Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_12.31.11
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "5ea83b36acacc1f2b28b9e44a2e66380",
"name": "M1_20170603_2049_dsRNA_D4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "10:31:35"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.1554
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.68639e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.923055
Ran for 550 frames Cell Events: 14 mean_circ: 0.957585
Ran for 1050 frames Cell Events: 35 mean_circ: 0.933892
Ran for 2050 frames Cell Events: 77 mean_circ: 0.932376
Ran for 2550 frames Cell Events: 86 mean_circ: 0.932848
Ran for 3550 frames Cell Events: 112 mean_circ: 0.931859
Ran for 4050 frames Cell Events: 123 mean_circ: 0.932587
Ran for 4550 frames Cell Events: 140 mean_circ: 0.933953
Ran for 5050 frames Cell Events: 155 mean_circ: 0.934022
Ran for 5550 frames Cell Events: 167 mean_circ: 0.934975
Ran for 6050 frames Cell Events: 184 mean_circ: 0.936114
Ran for 6550 frames Cell Events: 208 mean_circ: 0.93564
Ran for 7050 frames Cell Events: 225 mean_circ: 0.93439
Ran for 7550 frames Cell Events: 240 mean_circ: 0.934695
Ran for 8050 frames Cell Events: 253 mean_circ: 0.933694
Ran for 9050 frames Cell Events: 286 mean_circ: 0.934043
Ran for 9550 frames Cell Events: 311 mean_circ: 0.934411
Ran for 10550 frames Cell Events: 348 mean_circ: 0.93459
Ran for 11050 frames Cell Events: 364 mean_circ: 0.934731
Ran for 11550 frames Cell Events: 379 mean_circ: 0.934829
Ran for 12050 frames Cell Events: 393 mean_circ: 0.934141
Ran for 12550 frames Cell Events: 407 mean_circ: 0.933519
Ran for 13050 frames Cell Events: 419 mean_circ: 0.933672
Ran for 13550 frames Cell Events: 440 mean_circ: 0.934279
Ran for 14050 frames Cell Events: 453 mean_circ: 0.934446
Ran for 14550 frames Cell Events: 476 mean_circ: 0.934638
Ran for 15050 frames Cell Events: 489 mean_circ: 0.934727
Ran for 15550 frames Cell Events: 524 mean_circ: 0.935128
Ran for 17050 frames Cell Events: 587 mean_circ: 0.935077
Ran for 17550 frames Cell Events: 611 mean_circ: 0.93496
Ran for 18050 frames Cell Events: 626 mean_circ: 0.934728
Ran for 18550 frames Cell Events: 651 mean_circ: 0.934817
Ran for 19050 frames Cell Events: 664 mean_circ: 0.935048
Ran for 20050 frames Cell Events: 691 mean_circ: 0.934964
Ran for 20550 frames Cell Events: 703 mean_circ: 0.934932
Ran for 21050 frames Cell Events: 722 mean_circ: 0.935206
Ran for 21550 frames Cell Events: 735 mean_circ: 0.935541
Ran for 22550 frames Cell Events: 782 mean_circ: 0.935358
Ran for 23050 frames Cell Events: 795 mean_circ: 0.935116
Ran for 23550 frames Cell Events: 806 mean_circ: 0.935135
Ran for 24050 frames Cell Events: 821 mean_circ: 0.935231
Ran for 25050 frames Cell Events: 855 mean_circ: 0.935244
Ran for 26050 frames Cell Events: 906 mean_circ: 0.935151
Ran for 27550 frames Cell Events: 972 mean_circ: 0.935638
Ran for 28050 frames Cell Events: 982 mean_circ: 0.935398
Ran for 28550 frames Cell Events: 1000 mean_circ: 0.935523
Ran for 29550 frames Cell Events: 1024 mean_circ: 0.93572
Ran for 30050 frames Cell Events: 1045 mean_circ: 0.935778
Ran for 31050 frames Cell Events: 1075 mean_circ: 0.935576
Ran for 31550 frames Cell Events: 1092 mean_circ: 0.935453
Ran for 32050 frames Cell Events: 1107 mean_circ: 0.9358
Ran for 32550 frames Cell Events: 1124 mean_circ: 0.935904
Ran for 33050 frames Cell Events: 1142 mean_circ: 0.936187
Ran for 34050 frames Cell Events: 1176 mean_circ: 0.936349
Ran for 36050 frames Cell Events: 1245 mean_circ: 0.935585
Ran for 37050 frames Cell Events: 1289 mean_circ: 0.935734
Ran for 37550 frames Cell Events: 1313 mean_circ: 0.935605
Ran for 39050 frames Cell Events: 1371 mean_circ: 0.935727
Ran for 39550 frames Cell Events: 1397 mean_circ: 0.93539
Ran for 40050 frames Cell Events: 1420 mean_circ: 0.935391
Ran for 40550 frames Cell Events: 1428 mean_circ: 0.93549
Ran for 41050 frames Cell Events: 1445 mean_circ: 0.935522
Ran for 42050 frames Cell Events: 1481 mean_circ: 0.935577
Ran for 42550 frames Cell Events: 1494 mean_circ: 0.935628
Ran for 43550 frames Cell Events: 1529 mean_circ: 0.935404
Ran for 44550 frames Cell Events: 1563 mean_circ: 0.935571
Ran for 45050 frames Cell Events: 1582 mean_circ: 0.935566
Ran for 45550 frames Cell Events: 1600 mean_circ: 0.935555
Ran for 47550 frames Cell Events: 1667 mean_circ: 0.935239
Ran for 48550 frames Cell Events: 1700 mean_circ: 0.935484
Ran for 49550 frames Cell Events: 1734 mean_circ: 0.935375
Ran for 51050 frames Cell Events: 1790 mean_circ: 0.935234
Ran for 52050 frames Cell Events: 1830 mean_circ: 0.935017
Ran for 52550 frames Cell Events: 1847 mean_circ: 0.934917
Ran for 53050 frames Cell Events: 1858 mean_circ: 0.934751
Ran for 53550 frames Cell Events: 1873 mean_circ: 0.934719
Ran for 54050 frames Cell Events: 1888 mean_circ: 0.934788
Ran for 54550 frames Cell Events: 1901 mean_circ: 0.934681
Ran for 55050 frames Cell Events: 1917 mean_circ: 0.934781
Ran for 55550 frames Cell Events: 1932 mean_circ: 0.934768
Ran for 56050 frames Cell Events: 1949 mean_circ: 0.934903
Ran for 56550 frames Cell Events: 1973 mean_circ: 0.93494
Ran for 58550 frames Cell Events: 2035 mean_circ: 0.93486
Ran for 59050 frames Cell Events: 2048 mean_circ: 0.934963
Ran for 60050 frames Cell Events: 2078 mean_circ: 0.9351
Ran for 60550 frames Cell Events: 2092 mean_circ: 0.935035
Ran for 61050 frames Cell Events: 2102 mean_circ: 0.93509
Ran for 61550 frames Cell Events: 2115 mean_circ: 0.934997
Ran for 62050 frames Cell Events: 2128 mean_circ: 0.934996
Ran for 62550 frames Cell Events: 2140 mean_circ: 0.935071
Ran for 63050 frames Cell Events: 2156 mean_circ: 0.935228
Ran for 63550 frames Cell Events: 2169 mean_circ: 0.935143
Ran for 65550 frames Cell Events: 2233 mean_circ: 0.935018
Ran for 66050 frames Cell Events: 2244 mean_circ: 0.934964
Ran for 68050 frames Cell Events: 2325 mean_circ: 0.935103
Ran for 68550 frames Cell Events: 2344 mean_circ: 0.935282
Ran for 69050 frames Cell Events: 2358 mean_circ: 0.935278
Ran for 69550 frames Cell Events: 2379 mean_circ: 0.935309
Ran for 70550 frames Cell Events: 2400 mean_circ: 0.935137
Ran for 71050 frames Cell Events: 2412 mean_circ: 0.935216
Ran for 72550 frames Cell Events: 2465 mean_circ: 0.935144
Ran for 73050 frames Cell Events: 2480 mean_circ: 0.935064
Ran for 73550 frames Cell Events: 2499 mean_circ: 0.934955
Ran for 74550 frames Cell Events: 2538 mean_circ: 0.935079
Ran for 77050 frames Cell Events: 2624 mean_circ: 0.935228
Ran for 78550 frames Cell Events: 2673 mean_circ: 0.9352
Ran for 79050 frames Cell Events: 2684 mean_circ: 0.93526
Ran for 79550 frames Cell Events: 2693 mean_circ: 0.935226
Ran for 80550 frames Cell Events: 2724 mean_circ: 0.935238
Ran for 81050 frames Cell Events: 2754 mean_circ: 0.935074
Ran for 82050 frames Cell Events: 2795 mean_circ: 0.93485
Ran for 82550 frames Cell Events: 2816 mean_circ: 0.934645
Ran for 83550 frames Cell Events: 2855 mean_circ: 0.934693
Ran for 84050 frames Cell Events: 2872 mean_circ: 0.934607
Ran for 84550 frames Cell Events: 2885 mean_circ: 0.934584
Ran for 85550 frames Cell Events: 2919 mean_circ: 0.93477
Ran for 86550 frames Cell Events: 2955 mean_circ: 0.934894
Ran for 87050 frames Cell Events: 2976 mean_circ: 0.934831
Ran for 87550 frames Cell Events: 3000 mean_circ: 0.934788
Ran for 89550 frames Cell Events: 3078 mean_circ: 0.934879
Ran for 90050 frames Cell Events: 3094 mean_circ: 0.934926
Ran for 94550 frames Cell Events: 3262 mean_circ: 0.934724
Ran for 95050 frames Cell Events: 3276 mean_circ: 0.934784
Ran for 96550 frames Cell Events: 3329 mean_circ: 0.934911
Ran for 97050 frames Cell Events: 3347 mean_circ: 0.934939
Ran for 98050 frames Cell Events: 3383 mean_circ: 0.934937
Ran for 99050 frames Cell Events: 3416 mean_circ: 0.934928
Ran for 99550 frames Cell Events: 3433 mean_circ: 0.934958
Ran for 100050 frames Cell Events: 3443 mean_circ: 0.934944
Ran for 100550 frames Cell Events: 3465 mean_circ: 0.935019
Ran for 101550 frames Cell Events: 3507 mean_circ: 0.935054
Ran for 102050 frames Cell Events: 3529 mean_circ: 0.934978
Ran for 102550 frames Cell Events: 3542 mean_circ: 0.934976
Ran for 103550 frames Cell Events: 3580 mean_circ: 0.93506
Ran for 104050 frames Cell Events: 3592 mean_circ: 0.935043
Ran for 104550 frames Cell Events: 3607 mean_circ: 0.935061
Ran for 105050 frames Cell Events: 3622 mean_circ: 0.935078
Ran for 105550 frames Cell Events: 3636 mean_circ: 0.935112
Ran for 107550 frames Cell Events: 3719 mean_circ: 0.935229
Ran for 108050 frames Cell Events: 3732 mean_circ: 0.935255
Ran for 108550 frames Cell Events: 3752 mean_circ: 0.935167
Ran for 109050 frames Cell Events: 3768 mean_circ: 0.935166
Ran for 109550 frames Cell Events: 3785 mean_circ: 0.935233
Ran for 110050 frames Cell Events: 3805 mean_circ: 0.935243
Ran for 110550 frames Cell Events: 3819 mean_circ: 0.935303
Ran for 111550 frames Cell Events: 3854 mean_circ: 0.935278
Ran for 112550 frames Cell Events: 3883 mean_circ: 0.935233
Ran for 113050 frames Cell Events: 3894 mean_circ: 0.935154
Ran for 114050 frames Cell Events: 3934 mean_circ: 0.935275
Ran for 115050 frames Cell Events: 3967 mean_circ: 0.935406
Ran for 115550 frames Cell Events: 3986 mean_circ: 0.935431
Ran for 116050 frames Cell Events: 4004 mean_circ: 0.9354
Ran for 116550 frames Cell Events: 4018 mean_circ: 0.935413
Ran for 117550 frames Cell Events: 4046 mean_circ: 0.935398
Ran for 118050 frames Cell Events: 4062 mean_circ: 0.935431
Ran for 118550 frames Cell Events: 4078 mean_circ: 0.935402
Ran for 119050 frames Cell Events: 4089 mean_circ: 0.935329
Ran for 119550 frames Cell Events: 4105 mean_circ: 0.935396
Ran for 120550 frames Cell Events: 4123 mean_circ: 0.935396
Ran for 121050 frames Cell Events: 4139 mean_circ: 0.935444
Ran for 121550 frames Cell Events: 4159 mean_circ: 0.935478
Ran for 122050 frames Cell Events: 4167 mean_circ: 0.935438
Ran for 122550 frames Cell Events: 4188 mean_circ: 0.935383
Ran for 123050 frames Cell Events: 4201 mean_circ: 0.93539
Ran for 124050 frames Cell Events: 4233 mean_circ: 0.935459
Ran for 124550 frames Cell Events: 4246 mean_circ: 0.935484
Ran for 125550 frames Cell Events: 4294 mean_circ: 0.935282
Ran for 126550 frames Cell Events: 4331 mean_circ: 0.935268
Ran for 127050 frames Cell Events: 4341 mean_circ: 0.935293
Ran for 128050 frames Cell Events: 4380 mean_circ: 0.935323
Ran for 129050 frames Cell Events: 4397 mean_circ: 0.935326
Ran for 129550 frames Cell Events: 4414 mean_circ: 0.935371
Ran for 130050 frames Cell Events: 4433 mean_circ: 0.935336
Ran for 131050 frames Cell Events: 4464 mean_circ: 0.935403
Ran for 131550 frames Cell Events: 4482 mean_circ: 0.935415
Ran for 132050 frames Cell Events: 4498 mean_circ: 0.935467
Ran for 132550 frames Cell Events: 4524 mean_circ: 0.935449
Ran for 133050 frames Cell Events: 4542 mean_circ: 0.935401
Ran for 134050 frames Cell Events: 4579 mean_circ: 0.93542
Ran for 135550 frames Cell Events: 4615 mean_circ: 0.935366
Ran for 137050 frames Cell Events: 4678 mean_circ: 0.93544
Ran for 137550 frames Cell Events: 4694 mean_circ: 0.93542
Ran for 138050 frames Cell Events: 4708 mean_circ: 0.935453
Ran for 138550 frames Cell Events: 4727 mean_circ: 0.935477
Ran for 139050 frames Cell Events: 4751 mean_circ: 0.935518
Ran for 139550 frames Cell Events: 4767 mean_circ: 0.935471
Ran for 140550 frames Cell Events: 4801 mean_circ: 0.935433
Ran for 141050 frames Cell Events: 4813 mean_circ: 0.935444
Ran for 141550 frames Cell Events: 4830 mean_circ: 0.935471
Ran for 142050 frames Cell Events: 4850 mean_circ: 0.935429
Ran for 143550 frames Cell Events: 4894 mean_circ: 0.935195
Ran for 144050 frames Cell Events: 4904 mean_circ: 0.935178
Ran for 145050 frames Cell Events: 4944 mean_circ: 0.935201
Ran for 146550 frames Cell Events: 4986 mean_circ: 0.93521
Ran for 147050 frames Cell Events: 5010 mean_circ: 0.935238
Ran for 148550 frames Cell Events: 5078 mean_circ: 0.935323
Ran for 149550 frames Cell Events: 5100 mean_circ: 0.935405
Ran for 150550 frames Cell Events: 5129 mean_circ: 0.935405
Ran for 151050 frames Cell Events: 5149 mean_circ: 0.935373
Ran for 153550 frames Cell Events: 5243 mean_circ: 0.935319
Ran for 154050 frames Cell Events: 5266 mean_circ: 0.93534
Ran for 155550 frames Cell Events: 5320 mean_circ: 0.935349
Ran for 156550 frames Cell Events: 5355 mean_circ: 0.935377
Ran for 157050 frames Cell Events: 5371 mean_circ: 0.935379
Ran for 158050 frames Cell Events: 5415 mean_circ: 0.935336
Ran for 158550 frames Cell Events: 5435 mean_circ: 0.935312
Ran for 159050 frames Cell Events: 5453 mean_circ: 0.93531
Ran for 159550 frames Cell Events: 5466 mean_circ: 0.935282
Ran for 160550 frames Cell Events: 5497 mean_circ: 0.9353
Ran for 161050 frames Cell Events: 5511 mean_circ: 0.935357
Ran for 163050 frames Cell Events: 5598 mean_circ: 0.93529
Ran for 163550 frames Cell Events: 5610 mean_circ: 0.935288
Ran for 164050 frames Cell Events: 5634 mean_circ: 0.935264
Ran for 164550 frames Cell Events: 5645 mean_circ: 0.93524
Ran for 165550 frames Cell Events: 5678 mean_circ: 0.935232
Ran for 166550 frames Cell Events: 5710 mean_circ: 0.935161
Ran for 167050 frames Cell Events: 5733 mean_circ: 0.935195
Ran for 167550 frames Cell Events: 5750 mean_circ: 0.935188
Ran for 168050 frames Cell Events: 5766 mean_circ: 0.935208
Ran for 168550 frames Cell Events: 5782 mean_circ: 0.935166
Ran for 169050 frames Cell Events: 5793 mean_circ: 0.935164
Ran for 170550 frames Cell Events: 5842 mean_circ: 0.935259
Ran for 171050 frames Cell Events: 5864 mean_circ: 0.935274
Ran for 172050 frames Cell Events: 5904 mean_circ: 0.93532
Ran for 172550 frames Cell Events: 5920 mean_circ: 0.935334
Ran for 173050 frames Cell Events: 5940 mean_circ: 0.935384
Ran for 174050 frames Cell Events: 5969 mean_circ: 0.935313
Ran for 174550 frames Cell Events: 5983 mean_circ: 0.935332
Ran for 176050 frames Cell Events: 6067 mean_circ: 0.935329
Ran for 176550 frames Cell Events: 6081 mean_circ: 0.935378
Ran for 177050 frames Cell Events: 6100 mean_circ: 0.935351
Ran for 178050 frames Cell Events: 6135 mean_circ: 0.935423
Ran for 178550 frames Cell Events: 6152 mean_circ: 0.935375
Ran for 180550 frames Cell Events: 6220 mean_circ: 0.93534
Ran for 181050 frames Cell Events: 6235 mean_circ: 0.935347
Ran for 183050 frames Cell Events: 6317 mean_circ: 0.935274
Ran for 184050 frames Cell Events: 6362 mean_circ: 0.935285
Ran for 184550 frames Cell Events: 6375 mean_circ: 0.935245
Ran for 185050 frames Cell Events: 6396 mean_circ: 0.935211
Ran for 185550 frames Cell Events: 6417 mean_circ: 0.935211
Ran for 186050 frames Cell Events: 6434 mean_circ: 0.935215
Ran for 188550 frames Cell Events: 6549 mean_circ: 0.93516
Ran for 189050 frames Cell Events: 6568 mean_circ: 0.93523
Ran for 189550 frames Cell Events: 6574 mean_circ: 0.935209
Ran for 190550 frames Cell Events: 6618 mean_circ: 0.935262
Ran for 191550 frames Cell Events: 6647 mean_circ: 0.935198
Ran for 192050 frames Cell Events: 6670 mean_circ: 0.93515
Ran for 193050 frames Cell Events: 6704 mean_circ: 0.93516
Ran for 194050 frames Cell Events: 6739 mean_circ: 0.935151
Ran for 194550 frames Cell Events: 6751 mean_circ: 0.935179
Ran for 195550 frames Cell Events: 6787 mean_circ: 0.935241
Ran for 196050 frames Cell Events: 6806 mean_circ: 0.935219
Ran for 196550 frames Cell Events: 6817 mean_circ: 0.935262
Ran for 197050 frames Cell Events: 6831 mean_circ: 0.935251
Ran for 197550 frames Cell Events: 6840 mean_circ: 0.935209
Ran for 198050 frames Cell Events: 6865 mean_circ: 0.935203
Ran for 198550 frames Cell Events: 6883 mean_circ: 0.935205
Ran for 199050 frames Cell Events: 6899 mean_circ: 0.935169
Ran for 200050 frames Cell Events: 6942 mean_circ: 0.935102
Ran for 200550 frames Cell Events: 6976 mean_circ: 0.935092
Ran for 201050 frames Cell Events: 6989 mean_circ: 0.935072
Ran for 201550 frames Cell Events: 7006 mean_circ: 0.935072
Ran for 202050 frames Cell Events: 7024 mean_circ: 0.935039
Ran for 203050 frames Cell Events: 7055 mean_circ: 0.935051
Ran for 203550 frames Cell Events: 7064 mean_circ: 0.935055
Ran for 204050 frames Cell Events: 7076 mean_circ: 0.935031
Ran for 204550 frames Cell Events: 7090 mean_circ: 0.935039
Ran for 205550 frames Cell Events: 7124 mean_circ: 0.935023
Ran for 206550 frames Cell Events: 7161 mean_circ: 0.935022
Ran for 207050 frames Cell Events: 7171 mean_circ: 0.935038
Ran for 207550 frames Cell Events: 7186 mean_circ: 0.935054
Ran for 208550 frames Cell Events: 7218 mean_circ: 0.935004
Ran for 209050 frames Cell Events: 7237 mean_circ: 0.935037
Ran for 209550 frames Cell Events: 7256 mean_circ: 0.935041
Ran for 211550 frames Cell Events: 7337 mean_circ: 0.935109
Ran for 212050 frames Cell Events: 7353 mean_circ: 0.935129
Ran for 212550 frames Cell Events: 7371 mean_circ: 0.935148
Ran for 213050 frames Cell Events: 7389 mean_circ: 0.935114
Ran for 214550 frames Cell Events: 7440 mean_circ: 0.935061
Ran for 216050 frames Cell Events: 7509 mean_circ: 0.935104
Ran for 217050 frames Cell Events: 7541 mean_circ: 0.935164
Ran for 218050 frames Cell Events: 7579 mean_circ: 0.935141
Ran for 218550 frames Cell Events: 7604 mean_circ: 0.935178
Ran for 219550 frames Cell Events: 7648 mean_circ: 0.935185
Ran for 220550 frames Cell Events: 7683 mean_circ: 0.935203
Ran for 221550 frames Cell Events: 7734 mean_circ: 0.935151
Ran for 222550 frames Cell Events: 7775 mean_circ: 0.935167
Ran for 223550 frames Cell Events: 7820 mean_circ: 0.935131
Ran for 224050 frames Cell Events: 7836 mean_circ: 0.935132
Ran for 228050 frames Cell Events: 8007 mean_circ: 0.935096
Ran for 228550 frames Cell Events: 8020 mean_circ: 0.93507
Ran for 229550 frames Cell Events: 8051 mean_circ: 0.93505
Ran for 230050 frames Cell Events: 8057 mean_circ: 0.935031
Ran for 230550 frames Cell Events: 8068 mean_circ: 0.935037
Ran for 231050 frames Cell Events: 8097 mean_circ: 0.935047
Ran for 233050 frames Cell Events: 8168 mean_circ: 0.93499
Ran for 233550 frames Cell Events: 8194 mean_circ: 0.934969
Ran for 234050 frames Cell Events: 8224 mean_circ: 0.934988
Ran for 235050 frames Cell Events: 8257 mean_circ: 0.935024
Ran for 236050 frames Cell Events: 8285 mean_circ: 0.935046
Ran for 236550 frames Cell Events: 8302 mean_circ: 0.935013
Ran for 237050 frames Cell Events: 8317 mean_circ: 0.935028
Ran for 237550 frames Cell Events: 8341 mean_circ: 0.935041
Ran for 238050 frames Cell Events: 8369 mean_circ: 0.935004
Ran for 238550 frames Cell Events: 8397 mean_circ: 0.935009
Ran for 239550 frames Cell Events: 8421 mean_circ: 0.934971
Ran for 240050 frames Cell Events: 8442 mean_circ: 0.934943
Ran for 241550 frames Cell Events: 8509 mean_circ: 0.934895
Ran for 242050 frames Cell Events: 8532 mean_circ: 0.93491
Ran for 243050 frames Cell Events: 8578 mean_circ: 0.9349
Ran for 244550 frames Cell Events: 8647 mean_circ: 0.934928
Ran for 247050 frames Cell Events: 8753 mean_circ: 0.935006
Ran for 248550 frames Cell Events: 8817 mean_circ: 0.935003
Ran for 252050 frames Cell Events: 8949 mean_circ: 0.934921
Ran for 253050 frames Cell Events: 8985 mean_circ: 0.934923
Ran for 253550 frames Cell Events: 9002 mean_circ: 0.934925
Ran for 254050 frames Cell Events: 9018 mean_circ: 0.934922
Ran for 254550 frames Cell Events: 9032 mean_circ: 0.934908
Ran for 255550 frames Cell Events: 9076 mean_circ: 0.934965
Ran for 256050 frames Cell Events: 9090 mean_circ: 0.93498
Ran for 256550 frames Cell Events: 9109 mean_circ: 0.934998
Ran for 257050 frames Cell Events: 9127 mean_circ: 0.935014
Ran for 257550 frames Cell Events: 9143 mean_circ: 0.935016
Ran for 258050 frames Cell Events: 9172 mean_circ: 0.935031
Ran for 258550 frames Cell Events: 9190 mean_circ: 0.935038
Ran for 259050 frames Cell Events: 9202 mean_circ: 0.935062
Ran for 260050 frames Cell Events: 9248 mean_circ: 0.935062
Ran for 260550 frames Cell Events: 9275 mean_circ: 0.935139
Ran for 261050 frames Cell Events: 9296 mean_circ: 0.935134
Ran for 262550 frames Cell Events: 9359 mean_circ: 0.935203
Ran for 263050 frames Cell Events: 9378 mean_circ: 0.935172
Ran for 264050 frames Cell Events: 9417 mean_circ: 0.935151
Ran for 264550 frames Cell Events: 9433 mean_circ: 0.935132
Ran for 265050 frames Cell Events: 9445 mean_circ: 0.93515
Ran for 266050 frames Cell Events: 9476 mean_circ: 0.935185
Ran for 267050 frames Cell Events: 9510 mean_circ: 0.935195
Ran for 267550 frames Cell Events: 9536 mean_circ: 0.935216
Ran for 268050 frames Cell Events: 9562 mean_circ: 0.935199
Ran for 270050 frames Cell Events: 9651 mean_circ: 0.935175
Ran for 270550 frames Cell Events: 9660 mean_circ: 0.935193
Ran for 271050 frames Cell Events: 9670 mean_circ: 0.935182
Ran for 271550 frames Cell Events: 9689 mean_circ: 0.935124
Ran for 273050 frames Cell Events: 9737 mean_circ: 0.935167
Ran for 273550 frames Cell Events: 9752 mean_circ: 0.93515
Ran for 274550 frames Cell Events: 9797 mean_circ: 0.935161
Ran for 275050 frames Cell Events: 9806 mean_circ: 0.93518
Ran for 275550 frames Cell Events: 9830 mean_circ: 0.935141
Ran for 276050 frames Cell Events: 9839 mean_circ: 0.935127
Ran for 276550 frames Cell Events: 9852 mean_circ: 0.935099
Ran for 277550 frames Cell Events: 9888 mean_circ: 0.935138
Ran for 278050 frames Cell Events: 9903 mean_circ: 0.93516
Ran for 278550 frames Cell Events: 9924 mean_circ: 0.935134
Ran for 279050 frames Cell Events: 9944 mean_circ: 0.935142
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 1.68653e+009
****************************************
Measurement finished
Mean Circularitiy: 0.935108
Mean Area: 718.222
Mean FL-1 intensity: 3304.87
Mean FL-2 intensity: 3913.38
Mean FL-3 intensity: 0
frames processed: 279867
Total Time: 140319ms
Number of Runs (new bg img) 0
Frames collected: 280493
Skipped frames: 202119
Rescued Frames: 5793233
Samples DAQ: 70126065
Samples written: 140246362
Samples per Channel: 70123181
FPS: 1998.97
Samples per second: 499741
Expected samples/s: 500000
Events: 10001
Events per second: 71.2733
jumped back (PMT): 5065
#Frames read, frequency
# 0 frames :410450
# 1 frames :129575
# 2 frames :5315
# 3 frames :2403
# 4 frames :1151
# 5 frames :814
# 6 frames :1091
# 7 frames :2122
# 8 frames :1400
# 9 frames :995
# 10 frames :1057
# 11 frames :894
# 12 frames :783
# 13 frames :465
# 14 frames :334
# 15 frames :293
# 16 frames :225
# 17 frames :227
# 18 frames :222
# 19 frames :182
# 20 frames :173
# 21 frames :121
# 22 frames :117
# 23 frames :75
# 24 frames :73
# 25 frames :46
# 26 frames :40
# 27 frames :32
# 28 frames :28
# 29 frames :26
# 30 frames :17
# 31 frames :18
# 32 frames :18
# 33 frames :18
# 34 frames :15
# 35 frames :11
# 36 frames :7
# 37 frames :8
# 38 frames :6
# 39 frames :7
# 40 frames :5
# 41 frames :5
# 42 frames :3
# 43 frames :5
# 44 frames :4
# 45 frames :3
# 46 frames :8
# 47 frames :1
# 48 frames :1
# 49 frames :1
# 52 frames :2
# 54 frames :1
# 55 frames :1
# 56 frames :1
# 57 frames :2
# 58 frames :1
# 60 frames :2
# 65 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.1554
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0