Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.29.23
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "cb5154938927bf6771394072fc1eecfd",
"name": "M1_20170530_1412_dsRNA_J1_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:29:50"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.5202
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.31696e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 27 mean_circ: 0.943483
Ran for 1550 frames Cell Events: 42 mean_circ: 0.94064
Ran for 2050 frames Cell Events: 55 mean_circ: 0.941216
Ran for 3050 frames Cell Events: 86 mean_circ: 0.942023
Ran for 3550 frames Cell Events: 104 mean_circ: 0.942716
Ran for 4050 frames Cell Events: 118 mean_circ: 0.943205
Ran for 4550 frames Cell Events: 134 mean_circ: 0.945758
Ran for 5550 frames Cell Events: 166 mean_circ: 0.947137
Ran for 6050 frames Cell Events: 180 mean_circ: 0.947477
Ran for 6550 frames Cell Events: 190 mean_circ: 0.946847
Ran for 7050 frames Cell Events: 207 mean_circ: 0.945731
Ran for 8050 frames Cell Events: 241 mean_circ: 0.944259
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Ran for 10050 frames Cell Events: 295 mean_circ: 0.945203
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Ran for 11050 frames Cell Events: 325 mean_circ: 0.945363
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Ran for 13050 frames Cell Events: 379 mean_circ: 0.944039
Ran for 13550 frames Cell Events: 402 mean_circ: 0.943565
Ran for 14550 frames Cell Events: 436 mean_circ: 0.943927
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Ran for 23550 frames Cell Events: 712 mean_circ: 0.943831
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Ran for 33050 frames Cell Events: 1003 mean_circ: 0.941993
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Ran for 39050 frames Cell Events: 1199 mean_circ: 0.941223
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Ran for 62550 frames Cell Events: 1932 mean_circ: 0.940489
Ran for 63050 frames Cell Events: 1945 mean_circ: 0.940569
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Ran for 64550 frames Cell Events: 1989 mean_circ: 0.940761
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Ran for 65550 frames Cell Events: 2029 mean_circ: 0.940987
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Ran for 73550 frames Cell Events: 2288 mean_circ: 0.941353
Ran for 74550 frames Cell Events: 2324 mean_circ: 0.94098
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Ran for 75550 frames Cell Events: 2359 mean_circ: 0.941105
Ran for 76550 frames Cell Events: 2393 mean_circ: 0.941247
Ran for 77050 frames Cell Events: 2418 mean_circ: 0.941268
Ran for 77550 frames Cell Events: 2429 mean_circ: 0.94123
Ran for 78050 frames Cell Events: 2453 mean_circ: 0.941319
Ran for 78550 frames Cell Events: 2465 mean_circ: 0.941321
Ran for 80050 frames Cell Events: 2512 mean_circ: 0.941117
Ran for 81050 frames Cell Events: 2536 mean_circ: 0.94119
Ran for 81550 frames Cell Events: 2552 mean_circ: 0.941218
Ran for 82050 frames Cell Events: 2559 mean_circ: 0.941265
Ran for 82550 frames Cell Events: 2567 mean_circ: 0.941275
Ran for 83050 frames Cell Events: 2583 mean_circ: 0.941246
Ran for 83550 frames Cell Events: 2602 mean_circ: 0.941199
Ran for 84050 frames Cell Events: 2612 mean_circ: 0.941233
Ran for 84550 frames Cell Events: 2634 mean_circ: 0.941159
Ran for 85050 frames Cell Events: 2651 mean_circ: 0.941192
Ran for 86050 frames Cell Events: 2665 mean_circ: 0.941218
Ran for 87050 frames Cell Events: 2702 mean_circ: 0.941215
Ran for 87550 frames Cell Events: 2716 mean_circ: 0.941167
Ran for 88050 frames Cell Events: 2736 mean_circ: 0.941043
Ran for 88550 frames Cell Events: 2757 mean_circ: 0.94106
Ran for 89050 frames Cell Events: 2773 mean_circ: 0.941135
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Ran for 90050 frames Cell Events: 2803 mean_circ: 0.941133
Ran for 90550 frames Cell Events: 2824 mean_circ: 0.940985
Ran for 91050 frames Cell Events: 2836 mean_circ: 0.941018
Ran for 91550 frames Cell Events: 2859 mean_circ: 0.941047
Ran for 92050 frames Cell Events: 2885 mean_circ: 0.940909
Ran for 92550 frames Cell Events: 2901 mean_circ: 0.940893
Ran for 94550 frames Cell Events: 2993 mean_circ: 0.940768
Ran for 95050 frames Cell Events: 3007 mean_circ: 0.940692
Ran for 95550 frames Cell Events: 3021 mean_circ: 0.940751
Ran for 96050 frames Cell Events: 3034 mean_circ: 0.94064
Ran for 96550 frames Cell Events: 3054 mean_circ: 0.940541
Ran for 97050 frames Cell Events: 3074 mean_circ: 0.940474
Ran for 98050 frames Cell Events: 3113 mean_circ: 0.940531
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Ran for 100050 frames Cell Events: 3188 mean_circ: 0.940528
Ran for 101050 frames Cell Events: 3226 mean_circ: 0.940564
Ran for 101550 frames Cell Events: 3239 mean_circ: 0.940439
Ran for 102550 frames Cell Events: 3282 mean_circ: 0.940414
Ran for 103550 frames Cell Events: 3290 mean_circ: 0.94043
Ran for 104050 frames Cell Events: 3300 mean_circ: 0.940425
Ran for 105050 frames Cell Events: 3334 mean_circ: 0.940424
Ran for 106050 frames Cell Events: 3363 mean_circ: 0.940456
Ran for 106550 frames Cell Events: 3376 mean_circ: 0.940554
Ran for 107050 frames Cell Events: 3395 mean_circ: 0.940545
Ran for 107550 frames Cell Events: 3412 mean_circ: 0.940491
Ran for 108550 frames Cell Events: 3446 mean_circ: 0.940398
Ran for 109050 frames Cell Events: 3465 mean_circ: 0.940412
Ran for 109550 frames Cell Events: 3476 mean_circ: 0.940337
Ran for 110050 frames Cell Events: 3494 mean_circ: 0.940285
Ran for 111050 frames Cell Events: 3514 mean_circ: 0.940319
Ran for 111550 frames Cell Events: 3538 mean_circ: 0.940287
Ran for 113550 frames Cell Events: 3609 mean_circ: 0.940221
Ran for 114050 frames Cell Events: 3625 mean_circ: 0.94028
Ran for 115550 frames Cell Events: 3690 mean_circ: 0.940168
Ran for 116050 frames Cell Events: 3708 mean_circ: 0.940121
Ran for 117050 frames Cell Events: 3741 mean_circ: 0.939987
Ran for 117550 frames Cell Events: 3759 mean_circ: 0.940036
Ran for 118050 frames Cell Events: 3774 mean_circ: 0.939957
Ran for 118550 frames Cell Events: 3792 mean_circ: 0.939887
Ran for 120050 frames Cell Events: 3854 mean_circ: 0.939812
Ran for 120550 frames Cell Events: 3874 mean_circ: 0.939749
Ran for 121550 frames Cell Events: 3914 mean_circ: 0.939845
Ran for 122050 frames Cell Events: 3924 mean_circ: 0.939889
Ran for 123050 frames Cell Events: 3979 mean_circ: 0.939929
Ran for 124550 frames Cell Events: 4038 mean_circ: 0.939901
Ran for 125050 frames Cell Events: 4054 mean_circ: 0.939928
Ran for 125550 frames Cell Events: 4068 mean_circ: 0.939905
Ran for 126050 frames Cell Events: 4093 mean_circ: 0.939873
Ran for 126550 frames Cell Events: 4116 mean_circ: 0.939846
Ran for 127550 frames Cell Events: 4142 mean_circ: 0.939782
Ran for 128050 frames Cell Events: 4155 mean_circ: 0.93979
Ran for 128550 frames Cell Events: 4167 mean_circ: 0.939803
Ran for 129050 frames Cell Events: 4180 mean_circ: 0.939784
Ran for 130050 frames Cell Events: 4239 mean_circ: 0.939736
Ran for 130550 frames Cell Events: 4250 mean_circ: 0.93969
Ran for 131550 frames Cell Events: 4285 mean_circ: 0.939707
Ran for 132050 frames Cell Events: 4299 mean_circ: 0.939645
Ran for 132550 frames Cell Events: 4329 mean_circ: 0.93965
Ran for 133050 frames Cell Events: 4344 mean_circ: 0.939712
Ran for 135550 frames Cell Events: 4496 mean_circ: 0.939396
Ran for 136050 frames Cell Events: 4523 mean_circ: 0.939273
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Ran for 138550 frames Cell Events: 4663 mean_circ: 0.939016
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Ran for 143050 frames Cell Events: 4843 mean_circ: 0.938914
Ran for 143550 frames Cell Events: 4859 mean_circ: 0.938872
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Ran for 144550 frames Cell Events: 4903 mean_circ: 0.938953
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Ran for 146550 frames Cell Events: 4972 mean_circ: 0.938918
Ran for 147550 frames Cell Events: 5007 mean_circ: 0.938908
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Ran for 166050 frames Cell Events: 5719 mean_circ: 0.939086
Ran for 166550 frames Cell Events: 5744 mean_circ: 0.939086
Ran for 167550 frames Cell Events: 5794 mean_circ: 0.939025
Ran for 168050 frames Cell Events: 5811 mean_circ: 0.939003
Ran for 171050 frames Cell Events: 5918 mean_circ: 0.938991
Ran for 172050 frames Cell Events: 5956 mean_circ: 0.938937
Ran for 173550 frames Cell Events: 6020 mean_circ: 0.938874
Ran for 174050 frames Cell Events: 6042 mean_circ: 0.93892
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Ran for 177050 frames Cell Events: 6154 mean_circ: 0.938926
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Ran for 182050 frames Cell Events: 6315 mean_circ: 0.939002
Ran for 182550 frames Cell Events: 6331 mean_circ: 0.939029
Ran for 183050 frames Cell Events: 6352 mean_circ: 0.939031
Ran for 183550 frames Cell Events: 6364 mean_circ: 0.939015
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Ran for 185550 frames Cell Events: 6433 mean_circ: 0.938991
Ran for 186050 frames Cell Events: 6451 mean_circ: 0.938989
Ran for 186550 frames Cell Events: 6462 mean_circ: 0.938967
Ran for 187550 frames Cell Events: 6504 mean_circ: 0.938956
Ran for 188050 frames Cell Events: 6513 mean_circ: 0.93896
Ran for 188550 frames Cell Events: 6533 mean_circ: 0.938974
Ran for 189050 frames Cell Events: 6552 mean_circ: 0.938954
Ran for 190050 frames Cell Events: 6592 mean_circ: 0.939008
Ran for 190550 frames Cell Events: 6616 mean_circ: 0.939024
Ran for 191550 frames Cell Events: 6650 mean_circ: 0.93891
Ran for 192050 frames Cell Events: 6671 mean_circ: 0.938909
Ran for 192550 frames Cell Events: 6698 mean_circ: 0.938909
Ran for 193050 frames Cell Events: 6715 mean_circ: 0.938901
Ran for 194050 frames Cell Events: 6769 mean_circ: 0.938926
Ran for 195050 frames Cell Events: 6817 mean_circ: 0.939011
Ran for 195550 frames Cell Events: 6834 mean_circ: 0.939038
Ran for 197050 frames Cell Events: 6893 mean_circ: 0.939063
Ran for 197550 frames Cell Events: 6905 mean_circ: 0.939072
Ran for 198050 frames Cell Events: 6919 mean_circ: 0.939064
Ran for 198550 frames Cell Events: 6936 mean_circ: 0.939106
Ran for 199050 frames Cell Events: 6951 mean_circ: 0.939076
Ran for 200550 frames Cell Events: 7028 mean_circ: 0.939063
Ran for 201050 frames Cell Events: 7049 mean_circ: 0.939046
Ran for 201550 frames Cell Events: 7058 mean_circ: 0.939062
Ran for 202550 frames Cell Events: 7095 mean_circ: 0.939125
Ran for 203550 frames Cell Events: 7136 mean_circ: 0.939175
Ran for 204050 frames Cell Events: 7148 mean_circ: 0.939169
Ran for 204550 frames Cell Events: 7168 mean_circ: 0.939171
Ran for 205050 frames Cell Events: 7179 mean_circ: 0.939175
Ran for 205550 frames Cell Events: 7197 mean_circ: 0.939164
Ran for 206050 frames Cell Events: 7214 mean_circ: 0.939117
Ran for 206550 frames Cell Events: 7229 mean_circ: 0.939065
Ran for 207050 frames Cell Events: 7253 mean_circ: 0.939042
Ran for 207550 frames Cell Events: 7271 mean_circ: 0.939066
Ran for 209550 frames Cell Events: 7384 mean_circ: 0.939043
Ran for 210050 frames Cell Events: 7400 mean_circ: 0.939066
Ran for 210550 frames Cell Events: 7426 mean_circ: 0.939
Ran for 212050 frames Cell Events: 7503 mean_circ: 0.938755
Ran for 212550 frames Cell Events: 7518 mean_circ: 0.938758
Ran for 213050 frames Cell Events: 7545 mean_circ: 0.938756
Ran for 213550 frames Cell Events: 7562 mean_circ: 0.938733
Ran for 214550 frames Cell Events: 7614 mean_circ: 0.938743
Ran for 217050 frames Cell Events: 7734 mean_circ: 0.93875
Ran for 217550 frames Cell Events: 7752 mean_circ: 0.938701
Ran for 218550 frames Cell Events: 7798 mean_circ: 0.938666
Ran for 219050 frames Cell Events: 7813 mean_circ: 0.938662
Ran for 220050 frames Cell Events: 7852 mean_circ: 0.93872
Ran for 220550 frames Cell Events: 7880 mean_circ: 0.938718
Ran for 221050 frames Cell Events: 7903 mean_circ: 0.938717
Ran for 221550 frames Cell Events: 7922 mean_circ: 0.938746
Ran for 222550 frames Cell Events: 7975 mean_circ: 0.938822
Ran for 224550 frames Cell Events: 8062 mean_circ: 0.938852
Ran for 227050 frames Cell Events: 8166 mean_circ: 0.93886
Ran for 227550 frames Cell Events: 8201 mean_circ: 0.938845
Ran for 228050 frames Cell Events: 8219 mean_circ: 0.938824
Ran for 228550 frames Cell Events: 8252 mean_circ: 0.938843
Ran for 229550 frames Cell Events: 8311 mean_circ: 0.938864
Ran for 231550 frames Cell Events: 8401 mean_circ: 0.938911
Ran for 232550 frames Cell Events: 8434 mean_circ: 0.938959
Ran for 233050 frames Cell Events: 8449 mean_circ: 0.938968
Ran for 233550 frames Cell Events: 8469 mean_circ: 0.938974
Ran for 234050 frames Cell Events: 8492 mean_circ: 0.938886
Ran for 235050 frames Cell Events: 8535 mean_circ: 0.938884
Ran for 235550 frames Cell Events: 8555 mean_circ: 0.938866
Ran for 236050 frames Cell Events: 8573 mean_circ: 0.938879
Ran for 237050 frames Cell Events: 8610 mean_circ: 0.938859
Ran for 238050 frames Cell Events: 8654 mean_circ: 0.938914
Ran for 238550 frames Cell Events: 8667 mean_circ: 0.938914
Ran for 239050 frames Cell Events: 8680 mean_circ: 0.938925
Ran for 239550 frames Cell Events: 8694 mean_circ: 0.938951
Ran for 241550 frames Cell Events: 8764 mean_circ: 0.938932
Ran for 242050 frames Cell Events: 8781 mean_circ: 0.938935
Ran for 243050 frames Cell Events: 8835 mean_circ: 0.938946
Ran for 244050 frames Cell Events: 8884 mean_circ: 0.938911
Ran for 244550 frames Cell Events: 8898 mean_circ: 0.938901
Ran for 245050 frames Cell Events: 8911 mean_circ: 0.938899
Ran for 246050 frames Cell Events: 8953 mean_circ: 0.938894
Ran for 246550 frames Cell Events: 8979 mean_circ: 0.9389
Ran for 247050 frames Cell Events: 8999 mean_circ: 0.938893
Ran for 247550 frames Cell Events: 9017 mean_circ: 0.938907
Ran for 249050 frames Cell Events: 9083 mean_circ: 0.938913
Ran for 251050 frames Cell Events: 9153 mean_circ: 0.938915
Ran for 251550 frames Cell Events: 9172 mean_circ: 0.938838
Ran for 252050 frames Cell Events: 9198 mean_circ: 0.938838
Ran for 252550 frames Cell Events: 9215 mean_circ: 0.938847
Ran for 253050 frames Cell Events: 9233 mean_circ: 0.938822
Ran for 253550 frames Cell Events: 9254 mean_circ: 0.938837
Ran for 254050 frames Cell Events: 9270 mean_circ: 0.938827
Ran for 255050 frames Cell Events: 9304 mean_circ: 0.938877
Ran for 255550 frames Cell Events: 9329 mean_circ: 0.938865
Ran for 256050 frames Cell Events: 9358 mean_circ: 0.93886
Ran for 256550 frames Cell Events: 9375 mean_circ: 0.938852
Ran for 257050 frames Cell Events: 9401 mean_circ: 0.938876
Ran for 257550 frames Cell Events: 9427 mean_circ: 0.938836
Ran for 258550 frames Cell Events: 9475 mean_circ: 0.938781
Ran for 259050 frames Cell Events: 9500 mean_circ: 0.938766
Ran for 259550 frames Cell Events: 9525 mean_circ: 0.938708
Ran for 260550 frames Cell Events: 9582 mean_circ: 0.938554
Ran for 261550 frames Cell Events: 9655 mean_circ: 0.938488
Ran for 264550 frames Cell Events: 9843 mean_circ: 0.938248
Ran for 265050 frames Cell Events: 9862 mean_circ: 0.938214
Ran for 265550 frames Cell Events: 9881 mean_circ: 0.938186
Ran for 266050 frames Cell Events: 9909 mean_circ: 0.938192
Ran for 266550 frames Cell Events: 9926 mean_circ: 0.938177
Ran for 267050 frames Cell Events: 9951 mean_circ: 0.938209
Ran for 267550 frames Cell Events: 9971 mean_circ: 0.938227
Ran for 268050 frames Cell Events: 9988 mean_circ: 0.93825
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 1.3171e+009
****************************************
Measurement finished
Mean Circularitiy: 0.938246
Mean Area: 604.709
Mean FL-1 intensity: 2457.72
Mean FL-2 intensity: 3375.73
Mean FL-3 intensity: 0
frames processed: 266430
Total Time: 134345ms
Number of Runs (new bg img) 0
Frames collected: 268483
Skipped frames: 10642
Rescued Frames: 552667
Samples DAQ: 67121877
Samples written: 134242170
Samples per Channel: 67121085
FPS: 1998.46
Samples per second: 499616
Expected samples/s: 500000
Events: 10001
Events per second: 74.4425
jumped back (PMT): 6060
#Frames read, frequency
# 0 frames :377533
# 1 frames :139611
# 2 frames :5572
# 3 frames :1948
# 4 frames :1044
# 5 frames :416
# 6 frames :2465
# 7 frames :2151
# 8 frames :1499
# 9 frames :933
# 10 frames :832
# 11 frames :515
# 12 frames :489
# 13 frames :287
# 14 frames :332
# 15 frames :257
# 16 frames :180
# 17 frames :168
# 18 frames :99
# 19 frames :74
# 20 frames :58
# 21 frames :75
# 22 frames :51
# 23 frames :46
# 24 frames :36
# 25 frames :33
# 26 frames :32
# 27 frames :12
# 28 frames :20
# 29 frames :15
# 30 frames :14
# 31 frames :10
# 32 frames :5
# 33 frames :11
# 34 frames :15
# 35 frames :6
# 36 frames :8
# 37 frames :3
# 38 frames :5
# 39 frames :2
# 41 frames :3
# 42 frames :2
# 43 frames :6
# 44 frames :3
# 46 frames :1
# 47 frames :1
# 48 frames :3
# 49 frames :1
# 50 frames :1
# 52 frames :2
# 53 frames :1
# 57 frames :1
# 58 frames :1
# 62 frames :1
# 64 frames :1
# 66 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.5202
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0