Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.44.49
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "7e7ae30c81f0f46d8b37963fdcae8edb",
"name": "M1_20170530_1717_dsRNA_K4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:45:11"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8030 (max 8031) in '8030'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.0095
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.32809e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 11 mean_circ: 0.940777
Ran for 1050 frames Cell Events: 28 mean_circ: 0.925288
Ran for 2050 frames Cell Events: 50 mean_circ: 0.929639
Ran for 2550 frames Cell Events: 63 mean_circ: 0.927745
Ran for 3050 frames Cell Events: 82 mean_circ: 0.93212
Ran for 3550 frames Cell Events: 89 mean_circ: 0.934398
Ran for 4550 frames Cell Events: 114 mean_circ: 0.936604
Ran for 5050 frames Cell Events: 127 mean_circ: 0.937202
Ran for 5550 frames Cell Events: 140 mean_circ: 0.935025
Ran for 6550 frames Cell Events: 167 mean_circ: 0.934759
Ran for 8550 frames Cell Events: 204 mean_circ: 0.935658
Ran for 9050 frames Cell Events: 225 mean_circ: 0.93623
Ran for 10050 frames Cell Events: 252 mean_circ: 0.937617
Ran for 10550 frames Cell Events: 257 mean_circ: 0.937627
Ran for 11050 frames Cell Events: 271 mean_circ: 0.937556
Ran for 11550 frames Cell Events: 279 mean_circ: 0.935978
Ran for 12050 frames Cell Events: 290 mean_circ: 0.936722
Ran for 13050 frames Cell Events: 310 mean_circ: 0.93731
Ran for 13550 frames Cell Events: 318 mean_circ: 0.93749
Ran for 14050 frames Cell Events: 343 mean_circ: 0.937088
Ran for 14550 frames Cell Events: 355 mean_circ: 0.937078
Ran for 15550 frames Cell Events: 379 mean_circ: 0.936951
Ran for 16550 frames Cell Events: 407 mean_circ: 0.936363
Ran for 17050 frames Cell Events: 416 mean_circ: 0.93583
Ran for 17550 frames Cell Events: 426 mean_circ: 0.935758
Ran for 18050 frames Cell Events: 442 mean_circ: 0.936059
Ran for 19050 frames Cell Events: 469 mean_circ: 0.93643
Ran for 19550 frames Cell Events: 477 mean_circ: 0.93638
Ran for 20050 frames Cell Events: 494 mean_circ: 0.935917
Ran for 20550 frames Cell Events: 509 mean_circ: 0.935909
Ran for 21050 frames Cell Events: 520 mean_circ: 0.935378
Ran for 21550 frames Cell Events: 525 mean_circ: 0.934847
Ran for 22050 frames Cell Events: 547 mean_circ: 0.935115
Ran for 22550 frames Cell Events: 565 mean_circ: 0.934437
Ran for 23550 frames Cell Events: 589 mean_circ: 0.934311
Ran for 24050 frames Cell Events: 603 mean_circ: 0.934287
Ran for 24550 frames Cell Events: 614 mean_circ: 0.934523
Ran for 25050 frames Cell Events: 626 mean_circ: 0.93444
Ran for 25550 frames Cell Events: 645 mean_circ: 0.934592
Ran for 26050 frames Cell Events: 649 mean_circ: 0.934576
Ran for 26550 frames Cell Events: 658 mean_circ: 0.93449
Ran for 27050 frames Cell Events: 671 mean_circ: 0.934281
Ran for 27550 frames Cell Events: 685 mean_circ: 0.934087
Ran for 28550 frames Cell Events: 711 mean_circ: 0.933923
Ran for 29550 frames Cell Events: 747 mean_circ: 0.933012
Ran for 30050 frames Cell Events: 755 mean_circ: 0.932704
Ran for 30550 frames Cell Events: 776 mean_circ: 0.932681
Ran for 31050 frames Cell Events: 786 mean_circ: 0.932778
Ran for 32050 frames Cell Events: 809 mean_circ: 0.932671
Ran for 33550 frames Cell Events: 844 mean_circ: 0.933301
Ran for 34050 frames Cell Events: 859 mean_circ: 0.932977
Ran for 34550 frames Cell Events: 874 mean_circ: 0.933165
Ran for 35050 frames Cell Events: 883 mean_circ: 0.933338
Ran for 35550 frames Cell Events: 894 mean_circ: 0.933096
Ran for 37050 frames Cell Events: 939 mean_circ: 0.933666
Ran for 37550 frames Cell Events: 948 mean_circ: 0.933658
Ran for 38550 frames Cell Events: 980 mean_circ: 0.934024
Ran for 39050 frames Cell Events: 988 mean_circ: 0.934317
Ran for 39550 frames Cell Events: 1002 mean_circ: 0.934053
Ran for 40550 frames Cell Events: 1025 mean_circ: 0.934032
Ran for 41550 frames Cell Events: 1057 mean_circ: 0.934084
Ran for 42550 frames Cell Events: 1076 mean_circ: 0.934418
Ran for 43050 frames Cell Events: 1086 mean_circ: 0.934473
Ran for 43550 frames Cell Events: 1098 mean_circ: 0.934603
Ran for 44050 frames Cell Events: 1116 mean_circ: 0.9347
Ran for 44550 frames Cell Events: 1126 mean_circ: 0.934546
Ran for 45050 frames Cell Events: 1138 mean_circ: 0.934619
Ran for 45550 frames Cell Events: 1149 mean_circ: 0.934573
Ran for 46550 frames Cell Events: 1167 mean_circ: 0.934327
Ran for 47550 frames Cell Events: 1185 mean_circ: 0.934488
Ran for 48050 frames Cell Events: 1203 mean_circ: 0.934556
Ran for 48550 frames Cell Events: 1214 mean_circ: 0.934754
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Ran for 50550 frames Cell Events: 1283 mean_circ: 0.935017
Ran for 51050 frames Cell Events: 1298 mean_circ: 0.93506
Ran for 52550 frames Cell Events: 1332 mean_circ: 0.935162
Ran for 53050 frames Cell Events: 1351 mean_circ: 0.93511
Ran for 53550 frames Cell Events: 1367 mean_circ: 0.934944
Ran for 54550 frames Cell Events: 1397 mean_circ: 0.934936
Ran for 55550 frames Cell Events: 1420 mean_circ: 0.934578
Ran for 56050 frames Cell Events: 1437 mean_circ: 0.934615
Ran for 56550 frames Cell Events: 1455 mean_circ: 0.934551
Ran for 57050 frames Cell Events: 1472 mean_circ: 0.934643
Ran for 57550 frames Cell Events: 1484 mean_circ: 0.934765
Ran for 58050 frames Cell Events: 1496 mean_circ: 0.934932
Ran for 58550 frames Cell Events: 1515 mean_circ: 0.935138
Ran for 61050 frames Cell Events: 1581 mean_circ: 0.934763
Ran for 62550 frames Cell Events: 1627 mean_circ: 0.934975
Ran for 63550 frames Cell Events: 1649 mean_circ: 0.934963
Ran for 64050 frames Cell Events: 1653 mean_circ: 0.934943
Ran for 64550 frames Cell Events: 1661 mean_circ: 0.934928
Ran for 65050 frames Cell Events: 1674 mean_circ: 0.935074
Ran for 65550 frames Cell Events: 1692 mean_circ: 0.934924
Ran for 66550 frames Cell Events: 1713 mean_circ: 0.935057
Ran for 67050 frames Cell Events: 1723 mean_circ: 0.935092
Ran for 67550 frames Cell Events: 1731 mean_circ: 0.935088
Ran for 68550 frames Cell Events: 1754 mean_circ: 0.935154
Ran for 69050 frames Cell Events: 1768 mean_circ: 0.935102
Ran for 70050 frames Cell Events: 1793 mean_circ: 0.935072
Ran for 71050 frames Cell Events: 1815 mean_circ: 0.935094
Ran for 71550 frames Cell Events: 1825 mean_circ: 0.935042
Ran for 72550 frames Cell Events: 1850 mean_circ: 0.93501
Ran for 74050 frames Cell Events: 1893 mean_circ: 0.9352
Ran for 74550 frames Cell Events: 1906 mean_circ: 0.935223
Ran for 75050 frames Cell Events: 1914 mean_circ: 0.935223
Ran for 75550 frames Cell Events: 1926 mean_circ: 0.935293
Ran for 76550 frames Cell Events: 1954 mean_circ: 0.935259
Ran for 77050 frames Cell Events: 1964 mean_circ: 0.935239
Ran for 77550 frames Cell Events: 1975 mean_circ: 0.935341
Ran for 78050 frames Cell Events: 1987 mean_circ: 0.935374
Ran for 78550 frames Cell Events: 1998 mean_circ: 0.935276
Ran for 79050 frames Cell Events: 2012 mean_circ: 0.935268
Ran for 79550 frames Cell Events: 2023 mean_circ: 0.935229
Ran for 80050 frames Cell Events: 2036 mean_circ: 0.935277
Ran for 80550 frames Cell Events: 2049 mean_circ: 0.9353
Ran for 81050 frames Cell Events: 2062 mean_circ: 0.935359
Ran for 82050 frames Cell Events: 2095 mean_circ: 0.935389
Ran for 82550 frames Cell Events: 2110 mean_circ: 0.935488
Ran for 83050 frames Cell Events: 2125 mean_circ: 0.935404
Ran for 83550 frames Cell Events: 2141 mean_circ: 0.935306
Ran for 84050 frames Cell Events: 2152 mean_circ: 0.935431
Ran for 84550 frames Cell Events: 2160 mean_circ: 0.935448
Ran for 85550 frames Cell Events: 2187 mean_circ: 0.935579
Ran for 86050 frames Cell Events: 2192 mean_circ: 0.935632
Ran for 88050 frames Cell Events: 2242 mean_circ: 0.935635
Ran for 88550 frames Cell Events: 2258 mean_circ: 0.935635
Ran for 89050 frames Cell Events: 2270 mean_circ: 0.935612
Ran for 90050 frames Cell Events: 2298 mean_circ: 0.935628
Ran for 91050 frames Cell Events: 2333 mean_circ: 0.935584
Ran for 91550 frames Cell Events: 2345 mean_circ: 0.935561
Ran for 92050 frames Cell Events: 2354 mean_circ: 0.935581
Ran for 92550 frames Cell Events: 2363 mean_circ: 0.9356
Ran for 93050 frames Cell Events: 2370 mean_circ: 0.935518
Ran for 93550 frames Cell Events: 2385 mean_circ: 0.9354
Ran for 94050 frames Cell Events: 2395 mean_circ: 0.935497
Ran for 94550 frames Cell Events: 2410 mean_circ: 0.935515
Ran for 95050 frames Cell Events: 2419 mean_circ: 0.935471
Ran for 95550 frames Cell Events: 2439 mean_circ: 0.935555
Ran for 96050 frames Cell Events: 2459 mean_circ: 0.935463
Ran for 96550 frames Cell Events: 2463 mean_circ: 0.935475
Ran for 97550 frames Cell Events: 2484 mean_circ: 0.935523
Ran for 98050 frames Cell Events: 2494 mean_circ: 0.935593
Ran for 98550 frames Cell Events: 2501 mean_circ: 0.93563
Ran for 99050 frames Cell Events: 2522 mean_circ: 0.935785
Ran for 99550 frames Cell Events: 2530 mean_circ: 0.935836
Ran for 100550 frames Cell Events: 2556 mean_circ: 0.935981
Ran for 101050 frames Cell Events: 2568 mean_circ: 0.936001
Ran for 101550 frames Cell Events: 2575 mean_circ: 0.93599
Ran for 102550 frames Cell Events: 2601 mean_circ: 0.936081
Ran for 103050 frames Cell Events: 2607 mean_circ: 0.936138
Ran for 103550 frames Cell Events: 2621 mean_circ: 0.936199
Ran for 104050 frames Cell Events: 2634 mean_circ: 0.936131
Ran for 104550 frames Cell Events: 2655 mean_circ: 0.93628
Ran for 105050 frames Cell Events: 2667 mean_circ: 0.936301
Ran for 106050 frames Cell Events: 2681 mean_circ: 0.936312
Ran for 106550 frames Cell Events: 2689 mean_circ: 0.936281
Ran for 107050 frames Cell Events: 2706 mean_circ: 0.936148
Ran for 107550 frames Cell Events: 2718 mean_circ: 0.936133
Ran for 109050 frames Cell Events: 2786 mean_circ: 0.935921
Ran for 109550 frames Cell Events: 2812 mean_circ: 0.935874
Ran for 110550 frames Cell Events: 2843 mean_circ: 0.935933
Ran for 111050 frames Cell Events: 2850 mean_circ: 0.93594
Ran for 111550 frames Cell Events: 2868 mean_circ: 0.93588
Ran for 112050 frames Cell Events: 2886 mean_circ: 0.935749
Ran for 112550 frames Cell Events: 2898 mean_circ: 0.935758
Ran for 113050 frames Cell Events: 2916 mean_circ: 0.935815
Ran for 113550 frames Cell Events: 2931 mean_circ: 0.93587
Ran for 114050 frames Cell Events: 2945 mean_circ: 0.935838
Ran for 114550 frames Cell Events: 2953 mean_circ: 0.935844
Ran for 115550 frames Cell Events: 2964 mean_circ: 0.935867
Ran for 116050 frames Cell Events: 2977 mean_circ: 0.935884
Ran for 116550 frames Cell Events: 2984 mean_circ: 0.935909
Ran for 117050 frames Cell Events: 2991 mean_circ: 0.935972
Ran for 117550 frames Cell Events: 3001 mean_circ: 0.93598
Ran for 118550 frames Cell Events: 3021 mean_circ: 0.936067
Ran for 119050 frames Cell Events: 3040 mean_circ: 0.936125
Ran for 119550 frames Cell Events: 3054 mean_circ: 0.936156
Ran for 120050 frames Cell Events: 3070 mean_circ: 0.936219
Ran for 121050 frames Cell Events: 3104 mean_circ: 0.936277
Ran for 122550 frames Cell Events: 3165 mean_circ: 0.93627
Ran for 123050 frames Cell Events: 3173 mean_circ: 0.936215
Ran for 123550 frames Cell Events: 3190 mean_circ: 0.936282
Ran for 124050 frames Cell Events: 3199 mean_circ: 0.936242
Ran for 124550 frames Cell Events: 3211 mean_circ: 0.93627
Ran for 125050 frames Cell Events: 3220 mean_circ: 0.936325
Ran for 125550 frames Cell Events: 3232 mean_circ: 0.936327
Ran for 126050 frames Cell Events: 3243 mean_circ: 0.936291
Ran for 126550 frames Cell Events: 3256 mean_circ: 0.936344
Ran for 127050 frames Cell Events: 3268 mean_circ: 0.936386
Ran for 127550 frames Cell Events: 3280 mean_circ: 0.936393
Ran for 129050 frames Cell Events: 3319 mean_circ: 0.936223
Ran for 130050 frames Cell Events: 3339 mean_circ: 0.936195
Ran for 130550 frames Cell Events: 3349 mean_circ: 0.936219
Ran for 131050 frames Cell Events: 3354 mean_circ: 0.936256
Ran for 131550 frames Cell Events: 3363 mean_circ: 0.936291
Ran for 132050 frames Cell Events: 3377 mean_circ: 0.9363
Ran for 132550 frames Cell Events: 3392 mean_circ: 0.936287
Ran for 133050 frames Cell Events: 3402 mean_circ: 0.93634
Ran for 133550 frames Cell Events: 3416 mean_circ: 0.936336
Ran for 134050 frames Cell Events: 3426 mean_circ: 0.936378
Ran for 134550 frames Cell Events: 3438 mean_circ: 0.936421
Ran for 135050 frames Cell Events: 3452 mean_circ: 0.936429
Ran for 135550 frames Cell Events: 3464 mean_circ: 0.93647
Ran for 136050 frames Cell Events: 3477 mean_circ: 0.936414
Ran for 136550 frames Cell Events: 3499 mean_circ: 0.936424
Ran for 137050 frames Cell Events: 3508 mean_circ: 0.936444
Ran for 137550 frames Cell Events: 3527 mean_circ: 0.936365
Ran for 138050 frames Cell Events: 3541 mean_circ: 0.936259
Ran for 138550 frames Cell Events: 3551 mean_circ: 0.936249
Ran for 139050 frames Cell Events: 3563 mean_circ: 0.93625
Ran for 139550 frames Cell Events: 3575 mean_circ: 0.936298
Ran for 140050 frames Cell Events: 3590 mean_circ: 0.936292
Ran for 140550 frames Cell Events: 3601 mean_circ: 0.936269
Ran for 141050 frames Cell Events: 3609 mean_circ: 0.936312
Ran for 141550 frames Cell Events: 3624 mean_circ: 0.936348
Ran for 142550 frames Cell Events: 3649 mean_circ: 0.93642
Ran for 144050 frames Cell Events: 3701 mean_circ: 0.936224
Ran for 144550 frames Cell Events: 3711 mean_circ: 0.936224
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Ran for 145550 frames Cell Events: 3733 mean_circ: 0.936214
Ran for 146050 frames Cell Events: 3746 mean_circ: 0.936256
Ran for 146550 frames Cell Events: 3759 mean_circ: 0.936318
Ran for 147550 frames Cell Events: 3784 mean_circ: 0.936375
Ran for 148050 frames Cell Events: 3798 mean_circ: 0.936328
Ran for 148550 frames Cell Events: 3807 mean_circ: 0.936358
Ran for 149050 frames Cell Events: 3818 mean_circ: 0.936412
Ran for 149550 frames Cell Events: 3829 mean_circ: 0.936306
Ran for 150050 frames Cell Events: 3837 mean_circ: 0.936299
Ran for 150550 frames Cell Events: 3844 mean_circ: 0.936307
Ran for 151550 frames Cell Events: 3867 mean_circ: 0.936338
Ran for 152050 frames Cell Events: 3881 mean_circ: 0.936396
Ran for 152550 frames Cell Events: 3898 mean_circ: 0.936452
Ran for 153550 frames Cell Events: 3925 mean_circ: 0.936494
Ran for 154050 frames Cell Events: 3939 mean_circ: 0.936465
Ran for 154550 frames Cell Events: 3958 mean_circ: 0.936531
Ran for 155550 frames Cell Events: 3988 mean_circ: 0.936464
Ran for 156050 frames Cell Events: 3994 mean_circ: 0.936456
Ran for 156550 frames Cell Events: 4005 mean_circ: 0.936486
Ran for 157550 frames Cell Events: 4029 mean_circ: 0.93643
Ran for 158050 frames Cell Events: 4040 mean_circ: 0.936412
Ran for 158550 frames Cell Events: 4050 mean_circ: 0.936451
Ran for 159050 frames Cell Events: 4064 mean_circ: 0.936471
Ran for 159550 frames Cell Events: 4072 mean_circ: 0.936494
Ran for 161050 frames Cell Events: 4111 mean_circ: 0.936563
Ran for 162050 frames Cell Events: 4144 mean_circ: 0.936628
Ran for 162550 frames Cell Events: 4154 mean_circ: 0.936672
Ran for 163050 frames Cell Events: 4170 mean_circ: 0.936691
Ran for 164050 frames Cell Events: 4184 mean_circ: 0.936744
Ran for 164550 frames Cell Events: 4195 mean_circ: 0.936751
Ran for 165050 frames Cell Events: 4202 mean_circ: 0.93677
Ran for 165550 frames Cell Events: 4213 mean_circ: 0.936812
Ran for 166550 frames Cell Events: 4239 mean_circ: 0.936809
Ran for 167050 frames Cell Events: 4254 mean_circ: 0.936802
Ran for 167550 frames Cell Events: 4270 mean_circ: 0.936799
Ran for 168050 frames Cell Events: 4280 mean_circ: 0.936784
Ran for 168550 frames Cell Events: 4293 mean_circ: 0.936765
Ran for 169050 frames Cell Events: 4308 mean_circ: 0.936758
Ran for 169550 frames Cell Events: 4330 mean_circ: 0.936767
Ran for 170550 frames Cell Events: 4368 mean_circ: 0.936873
Ran for 171050 frames Cell Events: 4384 mean_circ: 0.936806
Ran for 171550 frames Cell Events: 4392 mean_circ: 0.936821
Ran for 172050 frames Cell Events: 4411 mean_circ: 0.936849
Ran for 172550 frames Cell Events: 4429 mean_circ: 0.936777
Ran for 173050 frames Cell Events: 4449 mean_circ: 0.936733
Ran for 173550 frames Cell Events: 4462 mean_circ: 0.936759
Ran for 174050 frames Cell Events: 4474 mean_circ: 0.936748
Ran for 174550 frames Cell Events: 4486 mean_circ: 0.936749
Ran for 175050 frames Cell Events: 4506 mean_circ: 0.936725
Ran for 175550 frames Cell Events: 4517 mean_circ: 0.936667
Ran for 176050 frames Cell Events: 4526 mean_circ: 0.936659
Ran for 176550 frames Cell Events: 4542 mean_circ: 0.936677
Ran for 177050 frames Cell Events: 4560 mean_circ: 0.936606
Ran for 177550 frames Cell Events: 4578 mean_circ: 0.936552
Ran for 178550 frames Cell Events: 4615 mean_circ: 0.936622
Ran for 179050 frames Cell Events: 4634 mean_circ: 0.936623
Ran for 179550 frames Cell Events: 4648 mean_circ: 0.936628
Ran for 180050 frames Cell Events: 4661 mean_circ: 0.936679
Ran for 180550 frames Cell Events: 4670 mean_circ: 0.936678
Ran for 182550 frames Cell Events: 4724 mean_circ: 0.936688
Ran for 183050 frames Cell Events: 4743 mean_circ: 0.936748
Ran for 184050 frames Cell Events: 4774 mean_circ: 0.936604
Ran for 184550 frames Cell Events: 4787 mean_circ: 0.936591
Ran for 185050 frames Cell Events: 4808 mean_circ: 0.936538
Ran for 186050 frames Cell Events: 4853 mean_circ: 0.936539
Ran for 187050 frames Cell Events: 4874 mean_circ: 0.936535
Ran for 187550 frames Cell Events: 4889 mean_circ: 0.936489
Ran for 188550 frames Cell Events: 4937 mean_circ: 0.936506
Ran for 189050 frames Cell Events: 4956 mean_circ: 0.936477
Ran for 189550 frames Cell Events: 4969 mean_circ: 0.93651
Ran for 190050 frames Cell Events: 4995 mean_circ: 0.93658
Ran for 190550 frames Cell Events: 5004 mean_circ: 0.936582
Ran for 191550 frames Cell Events: 5037 mean_circ: 0.936599
Ran for 192050 frames Cell Events: 5051 mean_circ: 0.936537
Ran for 193050 frames Cell Events: 5082 mean_circ: 0.936571
Ran for 193550 frames Cell Events: 5096 mean_circ: 0.936605
Ran for 194550 frames Cell Events: 5120 mean_circ: 0.936666
Ran for 195550 frames Cell Events: 5136 mean_circ: 0.936701
Ran for 196550 frames Cell Events: 5167 mean_circ: 0.936627
Ran for 197050 frames Cell Events: 5186 mean_circ: 0.936588
Ran for 197550 frames Cell Events: 5200 mean_circ: 0.936521
Ran for 198050 frames Cell Events: 5207 mean_circ: 0.936579
Ran for 198550 frames Cell Events: 5218 mean_circ: 0.936575
Ran for 199050 frames Cell Events: 5233 mean_circ: 0.936575
Ran for 199550 frames Cell Events: 5247 mean_circ: 0.936598
Ran for 200050 frames Cell Events: 5253 mean_circ: 0.936606
Ran for 200550 frames Cell Events: 5270 mean_circ: 0.936629
Ran for 201050 frames Cell Events: 5285 mean_circ: 0.936637
Ran for 201550 frames Cell Events: 5294 mean_circ: 0.936588
Ran for 202050 frames Cell Events: 5309 mean_circ: 0.936581
Ran for 202550 frames Cell Events: 5316 mean_circ: 0.936558
Ran for 203050 frames Cell Events: 5330 mean_circ: 0.936573
Ran for 203550 frames Cell Events: 5343 mean_circ: 0.936567
Ran for 204550 frames Cell Events: 5377 mean_circ: 0.936565
Ran for 205050 frames Cell Events: 5389 mean_circ: 0.936572
Ran for 205550 frames Cell Events: 5415 mean_circ: 0.936532
Ran for 206050 frames Cell Events: 5424 mean_circ: 0.936552
Ran for 207050 frames Cell Events: 5442 mean_circ: 0.936559
Ran for 207550 frames Cell Events: 5453 mean_circ: 0.93657
Ran for 208050 frames Cell Events: 5465 mean_circ: 0.936536
Ran for 208550 frames Cell Events: 5479 mean_circ: 0.936555
Ran for 209050 frames Cell Events: 5488 mean_circ: 0.936525
Ran for 209550 frames Cell Events: 5507 mean_circ: 0.936549
Ran for 210050 frames Cell Events: 5517 mean_circ: 0.936551
Ran for 210550 frames Cell Events: 5529 mean_circ: 0.936577
Ran for 211050 frames Cell Events: 5543 mean_circ: 0.936585
Ran for 211550 frames Cell Events: 5550 mean_circ: 0.936627
Ran for 212550 frames Cell Events: 5583 mean_circ: 0.936634
Ran for 213050 frames Cell Events: 5592 mean_circ: 0.936651
Ran for 213550 frames Cell Events: 5604 mean_circ: 0.936692
Ran for 214050 frames Cell Events: 5611 mean_circ: 0.936704
Ran for 214550 frames Cell Events: 5623 mean_circ: 0.936709
Ran for 215550 frames Cell Events: 5647 mean_circ: 0.936717
Ran for 216050 frames Cell Events: 5660 mean_circ: 0.936762
Ran for 217550 frames Cell Events: 5688 mean_circ: 0.93678
Ran for 218050 frames Cell Events: 5708 mean_circ: 0.936814
Ran for 219050 frames Cell Events: 5744 mean_circ: 0.936851
Ran for 219550 frames Cell Events: 5762 mean_circ: 0.936893
Ran for 220050 frames Cell Events: 5777 mean_circ: 0.936883
Ran for 220550 frames Cell Events: 5796 mean_circ: 0.936864
Ran for 221050 frames Cell Events: 5810 mean_circ: 0.936887
Ran for 221550 frames Cell Events: 5820 mean_circ: 0.936854
Ran for 222050 frames Cell Events: 5838 mean_circ: 0.936844
Ran for 222550 frames Cell Events: 5864 mean_circ: 0.936828
Ran for 223050 frames Cell Events: 5873 mean_circ: 0.936823
Ran for 223550 frames Cell Events: 5884 mean_circ: 0.936831
Ran for 224550 frames Cell Events: 5904 mean_circ: 0.936798
Ran for 225050 frames Cell Events: 5916 mean_circ: 0.936765
Ran for 226050 frames Cell Events: 5946 mean_circ: 0.936751
Ran for 227050 frames Cell Events: 5972 mean_circ: 0.936741
Ran for 227550 frames Cell Events: 5997 mean_circ: 0.936716
Ran for 228050 frames Cell Events: 6013 mean_circ: 0.936726
Ran for 228550 frames Cell Events: 6023 mean_circ: 0.936737
Ran for 230050 frames Cell Events: 6063 mean_circ: 0.936746
Ran for 230550 frames Cell Events: 6071 mean_circ: 0.936785
Ran for 231550 frames Cell Events: 6101 mean_circ: 0.936846
Ran for 232050 frames Cell Events: 6115 mean_circ: 0.936866
Ran for 233550 frames Cell Events: 6168 mean_circ: 0.936904
Ran for 234050 frames Cell Events: 6176 mean_circ: 0.936892
Ran for 235550 frames Cell Events: 6217 mean_circ: 0.93685
Ran for 236050 frames Cell Events: 6232 mean_circ: 0.936831
Ran for 236550 frames Cell Events: 6251 mean_circ: 0.93687
Ran for 237550 frames Cell Events: 6289 mean_circ: 0.93683
Ran for 238050 frames Cell Events: 6312 mean_circ: 0.936775
Ran for 238550 frames Cell Events: 6324 mean_circ: 0.936817
Ran for 239050 frames Cell Events: 6333 mean_circ: 0.936819
Ran for 239550 frames Cell Events: 6346 mean_circ: 0.936805
Ran for 240050 frames Cell Events: 6352 mean_circ: 0.936773
Ran for 240550 frames Cell Events: 6364 mean_circ: 0.936813
Ran for 241050 frames Cell Events: 6381 mean_circ: 0.936775
Ran for 241550 frames Cell Events: 6401 mean_circ: 0.936804
Ran for 242550 frames Cell Events: 6424 mean_circ: 0.936802
Ran for 243550 frames Cell Events: 6452 mean_circ: 0.936844
Ran for 244050 frames Cell Events: 6462 mean_circ: 0.936892
Ran for 245050 frames Cell Events: 6487 mean_circ: 0.936938
Ran for 245550 frames Cell Events: 6508 mean_circ: 0.936886
Ran for 246550 frames Cell Events: 6545 mean_circ: 0.936774
Ran for 248050 frames Cell Events: 6586 mean_circ: 0.936833
Ran for 249050 frames Cell Events: 6612 mean_circ: 0.936832
Ran for 249550 frames Cell Events: 6626 mean_circ: 0.936836
Ran for 250050 frames Cell Events: 6647 mean_circ: 0.936854
Ran for 250550 frames Cell Events: 6668 mean_circ: 0.936878
Ran for 251050 frames Cell Events: 6678 mean_circ: 0.936907
Ran for 251550 frames Cell Events: 6701 mean_circ: 0.936907
Ran for 252050 frames Cell Events: 6716 mean_circ: 0.936887
Ran for 252550 frames Cell Events: 6738 mean_circ: 0.936869
Ran for 253050 frames Cell Events: 6750 mean_circ: 0.936893
Ran for 253550 frames Cell Events: 6762 mean_circ: 0.936898
Ran for 254550 frames Cell Events: 6796 mean_circ: 0.936947
Ran for 255050 frames Cell Events: 6808 mean_circ: 0.936884
Ran for 256050 frames Cell Events: 6843 mean_circ: 0.936876
Ran for 257050 frames Cell Events: 6862 mean_circ: 0.936887
Ran for 257550 frames Cell Events: 6876 mean_circ: 0.936895
Ran for 258050 frames Cell Events: 6888 mean_circ: 0.936909
Ran for 259550 frames Cell Events: 6938 mean_circ: 0.936885
Ran for 260050 frames Cell Events: 6954 mean_circ: 0.936878
Ran for 260550 frames Cell Events: 6962 mean_circ: 0.936853
Ran for 261050 frames Cell Events: 6972 mean_circ: 0.936856
Ran for 261550 frames Cell Events: 6986 mean_circ: 0.936872
Ran for 263550 frames Cell Events: 7038 mean_circ: 0.936853
Ran for 264050 frames Cell Events: 7054 mean_circ: 0.936887
Ran for 264550 frames Cell Events: 7072 mean_circ: 0.936919
Ran for 265050 frames Cell Events: 7084 mean_circ: 0.936962
Ran for 265550 frames Cell Events: 7093 mean_circ: 0.936958
Ran for 266050 frames Cell Events: 7101 mean_circ: 0.936966
Ran for 267050 frames Cell Events: 7127 mean_circ: 0.936972
Ran for 267550 frames Cell Events: 7142 mean_circ: 0.93693
Ran for 268050 frames Cell Events: 7157 mean_circ: 0.936902
Ran for 268550 frames Cell Events: 7167 mean_circ: 0.93689
Ran for 269050 frames Cell Events: 7186 mean_circ: 0.936904
Ran for 269550 frames Cell Events: 7195 mean_circ: 0.93692
Ran for 270550 frames Cell Events: 7217 mean_circ: 0.936927
Ran for 271050 frames Cell Events: 7231 mean_circ: 0.936931
Ran for 272550 frames Cell Events: 7288 mean_circ: 0.936979
Ran for 273550 frames Cell Events: 7306 mean_circ: 0.936905
Ran for 275550 frames Cell Events: 7347 mean_circ: 0.936883
Ran for 276550 frames Cell Events: 7362 mean_circ: 0.936896
Ran for 277050 frames Cell Events: 7381 mean_circ: 0.936824
Ran for 279050 frames Cell Events: 7452 mean_circ: 0.936833
Ran for 280050 frames Cell Events: 7477 mean_circ: 0.936822
Ran for 280550 frames Cell Events: 7491 mean_circ: 0.936774
Ran for 281050 frames Cell Events: 7504 mean_circ: 0.936782
Ran for 283050 frames Cell Events: 7565 mean_circ: 0.936847
Ran for 283550 frames Cell Events: 7576 mean_circ: 0.936842
Ran for 284050 frames Cell Events: 7597 mean_circ: 0.936852
Ran for 285550 frames Cell Events: 7628 mean_circ: 0.936847
Ran for 286050 frames Cell Events: 7637 mean_circ: 0.936828
Ran for 286550 frames Cell Events: 7646 mean_circ: 0.936834
Ran for 287050 frames Cell Events: 7661 mean_circ: 0.936842
Ran for 288550 frames Cell Events: 7704 mean_circ: 0.936867
Ran for 289050 frames Cell Events: 7720 mean_circ: 0.936861
Ran for 289550 frames Cell Events: 7726 mean_circ: 0.936895
Ran for 290550 frames Cell Events: 7752 mean_circ: 0.936939
Ran for 291050 frames Cell Events: 7764 mean_circ: 0.936956
Ran for 291550 frames Cell Events: 7777 mean_circ: 0.936971
Ran for 293050 frames Cell Events: 7814 mean_circ: 0.936974
Ran for 293550 frames Cell Events: 7827 mean_circ: 0.936961
Ran for 294050 frames Cell Events: 7843 mean_circ: 0.936984
Ran for 294550 frames Cell Events: 7853 mean_circ: 0.936967
Ran for 295050 frames Cell Events: 7864 mean_circ: 0.936934
Ran for 296050 frames Cell Events: 7890 mean_circ: 0.936947
Ran for 296550 frames Cell Events: 7902 mean_circ: 0.936935
Ran for 297050 frames Cell Events: 7922 mean_circ: 0.93694
Ran for 297550 frames Cell Events: 7932 mean_circ: 0.936931
Ran for 298050 frames Cell Events: 7949 mean_circ: 0.93692
Ran for 298550 frames Cell Events: 7959 mean_circ: 0.936934
Ran for 299050 frames Cell Events: 7979 mean_circ: 0.936954
Ran for 299550 frames Cell Events: 7997 mean_circ: 0.936942
End this measurment..
Stopping time: 1.32824e+009
****************************************
Measurement finished
Mean Circularitiy: 0.937
Mean Area: 637.626
Mean FL-1 intensity: 2384.45
Mean FL-2 intensity: 3492.91
Mean FL-3 intensity: 0
frames processed: 298884
Total Time: 150347ms
Number of Runs (new bg img) 0
Frames collected: 300487
Skipped frames: 65106
Rescued Frames: 3115024
Samples DAQ: 75121757
Samples written: 150243330
Samples per Channel: 75121665
FPS: 1998.63
Samples per second: 499657
Expected samples/s: 500000
Events: 8031
Events per second: 53.4166
jumped back (PMT): 5260
#Frames read, frequency
# 0 frames :406186
# 1 frames :174897
# 2 frames :6084
# 3 frames :1995
# 4 frames :1196
# 5 frames :516
# 6 frames :1819
# 7 frames :2243
# 8 frames :1616
# 9 frames :907
# 10 frames :621
# 11 frames :442
# 12 frames :453
# 13 frames :371
# 14 frames :329
# 15 frames :241
# 16 frames :191
# 17 frames :138
# 18 frames :130
# 19 frames :102
# 20 frames :71
# 21 frames :68
# 22 frames :56
# 23 frames :46
# 24 frames :51
# 25 frames :25
# 26 frames :22
# 27 frames :11
# 28 frames :14
# 29 frames :17
# 30 frames :14
# 31 frames :13
# 32 frames :16
# 33 frames :9
# 34 frames :7
# 35 frames :4
# 36 frames :5
# 37 frames :2
# 38 frames :1
# 40 frames :1
# 41 frames :2
# 42 frames :1
# 43 frames :1
# 44 frames :1
# 46 frames :2
# 48 frames :1
# 49 frames :2
# 52 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.0095
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0