Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_18.57.03
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "9d150bdb5847a40689724e7518e60d39",
"name": "M1_20170521_1627_dsRNA_B3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:57:31"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9879
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.47484e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.933324
Ran for 550 frames Cell Events: 6 mean_circ: 0.969053
Ran for 1550 frames Cell Events: 38 mean_circ: 0.941303
Ran for 2550 frames Cell Events: 73 mean_circ: 0.933677
Ran for 3050 frames Cell Events: 85 mean_circ: 0.934255
Ran for 3550 frames Cell Events: 98 mean_circ: 0.935946
Ran for 4550 frames Cell Events: 132 mean_circ: 0.933566
Ran for 5050 frames Cell Events: 146 mean_circ: 0.93521
Ran for 7050 frames Cell Events: 203 mean_circ: 0.938599
Ran for 8550 frames Cell Events: 234 mean_circ: 0.939123
Ran for 9050 frames Cell Events: 255 mean_circ: 0.939877
Ran for 11050 frames Cell Events: 292 mean_circ: 0.941513
Ran for 11550 frames Cell Events: 309 mean_circ: 0.941311
Ran for 12550 frames Cell Events: 339 mean_circ: 0.942165
Ran for 13050 frames Cell Events: 351 mean_circ: 0.942109
Ran for 14550 frames Cell Events: 393 mean_circ: 0.942223
Ran for 15050 frames Cell Events: 415 mean_circ: 0.943079
Ran for 15550 frames Cell Events: 428 mean_circ: 0.942815
Ran for 16050 frames Cell Events: 444 mean_circ: 0.942155
Ran for 16550 frames Cell Events: 457 mean_circ: 0.941534
Ran for 17050 frames Cell Events: 471 mean_circ: 0.941575
Ran for 17550 frames Cell Events: 485 mean_circ: 0.941841
Ran for 18550 frames Cell Events: 516 mean_circ: 0.941291
Ran for 19050 frames Cell Events: 525 mean_circ: 0.941473
Ran for 19550 frames Cell Events: 544 mean_circ: 0.94143
Ran for 20050 frames Cell Events: 552 mean_circ: 0.941283
Ran for 20550 frames Cell Events: 565 mean_circ: 0.941425
Ran for 21050 frames Cell Events: 577 mean_circ: 0.941514
Ran for 21550 frames Cell Events: 589 mean_circ: 0.941224
Ran for 22050 frames Cell Events: 602 mean_circ: 0.941223
Ran for 22550 frames Cell Events: 616 mean_circ: 0.941309
Ran for 23050 frames Cell Events: 633 mean_circ: 0.941391
Ran for 23550 frames Cell Events: 639 mean_circ: 0.941606
Ran for 24050 frames Cell Events: 647 mean_circ: 0.941593
Ran for 25050 frames Cell Events: 681 mean_circ: 0.941562
Ran for 25550 frames Cell Events: 691 mean_circ: 0.941569
Ran for 26050 frames Cell Events: 703 mean_circ: 0.941544
Ran for 26550 frames Cell Events: 719 mean_circ: 0.940967
Ran for 27050 frames Cell Events: 733 mean_circ: 0.941114
Ran for 27550 frames Cell Events: 745 mean_circ: 0.940528
Ran for 28050 frames Cell Events: 759 mean_circ: 0.939448
Ran for 28550 frames Cell Events: 771 mean_circ: 0.939315
Ran for 29050 frames Cell Events: 789 mean_circ: 0.939142
Ran for 30050 frames Cell Events: 813 mean_circ: 0.939319
Ran for 31050 frames Cell Events: 824 mean_circ: 0.939493
Ran for 31550 frames Cell Events: 836 mean_circ: 0.939671
Ran for 32050 frames Cell Events: 845 mean_circ: 0.939703
Ran for 32550 frames Cell Events: 854 mean_circ: 0.939786
Ran for 33050 frames Cell Events: 869 mean_circ: 0.940113
Ran for 33550 frames Cell Events: 886 mean_circ: 0.940008
Ran for 34050 frames Cell Events: 903 mean_circ: 0.940005
Ran for 36050 frames Cell Events: 977 mean_circ: 0.940254
Ran for 36550 frames Cell Events: 999 mean_circ: 0.93965
Ran for 37050 frames Cell Events: 1014 mean_circ: 0.939644
Ran for 38050 frames Cell Events: 1039 mean_circ: 0.939708
Ran for 38550 frames Cell Events: 1048 mean_circ: 0.93969
Ran for 39050 frames Cell Events: 1060 mean_circ: 0.939812
Ran for 39550 frames Cell Events: 1073 mean_circ: 0.93983
Ran for 40050 frames Cell Events: 1093 mean_circ: 0.939911
Ran for 41550 frames Cell Events: 1141 mean_circ: 0.939742
Ran for 42550 frames Cell Events: 1171 mean_circ: 0.939431
Ran for 44050 frames Cell Events: 1206 mean_circ: 0.939374
Ran for 44550 frames Cell Events: 1216 mean_circ: 0.939205
Ran for 45550 frames Cell Events: 1250 mean_circ: 0.939392
Ran for 46050 frames Cell Events: 1259 mean_circ: 0.939493
Ran for 46550 frames Cell Events: 1271 mean_circ: 0.939704
Ran for 47050 frames Cell Events: 1282 mean_circ: 0.939812
Ran for 48050 frames Cell Events: 1315 mean_circ: 0.939718
Ran for 48550 frames Cell Events: 1324 mean_circ: 0.939803
Ran for 49550 frames Cell Events: 1351 mean_circ: 0.939966
Ran for 50050 frames Cell Events: 1364 mean_circ: 0.939964
Ran for 50550 frames Cell Events: 1373 mean_circ: 0.940183
Ran for 52050 frames Cell Events: 1411 mean_circ: 0.940134
Ran for 52550 frames Cell Events: 1426 mean_circ: 0.940191
Ran for 53050 frames Cell Events: 1452 mean_circ: 0.940213
Ran for 53550 frames Cell Events: 1461 mean_circ: 0.940361
Ran for 54050 frames Cell Events: 1471 mean_circ: 0.94022
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Ran for 55050 frames Cell Events: 1505 mean_circ: 0.940102
Ran for 55550 frames Cell Events: 1525 mean_circ: 0.940049
Ran for 56550 frames Cell Events: 1554 mean_circ: 0.940076
Ran for 57050 frames Cell Events: 1561 mean_circ: 0.940075
Ran for 58050 frames Cell Events: 1597 mean_circ: 0.939556
Ran for 58550 frames Cell Events: 1607 mean_circ: 0.939521
Ran for 59550 frames Cell Events: 1639 mean_circ: 0.939711
Ran for 60050 frames Cell Events: 1661 mean_circ: 0.939781
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Ran for 61050 frames Cell Events: 1693 mean_circ: 0.939543
Ran for 61550 frames Cell Events: 1707 mean_circ: 0.939629
Ran for 62050 frames Cell Events: 1721 mean_circ: 0.939593
Ran for 62550 frames Cell Events: 1735 mean_circ: 0.93963
Ran for 63050 frames Cell Events: 1761 mean_circ: 0.939505
Ran for 63550 frames Cell Events: 1779 mean_circ: 0.939387
Ran for 64050 frames Cell Events: 1794 mean_circ: 0.939484
Ran for 64550 frames Cell Events: 1811 mean_circ: 0.939407
Ran for 65550 frames Cell Events: 1838 mean_circ: 0.939321
Ran for 66050 frames Cell Events: 1874 mean_circ: 0.939298
Ran for 67050 frames Cell Events: 1906 mean_circ: 0.939195
Ran for 67550 frames Cell Events: 1913 mean_circ: 0.939176
Ran for 68550 frames Cell Events: 1938 mean_circ: 0.93927
Ran for 69550 frames Cell Events: 1960 mean_circ: 0.939275
Ran for 70050 frames Cell Events: 1971 mean_circ: 0.939287
Ran for 71050 frames Cell Events: 2002 mean_circ: 0.939328
Ran for 72050 frames Cell Events: 2031 mean_circ: 0.939348
Ran for 73050 frames Cell Events: 2067 mean_circ: 0.939246
Ran for 73550 frames Cell Events: 2085 mean_circ: 0.939265
Ran for 74050 frames Cell Events: 2098 mean_circ: 0.939375
Ran for 74550 frames Cell Events: 2113 mean_circ: 0.939305
Ran for 76050 frames Cell Events: 2162 mean_circ: 0.939184
Ran for 76550 frames Cell Events: 2178 mean_circ: 0.939241
Ran for 77050 frames Cell Events: 2189 mean_circ: 0.939389
Ran for 77550 frames Cell Events: 2203 mean_circ: 0.939372
Ran for 78050 frames Cell Events: 2214 mean_circ: 0.939309
Ran for 78550 frames Cell Events: 2228 mean_circ: 0.939352
Ran for 79550 frames Cell Events: 2258 mean_circ: 0.939502
Ran for 80050 frames Cell Events: 2273 mean_circ: 0.939517
Ran for 80550 frames Cell Events: 2286 mean_circ: 0.939542
Ran for 81550 frames Cell Events: 2321 mean_circ: 0.939457
Ran for 82050 frames Cell Events: 2335 mean_circ: 0.939429
Ran for 82550 frames Cell Events: 2355 mean_circ: 0.939415
Ran for 83050 frames Cell Events: 2363 mean_circ: 0.939476
Ran for 84050 frames Cell Events: 2401 mean_circ: 0.939293
Ran for 85550 frames Cell Events: 2472 mean_circ: 0.939364
Ran for 86050 frames Cell Events: 2481 mean_circ: 0.939317
Ran for 86550 frames Cell Events: 2508 mean_circ: 0.939419
Ran for 87050 frames Cell Events: 2521 mean_circ: 0.939575
Ran for 87550 frames Cell Events: 2534 mean_circ: 0.939607
Ran for 88050 frames Cell Events: 2543 mean_circ: 0.939565
Ran for 88550 frames Cell Events: 2565 mean_circ: 0.93962
Ran for 89550 frames Cell Events: 2604 mean_circ: 0.939683
Ran for 90050 frames Cell Events: 2622 mean_circ: 0.939548
Ran for 91050 frames Cell Events: 2652 mean_circ: 0.939558
Ran for 91550 frames Cell Events: 2667 mean_circ: 0.939672
Ran for 92550 frames Cell Events: 2698 mean_circ: 0.939846
Ran for 93050 frames Cell Events: 2716 mean_circ: 0.939846
Ran for 93550 frames Cell Events: 2728 mean_circ: 0.939769
Ran for 94050 frames Cell Events: 2746 mean_circ: 0.939812
Ran for 94550 frames Cell Events: 2757 mean_circ: 0.939715
Ran for 95050 frames Cell Events: 2770 mean_circ: 0.93977
Ran for 95550 frames Cell Events: 2786 mean_circ: 0.939711
Ran for 96050 frames Cell Events: 2802 mean_circ: 0.939733
Ran for 96550 frames Cell Events: 2819 mean_circ: 0.939648
Ran for 97050 frames Cell Events: 2836 mean_circ: 0.939493
Ran for 97550 frames Cell Events: 2848 mean_circ: 0.939467
Ran for 98550 frames Cell Events: 2876 mean_circ: 0.93942
Ran for 99050 frames Cell Events: 2893 mean_circ: 0.939451
Ran for 99550 frames Cell Events: 2907 mean_circ: 0.939513
Ran for 100050 frames Cell Events: 2919 mean_circ: 0.939556
Ran for 101550 frames Cell Events: 2957 mean_circ: 0.939606
Ran for 102050 frames Cell Events: 2965 mean_circ: 0.939625
Ran for 102550 frames Cell Events: 2977 mean_circ: 0.939641
Ran for 103550 frames Cell Events: 2996 mean_circ: 0.939732
Ran for 104050 frames Cell Events: 3012 mean_circ: 0.939656
Ran for 104550 frames Cell Events: 3031 mean_circ: 0.939663
Ran for 105050 frames Cell Events: 3050 mean_circ: 0.939677
Ran for 105550 frames Cell Events: 3062 mean_circ: 0.939665
Ran for 106050 frames Cell Events: 3075 mean_circ: 0.939685
Ran for 106550 frames Cell Events: 3089 mean_circ: 0.939656
Ran for 107050 frames Cell Events: 3110 mean_circ: 0.93973
Ran for 107550 frames Cell Events: 3123 mean_circ: 0.939764
Ran for 108550 frames Cell Events: 3167 mean_circ: 0.939645
Ran for 109050 frames Cell Events: 3192 mean_circ: 0.939583
Ran for 110050 frames Cell Events: 3217 mean_circ: 0.939506
Ran for 110550 frames Cell Events: 3234 mean_circ: 0.939541
Ran for 112050 frames Cell Events: 3301 mean_circ: 0.939396
Ran for 112550 frames Cell Events: 3309 mean_circ: 0.939421
Ran for 113550 frames Cell Events: 3340 mean_circ: 0.939509
Ran for 114050 frames Cell Events: 3355 mean_circ: 0.939577
Ran for 114550 frames Cell Events: 3365 mean_circ: 0.939576
Ran for 115050 frames Cell Events: 3380 mean_circ: 0.93959
Ran for 115550 frames Cell Events: 3390 mean_circ: 0.939524
Ran for 116050 frames Cell Events: 3406 mean_circ: 0.939513
Ran for 116550 frames Cell Events: 3416 mean_circ: 0.939532
Ran for 117050 frames Cell Events: 3428 mean_circ: 0.939616
Ran for 117550 frames Cell Events: 3443 mean_circ: 0.939551
Ran for 118050 frames Cell Events: 3450 mean_circ: 0.939608
Ran for 119050 frames Cell Events: 3483 mean_circ: 0.939669
Ran for 119550 frames Cell Events: 3500 mean_circ: 0.939688
Ran for 120050 frames Cell Events: 3520 mean_circ: 0.939697
Ran for 120550 frames Cell Events: 3536 mean_circ: 0.939701
Ran for 121050 frames Cell Events: 3553 mean_circ: 0.939604
Ran for 121550 frames Cell Events: 3576 mean_circ: 0.939677
Ran for 122550 frames Cell Events: 3629 mean_circ: 0.939551
Ran for 123050 frames Cell Events: 3636 mean_circ: 0.93951
Ran for 123550 frames Cell Events: 3653 mean_circ: 0.939371
Ran for 124050 frames Cell Events: 3665 mean_circ: 0.939288
Ran for 124550 frames Cell Events: 3686 mean_circ: 0.939193
Ran for 125050 frames Cell Events: 3705 mean_circ: 0.939118
Ran for 125550 frames Cell Events: 3726 mean_circ: 0.939062
Ran for 126050 frames Cell Events: 3745 mean_circ: 0.939131
Ran for 126550 frames Cell Events: 3759 mean_circ: 0.939129
Ran for 127550 frames Cell Events: 3794 mean_circ: 0.939061
Ran for 129050 frames Cell Events: 3841 mean_circ: 0.939102
Ran for 129550 frames Cell Events: 3861 mean_circ: 0.939103
Ran for 130050 frames Cell Events: 3891 mean_circ: 0.939165
Ran for 130550 frames Cell Events: 3911 mean_circ: 0.939217
Ran for 131050 frames Cell Events: 3930 mean_circ: 0.939234
Ran for 131550 frames Cell Events: 3940 mean_circ: 0.939289
Ran for 132050 frames Cell Events: 3955 mean_circ: 0.939307
Ran for 132550 frames Cell Events: 3967 mean_circ: 0.939305
Ran for 133050 frames Cell Events: 3975 mean_circ: 0.939322
Ran for 134050 frames Cell Events: 4029 mean_circ: 0.939201
Ran for 134550 frames Cell Events: 4051 mean_circ: 0.939115
Ran for 135050 frames Cell Events: 4063 mean_circ: 0.93917
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Ran for 138050 frames Cell Events: 4162 mean_circ: 0.939274
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Ran for 140050 frames Cell Events: 4220 mean_circ: 0.939198
Ran for 140550 frames Cell Events: 4232 mean_circ: 0.939179
Ran for 141550 frames Cell Events: 4264 mean_circ: 0.93909
Ran for 142050 frames Cell Events: 4284 mean_circ: 0.939072
Ran for 142550 frames Cell Events: 4305 mean_circ: 0.939072
Ran for 143550 frames Cell Events: 4341 mean_circ: 0.939024
Ran for 144050 frames Cell Events: 4356 mean_circ: 0.939066
Ran for 144550 frames Cell Events: 4366 mean_circ: 0.939116
Ran for 146050 frames Cell Events: 4407 mean_circ: 0.939152
Ran for 146550 frames Cell Events: 4430 mean_circ: 0.939044
Ran for 147550 frames Cell Events: 4470 mean_circ: 0.939065
Ran for 148050 frames Cell Events: 4489 mean_circ: 0.939077
Ran for 149050 frames Cell Events: 4521 mean_circ: 0.939031
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Ran for 151050 frames Cell Events: 4595 mean_circ: 0.939031
Ran for 152050 frames Cell Events: 4626 mean_circ: 0.939056
Ran for 153050 frames Cell Events: 4654 mean_circ: 0.938981
Ran for 153550 frames Cell Events: 4670 mean_circ: 0.938924
Ran for 155050 frames Cell Events: 4722 mean_circ: 0.938928
Ran for 156050 frames Cell Events: 4751 mean_circ: 0.938917
Ran for 157050 frames Cell Events: 4798 mean_circ: 0.938845
Ran for 157550 frames Cell Events: 4815 mean_circ: 0.938857
Ran for 159550 frames Cell Events: 4906 mean_circ: 0.938896
Ran for 160550 frames Cell Events: 4935 mean_circ: 0.93885
Ran for 161050 frames Cell Events: 4950 mean_circ: 0.938867
Ran for 161550 frames Cell Events: 4970 mean_circ: 0.938878
Ran for 162050 frames Cell Events: 4984 mean_circ: 0.938915
Ran for 162550 frames Cell Events: 5004 mean_circ: 0.938923
Ran for 163050 frames Cell Events: 5022 mean_circ: 0.938972
Ran for 164550 frames Cell Events: 5093 mean_circ: 0.938878
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Ran for 166550 frames Cell Events: 5189 mean_circ: 0.938777
Ran for 167050 frames Cell Events: 5204 mean_circ: 0.938786
Ran for 168050 frames Cell Events: 5240 mean_circ: 0.93874
Ran for 168550 frames Cell Events: 5261 mean_circ: 0.938757
Ran for 169550 frames Cell Events: 5307 mean_circ: 0.938769
Ran for 170050 frames Cell Events: 5313 mean_circ: 0.938778
Ran for 170550 frames Cell Events: 5332 mean_circ: 0.938761
Ran for 171050 frames Cell Events: 5337 mean_circ: 0.93878
Ran for 172550 frames Cell Events: 5401 mean_circ: 0.938846
Ran for 173050 frames Cell Events: 5414 mean_circ: 0.938886
Ran for 173550 frames Cell Events: 5436 mean_circ: 0.93885
Ran for 174050 frames Cell Events: 5455 mean_circ: 0.938795
Ran for 174550 frames Cell Events: 5479 mean_circ: 0.938729
Ran for 175550 frames Cell Events: 5517 mean_circ: 0.938706
Ran for 176050 frames Cell Events: 5534 mean_circ: 0.938682
Ran for 178050 frames Cell Events: 5597 mean_circ: 0.938663
Ran for 178550 frames Cell Events: 5608 mean_circ: 0.938676
Ran for 179050 frames Cell Events: 5632 mean_circ: 0.938678
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Ran for 180050 frames Cell Events: 5661 mean_circ: 0.93874
Ran for 181550 frames Cell Events: 5710 mean_circ: 0.93867
Ran for 182050 frames Cell Events: 5738 mean_circ: 0.93868
Ran for 183050 frames Cell Events: 5766 mean_circ: 0.938696
Ran for 184050 frames Cell Events: 5797 mean_circ: 0.938668
Ran for 184550 frames Cell Events: 5816 mean_circ: 0.938697
Ran for 186050 frames Cell Events: 5867 mean_circ: 0.938642
Ran for 187050 frames Cell Events: 5904 mean_circ: 0.93875
Ran for 188050 frames Cell Events: 5930 mean_circ: 0.938723
Ran for 188550 frames Cell Events: 5944 mean_circ: 0.938781
Ran for 190050 frames Cell Events: 5999 mean_circ: 0.938827
Ran for 190550 frames Cell Events: 6016 mean_circ: 0.938823
Ran for 191550 frames Cell Events: 6048 mean_circ: 0.938875
Ran for 192050 frames Cell Events: 6065 mean_circ: 0.938876
Ran for 193050 frames Cell Events: 6114 mean_circ: 0.938883
Ran for 193550 frames Cell Events: 6131 mean_circ: 0.938896
Ran for 194050 frames Cell Events: 6139 mean_circ: 0.938917
Ran for 194550 frames Cell Events: 6151 mean_circ: 0.938946
Ran for 195050 frames Cell Events: 6157 mean_circ: 0.938952
Ran for 195550 frames Cell Events: 6165 mean_circ: 0.938946
Ran for 196050 frames Cell Events: 6178 mean_circ: 0.938949
Ran for 196550 frames Cell Events: 6190 mean_circ: 0.938964
Ran for 200050 frames Cell Events: 6315 mean_circ: 0.939102
Ran for 200550 frames Cell Events: 6336 mean_circ: 0.93911
Ran for 201550 frames Cell Events: 6376 mean_circ: 0.939089
Ran for 203050 frames Cell Events: 6396 mean_circ: 0.939136
Ran for 203550 frames Cell Events: 6411 mean_circ: 0.939155
Ran for 204050 frames Cell Events: 6426 mean_circ: 0.939144
Ran for 204550 frames Cell Events: 6440 mean_circ: 0.939141
Ran for 205050 frames Cell Events: 6461 mean_circ: 0.93917
Ran for 206050 frames Cell Events: 6495 mean_circ: 0.939117
Ran for 206550 frames Cell Events: 6516 mean_circ: 0.939043
Ran for 207050 frames Cell Events: 6535 mean_circ: 0.939025
Ran for 207550 frames Cell Events: 6549 mean_circ: 0.939008
Ran for 208050 frames Cell Events: 6568 mean_circ: 0.938982
Ran for 208550 frames Cell Events: 6588 mean_circ: 0.938981
Ran for 209550 frames Cell Events: 6621 mean_circ: 0.938924
Ran for 210050 frames Cell Events: 6642 mean_circ: 0.938921
Ran for 210550 frames Cell Events: 6657 mean_circ: 0.938908
Ran for 212550 frames Cell Events: 6724 mean_circ: 0.938831
Ran for 213050 frames Cell Events: 6736 mean_circ: 0.938824
Ran for 215050 frames Cell Events: 6813 mean_circ: 0.938919
Ran for 215550 frames Cell Events: 6829 mean_circ: 0.938925
Ran for 217050 frames Cell Events: 6881 mean_circ: 0.938921
Ran for 218550 frames Cell Events: 6949 mean_circ: 0.938832
Ran for 219050 frames Cell Events: 6969 mean_circ: 0.938887
Ran for 219550 frames Cell Events: 6986 mean_circ: 0.938892
Ran for 220050 frames Cell Events: 7002 mean_circ: 0.93896
Ran for 221550 frames Cell Events: 7053 mean_circ: 0.938897
Ran for 222550 frames Cell Events: 7086 mean_circ: 0.938898
Ran for 223050 frames Cell Events: 7106 mean_circ: 0.938917
Ran for 224050 frames Cell Events: 7133 mean_circ: 0.938963
Ran for 224550 frames Cell Events: 7146 mean_circ: 0.938983
Ran for 225550 frames Cell Events: 7184 mean_circ: 0.938983
Ran for 226050 frames Cell Events: 7197 mean_circ: 0.938989
Ran for 226550 frames Cell Events: 7225 mean_circ: 0.938963
Ran for 227050 frames Cell Events: 7247 mean_circ: 0.938978
Ran for 227550 frames Cell Events: 7268 mean_circ: 0.938983
Ran for 229050 frames Cell Events: 7332 mean_circ: 0.939012
Ran for 230050 frames Cell Events: 7365 mean_circ: 0.939042
Ran for 230550 frames Cell Events: 7387 mean_circ: 0.939015
Ran for 231550 frames Cell Events: 7435 mean_circ: 0.938978
Ran for 232550 frames Cell Events: 7465 mean_circ: 0.939001
Ran for 233550 frames Cell Events: 7502 mean_circ: 0.939021
Ran for 234550 frames Cell Events: 7535 mean_circ: 0.939025
Ran for 235050 frames Cell Events: 7558 mean_circ: 0.939033
Ran for 236050 frames Cell Events: 7586 mean_circ: 0.939015
Ran for 236550 frames Cell Events: 7597 mean_circ: 0.938996
Ran for 238550 frames Cell Events: 7668 mean_circ: 0.939058
Ran for 239050 frames Cell Events: 7691 mean_circ: 0.939039
Ran for 240050 frames Cell Events: 7725 mean_circ: 0.939049
Ran for 240550 frames Cell Events: 7740 mean_circ: 0.939054
Ran for 241550 frames Cell Events: 7764 mean_circ: 0.939057
Ran for 242550 frames Cell Events: 7808 mean_circ: 0.939085
Ran for 243550 frames Cell Events: 7844 mean_circ: 0.939082
Ran for 245050 frames Cell Events: 7894 mean_circ: 0.939046
Ran for 246550 frames Cell Events: 7969 mean_circ: 0.939072
Ran for 247050 frames Cell Events: 7981 mean_circ: 0.939091
Ran for 247550 frames Cell Events: 7998 mean_circ: 0.939112
Ran for 248050 frames Cell Events: 8014 mean_circ: 0.939131
Ran for 248550 frames Cell Events: 8027 mean_circ: 0.939144
Ran for 249050 frames Cell Events: 8050 mean_circ: 0.939098
Ran for 249550 frames Cell Events: 8075 mean_circ: 0.939106
Ran for 250050 frames Cell Events: 8091 mean_circ: 0.939091
Ran for 251550 frames Cell Events: 8148 mean_circ: 0.939087
Ran for 252050 frames Cell Events: 8165 mean_circ: 0.939119
Ran for 252550 frames Cell Events: 8183 mean_circ: 0.939132
Ran for 253550 frames Cell Events: 8227 mean_circ: 0.939148
Ran for 254050 frames Cell Events: 8243 mean_circ: 0.939193
End this measurment..
Stopping time: 5.47611e+008
****************************************
Measurement finished
Mean Circularitiy: 0.939234
Mean Area: 627.843
Mean FL-1 intensity: 3807.89
Mean FL-2 intensity: 4574.63
Mean FL-3 intensity: 0
frames processed: 253428
Total Time: 127350ms
Number of Runs (new bg img) 0
Frames collected: 254579
Skipped frames: 32000
Rescued Frames: 1673425
Samples DAQ: 63644732
Samples written: 127289284
Samples per Channel: 63644642
FPS: 1999.04
Samples per second: 499760
Expected samples/s: 500000
Events: 8266
Events per second: 64.9075
jumped back (PMT): 4870
#Frames read, frequency
# 0 frames :348189
# 1 frames :143776
# 2 frames :5034
# 3 frames :1452
# 4 frames :917
# 5 frames :445
# 6 frames :1935
# 7 frames :2134
# 8 frames :1490
# 9 frames :747
# 10 frames :494
# 11 frames :473
# 12 frames :453
# 13 frames :252
# 14 frames :251
# 15 frames :229
# 16 frames :130
# 17 frames :133
# 18 frames :116
# 19 frames :88
# 20 frames :64
# 21 frames :62
# 22 frames :30
# 23 frames :27
# 24 frames :37
# 25 frames :30
# 26 frames :23
# 27 frames :14
# 28 frames :10
# 29 frames :16
# 30 frames :10
# 31 frames :5
# 32 frames :12
# 33 frames :10
# 34 frames :10
# 35 frames :6
# 36 frames :5
# 37 frames :4
# 38 frames :3
# 39 frames :2
# 40 frames :6
# 41 frames :2
# 42 frames :1
# 43 frames :3
# 46 frames :2
# 47 frames :1
# 48 frames :1
# 49 frames :1
# 50 frames :1
# 53 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9879
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0