 902 mean_circ: 0.939174
Ran for 37050 frames Cell Events: 912 mean_circ: 0.938865
Ran for 37550 frames Cell Events: 930 mean_circ: 0.938769
Ran for 38050 frames Cell Events: 945 mean_circ: 0.938929
Ran for 39550 frames Cell Events: 988 mean_circ: 0.938747
Ran for 40050 frames Cell Events: 998 mean_circ: 0.938824
Ran for 40550 frames Cell Events: 1008 mean_circ: 0.938718
Ran for 41050 frames Cell Events: 1016 mean_circ: 0.938595
Ran for 42050 frames Cell Events: 1050 mean_circ: 0.938687
Ran for 42550 frames Cell Events: 1061 mean_circ: 0.938684
Ran for 43050 frames Cell Events: 1068 mean_circ: 0.938785
Ran for 43550 frames Cell Events: 1077 mean_circ: 0.938995
Ran for 44050 frames Cell Events: 1093 mean_circ: 0.939065
Ran for 44550 frames Cell Events: 1102 mean_circ: 0.939009
Ran for 45050 frames Cell Events: 1118 mean_circ: 0.93914
Ran for 45550 frames Cell Events: 1129 mean_circ: 0.939141
Ran for 47050 frames Cell Events: 1167 mean_circ: 0.939454
Ran for 47550 frames Cell Events: 1180 mean_circ: 0.939601
Ran for 48050 frames Cell Events: 1189 mean_circ: 0.939553
Ran for 48550 frames Cell Events: 1198 mean_circ: 0.939607
Ran for 49550 frames Cell Events: 1223 mean_circ: 0.939644
Ran for 50050 frames Cell Events: 1233 mean_circ: 0.939597
Ran for 50550 frames Cell Events: 1245 mean_circ: 0.939645
Ran for 51050 frames Cell Events: 1260 mean_circ: 0.939354
Ran for 52050 frames Cell Events: 1292 mean_circ: 0.939329
Ran for 53050 frames Cell Events: 1332 mean_circ: 0.939503
Ran for 53550 frames Cell Events: 1344 mean_circ: 0.939675
Ran for 54550 frames Cell Events: 1373 mean_circ: 0.939644
Ran for 55050 frames Cell Events: 1380 mean_circ: 0.939649
Ran for 56050 frames Cell Events: 1403 mean_circ: 0.939566
Ran for 57050 frames Cell Events: 1431 mean_circ: 0.939484
Ran for 57550 frames Cell Events: 1438 mean_circ: 0.939526
Ran for 58050 frames Cell Events: 1447 mean_circ: 0.939501
Ran for 58550 frames Cell Events: 1461 mean_circ: 0.939573
Ran for 59550 frames Cell Events: 1489 mean_circ: 0.939404
Ran for 60050 frames Cell Events: 1499 mean_circ: 0.939386
Ran for 60550 frames Cell Events: 1516 mean_circ: 0.939467
Ran for 63050 frames Cell Events: 1581 mean_circ: 0.939358
Ran for 63550 frames Cell Events: 1604 mean_circ: 0.939347
Ran for 64050 frames Cell Events: 1628 mean_circ: 0.938907
Ran for 64550 frames Cell Events: 1634 mean_circ: 0.938916
Ran for 65050 frames Cell Events: 1651 mean_circ: 0.938744
Ran for 65550 frames Cell Events: 1661 mean_circ: 0.938646
Ran for 66050 frames Cell Events: 1677 mean_circ: 0.938605
Ran for 67050 frames Cell Events: 1714 mean_circ: 0.938349
Ran for 67550 frames Cell Events: 1728 mean_circ: 0.938325
Ran for 68050 frames Cell Events: 1740 mean_circ: 0.938289
Ran for 68550 frames Cell Events: 1748 mean_circ: 0.93834
Ran for 69050 frames Cell Events: 1761 mean_circ: 0.938313
Ran for 69550 frames Cell Events: 1773 mean_circ: 0.938335
Ran for 70550 frames Cell Events: 1806 mean_circ: 0.938191
Ran for 71050 frames Cell Events: 1822 mean_circ: 0.938232
Ran for 71550 frames Cell Events: 1836 mean_circ: 0.93826
Ran for 72050 frames Cell Events: 1848 mean_circ: 0.938347
Ran for 73550 frames Cell Events: 1887 mean_circ: 0.938367
Ran for 74050 frames Cell Events: 1899 mean_circ: 0.938409
Ran for 74550 frames Cell Events: 1909 mean_circ: 0.938308
Ran for 75050 frames Cell Events: 1927 mean_circ: 0.938164
Ran for 75550 frames Cell Events: 1954 mean_circ: 0.93798
Ran for 76050 frames Cell Events: 1968 mean_circ: 0.937909
Ran for 76550 frames Cell Events: 1979 mean_circ: 0.937897
Ran for 77050 frames Cell Events: 1989 mean_circ: 0.937872
Ran for 78050 frames Cell Events: 2005 mean_circ: 0.93793
Ran for 78550 frames Cell Events: 2018 mean_circ: 0.937933
Ran for 79550 frames Cell Events: 2041 mean_circ: 0.938106
Ran for 80050 frames Cell Events: 2053 mean_circ: 0.938053
Ran for 80550 frames Cell Events: 2061 mean_circ: 0.938079
Ran for 81050 frames Cell Events: 2078 mean_circ: 0.937857
Ran for 81550 frames Cell Events: 2089 mean_circ: 0.937837
Ran for 82050 frames Cell Events: 2101 mean_circ: 0.9379
Ran for 82550 frames Cell Events: 2115 mean_circ: 0.937832
Ran for 83050 frames Cell Events: 2130 mean_circ: 0.937884
Ran for 85050 frames Cell Events: 2202 mean_circ: 0.937884
Ran for 85550 frames Cell Events: 2221 mean_circ: 0.937833
Ran for 86550 frames Cell Events: 2245 mean_circ: 0.937544
Ran for 87050 frames Cell Events: 2256 mean_circ: 0.937609
Ran for 88050 frames Cell Events: 2281 mean_circ: 0.937721
Ran for 88550 frames Cell Events: 2294 mean_circ: 0.937749
Ran for 89050 frames Cell Events: 2299 mean_circ: 0.937747
Ran for 89550 frames Cell Events: 2315 mean_circ: 0.937807
Ran for 90050 frames Cell Events: 2329 mean_circ: 0.937931
Ran for 90550 frames Cell Events: 2347 mean_circ: 0.937725
Ran for 91050 frames Cell Events: 2362 mean_circ: 0.937893
Ran for 92050 frames Cell Events: 2398 mean_circ: 0.937626
Ran for 92550 frames Cell Events: 2407 mean_circ: 0.937716
Ran for 94050 frames Cell Events: 2453 mean_circ: 0.937856
Ran for 94550 frames Cell Events: 2470 mean_circ: 0.93789
Ran for 95550 frames Cell Events: 2496 mean_circ: 0.937877
Ran for 96050 frames Cell Events: 2505 mean_circ: 0.937785
Ran for 96550 frames Cell Events: 2512 mean_circ: 0.937761
Ran for 97050 frames Cell Events: 2523 mean_circ: 0.93777
Ran for 97550 frames Cell Events: 2536 mean_circ: 0.937812
Ran for 98050 frames Cell Events: 2551 mean_circ: 0.937877
Ran for 98550 frames Cell Events: 2567 mean_circ: 0.937986
Ran for 99550 frames Cell Events: 2590 mean_circ: 0.938126
Ran for 100050 frames Cell Events: 2596 mean_circ: 0.938096
Ran for 100550 frames Cell Events: 2612 mean_circ: 0.938207
Ran for 101050 frames Cell Events: 2627 mean_circ: 0.938167
Ran for 102550 frames Cell Events: 2677 mean_circ: 0.938333
Ran for 103550 frames Cell Events: 2711 mean_circ: 0.938395
Ran for 104050 frames Cell Events: 2727 mean_circ: 0.938333
Ran for 105050 frames Cell Events: 2755 mean_circ: 0.938291
Ran for 105550 frames Cell Events: 2762 mean_circ: 0.93831
Ran for 106050 frames Cell Events: 2778 mean_circ: 0.938325
Ran for 106550 frames Cell Events: 2797 mean_circ: 0.93833
Ran for 107050 frames Cell Events: 2807 mean_circ: 0.938302
Ran for 107550 frames Cell Events: 2828 mean_circ: 0.938388
Ran for 108050 frames Cell Events: 2842 mean_circ: 0.938377
Ran for 108550 frames Cell Events: 2860 mean_circ: 0.938329
Ran for 109550 frames Cell Events: 2881 mean_circ: 0.938325
Ran for 110050 frames Cell Events: 2884 mean_circ: 0.938327
Ran for 110550 frames Cell Events: 2890 mean_circ: 0.938362
Ran for 111050 frames Cell Events: 2899 mean_circ: 0.938376
Ran for 111550 frames Cell Events: 2907 mean_circ: 0.938394
Ran for 112050 frames Cell Events: 2916 mean_circ: 0.938358
Ran for 112550 frames Cell Events: 2931 mean_circ: 0.93839
Ran for 113050 frames Cell Events: 2944 mean_circ: 0.93831
Ran for 113550 frames Cell Events: 2955 mean_circ: 0.938329
Ran for 114550 frames Cell Events: 2971 mean_circ: 0.938291
Ran for 116050 frames Cell Events: 3032 mean_circ: 0.938139
Ran for 117050 frames Cell Events: 3059 mean_circ: 0.938233
Ran for 117550 frames Cell Events: 3075 mean_circ: 0.938293
Ran for 118050 frames Cell Events: 3087 mean_circ: 0.938312
Ran for 118550 frames Cell Events: 3101 mean_circ: 0.938344
Ran for 119050 frames Cell Events: 3112 mean_circ: 0.938376
Ran for 119550 frames Cell Events: 3130 mean_circ: 0.938375
Ran for 120050 frames Cell Events: 3143 mean_circ: 0.938346
Ran for 120550 frames Cell Events: 3157 mean_circ: 0.93836
Ran for 121050 frames Cell Events: 3170 mean_circ: 0.93836
Ran for 121550 frames Cell Events: 3190 mean_circ: 0.938427
Ran for 122550 frames Cell Events: 3217 mean_circ: 0.938391
Ran for 123050 frames Cell Events: 3229 mean_circ: 0.938384
Ran for 123550 frames Cell Events: 3237 mean_circ: 0.938402
Ran for 124050 frames Cell Events: 3249 mean_circ: 0.938368
Ran for 124550 frames Cell Events: 3262 mean_circ: 0.938384
Ran for 125550 frames Cell Events: 3275 mean_circ: 0.938389
Ran for 126550 frames Cell Events: 3297 mean_circ: 0.938481
Ran for 127050 frames Cell Events: 3313 mean_circ: 0.938455
Ran for 127550 frames Cell Events: 3327 mean_circ: 0.938488
Ran for 128550 frames Cell Events: 3346 mean_circ: 0.938496
Ran for 129050 frames Cell Events: 3354 mean_circ: 0.9385
Ran for 131050 frames Cell Events: 3393 mean_circ: 0.938449
Ran for 131550 frames Cell Events: 3409 mean_circ: 0.938316
Ran for 132050 frames Cell Events: 3425 mean_circ: 0.938343
Ran for 133050 frames Cell Events: 3444 mean_circ: 0.938323
Ran for 133550 frames Cell Events: 3465 mean_circ: 0.938312
Ran for 134050 frames Cell Events: 3480 mean_circ: 0.938283
Ran for 134550 frames Cell Events: 3491 mean_circ: 0.938352
Ran for 135050 frames Cell Events: 3509 mean_circ: 0.9384
Ran for 135550 frames Cell Events: 3516 mean_circ: 0.938409
Ran for 136050 frames Cell Events: 3528 mean_circ: 0.938485
Ran for 136550 frames Cell Events: 3542 mean_circ: 0.938391
Ran for 137050 frames Cell Events: 3557 mean_circ: 0.938369
Ran for 137550 frames Cell Events: 3567 mean_circ: 0.938319
Ran for 138050 frames Cell Events: 3578 mean_circ: 0.938243
Ran for 139050 frames Cell Events: 3617 mean_circ: 0.938166
Ran for 139550 frames Cell Events: 3637 mean_circ: 0.938229
Ran for 140050 frames Cell Events: 3649 mean_circ: 0.938245
Ran for 140550 frames Cell Events: 3670 mean_circ: 0.938271
Ran for 141050 frames Cell Events: 3679 mean_circ: 0.938253
Ran for 142050 frames Cell Events: 3701 mean_circ: 0.938133
Ran for 142550 frames Cell Events: 3717 mean_circ: 0.938163
Ran for 144050 frames Cell Events: 3760 mean_circ: 0.938223
Ran for 145050 frames Cell Events: 3795 mean_circ: 0.938298
Ran for 145550 frames Cell Events: 3804 mean_circ: 0.938343
Ran for 146050 frames Cell Events: 3813 mean_circ: 0.938385
Ran for 146550 frames Cell Events: 3825 mean_circ: 0.938381
Ran for 147050 frames Cell Events: 3842 mean_circ: 0.938386
Ran for 147550 frames Cell Events: 3859 mean_circ: 0.938472
Ran for 148050 frames Cell Events: 3865 mean_circ: 0.938464
Ran for 149050 frames Cell Events: 3893 mean_circ: 0.938506
Ran for 149550 frames Cell Events: 3908 mean_circ: 0.938557
Ran for 150050 frames Cell Events: 3931 mean_circ: 0.938539
Ran for 150550 frames Cell Events: 3942 mean_circ: 0.938538
Ran for 151050 frames Cell Events: 3962 mean_circ: 0.938507
Ran for 152550 frames Cell Events: 4002 mean_circ: 0.938564
Ran for 153050 frames Cell Events: 4015 mean_circ: 0.938585
Ran for 154050 frames Cell Events: 4040 mean_circ: 0.93851
Ran for 154550 frames Cell Events: 4056 mean_circ: 0.93852
Ran for 155050 frames Cell Events: 4070 mean_circ: 0.938559
Ran for 156050 frames Cell Events: 4098 mean_circ: 0.938587
Ran for 156550 frames Cell Events: 4109 mean_circ: 0.938596
Ran for 157050 frames Cell Events: 4126 mean_circ: 0.938586
Ran for 157550 frames Cell Events: 4144 mean_circ: 0.938519
Ran for 158050 frames Cell Events: 4162 mean_circ: 0.938534
Ran for 158550 frames Cell Events: 4177 mean_circ: 0.938561
Ran for 159050 frames Cell Events: 4190 mean_circ: 0.938558
Ran for 159550 frames Cell Events: 4200 mean_circ: 0.938559
Ran for 160550 frames Cell Events: 4212 mean_circ: 0.938499
Ran for 161050 frames Cell Events: 4220 mean_circ: 0.938459
Ran for 161550 frames Cell Events: 4234 mean_circ: 0.938477
Ran for 162050 frames Cell Events: 4244 mean_circ: 0.938507
Ran for 163550 frames Cell Events: 4288 mean_circ: 0.938465
Ran for 164550 frames Cell Events: 4323 mean_circ: 0.938393
Ran for 166050 frames Cell Events: 4366 mean_circ: 0.938342
Ran for 166550 frames Cell Events: 4383 mean_circ: 0.938242
Ran for 167050 frames Cell Events: 4399 mean_circ: 0.938273
Ran for 167550 frames Cell Events: 4417 mean_circ: 0.938257
Ran for 168550 frames Cell Events: 4455 mean_circ: 0.938094
Ran for 169550 frames Cell Events: 4487 mean_circ: 0.938048
Ran for 170050 frames Cell Events: 4500 mean_circ: 0.938061
Ran for 170550 frames Cell Events: 4512 mean_circ: 0.938007
Ran for 171050 frames Cell Events: 4521 mean_circ: 0.937963
Ran for 171550 frames Cell Events: 4534 mean_circ: 0.937985
Ran for 172050 frames Cell Events: 4546 mean_circ: 0.938014
Ran for 172550 frames Cell Events: 4560 mean_circ: 0.937965
Ran for 173050 frames Cell Events: 4578 mean_circ: 0.938006
Ran for 173550 frames Cell Events: 4590 mean_circ: 0.938046
Ran for 174050 frames Cell Events: 4602 mean_circ: 0.938083
Ran for 174550 frames Cell Events: 4615 mean_circ: 0.938066
Ran for 175050 frames Cell Events: 4630 mean_circ: 0.938119
Ran for 175550 frames Cell Events: 4651 mean_circ: 0.93813
Ran for 176050 frames Cell Events: 4660 mean_circ: 0.938149
Ran for 176550 frames Cell Events: 4667 mean_circ: 0.938163
Ran for 177050 frames Cell Events: 4678 mean_circ: 0.9382
Ran for 177550 frames Cell Events: 4686 mean_circ: 0.938204
Ran for 178050 frames Cell Events: 4703 mean_circ: 0.938226
Ran for 179050 frames Cell Events: 4744 mean_circ: 0.938264
Ran for 179550 frames Cell Events: 4752 mean_circ: 0.938225
Ran for 180050 frames Cell Events: 4768 mean_circ: 0.938271
Ran for 180550 frames Cell Events: 4779 mean_circ: 0.938267
Ran for 181050 frames Cell Events: 4787 mean_circ: 0.938256
Ran for 181550 frames Cell Events: 4792 mean_circ: 0.938248
Ran for 182050 frames Cell Events: 4808 mean_circ: 0.938206
Ran for 182550 frames Cell Events: 4817 mean_circ: 0.938197
Ran for 183050 frames Cell Events: 4832 mean_circ: 0.938131
Ran for 183550 frames Cell Events: 4845 mean_circ: 0.938102
Ran for 184550 frames Cell Events: 4868 mean_circ: 0.938132
Ran for 185050 frames Cell Events: 4879 mean_circ: 0.938103
Ran for 186050 frames Cell Events: 4898 mean_circ: 0.938108
Ran for 186550 frames Cell Events: 4910 mean_circ: 0.938142
Ran for 187050 frames Cell Events: 4929 mean_circ: 0.938102
Ran for 187550 frames Cell Events: 4955 mean_circ: 0.938138
Ran for 188050 frames Cell Events: 4966 mean_circ: 0.938165
Ran for 188550 frames Cell Events: 4990 mean_circ: 0.93816
Ran for 189050 frames Cell Events: 5006 mean_circ: 0.938208
Ran for 189550 frames Cell Events: 5012 mean_circ: 0.938215
Ran for 191050 frames Cell Events: 5039 mean_circ: 0.938124
Ran for 191550 frames Cell Events: 5052 mean_circ: 0.938111
Ran for 192050 frames Cell Events: 5067 mean_circ: 0.938158
Ran for 193550 frames Cell Events: 5112 mean_circ: 0.938222
Ran for 194050 frames Cell Events: 5128 mean_circ: 0.938242
Ran for 194550 frames Cell Events: 5148 mean_circ: 0.938247
Ran for 195050 frames Cell Events: 5159 mean_circ: 0.938224
Ran for 195550 frames Cell Events: 5170 mean_circ: 0.938267
Ran for 196050 frames Cell Events: 5185 mean_circ: 0.938269
Ran for 197050 frames Cell Events: 5208 mean_circ: 0.938325
Ran for 198050 frames Cell Events: 5232 mean_circ: 0.938302
Ran for 198550 frames Cell Events: 5250 mean_circ: 0.938269
Ran for 199050 frames Cell Events: 5263 mean_circ: 0.938264
Ran for 199550 frames Cell Events: 5276 mean_circ: 0.938287
Ran for 200050 frames Cell Events: 5290 mean_circ: 0.938252
Ran for 200550 frames Cell Events: 5316 mean_circ: 0.938242
Ran for 201050 frames Cell Events: 5326 mean_circ: 0.938296
Ran for 201550 frames Cell Events: 5333 mean_circ: 0.938311
Ran for 202050 frames Cell Events: 5351 mean_circ: 0.938315
Ran for 202550 frames Cell Events: 5364 mean_circ: 0.938311
Ran for 203050 frames Cell Events: 5381 mean_circ: 0.938252
Ran for 203550 frames Cell Events: 5388 mean_circ: 0.938267
Ran for 204050 frames Cell Events: 5396 mean_circ: 0.938291
Ran for 204550 frames Cell Events: 5407 mean_circ: 0.93829
Ran for 205050 frames Cell Events: 5422 mean_circ: 0.93833
Ran for 205550 frames Cell Events: 5437 mean_circ: 0.938345
Ran for 206050 frames Cell Events: 5454 mean_circ: 0.93834
Ran for 206550 frames Cell Events: 5466 mean_circ: 0.938341
Ran for 207050 frames Cell Events: 5480 mean_circ: 0.938353
Ran for 208050 frames Cell Events: 5509 mean_circ: 0.938429
Ran for 208550 frames Cell Events: 5528 mean_circ: 0.938348
Ran for 209550 frames Cell Events: 5559 mean_circ: 0.938386
Ran for 210050 frames Cell Events: 5580 mean_circ: 0.938314
Ran for 210550 frames Cell Events: 5592 mean_circ: 0.938311
Ran for 211050 frames Cell Events: 5612 mean_circ: 0.938246
Ran for 211550 frames Cell Events: 5625 mean_circ: 0.938257
Ran for 212050 frames Cell Events: 5641 mean_circ: 0.93827
Ran for 212550 frames Cell Events: 5655 mean_circ: 0.938268
Ran for 213550 frames Cell Events: 5707 mean_circ: 0.938226
Ran for 214050 frames Cell Events: 5721 mean_circ: 0.938185
Ran for 214550 frames Cell Events: 5731 mean_circ: 0.938192
Ran for 215050 frames Cell Events: 5753 mean_circ: 0.938138
Ran for 216050 frames Cell Events: 5772 mean_circ: 0.938118
Ran for 216550 frames Cell Events: 5779 mean_circ: 0.938111
Ran for 217050 frames Cell Events: 5790 mean_circ: 0.938112
Ran for 218050 frames Cell Events: 5818 mean_circ: 0.93805
Ran for 218550 frames Cell Events: 5826 mean_circ: 0.938038
Ran for 219050 frames Cell Events: 5836 mean_circ: 0.938056
Ran for 219550 frames Cell Events: 5847 mean_circ: 0.938059
Ran for 220050 frames Cell Events: 5857 mean_circ: 0.938051
Ran for 221050 frames Cell Events: 5884 mean_circ: 0.938027
Ran for 221550 frames Cell Events: 5895 mean_circ: 0.938012
Ran for 222050 frames Cell Events: 5905 mean_circ: 0.938007
Ran for 222550 frames Cell Events: 5915 mean_circ: 0.938011
Ran for 223050 frames Cell Events: 5942 mean_circ: 0.938028
Ran for 224550 frames Cell Events: 5989 mean_circ: 0.93798
Ran for 225050 frames Cell Events: 5997 mean_circ: 0.937982
Ran for 225550 frames Cell Events: 6017 mean_circ: 0.938008
Ran for 226050 frames Cell Events: 6025 mean_circ: 0.937957
Ran for 226550 frames Cell Events: 6040 mean_circ: 0.938
Ran for 227050 frames Cell Events: 6050 mean_circ: 0.938019
Ran for 228550 frames Cell Events: 6103 mean_circ: 0.938046
Ran for 229550 frames Cell Events: 6143 mean_circ: 0.938074
Ran for 230050 frames Cell Events: 6160 mean_circ: 0.938081
Ran for 230550 frames Cell Events: 6187 mean_circ: 0.93803
Ran for 231050 frames Cell Events: 6197 mean_circ: 0.937981
Ran for 231550 frames Cell Events: 6212 mean_circ: 0.937991
Ran for 232550 frames Cell Events: 6237 mean_circ: 0.937991
Ran for 233050 frames Cell Events: 6258 mean_circ: 0.937993
Ran for 233550 frames Cell Events: 6269 mean_circ: 0.938052
Ran for 234050 frames Cell Events: 6290 mean_circ: 0.938087
Ran for 234550 frames Cell Events: 6301 mean_circ: 0.938123
Ran for 235050 frames Cell Events: 6314 mean_circ: 0.938149
Ran for 236050 frames Cell Events: 6335 mean_circ: 0.938181
Ran for 236550 frames Cell Events: 6350 mean_circ: 0.938165
Ran for 237050 frames Cell Events: 6363 mean_circ: 0.938178
Ran for 237550 frames Cell Events: 6367 mean_circ: 0.938169
Ran for 238050 frames Cell Events: 6381 mean_circ: 0.93817
Ran for 238550 frames Cell Events: 6403 mean_circ: 0.938164
Ran for 240050 frames Cell Events: 6436 mean_circ: 0.938137
Ran for 240550 frames Cell Events: 6449 mean_circ: 0.938151
Ran for 242050 frames Cell Events: 6487 mean_circ: 0.938181
Ran for 242550 frames Cell Events: 6501 mean_circ: 0.938206
Ran for 243550 frames Cell Events: 6529 mean_circ: 0.938174
Ran for 244050 frames Cell Events: 6538 mean_circ: 0.938177
Ran for 244550 frames Cell Events: 6551 mean_circ: 0.938164
Ran for 245050 frames Cell Events: 6570 mean_circ: 0.938121
Ran for 245550 frames Cell Events: 6594 mean_circ: 0.938161
Ran for 246550 frames Cell Events: 6632 mean_circ: 0.938201
Ran for 247050 frames Cell Events: 6656 mean_circ: 0.938223
Ran for 247550 frames Cell Events: 6682 mean_circ: 0.938188
Ran for 248050 frames Cell Events: 6704 mean_circ: 0.938197
Ran for 248550 frames Cell Events: 6716 mean_circ: 0.938196
Ran for 249050 frames Cell Events: 6729 mean_circ: 0.938169
Ran for 250550 frames Cell Events: 6774 mean_circ: 0.938123
Ran for 251050 frames Cell Events: 6785 mean_circ: 0.938113
Ran for 252050 frames Cell Events: 6812 mean_circ: 0.938118
Ran for 252550 frames Cell Events: 6819 mean_circ: 0.938089
Ran for 253050 frames Cell Events: 6831 mean_circ: 0.938098
Ran for 253550 frames Cell Events: 6842 mean_circ: 0.938096
Ran for 254050 frames Cell Events: 6852 mean_circ: 0.938111
Ran for 254550 frames Cell Events: 6865 mean_circ: 0.938116
Ran for 256550 frames Cell Events: 6929 mean_circ: 0.938197
Ran for 257550 frames Cell Events: 6958 mean_circ: 0.938173
Ran for 258050 frames Cell Events: 6975 mean_circ: 0.938128
Ran for 258550 frames Cell Events: 6989 mean_circ: 0.938152
Ran for 259050 frames Cell Events: 7000 mean_circ: 0.938144
Ran for 260050 frames Cell Events: 7022 mean_circ: 0.938105
Ran for 260550 frames Cell Events: 7039 mean_circ: 0.938089
Ran for 261050 frames Cell Events: 7048 mean_circ: 0.938106
Ran for 261550 frames Cell Events: 7060 mean_circ: 0.938131
Ran for 262050 frames Cell Events: 7070 mean_circ: 0.938153
Ran for 262550 frames Cell Events: 7078 mean_circ: 0.938165
Ran for 263550 frames Cell Events: 7112 mean_circ: 0.938204
Ran for 264050 frames Cell Events: 7125 mean_circ: 0.938182
Ran for 265050 frames Cell Events: 7169 mean_circ: 0.938155
Ran for 265550 frames Cell Events: 7182 mean_circ: 0.938136
Ran for 266550 frames Cell Events: 7208 mean_circ: 0.938179
Ran for 267050 frames Cell Events: 7223 mean_circ: 0.938156
Ran for 267550 frames Cell Events: 7235 mean_circ: 0.938156
Ran for 268050 frames Cell Events: 7251 mean_circ: 0.938143
Ran for 268550 frames Cell Events: 7260 mean_circ: 0.938132
Ran for 269050 frames Cell Events: 7280 mean_circ: 0.938156
Ran for 269550 frames Cell Events: 7298 mean_circ: 0.938182
Ran for 270050 frames Cell Events: 7313 mean_circ: 0.938134
Ran for 270550 frames Cell Events: 7325 mean_circ: 0.938166
Ran for 271050 frames Cell Events: 7335 mean_circ: 0.938172
Ran for 271550 frames Cell Events: 7351 mean_circ: 0.938194
Ran for 272550 frames Cell Events: 7376 mean_circ: 0.938193
Ran for 273050 frames Cell Events: 7393 mean_circ: 0.938178
Ran for 274050 frames Cell Events: 7425 mean_circ: 0.938144
Ran for 275050 frames Cell Events: 7450 mean_circ: 0.938139
Ran for 275550 frames Cell Events: 7464 mean_circ: 0.93814
Ran for 276050 frames Cell Events: 7479 mean_circ: 0.938153
Ran for 276550 frames Cell Events: 7492 mean_circ: 0.938172
Ran for 277050 frames Cell Events: 7505 mean_circ: 0.938195
Ran for 279050 frames Cell Events: 7565 mean_circ: 0.938174
Ran for 281050 frames Cell Events: 7619 mean_circ: 0.938222
Ran for 281550 frames Cell Events: 7628 mean_circ: 0.938228
Ran for 282050 frames Cell Events: 7639 mean_circ: 0.938231
Ran for 282550 frames Cell Events: 7667 mean_circ: 0.938196
Ran for 283050 frames Cell Events: 7679 mean_circ: 0.938224
Ran for 283550 frames Cell Events: 7690 mean_circ: 0.93823
Ran for 285050 frames Cell Events: 7742 mean_circ: 0.938269
Ran for 285550 frames Cell Events: 7756 mean_circ: 0.938255
Ran for 286050 frames Cell Events: 7776 mean_circ: 0.938212
Ran for 286550 frames Cell Events: 7799 mean_circ: 0.938127
Ran for 288050 frames Cell Events: 7861 mean_circ: 0.938141
Ran for 288550 frames Cell Events: 7886 mean_circ: 0.938167
Ran for 289050 frames Cell Events: 7903 mean_circ: 0.938125
Ran for 289550 frames Cell Events: 7913 mean_circ: 0.938108
Ran for 290050 frames Cell Events: 7921 mean_circ: 0.938101
Ran for 290550 frames Cell Events: 7932 mean_circ: 0.93809
Ran for 291050 frames Cell Events: 7938 mean_circ: 0.938076
Ran for 291550 frames Cell Events: 7954 mean_circ: 0.938091
Ran for 292550 frames Cell Events: 7983 mean_circ: 0.938062
Ran for 293050 frames Cell Events: 7991 mean_circ: 0.938053
Ran for 293550 frames Cell Events: 8007 mean_circ: 0.938045
End this measurment..
Stopping time: 1.34075e+009
****************************************
Measurement finished
Mean Circularitiy: 0.938009
Mean Area: 619.195
Mean FL-1 intensity: 2610.02
Mean FL-2 intensity: 3882.17
Mean FL-3 intensity: 0
frames processed: 291763
Total Time: 147072ms
Number of Runs (new bg img) 0
Frames collected: 293987
Skipped frames: 102754
Rescued Frames: 4804902
Samples DAQ: 73497622
Samples written: 146994258
Samples per Channel: 73497129
FPS: 1998.93
Samples per second: 499734
Expected samples/s: 500000
Events: 8020
Events per second: 54.5309
jumped back (PMT): 5983
#Frames read, frequency
# 0 frames :388393
# 1 frames :180642
# 2 frames :6063
# 3 frames :1749
# 4 frames :869
# 5 frames :467
# 6 frames :2102
# 7 frames :2674
# 8 frames :1423
# 9 frames :599
# 10 frames :453
# 11 frames :623
# 12 frames :624
# 13 frames :268
# 14 frames :233
# 15 frames :168
# 16 frames :128
# 17 frames :111
# 18 frames :80
# 19 frames :47
# 20 frames :32
# 21 frames :43
# 22 frames :24
# 23 frames :26
# 24 frames :17
# 25 frames :16
# 26 frames :15
# 27 frames :10
# 28 frames :6
# 29 frames :7
# 30 frames :3
# 32 frames :3
# 33 frames :6
# 34 frames :1
# 35 frames :3
# 36 frames :2
# 37 frames :3
# 40 frames :3
# 46 frames :1
# 47 frames :1
# 52 frames :1
# 66 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8935
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0