Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.37.33
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "5772be0667c414a0d485cb75ba16a735",
"name": "M1_20170530_1545_dsRNA_I7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:37:56"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8620 (max 8621) in '8620'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8451
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.32259e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 10 mean_circ: 0.953951
Ran for 1050 frames Cell Events: 20 mean_circ: 0.95179
Ran for 1550 frames Cell Events: 37 mean_circ: 0.945458
Ran for 2050 frames Cell Events: 49 mean_circ: 0.945085
Ran for 2550 frames Cell Events: 59 mean_circ: 0.943091
Ran for 3050 frames Cell Events: 72 mean_circ: 0.942511
Ran for 4050 frames Cell Events: 85 mean_circ: 0.942569
Ran for 4550 frames Cell Events: 95 mean_circ: 0.942636
Ran for 5050 frames Cell Events: 105 mean_circ: 0.941257
Ran for 5550 frames Cell Events: 116 mean_circ: 0.941488
Ran for 6050 frames Cell Events: 124 mean_circ: 0.942902
Ran for 6550 frames Cell Events: 139 mean_circ: 0.942247
Ran for 7050 frames Cell Events: 152 mean_circ: 0.942892
Ran for 7550 frames Cell Events: 162 mean_circ: 0.943671
Ran for 8050 frames Cell Events: 167 mean_circ: 0.943874
Ran for 9050 frames Cell Events: 188 mean_circ: 0.944828
Ran for 10050 frames Cell Events: 195 mean_circ: 0.944947
Ran for 11050 frames Cell Events: 214 mean_circ: 0.945455
Ran for 11550 frames Cell Events: 232 mean_circ: 0.944603
Ran for 12050 frames Cell Events: 240 mean_circ: 0.944593
Ran for 12550 frames Cell Events: 253 mean_circ: 0.944737
Ran for 13050 frames Cell Events: 262 mean_circ: 0.944058
Ran for 14050 frames Cell Events: 288 mean_circ: 0.944005
Ran for 15050 frames Cell Events: 298 mean_circ: 0.943565
Ran for 15550 frames Cell Events: 314 mean_circ: 0.94258
Ran for 16050 frames Cell Events: 327 mean_circ: 0.942868
Ran for 16550 frames Cell Events: 331 mean_circ: 0.941976
Ran for 17050 frames Cell Events: 343 mean_circ: 0.942106
Ran for 17550 frames Cell Events: 352 mean_circ: 0.941688
Ran for 18550 frames Cell Events: 373 mean_circ: 0.941549
Ran for 19550 frames Cell Events: 397 mean_circ: 0.940257
Ran for 20050 frames Cell Events: 407 mean_circ: 0.940235
Ran for 21550 frames Cell Events: 446 mean_circ: 0.940243
Ran for 22550 frames Cell Events: 469 mean_circ: 0.940801
Ran for 23050 frames Cell Events: 483 mean_circ: 0.940675
Ran for 24050 frames Cell Events: 507 mean_circ: 0.940213
Ran for 24550 frames Cell Events: 515 mean_circ: 0.939998
Ran for 25050 frames Cell Events: 521 mean_circ: 0.940073
Ran for 25550 frames Cell Events: 534 mean_circ: 0.940546
Ran for 26550 frames Cell Events: 562 mean_circ: 0.941465
Ran for 27050 frames Cell Events: 571 mean_circ: 0.941683
Ran for 27550 frames Cell Events: 586 mean_circ: 0.941757
Ran for 28050 frames Cell Events: 595 mean_circ: 0.941769
Ran for 28550 frames Cell Events: 610 mean_circ: 0.94169
Ran for 29050 frames Cell Events: 622 mean_circ: 0.941718
Ran for 29550 frames Cell Events: 634 mean_circ: 0.941423
Ran for 30050 frames Cell Events: 645 mean_circ: 0.941636
Ran for 30550 frames Cell Events: 651 mean_circ: 0.941674
Ran for 31050 frames Cell Events: 661 mean_circ: 0.942024
Ran for 31550 frames Cell Events: 673 mean_circ: 0.942046
Ran for 32050 frames Cell Events: 683 mean_circ: 0.942318
Ran for 32550 frames Cell Events: 689 mean_circ: 0.942356
Ran for 33050 frames Cell Events: 704 mean_circ: 0.942309
Ran for 33550 frames Cell Events: 721 mean_circ: 0.942326
Ran for 34050 frames Cell Events: 735 mean_circ: 0.941966
Ran for 34550 frames Cell Events: 753 mean_circ: 0.94181
Ran for 35050 frames Cell Events: 757 mean_circ: 0.942039
Ran for 35550 frames Cell Events: 767 mean_circ: 0.942246
Ran for 36050 frames Cell Events: 777 mean_circ: 0.942291
Ran for 36550 frames Cell Events: 789 mean_circ: 0.942493
Ran for 37050 frames Cell Events: 802 mean_circ: 0.942541
Ran for 38050 frames Cell Events: 817 mean_circ: 0.942438
Ran for 38550 frames Cell Events: 829 mean_circ: 0.942275
Ran for 39050 frames Cell Events: 842 mean_circ: 0.942424
Ran for 39550 frames Cell Events: 855 mean_circ: 0.942547
Ran for 40050 frames Cell Events: 872 mean_circ: 0.942148
Ran for 40550 frames Cell Events: 891 mean_circ: 0.941848
Ran for 41550 frames Cell Events: 908 mean_circ: 0.941653
Ran for 42550 frames Cell Events: 932 mean_circ: 0.941962
Ran for 43050 frames Cell Events: 944 mean_circ: 0.942101
Ran for 43550 frames Cell Events: 966 mean_circ: 0.942212
Ran for 44550 frames Cell Events: 993 mean_circ: 0.942295
Ran for 45050 frames Cell Events: 1002 mean_circ: 0.942209
Ran for 45550 frames Cell Events: 1014 mean_circ: 0.942259
Ran for 46050 frames Cell Events: 1029 mean_circ: 0.942071
Ran for 46550 frames Cell Events: 1041 mean_circ: 0.942184
Ran for 47050 frames Cell Events: 1050 mean_circ: 0.942158
Ran for 48050 frames Cell Events: 1072 mean_circ: 0.9423
Ran for 48550 frames Cell Events: 1084 mean_circ: 0.942189
Ran for 49550 frames Cell Events: 1110 mean_circ: 0.942511
Ran for 50050 frames Cell Events: 1117 mean_circ: 0.9426
Ran for 50550 frames Cell Events: 1124 mean_circ: 0.942424
Ran for 51550 frames Cell Events: 1144 mean_circ: 0.942375
Ran for 52050 frames Cell Events: 1155 mean_circ: 0.942365
Ran for 53050 frames Cell Events: 1179 mean_circ: 0.942341
Ran for 53550 frames Cell Events: 1193 mean_circ: 0.942424
Ran for 54050 frames Cell Events: 1204 mean_circ: 0.942543
Ran for 55050 frames Cell Events: 1221 mean_circ: 0.942422
Ran for 57050 frames Cell Events: 1271 mean_circ: 0.942613
Ran for 57550 frames Cell Events: 1279 mean_circ: 0.942597
Ran for 58050 frames Cell Events: 1292 mean_circ: 0.942702
Ran for 58550 frames Cell Events: 1306 mean_circ: 0.942753
Ran for 59050 frames Cell Events: 1315 mean_circ: 0.942772
Ran for 59550 frames Cell Events: 1328 mean_circ: 0.942951
Ran for 60050 frames Cell Events: 1342 mean_circ: 0.942933
Ran for 60550 frames Cell Events: 1361 mean_circ: 0.943226
Ran for 61050 frames Cell Events: 1371 mean_circ: 0.943385
Ran for 61550 frames Cell Events: 1380 mean_circ: 0.943211
Ran for 62050 frames Cell Events: 1391 mean_circ: 0.943192
Ran for 62550 frames Cell Events: 1398 mean_circ: 0.943218
Ran for 63050 frames Cell Events: 1413 mean_circ: 0.943137
Ran for 63550 frames Cell Events: 1429 mean_circ: 0.943095
Ran for 64050 frames Cell Events: 1441 mean_circ: 0.943113
Ran for 65050 frames Cell Events: 1466 mean_circ: 0.943274
Ran for 65550 frames Cell Events: 1480 mean_circ: 0.943264
Ran for 66050 frames Cell Events: 1490 mean_circ: 0.943332
Ran for 67050 frames Cell Events: 1518 mean_circ: 0.943244
Ran for 68550 frames Cell Events: 1558 mean_circ: 0.943234
Ran for 69550 frames Cell Events: 1602 mean_circ: 0.943319
Ran for 70050 frames Cell Events: 1624 mean_circ: 0.943462
Ran for 70550 frames Cell Events: 1638 mean_circ: 0.943277
Ran for 71550 frames Cell Events: 1669 mean_circ: 0.943401
Ran for 72550 frames Cell Events: 1696 mean_circ: 0.943414
Ran for 73050 frames Cell Events: 1709 mean_circ: 0.943542
Ran for 73550 frames Cell Events: 1727 mean_circ: 0.943399
Ran for 74050 frames Cell Events: 1738 mean_circ: 0.943329
Ran for 75050 frames Cell Events: 1764 mean_circ: 0.94328
Ran for 75550 frames Cell Events: 1777 mean_circ: 0.943329
Ran for 76550 frames Cell Events: 1796 mean_circ: 0.943342
Ran for 77050 frames Cell Events: 1806 mean_circ: 0.943348
Ran for 77550 frames Cell Events: 1819 mean_circ: 0.943302
Ran for 78050 frames Cell Events: 1835 mean_circ: 0.943296
Ran for 78550 frames Cell Events: 1851 mean_circ: 0.943382
Ran for 79550 frames Cell Events: 1874 mean_circ: 0.943388
Ran for 80050 frames Cell Events: 1883 mean_circ: 0.943356
Ran for 80550 frames Cell Events: 1895 mean_circ: 0.943217
Ran for 81050 frames Cell Events: 1911 mean_circ: 0.94323
Ran for 81550 frames Cell Events: 1925 mean_circ: 0.943371
Ran for 82050 frames Cell Events: 1935 mean_circ: 0.943441
Ran for 82550 frames Cell Events: 1948 mean_circ: 0.943435
Ran for 83050 frames Cell Events: 1959 mean_circ: 0.943433
Ran for 83550 frames Cell Events: 1974 mean_circ: 0.943574
Ran for 84050 frames Cell Events: 1984 mean_circ: 0.943571
Ran for 84550 frames Cell Events: 1996 mean_circ: 0.943608
Ran for 85050 frames Cell Events: 2003 mean_circ: 0.943564
Ran for 85550 frames Cell Events: 2016 mean_circ: 0.943393
Ran for 86550 frames Cell Events: 2051 mean_circ: 0.943087
Ran for 89050 frames Cell Events: 2119 mean_circ: 0.943241
Ran for 89550 frames Cell Events: 2131 mean_circ: 0.943254
Ran for 90050 frames Cell Events: 2144 mean_circ: 0.9433
Ran for 91050 frames Cell Events: 2166 mean_circ: 0.943421
Ran for 91550 frames Cell Events: 2180 mean_circ: 0.943371
Ran for 92050 frames Cell Events: 2190 mean_circ: 0.943359
Ran for 92550 frames Cell Events: 2200 mean_circ: 0.943335
Ran for 93050 frames Cell Events: 2216 mean_circ: 0.943357
Ran for 93550 frames Cell Events: 2231 mean_circ: 0.943231
Ran for 94550 frames Cell Events: 2260 mean_circ: 0.943428
Ran for 95050 frames Cell Events: 2277 mean_circ: 0.943507
Ran for 95550 frames Cell Events: 2294 mean_circ: 0.943356
Ran for 96050 frames Cell Events: 2307 mean_circ: 0.943375
Ran for 96550 frames Cell Events: 2316 mean_circ: 0.943383
Ran for 97050 frames Cell Events: 2325 mean_circ: 0.943382
Ran for 97550 frames Cell Events: 2334 mean_circ: 0.943262
Ran for 98050 frames Cell Events: 2345 mean_circ: 0.943288
Ran for 98550 frames Cell Events: 2360 mean_circ: 0.943218
Ran for 99050 frames Cell Events: 2374 mean_circ: 0.943196
Ran for 99550 frames Cell Events: 2380 mean_circ: 0.943209
Ran for 101050 frames Cell Events: 2415 mean_circ: 0.94307
Ran for 101550 frames Cell Events: 2425 mean_circ: 0.943095
Ran for 102050 frames Cell Events: 2439 mean_circ: 0.943051
Ran for 102550 frames Cell Events: 2450 mean_circ: 0.942997
Ran for 103550 frames Cell Events: 2474 mean_circ: 0.943069
Ran for 104050 frames Cell Events: 2482 mean_circ: 0.943025
Ran for 105050 frames Cell Events: 2508 mean_circ: 0.943109
Ran for 105550 frames Cell Events: 2521 mean_circ: 0.943191
Ran for 106050 frames Cell Events: 2537 mean_circ: 0.943194
Ran for 106550 frames Cell Events: 2547 mean_circ: 0.943269
Ran for 107050 frames Cell Events: 2556 mean_circ: 0.943257
Ran for 108050 frames Cell Events: 2579 mean_circ: 0.943292
Ran for 108550 frames Cell Events: 2590 mean_circ: 0.943243
Ran for 110050 frames Cell Events: 2634 mean_circ: 0.943257
Ran for 111050 frames Cell Events: 2664 mean_circ: 0.943129
Ran for 111550 frames Cell Events: 2672 mean_circ: 0.943162
Ran for 113550 frames Cell Events: 2724 mean_circ: 0.943113
Ran for 114550 frames Cell Events: 2744 mean_circ: 0.943091
Ran for 115050 frames Cell Events: 2763 mean_circ: 0.942998
Ran for 115550 frames Cell Events: 2771 mean_circ: 0.943052
Ran for 116550 frames Cell Events: 2808 mean_circ: 0.943126
Ran for 117050 frames Cell Events: 2817 mean_circ: 0.943162
Ran for 117550 frames Cell Events: 2833 mean_circ: 0.943145
Ran for 118050 frames Cell Events: 2840 mean_circ: 0.94316
Ran for 118550 frames Cell Events: 2853 mean_circ: 0.943201
Ran for 119050 frames Cell Events: 2863 mean_circ: 0.94307
Ran for 120050 frames Cell Events: 2891 mean_circ: 0.943109
Ran for 120550 frames Cell Events: 2904 mean_circ: 0.943157
Ran for 121050 frames Cell Events: 2920 mean_circ: 0.943152
Ran for 121550 frames Cell Events: 2937 mean_circ: 0.943181
Ran for 122050 frames Cell Events: 2948 mean_circ: 0.943061
Ran for 123050 frames Cell Events: 2975 mean_circ: 0.943045
Ran for 123550 frames Cell Events: 2984 mean_circ: 0.94302
Ran for 124050 frames Cell Events: 2991 mean_circ: 0.943074
Ran for 124550 frames Cell Events: 3005 mean_circ: 0.943064
Ran for 125550 frames Cell Events: 3030 mean_circ: 0.943086
Ran for 126050 frames Cell Events: 3050 mean_circ: 0.94301
Ran for 127050 frames Cell Events: 3080 mean_circ: 0.943093
Ran for 127550 frames Cell Events: 3094 mean_circ: 0.943141
Ran for 128550 frames Cell Events: 3120 mean_circ: 0.943272
Ran for 129550 frames Cell Events: 3138 mean_circ: 0.943191
Ran for 130550 frames Cell Events: 3163 mean_circ: 0.943091
Ran for 131050 frames Cell Events: 3171 mean_circ: 0.943067
Ran for 131550 frames Cell Events: 3188 mean_circ: 0.94313
Ran for 132050 frames Cell Events: 3202 mean_circ: 0.943127
Ran for 132550 frames Cell Events: 3218 mean_circ: 0.943073
Ran for 133050 frames Cell Events: 3236 mean_circ: 0.942953
Ran for 133550 frames Cell Events: 3251 mean_circ: 0.943004
Ran for 134050 frames Cell Events: 3264 mean_circ: 0.943025
Ran for 134550 frames Cell Events: 3276 mean_circ: 0.94299
Ran for 135050 frames Cell Events: 3295 mean_circ: 0.942968
Ran for 135550 frames Cell Events: 3307 mean_circ: 0.943029
Ran for 136050 frames Cell Events: 3313 mean_circ: 0.94302
Ran for 136550 frames Cell Events: 3333 mean_circ: 0.943103
Ran for 137050 frames Cell Events: 3349 mean_circ: 0.943149
Ran for 137550 frames Cell Events: 3358 mean_circ: 0.943092
Ran for 138050 frames Cell Events: 3373 mean_circ: 0.943107
Ran for 139050 frames Cell Events: 3404 mean_circ: 0.943144
Ran for 139550 frames Cell Events: 3417 mean_circ: 0.943094
Ran for 140050 frames Cell Events: 3427 mean_circ: 0.943099
Ran for 140550 frames Cell Events: 3438 mean_circ: 0.943159
Ran for 141050 frames Cell Events: 3452 mean_circ: 0.943207
Ran for 141550 frames Cell Events: 3461 mean_circ: 0.943196
Ran for 142050 frames Cell Events: 3476 mean_circ: 0.943138
Ran for 142550 frames Cell Events: 3492 mean_circ: 0.943079
Ran for 143550 frames Cell Events: 3534 mean_circ: 0.943096
Ran for 144050 frames Cell Events: 3552 mean_circ: 0.943137
Ran for 144550 frames Cell Events: 3571 mean_circ: 0.943212
Ran for 145550 frames Cell Events: 3604 mean_circ: 0.943205
Ran for 146050 frames Cell Events: 3611 mean_circ: 0.943223
Ran for 146550 frames Cell Events: 3618 mean_circ: 0.943245
Ran for 147050 frames Cell Events: 3632 mean_circ: 0.943265
Ran for 147550 frames Cell Events: 3640 mean_circ: 0.943239
Ran for 148050 frames Cell Events: 3648 mean_circ: 0.943194
Ran for 148550 frames Cell Events: 3657 mean_circ: 0.943212
Ran for 149050 frames Cell Events: 3667 mean_circ: 0.943214
Ran for 149550 frames Cell Events: 3683 mean_circ: 0.943244
Ran for 150050 frames Cell Events: 3698 mean_circ: 0.943303
Ran for 150550 frames Cell Events: 3707 mean_circ: 0.943306
Ran for 151050 frames Cell Events: 3728 mean_circ: 0.943307
Ran for 151550 frames Cell Events: 3739 mean_circ: 0.943338
Ran for 152050 frames Cell Events: 3765 mean_circ: 0.943341
Ran for 152550 frames Cell Events: 3779 mean_circ: 0.943311
Ran for 153550 frames Cell Events: 3804 mean_circ: 0.943354
Ran for 154050 frames Cell Events: 3813 mean_circ: 0.943363
Ran for 154550 frames Cell Events: 3833 mean_circ: 0.943427
Ran for 155050 frames Cell Events: 3844 mean_circ: 0.943461
Ran for 155550 frames Cell Events: 3858 mean_circ: 0.943483
Ran for 156050 frames Cell Events: 3867 mean_circ: 0.943435
Ran for 156550 frames Cell Events: 3885 mean_circ: 0.943473
Ran for 157050 frames Cell Events: 3894 mean_circ: 0.94349
Ran for 157550 frames Cell Events: 3905 mean_circ: 0.943524
Ran for 159050 frames Cell Events: 3943 mean_circ: 0.943528
Ran for 159550 frames Cell Events: 3954 mean_circ: 0.94355
Ran for 160050 frames Cell Events: 3970 mean_circ: 0.943583
Ran for 160550 frames Cell Events: 3984 mean_circ: 0.943599
Ran for 161050 frames Cell Events: 3997 mean_circ: 0.943549
Ran for 162050 frames Cell Events: 4021 mean_circ: 0.943525
Ran for 162550 frames Cell Events: 4032 mean_circ: 0.943541
Ran for 163550 frames Cell Events: 4065 mean_circ: 0.943573
Ran for 164550 frames Cell Events: 4096 mean_circ: 0.943567
Ran for 165050 frames Cell Events: 4109 mean_circ: 0.943558
Ran for 165550 frames Cell Events: 4119 mean_circ: 0.943579
Ran for 166050 frames Cell Events: 4139 mean_circ: 0.943576
Ran for 166550 frames Cell Events: 4148 mean_circ: 0.943584
Ran for 167550 frames Cell Events: 4167 mean_circ: 0.943535
Ran for 168550 frames Cell Events: 4179 mean_circ: 0.943518
Ran for 169050 frames Cell Events: 4190 mean_circ: 0.943504
Ran for 169550 frames Cell Events: 4198 mean_circ: 0.94354
Ran for 170050 frames Cell Events: 4207 mean_circ: 0.943544
Ran for 170550 frames Cell Events: 4221 mean_circ: 0.943538
Ran for 171050 frames Cell Events: 4235 mean_circ: 0.943594
Ran for 171550 frames Cell Events: 4253 mean_circ: 0.943541
Ran for 172050 frames Cell Events: 4263 mean_circ: 0.943504
Ran for 172550 frames Cell Events: 4276 mean_circ: 0.943457
Ran for 173550 frames Cell Events: 4307 mean_circ: 0.94348
Ran for 174050 frames Cell Events: 4318 mean_circ: 0.943546
Ran for 174550 frames Cell Events: 4336 mean_circ: 0.943589
Ran for 175050 frames Cell Events: 4349 mean_circ: 0.943559
Ran for 175550 frames Cell Events: 4363 mean_circ: 0.943606
Ran for 176050 frames Cell Events: 4376 mean_circ: 0.94362
Ran for 177050 frames Cell Events: 4403 mean_circ: 0.943643
Ran for 178050 frames Cell Events: 4423 mean_circ: 0.943646
Ran for 179050 frames Cell Events: 4455 mean_circ: 0.943576
Ran for 179550 frames Cell Events: 4468 mean_circ: 0.943553
Ran for 180050 frames Cell Events: 4480 mean_circ: 0.943563
Ran for 180550 frames Cell Events: 4496 mean_circ: 0.943477
Ran for 181050 frames Cell Events: 4504 mean_circ: 0.943485
Ran for 181550 frames Cell Events: 4517 mean_circ: 0.943494
Ran for 182550 frames Cell Events: 4545 mean_circ: 0.943596
Ran for 183050 frames Cell Events: 4562 mean_circ: 0.94358
Ran for 184050 frames Cell Events: 4596 mean_circ: 0.94355
Ran for 184550 frames Cell Events: 4609 mean_circ: 0.94358
Ran for 185050 frames Cell Events: 4623 mean_circ: 0.943518
Ran for 186050 frames Cell Events: 4652 mean_circ: 0.943523
Ran for 186550 frames Cell Events: 4661 mean_circ: 0.943508
Ran for 187050 frames Cell Events: 4681 mean_circ: 0.943474
Ran for 187550 frames Cell Events: 4690 mean_circ: 0.943457
Ran for 188050 frames Cell Events: 4697 mean_circ: 0.943463
Ran for 188550 frames Cell Events: 4709 mean_circ: 0.943489
Ran for 189550 frames Cell Events: 4741 mean_circ: 0.943458
Ran for 190050 frames Cell Events: 4754 mean_circ: 0.943489
Ran for 190550 frames Cell Events: 4774 mean_circ: 0.943504
Ran for 191050 frames Cell Events: 4788 mean_circ: 0.943509
Ran for 191550 frames Cell Events: 4797 mean_circ: 0.94353
Ran for 192050 frames Cell Events: 4802 mean_circ: 0.943507
Ran for 192550 frames Cell Events: 4810 mean_circ: 0.943476
Ran for 193050 frames Cell Events: 4834 mean_circ: 0.943464
Ran for 193550 frames Cell Events: 4845 mean_circ: 0.943515
Ran for 194550 frames Cell Events: 4873 mean_circ: 0.943599
Ran for 195550 frames Cell Events: 4905 mean_circ: 0.943604
Ran for 196050 frames Cell Events: 4923 mean_circ: 0.943625
Ran for 196550 frames Cell Events: 4936 mean_circ: 0.943606
Ran for 197050 frames Cell Events: 4942 mean_circ: 0.943623
Ran for 197550 frames Cell Events: 4954 mean_circ: 0.94362
Ran for 198050 frames Cell Events: 4963 mean_circ: 0.943604
Ran for 198550 frames Cell Events: 4968 mean_circ: 0.94359
Ran for 199050 frames Cell Events: 4994 mean_circ: 0.943588
Ran for 199550 frames Cell Events: 5002 mean_circ: 0.943568
Ran for 200050 frames Cell Events: 5024 mean_circ: 0.94353
Ran for 200550 frames Cell Events: 5036 mean_circ: 0.943543
Ran for 201050 frames Cell Events: 5047 mean_circ: 0.943481
Ran for 201550 frames Cell Events: 5060 mean_circ: 0.943474
Ran for 203550 frames Cell Events: 5101 mean_circ: 0.943496
Ran for 204050 frames Cell Events: 5115 mean_circ: 0.943483
Ran for 206050 frames Cell Events: 5165 mean_circ: 0.943433
Ran for 207050 frames Cell Events: 5195 mean_circ: 0.943505
Ran for 208050 frames Cell Events: 5223 mean_circ: 0.943578
Ran for 209550 frames Cell Events: 5269 mean_circ: 0.943587
Ran for 210550 frames Cell Events: 5296 mean_circ: 0.943541
Ran for 211050 frames Cell Events: 5310 mean_circ: 0.943469
Ran for 211550 frames Cell Events: 5317 mean_circ: 0.943465
Ran for 212050 frames Cell Events: 5327 mean_circ: 0.943476
Ran for 213550 frames Cell Events: 5372 mean_circ: 0.943501
Ran for 214050 frames Cell Events: 5386 mean_circ: 0.943547
Ran for 214550 frames Cell Events: 5401 mean_circ: 0.943535
Ran for 215050 frames Cell Events: 5413 mean_circ: 0.943568
Ran for 215550 frames Cell Events: 5431 mean_circ: 0.943572
Ran for 216550 frames Cell Events: 5449 mean_circ: 0.943593
Ran for 217050 frames Cell Events: 5459 mean_circ: 0.943598
Ran for 217550 frames Cell Events: 5477 mean_circ: 0.943555
Ran for 218050 frames Cell Events: 5487 mean_circ: 0.943553
Ran for 218550 frames Cell Events: 5502 mean_circ: 0.943591
Ran for 219050 frames Cell Events: 5520 mean_circ: 0.943605
Ran for 219550 frames Cell Events: 5528 mean_circ: 0.943631
Ran for 220050 frames Cell Events: 5537 mean_circ: 0.943639
Ran for 220550 frames Cell Events: 5554 mean_circ: 0.943645
Ran for 221050 frames Cell Events: 5566 mean_circ: 0.943628
Ran for 221550 frames Cell Events: 5576 mean_circ: 0.943647
Ran for 222050 frames Cell Events: 5601 mean_circ: 0.943623
Ran for 222550 frames Cell Events: 5625 mean_circ: 0.943661
Ran for 223050 frames Cell Events: 5642 mean_circ: 0.943586
Ran for 223550 frames Cell Events: 5651 mean_circ: 0.943608
Ran for 224050 frames Cell Events: 5658 mean_circ: 0.943594
Ran for 224550 frames Cell Events: 5668 mean_circ: 0.943588
Ran for 225050 frames Cell Events: 5680 mean_circ: 0.943609
Ran for 225550 frames Cell Events: 5694 mean_circ: 0.943625
Ran for 226050 frames Cell Events: 5702 mean_circ: 0.943626
Ran for 226550 frames Cell Events: 5722 mean_circ: 0.94365
Ran for 228550 frames Cell Events: 5803 mean_circ: 0.943717
Ran for 229050 frames Cell Events: 5818 mean_circ: 0.943703
Ran for 229550 frames Cell Events: 5829 mean_circ: 0.943686
Ran for 230050 frames Cell Events: 5847 mean_circ: 0.943729
Ran for 230550 frames Cell Events: 5858 mean_circ: 0.943747
Ran for 232050 frames Cell Events: 5902 mean_circ: 0.943719
Ran for 232550 frames Cell Events: 5921 mean_circ: 0.943749
Ran for 234050 frames Cell Events: 5957 mean_circ: 0.943808
Ran for 234550 frames Cell Events: 5982 mean_circ: 0.943838
Ran for 235050 frames Cell Events: 5997 mean_circ: 0.943834
Ran for 235550 frames Cell Events: 6008 mean_circ: 0.943863
Ran for 236050 frames Cell Events: 6015 mean_circ: 0.943835
Ran for 236550 frames Cell Events: 6031 mean_circ: 0.943812
Ran for 237050 frames Cell Events: 6040 mean_circ: 0.94383
Ran for 237550 frames Cell Events: 6061 mean_circ: 0.943841
Ran for 238550 frames Cell Events: 6088 mean_circ: 0.943881
Ran for 240050 frames Cell Events: 6133 mean_circ: 0.943897
Ran for 240550 frames Cell Events: 6146 mean_circ: 0.94387
Ran for 241050 frames Cell Events: 6160 mean_circ: 0.943892
Ran for 241550 frames Cell Events: 6177 mean_circ: 0.943916
Ran for 242050 frames Cell Events: 6192 mean_circ: 0.943864
Ran for 242550 frames Cell Events: 6213 mean_circ: 0.943837
Ran for 243050 frames Cell Events: 6230 mean_circ: 0.943837
Ran for 243550 frames Cell Events: 6237 mean_circ: 0.943851
Ran for 244050 frames Cell Events: 6252 mean_circ: 0.943872
Ran for 244550 frames Cell Events: 6264 mean_circ: 0.943868
Ran for 245050 frames Cell Events: 6284 mean_circ: 0.943857
Ran for 245550 frames Cell Events: 6294 mean_circ: 0.943861
Ran for 246050 frames Cell Events: 6311 mean_circ: 0.943851
Ran for 247050 frames Cell Events: 6335 mean_circ: 0.943819
Ran for 247550 frames Cell Events: 6347 mean_circ: 0.943773
Ran for 248550 frames Cell Events: 6368 mean_circ: 0.943736
Ran for 249050 frames Cell Events: 6379 mean_circ: 0.943702
Ran for 249550 frames Cell Events: 6392 mean_circ: 0.943709
Ran for 250050 frames Cell Events: 6412 mean_circ: 0.94375
Ran for 250550 frames Cell Events: 6429 mean_circ: 0.943791
Ran for 251050 frames Cell Events: 6451 mean_circ: 0.943757
Ran for 251550 frames Cell Events: 6463 mean_circ: 0.943761
Ran for 252050 frames Cell Events: 6470 mean_circ: 0.943766
Ran for 252550 frames Cell Events: 6488 mean_circ: 0.94375
Ran for 253550 frames Cell Events: 6507 mean_circ: 0.94372
Ran for 254550 frames Cell Events: 6535 mean_circ: 0.943659
Ran for 255550 frames Cell Events: 6565 mean_circ: 0.943703
Ran for 256550 frames Cell Events: 6592 mean_circ: 0.943702
Ran for 257050 frames Cell Events: 6611 mean_circ: 0.943712
Ran for 258550 frames Cell Events: 6644 mean_circ: 0.943755
Ran for 259550 frames Cell Events: 6669 mean_circ: 0.943801
Ran for 260550 frames Cell Events: 6695 mean_circ: 0.943781
Ran for 261050 frames Cell Events: 6715 mean_circ: 0.943775
Ran for 261550 frames Cell Events: 6745 mean_circ: 0.943721
Ran for 262050 frames Cell Events: 6751 mean_circ: 0.943723
Ran for 263050 frames Cell Events: 6790 mean_circ: 0.943736
Ran for 263550 frames Cell Events: 6803 mean_circ: 0.943778
Ran for 264050 frames Cell Events: 6817 mean_circ: 0.943739
Ran for 264550 frames Cell Events: 6837 mean_circ: 0.94374
Ran for 265050 frames Cell Events: 6858 mean_circ: 0.943715
Ran for 265550 frames Cell Events: 6866 mean_circ: 0.943689
Ran for 266050 frames Cell Events: 6883 mean_circ: 0.943689
Ran for 266550 frames Cell Events: 6902 mean_circ: 0.943653
Ran for 267550 frames Cell Events: 6937 mean_circ: 0.943624
Ran for 268550 frames Cell Events: 6968 mean_circ: 0.943634
Ran for 269050 frames Cell Events: 6985 mean_circ: 0.943642
Ran for 269550 frames Cell Events: 6994 mean_circ: 0.943661
Ran for 270050 frames Cell Events: 7009 mean_circ: 0.943674
Ran for 270550 frames Cell Events: 7022 mean_circ: 0.94367
Ran for 271550 frames Cell Events: 7043 mean_circ: 0.943661
Ran for 272050 frames Cell Events: 7058 mean_circ: 0.943644
Ran for 272550 frames Cell Events: 7080 mean_circ: 0.943621
Ran for 274550 frames Cell Events: 7157 mean_circ: 0.943556
Ran for 275050 frames Cell Events: 7168 mean_circ: 0.943572
Ran for 276050 frames Cell Events: 7198 mean_circ: 0.943561
Ran for 276550 frames Cell Events: 7212 mean_circ: 0.943577
Ran for 277050 frames Cell Events: 7227 mean_circ: 0.9436
Ran for 277550 frames Cell Events: 7240 mean_circ: 0.943576
Ran for 279050 frames Cell Events: 7281 mean_circ: 0.943606
Ran for 279550 frames Cell Events: 7303 mean_circ: 0.943647
Ran for 280050 frames Cell Events: 7312 mean_circ: 0.943663
Ran for 280550 frames Cell Events: 7330 mean_circ: 0.943652
Ran for 282050 frames Cell Events: 7377 mean_circ: 0.943679
Ran for 282550 frames Cell Events: 7389 mean_circ: 0.94369
Ran for 283050 frames Cell Events: 7406 mean_circ: 0.943693
Ran for 283550 frames Cell Events: 7419 mean_circ: 0.943671
Ran for 284050 frames Cell Events: 7435 mean_circ: 0.943682
Ran for 284550 frames Cell Events: 7447 mean_circ: 0.943704
Ran for 285050 frames Cell Events: 7460 mean_circ: 0.943701
Ran for 285550 frames Cell Events: 7465 mean_circ: 0.943708
Ran for 286550 frames Cell Events: 7504 mean_circ: 0.943727
Ran for 287550 frames Cell Events: 7534 mean_circ: 0.943778
Ran for 288050 frames Cell Events: 7551 mean_circ: 0.943777
Ran for 288550 frames Cell Events: 7559 mean_circ: 0.943785
Ran for 289550 frames Cell Events: 7591 mean_circ: 0.943731
Ran for 290050 frames Cell Events: 7612 mean_circ: 0.943746
Ran for 290550 frames Cell Events: 7633 mean_circ: 0.943702
Ran for 291050 frames Cell Events: 7645 mean_circ: 0.943706
Ran for 291550 frames Cell Events: 7656 mean_circ: 0.943724
Ran for 292050 frames Cell Events: 7674 mean_circ: 0.943746
Ran for 292550 frames Cell Events: 7695 mean_circ: 0.94375
Ran for 293550 frames Cell Events: 7720 mean_circ: 0.943751
Ran for 294050 frames Cell Events: 7733 mean_circ: 0.943755
Ran for 295050 frames Cell Events: 7766 mean_circ: 0.943776
Ran for 295550 frames Cell Events: 7787 mean_circ: 0.943781
Ran for 296050 frames Cell Events: 7802 mean_circ: 0.943779
Ran for 296550 frames Cell Events: 7823 mean_circ: 0.943815
Ran for 297050 frames Cell Events: 7834 mean_circ: 0.943773
Ran for 297550 frames Cell Events: 7845 mean_circ: 0.943792
Ran for 298550 frames Cell Events: 7869 mean_circ: 0.943812
Ran for 299050 frames Cell Events: 7877 mean_circ: 0.943803
Ran for 299550 frames Cell Events: 7885 mean_circ: 0.943799
Ran for 300050 frames Cell Events: 7896 mean_circ: 0.943809
Ran for 300550 frames Cell Events: 7912 mean_circ: 0.943825
Ran for 301050 frames Cell Events: 7925 mean_circ: 0.94378
Ran for 301550 frames Cell Events: 7941 mean_circ: 0.943801
Ran for 302550 frames Cell Events: 7975 mean_circ: 0.943821
Ran for 303550 frames Cell Events: 8004 mean_circ: 0.943809
Ran for 304050 frames Cell Events: 8014 mean_circ: 0.943814
Ran for 304550 frames Cell Events: 8033 mean_circ: 0.94382
Ran for 305050 frames Cell Events: 8045 mean_circ: 0.943827
Ran for 305550 frames Cell Events: 8056 mean_circ: 0.943822
Ran for 306050 frames Cell Events: 8065 mean_circ: 0.943832
Ran for 306550 frames Cell Events: 8075 mean_circ: 0.943855
Ran for 307550 frames Cell Events: 8115 mean_circ: 0.943875
Ran for 308050 frames Cell Events: 8129 mean_circ: 0.943867
Ran for 308550 frames Cell Events: 8144 mean_circ: 0.943846
Ran for 309050 frames Cell Events: 8166 mean_circ: 0.943857
Ran for 311050 frames Cell Events: 8229 mean_circ: 0.943847
Ran for 312050 frames Cell Events: 8264 mean_circ: 0.943892
Ran for 313050 frames Cell Events: 8295 mean_circ: 0.943907
Ran for 314050 frames Cell Events: 8325 mean_circ: 0.94391
Ran for 314550 frames Cell Events: 8341 mean_circ: 0.943904
Ran for 315050 frames Cell Events: 8356 mean_circ: 0.943913
Ran for 316050 frames Cell Events: 8384 mean_circ: 0.943914
Ran for 316550 frames Cell Events: 8400 mean_circ: 0.943902
Ran for 317050 frames Cell Events: 8411 mean_circ: 0.943917
Ran for 317550 frames Cell Events: 8433 mean_circ: 0.943862
Ran for 318050 frames Cell Events: 8442 mean_circ: 0.943889
Ran for 318550 frames Cell Events: 8457 mean_circ: 0.943911
Ran for 319550 frames Cell Events: 8484 mean_circ: 0.943919
Ran for 320550 frames Cell Events: 8498 mean_circ: 0.943949
Ran for 321050 frames Cell Events: 8516 mean_circ: 0.943951
Ran for 321550 frames Cell Events: 8532 mean_circ: 0.943937
Ran for 322050 frames Cell Events: 8551 mean_circ: 0.943932
Ran for 323050 frames Cell Events: 8588 mean_circ: 0.943964
Ran for 324050 frames Cell Events: 8614 mean_circ: 0.943938
End this measurment..
Stopping time: 1.32275e+009
****************************************
Measurement finished
Mean Circularitiy: 0.943938
Mean Area: 574.487
Mean FL-1 intensity: 2624
Mean FL-2 intensity: 3515.52
Mean FL-3 intensity: 0
frames processed: 322226
Total Time: 162247ms
Number of Runs (new bg img) 0
Frames collected: 324347
Skipped frames: 38784
Rescued Frames: 1907500
Samples DAQ: 81087414
Samples written: 162173542
Samples per Channel: 81086771
FPS: 1999.1
Samples per second: 499775
Expected samples/s: 500000
Events: 8621
Events per second: 53.1351
jumped back (PMT): 6225
#Frames read, frequency
# 0 frames :428825
# 1 frames :198587
# 2 frames :6758
# 3 frames :2131
# 4 frames :1106
# 5 frames :446
# 6 frames :2372
# 7 frames :2628
# 8 frames :1729
# 9 frames :1007
# 10 frames :670
# 11 frames :448
# 12 frames :455
# 13 frames :310
# 14 frames :281
# 15 frames :179
# 16 frames :136
# 17 frames :114
# 18 frames :85
# 19 frames :53
# 20 frames :69
# 21 frames :54
# 22 frames :42
# 23 frames :28
# 24 frames :22
# 25 frames :16
# 26 frames :13
# 27 frames :10
# 28 frames :8
# 29 frames :2
# 30 frames :10
# 31 frames :7
# 32 frames :3
# 33 frames :4
# 34 frames :3
# 35 frames :2
# 36 frames :3
# 37 frames :2
# 40 frames :1
# 41 frames :1
# 42 frames :1
# 43 frames :1
# 59 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8451
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0