Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_18.52.08
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "a27533b06257a574b35d643b9261ceda",
"name": "M1_20170521_1538_dsRNA_A8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:52:38"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8222 (max 8223) in '8222'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7117
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.44533e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 2 mean_circ: 0.930691
Ran for 550 frames Cell Events: 24 mean_circ: 0.928957
Ran for 1050 frames Cell Events: 37 mean_circ: 0.920954
Ran for 1550 frames Cell Events: 46 mean_circ: 0.924484
Ran for 2050 frames Cell Events: 61 mean_circ: 0.929287
Ran for 2550 frames Cell Events: 74 mean_circ: 0.927033
Ran for 3050 frames Cell Events: 91 mean_circ: 0.926575
Ran for 3550 frames Cell Events: 107 mean_circ: 0.92961
Ran for 4050 frames Cell Events: 124 mean_circ: 0.929336
Ran for 6050 frames Cell Events: 198 mean_circ: 0.931465
Ran for 6550 frames Cell Events: 209 mean_circ: 0.931234
Ran for 7050 frames Cell Events: 224 mean_circ: 0.932662
Ran for 7550 frames Cell Events: 230 mean_circ: 0.933685
Ran for 8050 frames Cell Events: 236 mean_circ: 0.934094
Ran for 8550 frames Cell Events: 240 mean_circ: 0.93417
Ran for 9050 frames Cell Events: 258 mean_circ: 0.934024
Ran for 9550 frames Cell Events: 275 mean_circ: 0.933398
Ran for 10050 frames Cell Events: 290 mean_circ: 0.93355
Ran for 10550 frames Cell Events: 295 mean_circ: 0.933726
Ran for 11050 frames Cell Events: 302 mean_circ: 0.934326
Ran for 12050 frames Cell Events: 330 mean_circ: 0.935702
Ran for 12550 frames Cell Events: 343 mean_circ: 0.935999
Ran for 13550 frames Cell Events: 380 mean_circ: 0.936211
Ran for 14050 frames Cell Events: 391 mean_circ: 0.936615
Ran for 14550 frames Cell Events: 402 mean_circ: 0.936791
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Ran for 15550 frames Cell Events: 420 mean_circ: 0.937046
Ran for 16050 frames Cell Events: 436 mean_circ: 0.937241
Ran for 16550 frames Cell Events: 459 mean_circ: 0.936971
Ran for 17050 frames Cell Events: 468 mean_circ: 0.937066
Ran for 17550 frames Cell Events: 485 mean_circ: 0.936523
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Ran for 18550 frames Cell Events: 505 mean_circ: 0.936695
Ran for 19050 frames Cell Events: 509 mean_circ: 0.93691
Ran for 19550 frames Cell Events: 513 mean_circ: 0.93698
Ran for 20050 frames Cell Events: 527 mean_circ: 0.936944
Ran for 20550 frames Cell Events: 544 mean_circ: 0.93703
Ran for 21050 frames Cell Events: 556 mean_circ: 0.936832
Ran for 21550 frames Cell Events: 569 mean_circ: 0.93707
Ran for 22050 frames Cell Events: 581 mean_circ: 0.937059
Ran for 23050 frames Cell Events: 601 mean_circ: 0.937283
Ran for 24050 frames Cell Events: 624 mean_circ: 0.937398
Ran for 24550 frames Cell Events: 631 mean_circ: 0.93713
Ran for 25050 frames Cell Events: 642 mean_circ: 0.937323
Ran for 25550 frames Cell Events: 647 mean_circ: 0.937552
Ran for 26050 frames Cell Events: 657 mean_circ: 0.937879
Ran for 26550 frames Cell Events: 680 mean_circ: 0.937836
Ran for 27050 frames Cell Events: 686 mean_circ: 0.937564
Ran for 27550 frames Cell Events: 697 mean_circ: 0.937484
Ran for 28050 frames Cell Events: 709 mean_circ: 0.937828
Ran for 29050 frames Cell Events: 734 mean_circ: 0.937691
Ran for 30050 frames Cell Events: 753 mean_circ: 0.937704
Ran for 30550 frames Cell Events: 756 mean_circ: 0.937842
Ran for 31050 frames Cell Events: 761 mean_circ: 0.937856
Ran for 31550 frames Cell Events: 767 mean_circ: 0.937951
Ran for 32050 frames Cell Events: 780 mean_circ: 0.938114
Ran for 32550 frames Cell Events: 792 mean_circ: 0.937726
Ran for 33050 frames Cell Events: 806 mean_circ: 0.937896
Ran for 33550 frames Cell Events: 810 mean_circ: 0.937794
Ran for 34550 frames Cell Events: 836 mean_circ: 0.937714
Ran for 35550 frames Cell Events: 852 mean_circ: 0.937655
Ran for 36550 frames Cell Events: 872 mean_circ: 0.937975
Ran for 37050 frames Cell Events: 884 mean_circ: 0.938182
Ran for 37550 frames Cell Events: 896 mean_circ: 0.938176
Ran for 38550 frames Cell Events: 918 mean_circ: 0.937783
Ran for 39050 frames Cell Events: 933 mean_circ: 0.937926
Ran for 39550 frames Cell Events: 940 mean_circ: 0.937966
Ran for 40050 frames Cell Events: 951 mean_circ: 0.938087
Ran for 40550 frames Cell Events: 964 mean_circ: 0.938164
Ran for 41550 frames Cell Events: 983 mean_circ: 0.938165
Ran for 42050 frames Cell Events: 996 mean_circ: 0.938119
Ran for 42550 frames Cell Events: 1001 mean_circ: 0.938109
Ran for 43050 frames Cell Events: 1022 mean_circ: 0.937932
Ran for 43550 frames Cell Events: 1036 mean_circ: 0.938144
Ran for 44050 frames Cell Events: 1047 mean_circ: 0.938058
Ran for 44550 frames Cell Events: 1059 mean_circ: 0.938183
Ran for 45050 frames Cell Events: 1070 mean_circ: 0.938186
Ran for 45550 frames Cell Events: 1086 mean_circ: 0.938247
Ran for 46050 frames Cell Events: 1095 mean_circ: 0.938249
Ran for 47550 frames Cell Events: 1140 mean_circ: 0.938076
Ran for 48050 frames Cell Events: 1149 mean_circ: 0.93809
Ran for 48550 frames Cell Events: 1158 mean_circ: 0.938173
Ran for 49050 frames Cell Events: 1167 mean_circ: 0.938289
Ran for 50050 frames Cell Events: 1198 mean_circ: 0.938434
Ran for 50550 frames Cell Events: 1208 mean_circ: 0.938508
Ran for 51050 frames Cell Events: 1227 mean_circ: 0.93873
Ran for 51550 frames Cell Events: 1242 mean_circ: 0.93873
Ran for 52050 frames Cell Events: 1258 mean_circ: 0.938923
Ran for 52550 frames Cell Events: 1268 mean_circ: 0.93898
Ran for 54050 frames Cell Events: 1313 mean_circ: 0.938783
Ran for 54550 frames Cell Events: 1331 mean_circ: 0.938872
Ran for 55050 frames Cell Events: 1337 mean_circ: 0.939023
Ran for 55550 frames Cell Events: 1355 mean_circ: 0.939179
Ran for 56050 frames Cell Events: 1378 mean_circ: 0.939353
Ran for 56550 frames Cell Events: 1395 mean_circ: 0.939503
Ran for 57050 frames Cell Events: 1403 mean_circ: 0.939451
Ran for 57550 frames Cell Events: 1412 mean_circ: 0.939523
Ran for 58550 frames Cell Events: 1442 mean_circ: 0.939507
Ran for 59050 frames Cell Events: 1453 mean_circ: 0.939521
Ran for 59550 frames Cell Events: 1459 mean_circ: 0.939483
Ran for 60050 frames Cell Events: 1485 mean_circ: 0.93944
Ran for 60550 frames Cell Events: 1500 mean_circ: 0.939463
Ran for 61050 frames Cell Events: 1511 mean_circ: 0.939442
Ran for 61550 frames Cell Events: 1524 mean_circ: 0.939372
Ran for 62050 frames Cell Events: 1535 mean_circ: 0.939318
Ran for 62550 frames Cell Events: 1540 mean_circ: 0.939375
Ran for 63050 frames Cell Events: 1548 mean_circ: 0.939365
Ran for 63550 frames Cell Events: 1555 mean_circ: 0.939358
Ran for 64550 frames Cell Events: 1577 mean_circ: 0.939251
Ran for 65050 frames Cell Events: 1596 mean_circ: 0.939235
Ran for 65550 frames Cell Events: 1602 mean_circ: 0.93923
Ran for 66050 frames Cell Events: 1610 mean_circ: 0.939079
Ran for 66550 frames Cell Events: 1626 mean_circ: 0.93915
Ran for 68050 frames Cell Events: 1650 mean_circ: 0.939064
Ran for 69050 frames Cell Events: 1699 mean_circ: 0.939099
Ran for 69550 frames Cell Events: 1708 mean_circ: 0.939161
Ran for 70050 frames Cell Events: 1715 mean_circ: 0.939208
Ran for 70550 frames Cell Events: 1732 mean_circ: 0.939063
Ran for 71050 frames Cell Events: 1745 mean_circ: 0.939194
Ran for 71550 frames Cell Events: 1756 mean_circ: 0.939076
Ran for 72050 frames Cell Events: 1769 mean_circ: 0.93914
Ran for 73050 frames Cell Events: 1799 mean_circ: 0.938737
Ran for 73550 frames Cell Events: 1813 mean_circ: 0.938714
Ran for 74050 frames Cell Events: 1822 mean_circ: 0.938694
Ran for 75050 frames Cell Events: 1869 mean_circ: 0.938676
Ran for 76050 frames Cell Events: 1897 mean_circ: 0.93848
Ran for 76550 frames Cell Events: 1905 mean_circ: 0.938422
Ran for 77550 frames Cell Events: 1929 mean_circ: 0.938388
Ran for 78050 frames Cell Events: 1937 mean_circ: 0.938361
Ran for 78550 frames Cell Events: 1946 mean_circ: 0.938277
Ran for 79050 frames Cell Events: 1958 mean_circ: 0.938143
Ran for 79550 frames Cell Events: 1973 mean_circ: 0.938337
Ran for 80050 frames Cell Events: 1985 mean_circ: 0.938285
Ran for 81050 frames Cell Events: 2005 mean_circ: 0.938242
Ran for 81550 frames Cell Events: 2011 mean_circ: 0.938203
Ran for 82050 frames Cell Events: 2024 mean_circ: 0.938182
Ran for 82550 frames Cell Events: 2035 mean_circ: 0.93822
Ran for 83050 frames Cell Events: 2051 mean_circ: 0.938372
Ran for 84050 frames Cell Events: 2082 mean_circ: 0.938385
Ran for 84550 frames Cell Events: 2095 mean_circ: 0.93836
Ran for 85050 frames Cell Events: 2103 mean_circ: 0.938429
Ran for 85550 frames Cell Events: 2119 mean_circ: 0.938102
Ran for 86050 frames Cell Events: 2132 mean_circ: 0.937867
Ran for 86550 frames Cell Events: 2141 mean_circ: 0.937774
Ran for 87050 frames Cell Events: 2154 mean_circ: 0.93782
Ran for 87550 frames Cell Events: 2163 mean_circ: 0.937864
Ran for 88050 frames Cell Events: 2182 mean_circ: 0.937881
Ran for 88550 frames Cell Events: 2196 mean_circ: 0.937875
Ran for 89050 frames Cell Events: 2213 mean_circ: 0.938001
Ran for 89550 frames Cell Events: 2227 mean_circ: 0.938011
Ran for 90050 frames Cell Events: 2241 mean_circ: 0.937997
Ran for 90550 frames Cell Events: 2246 mean_circ: 0.937979
Ran for 91050 frames Cell Events: 2260 mean_circ: 0.937944
Ran for 91550 frames Cell Events: 2269 mean_circ: 0.937968
Ran for 92050 frames Cell Events: 2281 mean_circ: 0.937932
Ran for 92550 frames Cell Events: 2296 mean_circ: 0.937795
Ran for 93050 frames Cell Events: 2314 mean_circ: 0.937671
Ran for 94050 frames Cell Events: 2350 mean_circ: 0.937777
Ran for 94550 frames Cell Events: 2361 mean_circ: 0.937805
Ran for 95550 frames Cell Events: 2382 mean_circ: 0.937819
Ran for 96050 frames Cell Events: 2399 mean_circ: 0.937758
Ran for 96550 frames Cell Events: 2410 mean_circ: 0.937793
Ran for 97050 frames Cell Events: 2423 mean_circ: 0.937843
Ran for 98050 frames Cell Events: 2448 mean_circ: 0.937802
Ran for 98550 frames Cell Events: 2467 mean_circ: 0.937814
Ran for 99050 frames Cell Events: 2477 mean_circ: 0.93786
Ran for 100050 frames Cell Events: 2521 mean_circ: 0.93788
Ran for 100550 frames Cell Events: 2534 mean_circ: 0.937977
Ran for 101050 frames Cell Events: 2544 mean_circ: 0.938014
Ran for 102050 frames Cell Events: 2567 mean_circ: 0.937957
Ran for 102550 frames Cell Events: 2580 mean_circ: 0.93791
Ran for 104050 frames Cell Events: 2624 mean_circ: 0.937625
Ran for 104550 frames Cell Events: 2635 mean_circ: 0.937626
Ran for 106050 frames Cell Events: 2679 mean_circ: 0.937661
Ran for 106550 frames Cell Events: 2687 mean_circ: 0.937608
Ran for 107050 frames Cell Events: 2699 mean_circ: 0.937508
Ran for 107550 frames Cell Events: 2708 mean_circ: 0.937509
Ran for 108050 frames Cell Events: 2728 mean_circ: 0.937456
Ran for 108550 frames Cell Events: 2733 mean_circ: 0.937475
Ran for 109050 frames Cell Events: 2748 mean_circ: 0.937516
Ran for 109550 frames Cell Events: 2760 mean_circ: 0.937507
Ran for 110050 frames Cell Events: 2769 mean_circ: 0.937608
Ran for 110550 frames Cell Events: 2781 mean_circ: 0.937704
Ran for 111050 frames Cell Events: 2791 mean_circ: 0.937755
Ran for 111550 frames Cell Events: 2815 mean_circ: 0.937674
Ran for 112050 frames Cell Events: 2828 mean_circ: 0.937736
Ran for 112550 frames Cell Events: 2844 mean_circ: 0.937796
Ran for 113050 frames Cell Events: 2866 mean_circ: 0.937859
Ran for 114050 frames Cell Events: 2895 mean_circ: 0.937814
Ran for 115050 frames Cell Events: 2914 mean_circ: 0.937891
Ran for 115550 frames Cell Events: 2937 mean_circ: 0.937919
Ran for 116550 frames Cell Events: 2966 mean_circ: 0.937917
Ran for 117050 frames Cell Events: 2977 mean_circ: 0.93795
Ran for 117550 frames Cell Events: 2994 mean_circ: 0.93798
Ran for 118050 frames Cell Events: 3009 mean_circ: 0.937946
Ran for 119050 frames Cell Events: 3024 mean_circ: 0.93801
Ran for 120050 frames Cell Events: 3071 mean_circ: 0.938117
Ran for 120550 frames Cell Events: 3087 mean_circ: 0.938156
Ran for 121550 frames Cell Events: 3121 mean_circ: 0.938314
Ran for 122050 frames Cell Events: 3139 mean_circ: 0.938353
Ran for 122550 frames Cell Events: 3154 mean_circ: 0.938377
Ran for 123550 frames Cell Events: 3187 mean_circ: 0.938432
Ran for 124050 frames Cell Events: 3214 mean_circ: 0.938155
Ran for 125050 frames Cell Events: 3254 mean_circ: 0.9381
Ran for 125550 frames Cell Events: 3266 mean_circ: 0.938125
Ran for 126050 frames Cell Events: 3281 mean_circ: 0.93815
Ran for 126550 frames Cell Events: 3297 mean_circ: 0.938133
Ran for 127050 frames Cell Events: 3307 mean_circ: 0.938191
Ran for 127550 frames Cell Events: 3321 mean_circ: 0.938166
Ran for 128050 frames Cell Events: 3337 mean_circ: 0.938179
Ran for 128550 frames Cell Events: 3347 mean_circ: 0.938164
Ran for 129050 frames Cell Events: 3359 mean_circ: 0.938199
Ran for 130050 frames Cell Events: 3389 mean_circ: 0.93818
Ran for 131050 frames Cell Events: 3425 mean_circ: 0.938119
Ran for 131550 frames Cell Events: 3444 mean_circ: 0.938129
Ran for 132050 frames Cell Events: 3463 mean_circ: 0.938181
Ran for 133050 frames Cell Events: 3505 mean_circ: 0.938159
Ran for 133550 frames Cell Events: 3515 mean_circ: 0.938158
Ran for 134050 frames Cell Events: 3529 mean_circ: 0.938189
Ran for 134550 frames Cell Events: 3538 mean_circ: 0.938165
Ran for 135050 frames Cell Events: 3556 mean_circ: 0.938159
Ran for 135550 frames Cell Events: 3581 mean_circ: 0.938021
Ran for 136550 frames Cell Events: 3598 mean_circ: 0.938086
Ran for 137050 frames Cell Events: 3614 mean_circ: 0.938022
Ran for 137550 frames Cell Events: 3632 mean_circ: 0.938062
Ran for 138050 frames Cell Events: 3652 mean_circ: 0.938063
Ran for 139050 frames Cell Events: 3695 mean_circ: 0.937932
Ran for 139550 frames Cell Events: 3712 mean_circ: 0.937939
Ran for 140550 frames Cell Events: 3752 mean_circ: 0.937947
Ran for 141050 frames Cell Events: 3760 mean_circ: 0.937933
Ran for 141550 frames Cell Events: 3788 mean_circ: 0.93796
Ran for 142050 frames Cell Events: 3809 mean_circ: 0.938016
Ran for 143050 frames Cell Events: 3834 mean_circ: 0.938117
Ran for 144050 frames Cell Events: 3869 mean_circ: 0.93808
Ran for 144550 frames Cell Events: 3880 mean_circ: 0.938089
Ran for 145050 frames Cell Events: 3892 mean_circ: 0.938126
Ran for 145550 frames Cell Events: 3907 mean_circ: 0.938098
Ran for 146050 frames Cell Events: 3921 mean_circ: 0.938076
Ran for 147550 frames Cell Events: 3971 mean_circ: 0.938237
Ran for 148050 frames Cell Events: 3988 mean_circ: 0.938218
Ran for 148550 frames Cell Events: 4005 mean_circ: 0.938283
Ran for 149050 frames Cell Events: 4034 mean_circ: 0.938204
Ran for 149550 frames Cell Events: 4053 mean_circ: 0.938322
Ran for 150050 frames Cell Events: 4067 mean_circ: 0.938341
Ran for 151050 frames Cell Events: 4089 mean_circ: 0.93838
Ran for 152050 frames Cell Events: 4126 mean_circ: 0.93831
Ran for 152550 frames Cell Events: 4146 mean_circ: 0.938246
Ran for 153550 frames Cell Events: 4187 mean_circ: 0.938222
Ran for 154050 frames Cell Events: 4208 mean_circ: 0.938211
Ran for 154550 frames Cell Events: 4222 mean_circ: 0.938117
Ran for 155050 frames Cell Events: 4240 mean_circ: 0.938165
Ran for 155550 frames Cell Events: 4262 mean_circ: 0.938136
Ran for 156050 frames Cell Events: 4281 mean_circ: 0.938151
Ran for 156550 frames Cell Events: 4296 mean_circ: 0.938151
Ran for 157050 frames Cell Events: 4310 mean_circ: 0.938241
Ran for 157550 frames Cell Events: 4323 mean_circ: 0.938252
Ran for 158550 frames Cell Events: 4350 mean_circ: 0.938189
Ran for 159550 frames Cell Events: 4379 mean_circ: 0.93817
Ran for 161050 frames Cell Events: 4419 mean_circ: 0.93811
Ran for 161550 frames Cell Events: 4442 mean_circ: 0.93804
Ran for 162050 frames Cell Events: 4456 mean_circ: 0.938086
Ran for 162550 frames Cell Events: 4467 mean_circ: 0.938116
Ran for 163050 frames Cell Events: 4479 mean_circ: 0.938026
Ran for 163550 frames Cell Events: 4494 mean_circ: 0.938026
Ran for 164050 frames Cell Events: 4506 mean_circ: 0.938014
Ran for 164550 frames Cell Events: 4521 mean_circ: 0.938059
Ran for 165550 frames Cell Events: 4555 mean_circ: 0.938043
Ran for 166050 frames Cell Events: 4573 mean_circ: 0.938059
Ran for 166550 frames Cell Events: 4593 mean_circ: 0.938066
Ran for 167550 frames Cell Events: 4627 mean_circ: 0.938079
Ran for 168050 frames Cell Events: 4639 mean_circ: 0.938124
Ran for 169050 frames Cell Events: 4661 mean_circ: 0.93812
Ran for 170050 frames Cell Events: 4677 mean_circ: 0.938158
Ran for 170550 frames Cell Events: 4696 mean_circ: 0.93814
Ran for 171550 frames Cell Events: 4730 mean_circ: 0.938134
Ran for 172050 frames Cell Events: 4739 mean_circ: 0.938155
Ran for 172550 frames Cell Events: 4747 mean_circ: 0.938166
Ran for 173050 frames Cell Events: 4755 mean_circ: 0.938171
Ran for 173550 frames Cell Events: 4771 mean_circ: 0.938207
Ran for 174050 frames Cell Events: 4800 mean_circ: 0.938159
Ran for 174550 frames Cell Events: 4816 mean_circ: 0.938163
Ran for 175550 frames Cell Events: 4845 mean_circ: 0.938067
Ran for 176050 frames Cell Events: 4864 mean_circ: 0.938094
Ran for 176550 frames Cell Events: 4883 mean_circ: 0.938081
Ran for 177050 frames Cell Events: 4903 mean_circ: 0.938019
Ran for 178050 frames Cell Events: 4934 mean_circ: 0.938065
Ran for 178550 frames Cell Events: 4949 mean_circ: 0.93806
Ran for 180050 frames Cell Events: 5006 mean_circ: 0.938066
Ran for 180550 frames Cell Events: 5025 mean_circ: 0.938076
Ran for 181050 frames Cell Events: 5037 mean_circ: 0.938108
Ran for 181550 frames Cell Events: 5045 mean_circ: 0.938135
Ran for 182050 frames Cell Events: 5064 mean_circ: 0.938169
Ran for 182550 frames Cell Events: 5087 mean_circ: 0.93817
Ran for 183550 frames Cell Events: 5114 mean_circ: 0.938181
Ran for 184050 frames Cell Events: 5121 mean_circ: 0.938142
Ran for 184550 frames Cell Events: 5128 mean_circ: 0.938156
Ran for 185050 frames Cell Events: 5146 mean_circ: 0.938165
Ran for 185550 frames Cell Events: 5162 mean_circ: 0.938189
Ran for 186050 frames Cell Events: 5173 mean_circ: 0.938165
Ran for 186550 frames Cell Events: 5191 mean_circ: 0.938173
Ran for 187050 frames Cell Events: 5201 mean_circ: 0.938131
Ran for 188050 frames Cell Events: 5235 mean_circ: 0.938172
Ran for 188550 frames Cell Events: 5261 mean_circ: 0.938227
Ran for 189050 frames Cell Events: 5279 mean_circ: 0.938208
Ran for 189550 frames Cell Events: 5288 mean_circ: 0.938244
Ran for 190050 frames Cell Events: 5309 mean_circ: 0.93826
Ran for 190550 frames Cell Events: 5324 mean_circ: 0.938249
Ran for 191050 frames Cell Events: 5340 mean_circ: 0.93825
Ran for 191550 frames Cell Events: 5358 mean_circ: 0.938306
Ran for 192050 frames Cell Events: 5377 mean_circ: 0.938318
Ran for 192550 frames Cell Events: 5393 mean_circ: 0.938324
Ran for 193050 frames Cell Events: 5415 mean_circ: 0.938321
Ran for 194050 frames Cell Events: 5443 mean_circ: 0.938343
Ran for 194550 frames Cell Events: 5459 mean_circ: 0.938344
Ran for 195550 frames Cell Events: 5488 mean_circ: 0.938398
Ran for 196050 frames Cell Events: 5496 mean_circ: 0.938337
Ran for 197050 frames Cell Events: 5515 mean_circ: 0.938378
Ran for 197550 frames Cell Events: 5526 mean_circ: 0.938353
Ran for 198050 frames Cell Events: 5537 mean_circ: 0.938384
Ran for 198550 frames Cell Events: 5554 mean_circ: 0.93836
Ran for 199050 frames Cell Events: 5563 mean_circ: 0.938372
Ran for 199550 frames Cell Events: 5587 mean_circ: 0.938378
Ran for 200050 frames Cell Events: 5595 mean_circ: 0.938327
Ran for 200550 frames Cell Events: 5609 mean_circ: 0.938355
Ran for 201050 frames Cell Events: 5617 mean_circ: 0.938341
Ran for 201550 frames Cell Events: 5637 mean_circ: 0.93833
Ran for 202050 frames Cell Events: 5650 mean_circ: 0.938248
Ran for 202550 frames Cell Events: 5669 mean_circ: 0.938325
Ran for 203050 frames Cell Events: 5688 mean_circ: 0.938292
Ran for 203550 frames Cell Events: 5702 mean_circ: 0.938289
Ran for 204550 frames Cell Events: 5739 mean_circ: 0.93818
Ran for 205050 frames Cell Events: 5756 mean_circ: 0.938199
Ran for 206050 frames Cell Events: 5785 mean_circ: 0.938299
Ran for 206550 frames Cell Events: 5789 mean_circ: 0.93833
Ran for 207050 frames Cell Events: 5798 mean_circ: 0.938368
Ran for 208050 frames Cell Events: 5835 mean_circ: 0.938389
Ran for 208550 frames Cell Events: 5848 mean_circ: 0.938426
Ran for 209050 frames Cell Events: 5864 mean_circ: 0.938438
Ran for 209550 frames Cell Events: 5885 mean_circ: 0.93845
Ran for 210050 frames Cell Events: 5898 mean_circ: 0.938448
Ran for 211050 frames Cell Events: 5938 mean_circ: 0.938417
Ran for 211550 frames Cell Events: 5954 mean_circ: 0.938399
Ran for 213050 frames Cell Events: 6012 mean_circ: 0.938447
Ran for 214050 frames Cell Events: 6041 mean_circ: 0.938476
Ran for 214550 frames Cell Events: 6058 mean_circ: 0.938442
Ran for 215050 frames Cell Events: 6076 mean_circ: 0.938491
Ran for 215550 frames Cell Events: 6092 mean_circ: 0.938435
Ran for 216050 frames Cell Events: 6107 mean_circ: 0.938392
Ran for 216550 frames Cell Events: 6124 mean_circ: 0.938421
Ran for 217050 frames Cell Events: 6141 mean_circ: 0.938447
Ran for 217550 frames Cell Events: 6157 mean_circ: 0.938484
Ran for 218050 frames Cell Events: 6170 mean_circ: 0.938496
Ran for 219050 frames Cell Events: 6189 mean_circ: 0.938486
Ran for 219550 frames Cell Events: 6200 mean_circ: 0.938453
Ran for 220050 frames Cell Events: 6220 mean_circ: 0.938376
Ran for 222050 frames Cell Events: 6273 mean_circ: 0.938379
Ran for 222550 frames Cell Events: 6292 mean_circ: 0.938405
Ran for 223050 frames Cell Events: 6310 mean_circ: 0.938375
Ran for 223550 frames Cell Events: 6334 mean_circ: 0.9384
Ran for 225050 frames Cell Events: 6407 mean_circ: 0.938386
Ran for 225550 frames Cell Events: 6426 mean_circ: 0.938324
Ran for 226050 frames Cell Events: 6439 mean_circ: 0.938313
Ran for 227550 frames Cell Events: 6482 mean_circ: 0.938376
Ran for 228050 frames Cell Events: 6503 mean_circ: 0.938369
Ran for 228550 frames Cell Events: 6531 mean_circ: 0.93833
Ran for 229050 frames Cell Events: 6552 mean_circ: 0.938331
Ran for 229550 frames Cell Events: 6562 mean_circ: 0.938337
Ran for 230050 frames Cell Events: 6576 mean_circ: 0.938272
Ran for 230550 frames Cell Events: 6586 mean_circ: 0.938271
Ran for 231050 frames Cell Events: 6610 mean_circ: 0.938265
Ran for 231550 frames Cell Events: 6622 mean_circ: 0.938305
Ran for 232050 frames Cell Events: 6637 mean_circ: 0.93833
Ran for 233050 frames Cell Events: 6672 mean_circ: 0.938353
Ran for 234050 frames Cell Events: 6721 mean_circ: 0.938411
Ran for 234550 frames Cell Events: 6742 mean_circ: 0.93842
Ran for 235050 frames Cell Events: 6755 mean_circ: 0.938361
Ran for 235550 frames Cell Events: 6772 mean_circ: 0.938371
Ran for 236050 frames Cell Events: 6788 mean_circ: 0.93838
Ran for 237550 frames Cell Events: 6845 mean_circ: 0.938451
Ran for 238550 frames Cell Events: 6884 mean_circ: 0.938481
Ran for 240550 frames Cell Events: 7002 mean_circ: 0.938444
Ran for 241050 frames Cell Events: 7028 mean_circ: 0.938444
Ran for 241550 frames Cell Events: 7049 mean_circ: 0.938448
Ran for 243550 frames Cell Events: 7120 mean_circ: 0.938493
Ran for 244050 frames Cell Events: 7141 mean_circ: 0.938477
Ran for 244550 frames Cell Events: 7150 mean_circ: 0.938448
Ran for 245050 frames Cell Events: 7172 mean_circ: 0.938424
Ran for 245550 frames Cell Events: 7184 mean_circ: 0.938457
Ran for 246550 frames Cell Events: 7222 mean_circ: 0.938397
Ran for 247050 frames Cell Events: 7238 mean_circ: 0.938417
Ran for 248050 frames Cell Events: 7264 mean_circ: 0.938403
Ran for 249550 frames Cell Events: 7312 mean_circ: 0.938413
Ran for 250050 frames Cell Events: 7326 mean_circ: 0.938433
Ran for 250550 frames Cell Events: 7341 mean_circ: 0.938445
Ran for 251050 frames Cell Events: 7360 mean_circ: 0.938428
Ran for 251550 frames Cell Events: 7394 mean_circ: 0.93848
Ran for 252550 frames Cell Events: 7434 mean_circ: 0.93843
Ran for 253050 frames Cell Events: 7449 mean_circ: 0.938443
Ran for 253550 frames Cell Events: 7462 mean_circ: 0.938465
Ran for 254050 frames Cell Events: 7472 mean_circ: 0.938456
Ran for 254550 frames Cell Events: 7490 mean_circ: 0.938452
Ran for 255050 frames Cell Events: 7501 mean_circ: 0.938456
Ran for 255550 frames Cell Events: 7511 mean_circ: 0.938455
Ran for 256050 frames Cell Events: 7529 mean_circ: 0.938472
Ran for 257050 frames Cell Events: 7574 mean_circ: 0.93846
Ran for 257550 frames Cell Events: 7588 mean_circ: 0.938431
Ran for 258050 frames Cell Events: 7608 mean_circ: 0.938412
Ran for 259050 frames Cell Events: 7644 mean_circ: 0.938398
Ran for 259550 frames Cell Events: 7658 mean_circ: 0.938397
Ran for 260050 frames Cell Events: 7674 mean_circ: 0.938394
Ran for 260550 frames Cell Events: 7684 mean_circ: 0.938382
Ran for 261050 frames Cell Events: 7702 mean_circ: 0.938373
Ran for 261550 frames Cell Events: 7720 mean_circ: 0.938365
Ran for 262050 frames Cell Events: 7752 mean_circ: 0.938347
Ran for 264050 frames Cell Events: 7848 mean_circ: 0.938425
Ran for 264550 frames Cell Events: 7871 mean_circ: 0.938448
Ran for 265050 frames Cell Events: 7887 mean_circ: 0.938444
Ran for 265550 frames Cell Events: 7912 mean_circ: 0.93848
Ran for 266050 frames Cell Events: 7926 mean_circ: 0.938514
Ran for 266550 frames Cell Events: 7945 mean_circ: 0.938489
Ran for 267050 frames Cell Events: 7960 mean_circ: 0.93847
Ran for 267550 frames Cell Events: 7982 mean_circ: 0.938462
Ran for 268050 frames Cell Events: 7999 mean_circ: 0.93843
Ran for 268550 frames Cell Events: 8014 mean_circ: 0.938433
Ran for 269050 frames Cell Events: 8027 mean_circ: 0.938431
Ran for 269550 frames Cell Events: 8042 mean_circ: 0.938424
Ran for 271550 frames Cell Events: 8110 mean_circ: 0.938463
Ran for 272550 frames Cell Events: 8148 mean_circ: 0.938528
Ran for 273550 frames Cell Events: 8191 mean_circ: 0.938618
Ran for 274050 frames Cell Events: 8211 mean_circ: 0.938616
Ran for 274550 frames Cell Events: 8221 mean_circ: 0.938654
End this measurment..
Stopping time: 5.4467e+008
****************************************
Measurement finished
Mean Circularitiy: 0.938661
Mean Area: 642.679
Mean FL-1 intensity: 3307.36
Mean FL-2 intensity: 4165.73
Mean FL-3 intensity: 0
frames processed: 273627
Total Time: 137352ms
Number of Runs (new bg img) 0
Frames collected: 274588
Skipped frames: 19533
Rescued Frames: 882717
Samples DAQ: 68647520
Samples written: 137293804
Samples per Channel: 68646902
FPS: 1999.15
Samples per second: 499786
Expected samples/s: 500000
Events: 8223
Events per second: 59.8679
jumped back (PMT): 5249
#Frames read, frequency
# 0 frames :366126
# 1 frames :165549
# 2 frames :5101
# 3 frames :1772
# 4 frames :781
# 5 frames :283
# 6 frames :2570
# 7 frames :1896
# 8 frames :1270
# 9 frames :546
# 10 frames :650
# 11 frames :722
# 12 frames :525
# 13 frames :268
# 14 frames :236
# 15 frames :194
# 16 frames :141
# 17 frames :112
# 18 frames :62
# 19 frames :59
# 20 frames :57
# 21 frames :42
# 22 frames :34
# 23 frames :26
# 24 frames :22
# 25 frames :18
# 26 frames :9
# 27 frames :17
# 28 frames :10
# 29 frames :9
# 30 frames :6
# 31 frames :4
# 32 frames :8
# 33 frames :12
# 34 frames :6
# 35 frames :5
# 36 frames :5
# 37 frames :2
# 39 frames :2
# 40 frames :1
# 42 frames :2
# 47 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7117
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0