Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_19.13.06
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "2c4155fac1f1eed3fef4fca1f86a232b",
"name": "M1_20170521_1930_dsRNA_L2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:13:26"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8023 (max 8025) in '8023'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.8802
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.58473e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 3 mean_circ: 0.932579
Ran for 550 frames Cell Events: 5 mean_circ: 0.751097
Ran for 1550 frames Cell Events: 34 mean_circ: 0.922841
Ran for 2050 frames Cell Events: 38 mean_circ: 0.928616
Ran for 2550 frames Cell Events: 46 mean_circ: 0.932793
Ran for 3550 frames Cell Events: 58 mean_circ: 0.935837
Ran for 4050 frames Cell Events: 65 mean_circ: 0.936223
Ran for 4550 frames Cell Events: 77 mean_circ: 0.938751
Ran for 5550 frames Cell Events: 114 mean_circ: 0.942477
Ran for 6050 frames Cell Events: 125 mean_circ: 0.940985
Ran for 6550 frames Cell Events: 135 mean_circ: 0.938322
Ran for 7050 frames Cell Events: 152 mean_circ: 0.938658
Ran for 7550 frames Cell Events: 163 mean_circ: 0.938572
Ran for 8050 frames Cell Events: 179 mean_circ: 0.93809
Ran for 8550 frames Cell Events: 198 mean_circ: 0.934962
Ran for 9050 frames Cell Events: 226 mean_circ: 0.935386
Ran for 9550 frames Cell Events: 244 mean_circ: 0.935488
Ran for 10550 frames Cell Events: 276 mean_circ: 0.936421
Ran for 11050 frames Cell Events: 282 mean_circ: 0.936681
Ran for 11550 frames Cell Events: 290 mean_circ: 0.936746
Ran for 12050 frames Cell Events: 306 mean_circ: 0.937438
Ran for 12550 frames Cell Events: 322 mean_circ: 0.937748
Ran for 13050 frames Cell Events: 347 mean_circ: 0.937955
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Ran for 29550 frames Cell Events: 838 mean_circ: 0.936532
Ran for 30050 frames Cell Events: 845 mean_circ: 0.936569
Ran for 30550 frames Cell Events: 862 mean_circ: 0.936076
Ran for 31050 frames Cell Events: 889 mean_circ: 0.936173
Ran for 31550 frames Cell Events: 895 mean_circ: 0.936292
Ran for 32050 frames Cell Events: 902 mean_circ: 0.93633
Ran for 32550 frames Cell Events: 909 mean_circ: 0.936482
Ran for 33550 frames Cell Events: 926 mean_circ: 0.936515
Ran for 34050 frames Cell Events: 939 mean_circ: 0.936339
Ran for 35050 frames Cell Events: 967 mean_circ: 0.936508
Ran for 35550 frames Cell Events: 973 mean_circ: 0.936631
Ran for 36050 frames Cell Events: 978 mean_circ: 0.936571
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Ran for 37050 frames Cell Events: 996 mean_circ: 0.93665
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Ran for 55550 frames Cell Events: 1615 mean_circ: 0.935865
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Ran for 56550 frames Cell Events: 1658 mean_circ: 0.93591
Ran for 57050 frames Cell Events: 1684 mean_circ: 0.936089
Ran for 57550 frames Cell Events: 1704 mean_circ: 0.936048
Ran for 59050 frames Cell Events: 1771 mean_circ: 0.936177
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Ran for 61050 frames Cell Events: 1863 mean_circ: 0.936044
Ran for 61550 frames Cell Events: 1889 mean_circ: 0.936217
Ran for 62050 frames Cell Events: 1897 mean_circ: 0.93627
Ran for 62550 frames Cell Events: 1909 mean_circ: 0.936307
Ran for 63050 frames Cell Events: 1930 mean_circ: 0.936375
Ran for 64050 frames Cell Events: 1967 mean_circ: 0.936503
Ran for 64550 frames Cell Events: 1992 mean_circ: 0.936695
Ran for 65050 frames Cell Events: 2008 mean_circ: 0.936806
Ran for 65550 frames Cell Events: 2019 mean_circ: 0.936847
Ran for 66050 frames Cell Events: 2028 mean_circ: 0.936914
Ran for 66550 frames Cell Events: 2040 mean_circ: 0.936922
Ran for 67550 frames Cell Events: 2064 mean_circ: 0.937036
Ran for 68050 frames Cell Events: 2073 mean_circ: 0.936969
Ran for 68550 frames Cell Events: 2084 mean_circ: 0.93687
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Ran for 69550 frames Cell Events: 2109 mean_circ: 0.936714
Ran for 70550 frames Cell Events: 2130 mean_circ: 0.936735
Ran for 71050 frames Cell Events: 2140 mean_circ: 0.936781
Ran for 71550 frames Cell Events: 2155 mean_circ: 0.936779
Ran for 72050 frames Cell Events: 2171 mean_circ: 0.936832
Ran for 72550 frames Cell Events: 2186 mean_circ: 0.936676
Ran for 74050 frames Cell Events: 2224 mean_circ: 0.936882
Ran for 74550 frames Cell Events: 2237 mean_circ: 0.93695
Ran for 75050 frames Cell Events: 2250 mean_circ: 0.936936
Ran for 75550 frames Cell Events: 2271 mean_circ: 0.937028
Ran for 76550 frames Cell Events: 2287 mean_circ: 0.937076
Ran for 78050 frames Cell Events: 2360 mean_circ: 0.936948
Ran for 79050 frames Cell Events: 2382 mean_circ: 0.936795
Ran for 79550 frames Cell Events: 2393 mean_circ: 0.93684
Ran for 80050 frames Cell Events: 2407 mean_circ: 0.93676
Ran for 80550 frames Cell Events: 2413 mean_circ: 0.936835
Ran for 81050 frames Cell Events: 2423 mean_circ: 0.936841
Ran for 82050 frames Cell Events: 2444 mean_circ: 0.936826
Ran for 82550 frames Cell Events: 2449 mean_circ: 0.936758
Ran for 84050 frames Cell Events: 2488 mean_circ: 0.936754
Ran for 86050 frames Cell Events: 2538 mean_circ: 0.936613
Ran for 88550 frames Cell Events: 2666 mean_circ: 0.936377
Ran for 89050 frames Cell Events: 2681 mean_circ: 0.936391
Ran for 89550 frames Cell Events: 2690 mean_circ: 0.936372
Ran for 90050 frames Cell Events: 2710 mean_circ: 0.936376
Ran for 90550 frames Cell Events: 2721 mean_circ: 0.93643
Ran for 91050 frames Cell Events: 2733 mean_circ: 0.936438
Ran for 91550 frames Cell Events: 2750 mean_circ: 0.936433
Ran for 92050 frames Cell Events: 2770 mean_circ: 0.936528
Ran for 92550 frames Cell Events: 2789 mean_circ: 0.936457
Ran for 94050 frames Cell Events: 2848 mean_circ: 0.936383
Ran for 96050 frames Cell Events: 2963 mean_circ: 0.936437
Ran for 96550 frames Cell Events: 2984 mean_circ: 0.93657
Ran for 97050 frames Cell Events: 2999 mean_circ: 0.936627
Ran for 97550 frames Cell Events: 3012 mean_circ: 0.936658
Ran for 98050 frames Cell Events: 3029 mean_circ: 0.936716
Ran for 99550 frames Cell Events: 3076 mean_circ: 0.936566
Ran for 100050 frames Cell Events: 3092 mean_circ: 0.936568
Ran for 100550 frames Cell Events: 3106 mean_circ: 0.936504
Ran for 101050 frames Cell Events: 3111 mean_circ: 0.936565
Ran for 102050 frames Cell Events: 3138 mean_circ: 0.936659
Ran for 102550 frames Cell Events: 3151 mean_circ: 0.936628
Ran for 103050 frames Cell Events: 3162 mean_circ: 0.936652
Ran for 103550 frames Cell Events: 3184 mean_circ: 0.936691
Ran for 104050 frames Cell Events: 3199 mean_circ: 0.936808
Ran for 104550 frames Cell Events: 3219 mean_circ: 0.936874
Ran for 105550 frames Cell Events: 3253 mean_circ: 0.936838
Ran for 106050 frames Cell Events: 3266 mean_circ: 0.936846
Ran for 106550 frames Cell Events: 3279 mean_circ: 0.936808
Ran for 107550 frames Cell Events: 3312 mean_circ: 0.936859
Ran for 109050 frames Cell Events: 3360 mean_circ: 0.937074
Ran for 109550 frames Cell Events: 3369 mean_circ: 0.937075
Ran for 110050 frames Cell Events: 3389 mean_circ: 0.937032
Ran for 110550 frames Cell Events: 3413 mean_circ: 0.936973
Ran for 111550 frames Cell Events: 3452 mean_circ: 0.9371
Ran for 112550 frames Cell Events: 3479 mean_circ: 0.937239
Ran for 113050 frames Cell Events: 3501 mean_circ: 0.937255
Ran for 114050 frames Cell Events: 3549 mean_circ: 0.937251
Ran for 115050 frames Cell Events: 3583 mean_circ: 0.937224
Ran for 115550 frames Cell Events: 3595 mean_circ: 0.937184
Ran for 116050 frames Cell Events: 3616 mean_circ: 0.937229
Ran for 116550 frames Cell Events: 3630 mean_circ: 0.937177
Ran for 117050 frames Cell Events: 3651 mean_circ: 0.936935
Ran for 117550 frames Cell Events: 3665 mean_circ: 0.936912
Ran for 118050 frames Cell Events: 3676 mean_circ: 0.936929
Ran for 118550 frames Cell Events: 3691 mean_circ: 0.936987
Ran for 120050 frames Cell Events: 3738 mean_circ: 0.936967
Ran for 121050 frames Cell Events: 3758 mean_circ: 0.936918
Ran for 121550 frames Cell Events: 3763 mean_circ: 0.936899
Ran for 122050 frames Cell Events: 3780 mean_circ: 0.93686
Ran for 122550 frames Cell Events: 3793 mean_circ: 0.936806
Ran for 123050 frames Cell Events: 3831 mean_circ: 0.936784
Ran for 125050 frames Cell Events: 3917 mean_circ: 0.936928
Ran for 125550 frames Cell Events: 3942 mean_circ: 0.936963
Ran for 126550 frames Cell Events: 3978 mean_circ: 0.936969
Ran for 127050 frames Cell Events: 3987 mean_circ: 0.936911
Ran for 127550 frames Cell Events: 4009 mean_circ: 0.936958
Ran for 128550 frames Cell Events: 4041 mean_circ: 0.936983
Ran for 129050 frames Cell Events: 4049 mean_circ: 0.937015
Ran for 130050 frames Cell Events: 4075 mean_circ: 0.93706
Ran for 130550 frames Cell Events: 4093 mean_circ: 0.936927
Ran for 131550 frames Cell Events: 4134 mean_circ: 0.93689
Ran for 133050 frames Cell Events: 4175 mean_circ: 0.936878
Ran for 134050 frames Cell Events: 4210 mean_circ: 0.936686
Ran for 134550 frames Cell Events: 4225 mean_circ: 0.9367
Ran for 135550 frames Cell Events: 4255 mean_circ: 0.936802
Ran for 137050 frames Cell Events: 4282 mean_circ: 0.936904
Ran for 138050 frames Cell Events: 4324 mean_circ: 0.936891
Ran for 138550 frames Cell Events: 4339 mean_circ: 0.936875
Ran for 139050 frames Cell Events: 4362 mean_circ: 0.936892
Ran for 139550 frames Cell Events: 4380 mean_circ: 0.936801
Ran for 140550 frames Cell Events: 4417 mean_circ: 0.936766
Ran for 141050 frames Cell Events: 4430 mean_circ: 0.936802
Ran for 142050 frames Cell Events: 4449 mean_circ: 0.936702
Ran for 142550 frames Cell Events: 4465 mean_circ: 0.936657
Ran for 143050 frames Cell Events: 4477 mean_circ: 0.936671
Ran for 143550 frames Cell Events: 4495 mean_circ: 0.936673
Ran for 144050 frames Cell Events: 4511 mean_circ: 0.936719
Ran for 144550 frames Cell Events: 4524 mean_circ: 0.936759
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Ran for 146050 frames Cell Events: 4575 mean_circ: 0.936877
Ran for 147050 frames Cell Events: 4636 mean_circ: 0.936993
Ran for 147550 frames Cell Events: 4652 mean_circ: 0.936945
Ran for 148050 frames Cell Events: 4666 mean_circ: 0.936933
Ran for 148550 frames Cell Events: 4677 mean_circ: 0.936887
Ran for 149050 frames Cell Events: 4689 mean_circ: 0.936894
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Ran for 151050 frames Cell Events: 4755 mean_circ: 0.936707
Ran for 151550 frames Cell Events: 4763 mean_circ: 0.936714
Ran for 152050 frames Cell Events: 4774 mean_circ: 0.936673
Ran for 152550 frames Cell Events: 4777 mean_circ: 0.936678
Ran for 153050 frames Cell Events: 4793 mean_circ: 0.936594
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Ran for 157050 frames Cell Events: 4969 mean_circ: 0.936691
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Ran for 161550 frames Cell Events: 5105 mean_circ: 0.936769
Ran for 162050 frames Cell Events: 5124 mean_circ: 0.936799
Ran for 162550 frames Cell Events: 5140 mean_circ: 0.936819
Ran for 163550 frames Cell Events: 5171 mean_circ: 0.936888
Ran for 164050 frames Cell Events: 5186 mean_circ: 0.936922
Ran for 164550 frames Cell Events: 5199 mean_circ: 0.936896
Ran for 165550 frames Cell Events: 5241 mean_circ: 0.936829
Ran for 166050 frames Cell Events: 5248 mean_circ: 0.936844
Ran for 166550 frames Cell Events: 5261 mean_circ: 0.936852
Ran for 167550 frames Cell Events: 5290 mean_circ: 0.936891
Ran for 168550 frames Cell Events: 5314 mean_circ: 0.936909
Ran for 169050 frames Cell Events: 5333 mean_circ: 0.936855
Ran for 169550 frames Cell Events: 5349 mean_circ: 0.936891
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Ran for 171050 frames Cell Events: 5395 mean_circ: 0.936893
Ran for 171550 frames Cell Events: 5423 mean_circ: 0.936982
Ran for 172550 frames Cell Events: 5463 mean_circ: 0.937051
Ran for 173050 frames Cell Events: 5478 mean_circ: 0.937089
Ran for 173550 frames Cell Events: 5500 mean_circ: 0.937112
Ran for 174050 frames Cell Events: 5509 mean_circ: 0.937096
Ran for 174550 frames Cell Events: 5524 mean_circ: 0.937064
Ran for 175050 frames Cell Events: 5542 mean_circ: 0.936976
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Ran for 176050 frames Cell Events: 5573 mean_circ: 0.936998
Ran for 177050 frames Cell Events: 5626 mean_circ: 0.936937
Ran for 178550 frames Cell Events: 5679 mean_circ: 0.936922
Ran for 179050 frames Cell Events: 5692 mean_circ: 0.936878
Ran for 180550 frames Cell Events: 5742 mean_circ: 0.936927
Ran for 181550 frames Cell Events: 5775 mean_circ: 0.936921
Ran for 182050 frames Cell Events: 5797 mean_circ: 0.936932
Ran for 182550 frames Cell Events: 5806 mean_circ: 0.936891
Ran for 183050 frames Cell Events: 5819 mean_circ: 0.936923
Ran for 183550 frames Cell Events: 5837 mean_circ: 0.936834
Ran for 184050 frames Cell Events: 5843 mean_circ: 0.936864
Ran for 184550 frames Cell Events: 5859 mean_circ: 0.936783
Ran for 185050 frames Cell Events: 5881 mean_circ: 0.936735
Ran for 186050 frames Cell Events: 5943 mean_circ: 0.936708
Ran for 186550 frames Cell Events: 5963 mean_circ: 0.936722
Ran for 187050 frames Cell Events: 5984 mean_circ: 0.936724
Ran for 187550 frames Cell Events: 5995 mean_circ: 0.936696
Ran for 188050 frames Cell Events: 6015 mean_circ: 0.936699
Ran for 189550 frames Cell Events: 6060 mean_circ: 0.936528
Ran for 190050 frames Cell Events: 6074 mean_circ: 0.936566
Ran for 190550 frames Cell Events: 6084 mean_circ: 0.936594
Ran for 191050 frames Cell Events: 6099 mean_circ: 0.936613
Ran for 193050 frames Cell Events: 6185 mean_circ: 0.936533
Ran for 193550 frames Cell Events: 6196 mean_circ: 0.936532
Ran for 194050 frames Cell Events: 6213 mean_circ: 0.936579
Ran for 194550 frames Cell Events: 6228 mean_circ: 0.936532
Ran for 195050 frames Cell Events: 6248 mean_circ: 0.93653
Ran for 195550 frames Cell Events: 6265 mean_circ: 0.936454
Ran for 196050 frames Cell Events: 6274 mean_circ: 0.936478
Ran for 196550 frames Cell Events: 6286 mean_circ: 0.936497
Ran for 197050 frames Cell Events: 6301 mean_circ: 0.936507
Ran for 197550 frames Cell Events: 6303 mean_circ: 0.936536
Ran for 198050 frames Cell Events: 6315 mean_circ: 0.936544
Ran for 198550 frames Cell Events: 6329 mean_circ: 0.936528
Ran for 199050 frames Cell Events: 6338 mean_circ: 0.936464
Ran for 199550 frames Cell Events: 6346 mean_circ: 0.93649
Ran for 200550 frames Cell Events: 6383 mean_circ: 0.936417
Ran for 201550 frames Cell Events: 6422 mean_circ: 0.936379
Ran for 202050 frames Cell Events: 6431 mean_circ: 0.936389
Ran for 202550 frames Cell Events: 6459 mean_circ: 0.936408
Ran for 203050 frames Cell Events: 6470 mean_circ: 0.936359
Ran for 203550 frames Cell Events: 6491 mean_circ: 0.936354
Ran for 204050 frames Cell Events: 6506 mean_circ: 0.936377
Ran for 204550 frames Cell Events: 6522 mean_circ: 0.936357
Ran for 205550 frames Cell Events: 6560 mean_circ: 0.936385
Ran for 207550 frames Cell Events: 6647 mean_circ: 0.936347
Ran for 208050 frames Cell Events: 6661 mean_circ: 0.936356
Ran for 208550 frames Cell Events: 6676 mean_circ: 0.9364
Ran for 209550 frames Cell Events: 6709 mean_circ: 0.93639
Ran for 210050 frames Cell Events: 6723 mean_circ: 0.936375
Ran for 210550 frames Cell Events: 6740 mean_circ: 0.936301
Ran for 211050 frames Cell Events: 6749 mean_circ: 0.936311
Ran for 211550 frames Cell Events: 6769 mean_circ: 0.936301
Ran for 212050 frames Cell Events: 6785 mean_circ: 0.936313
Ran for 212550 frames Cell Events: 6797 mean_circ: 0.936307
Ran for 213050 frames Cell Events: 6819 mean_circ: 0.936278
Ran for 213550 frames Cell Events: 6838 mean_circ: 0.936254
Ran for 214050 frames Cell Events: 6855 mean_circ: 0.936222
Ran for 214550 frames Cell Events: 6869 mean_circ: 0.936221
Ran for 215050 frames Cell Events: 6881 mean_circ: 0.936209
Ran for 215550 frames Cell Events: 6904 mean_circ: 0.936223
Ran for 216050 frames Cell Events: 6920 mean_circ: 0.936202
Ran for 216550 frames Cell Events: 6938 mean_circ: 0.936171
Ran for 217550 frames Cell Events: 6975 mean_circ: 0.936266
Ran for 218050 frames Cell Events: 6997 mean_circ: 0.936234
Ran for 219050 frames Cell Events: 7025 mean_circ: 0.936238
Ran for 219550 frames Cell Events: 7039 mean_circ: 0.936204
Ran for 220050 frames Cell Events: 7043 mean_circ: 0.936189
Ran for 220550 frames Cell Events: 7052 mean_circ: 0.936195
Ran for 221050 frames Cell Events: 7069 mean_circ: 0.936236
Ran for 221550 frames Cell Events: 7091 mean_circ: 0.936235
Ran for 222050 frames Cell Events: 7104 mean_circ: 0.93622
Ran for 222550 frames Cell Events: 7117 mean_circ: 0.936223
Ran for 223550 frames Cell Events: 7139 mean_circ: 0.936237
Ran for 224050 frames Cell Events: 7158 mean_circ: 0.936209
Ran for 225050 frames Cell Events: 7184 mean_circ: 0.936236
Ran for 225550 frames Cell Events: 7203 mean_circ: 0.936251
Ran for 226050 frames Cell Events: 7215 mean_circ: 0.936247
Ran for 226550 frames Cell Events: 7231 mean_circ: 0.936271
Ran for 227050 frames Cell Events: 7245 mean_circ: 0.936286
Ran for 227550 frames Cell Events: 7274 mean_circ: 0.936332
Ran for 228050 frames Cell Events: 7296 mean_circ: 0.936316
Ran for 228550 frames Cell Events: 7320 mean_circ: 0.93632
Ran for 229550 frames Cell Events: 7366 mean_circ: 0.936289
Ran for 230050 frames Cell Events: 7380 mean_circ: 0.936326
Ran for 230550 frames Cell Events: 7395 mean_circ: 0.936355
Ran for 231050 frames Cell Events: 7406 mean_circ: 0.9364
Ran for 231550 frames Cell Events: 7426 mean_circ: 0.936398
Ran for 232050 frames Cell Events: 7436 mean_circ: 0.936383
Ran for 232550 frames Cell Events: 7452 mean_circ: 0.936346
Ran for 233550 frames Cell Events: 7483 mean_circ: 0.936339
Ran for 234550 frames Cell Events: 7511 mean_circ: 0.936322
Ran for 235050 frames Cell Events: 7524 mean_circ: 0.936368
Ran for 235550 frames Cell Events: 7548 mean_circ: 0.936332
Ran for 237050 frames Cell Events: 7663 mean_circ: 0.936382
Ran for 237550 frames Cell Events: 7681 mean_circ: 0.936392
Ran for 238050 frames Cell Events: 7697 mean_circ: 0.936384
Ran for 239050 frames Cell Events: 7756 mean_circ: 0.936445
Ran for 239550 frames Cell Events: 7770 mean_circ: 0.936413
Ran for 240050 frames Cell Events: 7785 mean_circ: 0.936425
Ran for 241550 frames Cell Events: 7836 mean_circ: 0.93638
Ran for 242050 frames Cell Events: 7859 mean_circ: 0.936381
Ran for 242550 frames Cell Events: 7881 mean_circ: 0.936395
Ran for 243050 frames Cell Events: 7892 mean_circ: 0.936404
Ran for 243550 frames Cell Events: 7899 mean_circ: 0.936394
Ran for 244050 frames Cell Events: 7910 mean_circ: 0.936393
Ran for 244550 frames Cell Events: 7931 mean_circ: 0.936385
Ran for 245050 frames Cell Events: 7946 mean_circ: 0.936361
Ran for 245550 frames Cell Events: 7960 mean_circ: 0.936332
Ran for 246050 frames Cell Events: 7977 mean_circ: 0.936334
Ran for 246550 frames Cell Events: 7994 mean_circ: 0.936311
Ran for 247050 frames Cell Events: 8004 mean_circ: 0.936326
Ran for 247550 frames Cell Events: 8023 mean_circ: 0.93637
End this measurment..
Stopping time: 5.58597e+008
****************************************
Measurement finished
Mean Circularitiy: 0.936345
Mean Area: 607.609
Mean FL-1 intensity: 3196.03
Mean FL-2 intensity: 4080.39
Mean FL-3 intensity: 0
frames processed: 243304
Total Time: 123903ms
Number of Runs (new bg img) 0
Frames collected: 247681
Skipped frames: 92138
Rescued Frames: 4472466
Samples DAQ: 61920661
Samples written: 123840314
Samples per Channel: 61920157
FPS: 1998.99
Samples per second: 499746
Expected samples/s: 500000
Events: 8025
Events per second: 64.7683
jumped back (PMT): 5292
#Frames read, frequency
# 0 frames :333467
# 1 frames :146094
# 2 frames :4697
# 3 frames :1336
# 4 frames :721
# 5 frames :309
# 6 frames :2151
# 7 frames :2366
# 8 frames :1183
# 9 frames :651
# 10 frames :377
# 11 frames :300
# 12 frames :301
# 13 frames :297
# 14 frames :226
# 15 frames :167
# 16 frames :148
# 17 frames :98
# 18 frames :65
# 19 frames :61
# 20 frames :41
# 21 frames :54
# 22 frames :46
# 23 frames :26
# 24 frames :22
# 25 frames :10
# 26 frames :25
# 27 frames :15
# 28 frames :6
# 29 frames :9
# 30 frames :10
# 31 frames :10
# 32 frames :7
# 33 frames :5
# 34 frames :2
# 35 frames :3
# 36 frames :2
# 37 frames :1
# 38 frames :2
# 39 frames :1
# 40 frames :2
# 42 frames :4
# 43 frames :5
# 44 frames :3
# 47 frames :1
# 49 frames :1
# 50 frames :2
# 55 frames :2
# 65 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.8802
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0