Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_19.09.12
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "56ec74569abbe84e558e123df5b81bc4",
"name": "M1_20170521_1844_dsRNA_L4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:09:32"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8104 (max 8105) in '8104'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.6282
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.55708e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 13 mean_circ: 0.942597
Ran for 1050 frames Cell Events: 26 mean_circ: 0.935408
Ran for 1550 frames Cell Events: 33 mean_circ: 0.936547
Ran for 2050 frames Cell Events: 39 mean_circ: 0.937595
Ran for 2550 frames Cell Events: 54 mean_circ: 0.940542
Ran for 3550 frames Cell Events: 80 mean_circ: 0.935068
Ran for 4550 frames Cell Events: 120 mean_circ: 0.927251
Ran for 5050 frames Cell Events: 130 mean_circ: 0.929697
Ran for 6050 frames Cell Events: 144 mean_circ: 0.92908
Ran for 6550 frames Cell Events: 147 mean_circ: 0.928949
Ran for 7050 frames Cell Events: 165 mean_circ: 0.928934
Ran for 8050 frames Cell Events: 177 mean_circ: 0.92988
Ran for 8550 frames Cell Events: 187 mean_circ: 0.929929
Ran for 9550 frames Cell Events: 196 mean_circ: 0.930126
Ran for 10050 frames Cell Events: 205 mean_circ: 0.928623
Ran for 10550 frames Cell Events: 209 mean_circ: 0.928248
Ran for 11050 frames Cell Events: 216 mean_circ: 0.92834
Ran for 11550 frames Cell Events: 224 mean_circ: 0.927315
Ran for 12050 frames Cell Events: 234 mean_circ: 0.927299
Ran for 12550 frames Cell Events: 238 mean_circ: 0.927747
Ran for 13050 frames Cell Events: 243 mean_circ: 0.927608
Ran for 13550 frames Cell Events: 255 mean_circ: 0.928436
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Ran for 19050 frames Cell Events: 369 mean_circ: 0.930962
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Ran for 24050 frames Cell Events: 480 mean_circ: 0.931916
Ran for 25550 frames Cell Events: 522 mean_circ: 0.931106
Ran for 26050 frames Cell Events: 534 mean_circ: 0.93065
Ran for 26550 frames Cell Events: 547 mean_circ: 0.931061
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Ran for 28050 frames Cell Events: 579 mean_circ: 0.931082
Ran for 28550 frames Cell Events: 588 mean_circ: 0.930758
Ran for 29050 frames Cell Events: 596 mean_circ: 0.930645
Ran for 29550 frames Cell Events: 603 mean_circ: 0.930884
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Ran for 30550 frames Cell Events: 616 mean_circ: 0.930734
Ran for 31050 frames Cell Events: 625 mean_circ: 0.930583
Ran for 32050 frames Cell Events: 641 mean_circ: 0.930781
Ran for 32550 frames Cell Events: 654 mean_circ: 0.930534
Ran for 33050 frames Cell Events: 663 mean_circ: 0.930914
Ran for 33550 frames Cell Events: 670 mean_circ: 0.931045
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Ran for 34550 frames Cell Events: 687 mean_circ: 0.931102
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Ran for 35550 frames Cell Events: 708 mean_circ: 0.93048
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Ran for 43050 frames Cell Events: 879 mean_circ: 0.929635
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Ran for 48050 frames Cell Events: 970 mean_circ: 0.930031
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Ran for 50550 frames Cell Events: 1003 mean_circ: 0.930478
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Ran for 53050 frames Cell Events: 1045 mean_circ: 0.929787
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Ran for 54550 frames Cell Events: 1069 mean_circ: 0.929748
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Ran for 56050 frames Cell Events: 1090 mean_circ: 0.929661
Ran for 56550 frames Cell Events: 1097 mean_circ: 0.929806
Ran for 58050 frames Cell Events: 1137 mean_circ: 0.930032
Ran for 58550 frames Cell Events: 1150 mean_circ: 0.930217
Ran for 59550 frames Cell Events: 1170 mean_circ: 0.929847
Ran for 60050 frames Cell Events: 1184 mean_circ: 0.929996
Ran for 60550 frames Cell Events: 1190 mean_circ: 0.930194
Ran for 61050 frames Cell Events: 1202 mean_circ: 0.930094
Ran for 61550 frames Cell Events: 1220 mean_circ: 0.929934
Ran for 62050 frames Cell Events: 1229 mean_circ: 0.929578
Ran for 62550 frames Cell Events: 1236 mean_circ: 0.929496
Ran for 63050 frames Cell Events: 1243 mean_circ: 0.929284
Ran for 63550 frames Cell Events: 1257 mean_circ: 0.92941
Ran for 64550 frames Cell Events: 1282 mean_circ: 0.929033
Ran for 65050 frames Cell Events: 1293 mean_circ: 0.929195
Ran for 65550 frames Cell Events: 1304 mean_circ: 0.929162
Ran for 66050 frames Cell Events: 1307 mean_circ: 0.929054
Ran for 66550 frames Cell Events: 1309 mean_circ: 0.929112
Ran for 67050 frames Cell Events: 1319 mean_circ: 0.929107
Ran for 67550 frames Cell Events: 1325 mean_circ: 0.929229
Ran for 68050 frames Cell Events: 1330 mean_circ: 0.929169
Ran for 68550 frames Cell Events: 1341 mean_circ: 0.92915
Ran for 69050 frames Cell Events: 1351 mean_circ: 0.929207
Ran for 69550 frames Cell Events: 1359 mean_circ: 0.92922
Ran for 70050 frames Cell Events: 1372 mean_circ: 0.928959
Ran for 70550 frames Cell Events: 1379 mean_circ: 0.928942
Ran for 71050 frames Cell Events: 1387 mean_circ: 0.929052
Ran for 71550 frames Cell Events: 1393 mean_circ: 0.928945
Ran for 72050 frames Cell Events: 1395 mean_circ: 0.928912
Ran for 72550 frames Cell Events: 1405 mean_circ: 0.928842
Ran for 73050 frames Cell Events: 1418 mean_circ: 0.92877
Ran for 73550 frames Cell Events: 1431 mean_circ: 0.928865
Ran for 74050 frames Cell Events: 1433 mean_circ: 0.928731
Ran for 74550 frames Cell Events: 1436 mean_circ: 0.928771
Ran for 75050 frames Cell Events: 1447 mean_circ: 0.928809
Ran for 76550 frames Cell Events: 1475 mean_circ: 0.928964
Ran for 77050 frames Cell Events: 1487 mean_circ: 0.929009
Ran for 77550 frames Cell Events: 1499 mean_circ: 0.9288
Ran for 78050 frames Cell Events: 1506 mean_circ: 0.928886
Ran for 78550 frames Cell Events: 1521 mean_circ: 0.929047
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Ran for 79550 frames Cell Events: 1535 mean_circ: 0.929329
Ran for 80050 frames Cell Events: 1540 mean_circ: 0.929293
Ran for 80550 frames Cell Events: 1548 mean_circ: 0.929187
Ran for 81050 frames Cell Events: 1558 mean_circ: 0.929227
Ran for 81550 frames Cell Events: 1567 mean_circ: 0.92933
Ran for 82550 frames Cell Events: 1584 mean_circ: 0.929533
Ran for 83050 frames Cell Events: 1595 mean_circ: 0.929734
Ran for 83550 frames Cell Events: 1610 mean_circ: 0.929793
Ran for 84550 frames Cell Events: 1634 mean_circ: 0.929782
Ran for 85550 frames Cell Events: 1650 mean_circ: 0.92985
Ran for 86050 frames Cell Events: 1660 mean_circ: 0.929803
Ran for 86550 frames Cell Events: 1674 mean_circ: 0.929614
Ran for 87050 frames Cell Events: 1689 mean_circ: 0.929393
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Ran for 90550 frames Cell Events: 1751 mean_circ: 0.929721
Ran for 91050 frames Cell Events: 1763 mean_circ: 0.929653
Ran for 91550 frames Cell Events: 1770 mean_circ: 0.92948
Ran for 92050 frames Cell Events: 1783 mean_circ: 0.929491
Ran for 92550 frames Cell Events: 1789 mean_circ: 0.929327
Ran for 93050 frames Cell Events: 1795 mean_circ: 0.929363
Ran for 93550 frames Cell Events: 1812 mean_circ: 0.929333
Ran for 94050 frames Cell Events: 1822 mean_circ: 0.929441
Ran for 94550 frames Cell Events: 1831 mean_circ: 0.929406
Ran for 96050 frames Cell Events: 1868 mean_circ: 0.928986
Ran for 96550 frames Cell Events: 1888 mean_circ: 0.928753
Ran for 97050 frames Cell Events: 1897 mean_circ: 0.928698
Ran for 97550 frames Cell Events: 1915 mean_circ: 0.928611
Ran for 98050 frames Cell Events: 1940 mean_circ: 0.928407
Ran for 98550 frames Cell Events: 1962 mean_circ: 0.928087
Ran for 99050 frames Cell Events: 1968 mean_circ: 0.928127
Ran for 99550 frames Cell Events: 1975 mean_circ: 0.928234
Ran for 100050 frames Cell Events: 1986 mean_circ: 0.928215
Ran for 101050 frames Cell Events: 2008 mean_circ: 0.928194
Ran for 101550 frames Cell Events: 2027 mean_circ: 0.928178
Ran for 102050 frames Cell Events: 2043 mean_circ: 0.92821
Ran for 102550 frames Cell Events: 2055 mean_circ: 0.928232
Ran for 103050 frames Cell Events: 2079 mean_circ: 0.928085
Ran for 103550 frames Cell Events: 2085 mean_circ: 0.928138
Ran for 104050 frames Cell Events: 2093 mean_circ: 0.928188
Ran for 105550 frames Cell Events: 2121 mean_circ: 0.928278
Ran for 106050 frames Cell Events: 2130 mean_circ: 0.92835
Ran for 107050 frames Cell Events: 2152 mean_circ: 0.928225
Ran for 107550 frames Cell Events: 2166 mean_circ: 0.928227
Ran for 108050 frames Cell Events: 2178 mean_circ: 0.928102
Ran for 108550 frames Cell Events: 2193 mean_circ: 0.928182
Ran for 109050 frames Cell Events: 2196 mean_circ: 0.928206
Ran for 109550 frames Cell Events: 2206 mean_circ: 0.928203
Ran for 110050 frames Cell Events: 2220 mean_circ: 0.928136
Ran for 111550 frames Cell Events: 2272 mean_circ: 0.928678
Ran for 112050 frames Cell Events: 2289 mean_circ: 0.928887
Ran for 112550 frames Cell Events: 2305 mean_circ: 0.928764
Ran for 113550 frames Cell Events: 2345 mean_circ: 0.928728
Ran for 114050 frames Cell Events: 2358 mean_circ: 0.928706
Ran for 115550 frames Cell Events: 2389 mean_circ: 0.928594
Ran for 116050 frames Cell Events: 2396 mean_circ: 0.928641
Ran for 116550 frames Cell Events: 2407 mean_circ: 0.928654
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Ran for 118050 frames Cell Events: 2438 mean_circ: 0.928851
Ran for 118550 frames Cell Events: 2451 mean_circ: 0.929013
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Ran for 120050 frames Cell Events: 2486 mean_circ: 0.928923
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Ran for 121550 frames Cell Events: 2508 mean_circ: 0.928862
Ran for 122050 frames Cell Events: 2520 mean_circ: 0.928848
Ran for 122550 frames Cell Events: 2526 mean_circ: 0.928856
Ran for 123050 frames Cell Events: 2538 mean_circ: 0.928926
Ran for 124050 frames Cell Events: 2562 mean_circ: 0.929013
Ran for 124550 frames Cell Events: 2574 mean_circ: 0.929029
Ran for 125050 frames Cell Events: 2593 mean_circ: 0.928838
Ran for 125550 frames Cell Events: 2604 mean_circ: 0.928825
Ran for 126550 frames Cell Events: 2622 mean_circ: 0.928828
Ran for 127050 frames Cell Events: 2632 mean_circ: 0.928828
Ran for 127550 frames Cell Events: 2635 mean_circ: 0.928814
Ran for 128050 frames Cell Events: 2642 mean_circ: 0.928839
Ran for 128550 frames Cell Events: 2654 mean_circ: 0.928889
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Ran for 143550 frames Cell Events: 2984 mean_circ: 0.928697
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Ran for 144550 frames Cell Events: 3011 mean_circ: 0.928768
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Ran for 146050 frames Cell Events: 3039 mean_circ: 0.92882
Ran for 146550 frames Cell Events: 3055 mean_circ: 0.928703
Ran for 147050 frames Cell Events: 3071 mean_circ: 0.928702
Ran for 147550 frames Cell Events: 3081 mean_circ: 0.928764
Ran for 148050 frames Cell Events: 3096 mean_circ: 0.928883
Ran for 148550 frames Cell Events: 3103 mean_circ: 0.928873
Ran for 149050 frames Cell Events: 3114 mean_circ: 0.928833
Ran for 149550 frames Cell Events: 3122 mean_circ: 0.928766
Ran for 150050 frames Cell Events: 3138 mean_circ: 0.92879
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Ran for 151050 frames Cell Events: 3165 mean_circ: 0.928756
Ran for 151550 frames Cell Events: 3178 mean_circ: 0.928786
Ran for 152550 frames Cell Events: 3208 mean_circ: 0.928816
Ran for 153050 frames Cell Events: 3217 mean_circ: 0.92889
Ran for 153550 frames Cell Events: 3225 mean_circ: 0.928891
Ran for 154050 frames Cell Events: 3232 mean_circ: 0.928915
Ran for 154550 frames Cell Events: 3246 mean_circ: 0.928809
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Ran for 156550 frames Cell Events: 3300 mean_circ: 0.928948
Ran for 157050 frames Cell Events: 3317 mean_circ: 0.928892
Ran for 157550 frames Cell Events: 3330 mean_circ: 0.928908
Ran for 158050 frames Cell Events: 3346 mean_circ: 0.928934
Ran for 159050 frames Cell Events: 3369 mean_circ: 0.929114
Ran for 159550 frames Cell Events: 3375 mean_circ: 0.929081
Ran for 161050 frames Cell Events: 3411 mean_circ: 0.929156
Ran for 161550 frames Cell Events: 3417 mean_circ: 0.929194
Ran for 162050 frames Cell Events: 3426 mean_circ: 0.929194
Ran for 162550 frames Cell Events: 3436 mean_circ: 0.929252
Ran for 163050 frames Cell Events: 3444 mean_circ: 0.929271
Ran for 163550 frames Cell Events: 3459 mean_circ: 0.929272
Ran for 164050 frames Cell Events: 3471 mean_circ: 0.92924
Ran for 164550 frames Cell Events: 3477 mean_circ: 0.929313
Ran for 165050 frames Cell Events: 3482 mean_circ: 0.929297
Ran for 165550 frames Cell Events: 3492 mean_circ: 0.929374
Ran for 166050 frames Cell Events: 3498 mean_circ: 0.929424
Ran for 166550 frames Cell Events: 3511 mean_circ: 0.929389
Ran for 167050 frames Cell Events: 3527 mean_circ: 0.929472
Ran for 167550 frames Cell Events: 3540 mean_circ: 0.929425
Ran for 168050 frames Cell Events: 3550 mean_circ: 0.929452
Ran for 168550 frames Cell Events: 3555 mean_circ: 0.92949
Ran for 170550 frames Cell Events: 3592 mean_circ: 0.929514
Ran for 171050 frames Cell Events: 3603 mean_circ: 0.92956
Ran for 171550 frames Cell Events: 3618 mean_circ: 0.929631
Ran for 172050 frames Cell Events: 3634 mean_circ: 0.929663
Ran for 172550 frames Cell Events: 3641 mean_circ: 0.929685
Ran for 173050 frames Cell Events: 3653 mean_circ: 0.929748
Ran for 173550 frames Cell Events: 3671 mean_circ: 0.92963
Ran for 174550 frames Cell Events: 3706 mean_circ: 0.929603
Ran for 176050 frames Cell Events: 3737 mean_circ: 0.929564
Ran for 176550 frames Cell Events: 3755 mean_circ: 0.929509
Ran for 177550 frames Cell Events: 3783 mean_circ: 0.929444
Ran for 178050 frames Cell Events: 3797 mean_circ: 0.929412
Ran for 178550 frames Cell Events: 3804 mean_circ: 0.929402
Ran for 179050 frames Cell Events: 3814 mean_circ: 0.929428
Ran for 179550 frames Cell Events: 3821 mean_circ: 0.929477
Ran for 180550 frames Cell Events: 3836 mean_circ: 0.929476
Ran for 181050 frames Cell Events: 3845 mean_circ: 0.929531
Ran for 181550 frames Cell Events: 3857 mean_circ: 0.929449
Ran for 182050 frames Cell Events: 3869 mean_circ: 0.929487
Ran for 182550 frames Cell Events: 3890 mean_circ: 0.929541
Ran for 183050 frames Cell Events: 3909 mean_circ: 0.929459
Ran for 183550 frames Cell Events: 3915 mean_circ: 0.92943
Ran for 184050 frames Cell Events: 3929 mean_circ: 0.929466
Ran for 186050 frames Cell Events: 3994 mean_circ: 0.9295
Ran for 187050 frames Cell Events: 4016 mean_circ: 0.929524
Ran for 187550 frames Cell Events: 4029 mean_circ: 0.929455
Ran for 188050 frames Cell Events: 4039 mean_circ: 0.929468
Ran for 189050 frames Cell Events: 4058 mean_circ: 0.929443
Ran for 189550 frames Cell Events: 4067 mean_circ: 0.929425
Ran for 190050 frames Cell Events: 4077 mean_circ: 0.929464
Ran for 191050 frames Cell Events: 4106 mean_circ: 0.929408
Ran for 191550 frames Cell Events: 4115 mean_circ: 0.929442
Ran for 192050 frames Cell Events: 4122 mean_circ: 0.929435
Ran for 192550 frames Cell Events: 4132 mean_circ: 0.929425
Ran for 193050 frames Cell Events: 4146 mean_circ: 0.929404
Ran for 193550 frames Cell Events: 4157 mean_circ: 0.929423
Ran for 194050 frames Cell Events: 4176 mean_circ: 0.929436
Ran for 194550 frames Cell Events: 4192 mean_circ: 0.929396
Ran for 195550 frames Cell Events: 4220 mean_circ: 0.929423
Ran for 196050 frames Cell Events: 4231 mean_circ: 0.929424
Ran for 197050 frames Cell Events: 4262 mean_circ: 0.929458
Ran for 197550 frames Cell Events: 4269 mean_circ: 0.929481
Ran for 198050 frames Cell Events: 4284 mean_circ: 0.929551
Ran for 198550 frames Cell Events: 4297 mean_circ: 0.929515
Ran for 199050 frames Cell Events: 4303 mean_circ: 0.929581
Ran for 199550 frames Cell Events: 4312 mean_circ: 0.929605
Ran for 200050 frames Cell Events: 4325 mean_circ: 0.929672
Ran for 200550 frames Cell Events: 4341 mean_circ: 0.929731
Ran for 202550 frames Cell Events: 4421 mean_circ: 0.929424
Ran for 203550 frames Cell Events: 4447 mean_circ: 0.929465
Ran for 204550 frames Cell Events: 4469 mean_circ: 0.929563
Ran for 205550 frames Cell Events: 4513 mean_circ: 0.929695
Ran for 206050 frames Cell Events: 4520 mean_circ: 0.929718
Ran for 206550 frames Cell Events: 4533 mean_circ: 0.929721
Ran for 207050 frames Cell Events: 4542 mean_circ: 0.929772
Ran for 207550 frames Cell Events: 4556 mean_circ: 0.929776
Ran for 208050 frames Cell Events: 4570 mean_circ: 0.929764
Ran for 208550 frames Cell Events: 4580 mean_circ: 0.929797
Ran for 209550 frames Cell Events: 4594 mean_circ: 0.929794
Ran for 210550 frames Cell Events: 4613 mean_circ: 0.929817
Ran for 211050 frames Cell Events: 4621 mean_circ: 0.929838
Ran for 211550 frames Cell Events: 4632 mean_circ: 0.929906
Ran for 212050 frames Cell Events: 4638 mean_circ: 0.929938
Ran for 212550 frames Cell Events: 4645 mean_circ: 0.929952
Ran for 213050 frames Cell Events: 4663 mean_circ: 0.929994
Ran for 214050 frames Cell Events: 4697 mean_circ: 0.929971
Ran for 214550 frames Cell Events: 4706 mean_circ: 0.930035
Ran for 215050 frames Cell Events: 4713 mean_circ: 0.930053
Ran for 215550 frames Cell Events: 4725 mean_circ: 0.930065
Ran for 216550 frames Cell Events: 4755 mean_circ: 0.929969
Ran for 217050 frames Cell Events: 4766 mean_circ: 0.930013
Ran for 217550 frames Cell Events: 4785 mean_circ: 0.930018
Ran for 218050 frames Cell Events: 4792 mean_circ: 0.930023
Ran for 218550 frames Cell Events: 4803 mean_circ: 0.930065
Ran for 219550 frames Cell Events: 4836 mean_circ: 0.930094
Ran for 220050 frames Cell Events: 4849 mean_circ: 0.930088
Ran for 221550 frames Cell Events: 4872 mean_circ: 0.93013
Ran for 222050 frames Cell Events: 4882 mean_circ: 0.930134
Ran for 223050 frames Cell Events: 4915 mean_circ: 0.930139
Ran for 224050 frames Cell Events: 4944 mean_circ: 0.930134
Ran for 225550 frames Cell Events: 4974 mean_circ: 0.930191
Ran for 226050 frames Cell Events: 4982 mean_circ: 0.930182
Ran for 226550 frames Cell Events: 4993 mean_circ: 0.930185
Ran for 227050 frames Cell Events: 4999 mean_circ: 0.930143
Ran for 228050 frames Cell Events: 5035 mean_circ: 0.930167
Ran for 229550 frames Cell Events: 5063 mean_circ: 0.930158
Ran for 230050 frames Cell Events: 5075 mean_circ: 0.930182
Ran for 230550 frames Cell Events: 5085 mean_circ: 0.930212
Ran for 231050 frames Cell Events: 5091 mean_circ: 0.930187
Ran for 232050 frames Cell Events: 5119 mean_circ: 0.930044
Ran for 233050 frames Cell Events: 5140 mean_circ: 0.930005
Ran for 234050 frames Cell Events: 5157 mean_circ: 0.930016
Ran for 234550 frames Cell Events: 5164 mean_circ: 0.930026
Ran for 235550 frames Cell Events: 5187 mean_circ: 0.929954
Ran for 238050 frames Cell Events: 5269 mean_circ: 0.929858
Ran for 238550 frames Cell Events: 5274 mean_circ: 0.929852
Ran for 239050 frames Cell Events: 5281 mean_circ: 0.929868
Ran for 239550 frames Cell Events: 5287 mean_circ: 0.929823
Ran for 240050 frames Cell Events: 5291 mean_circ: 0.929834
Ran for 240550 frames Cell Events: 5297 mean_circ: 0.929815
Ran for 241050 frames Cell Events: 5306 mean_circ: 0.929856
Ran for 241550 frames Cell Events: 5312 mean_circ: 0.929881
Ran for 242050 frames Cell Events: 5319 mean_circ: 0.929899
Ran for 243550 frames Cell Events: 5338 mean_circ: 0.929942
Ran for 244550 frames Cell Events: 5366 mean_circ: 0.930014
Ran for 245050 frames Cell Events: 5379 mean_circ: 0.930024
Ran for 245550 frames Cell Events: 5391 mean_circ: 0.93003
Ran for 246050 frames Cell Events: 5395 mean_circ: 0.930076
Ran for 246550 frames Cell Events: 5404 mean_circ: 0.930124
Ran for 247550 frames Cell Events: 5440 mean_circ: 0.930054
Ran for 248550 frames Cell Events: 5454 mean_circ: 0.930077
Ran for 249050 frames Cell Events: 5473 mean_circ: 0.930019
Ran for 250050 frames Cell Events: 5493 mean_circ: 0.929977
Ran for 250550 frames Cell Events: 5500 mean_circ: 0.930009
Ran for 251050 frames Cell Events: 5506 mean_circ: 0.930028
Ran for 252050 frames Cell Events: 5524 mean_circ: 0.930032
Ran for 252550 frames Cell Events: 5527 mean_circ: 0.930035
Ran for 253050 frames Cell Events: 5529 mean_circ: 0.930043
Ran for 253550 frames Cell Events: 5537 mean_circ: 0.930078
Ran for 254050 frames Cell Events: 5546 mean_circ: 0.930053
Ran for 254550 frames Cell Events: 5558 mean_circ: 0.930007
Ran for 255050 frames Cell Events: 5570 mean_circ: 0.930047
Ran for 255550 frames Cell Events: 5581 mean_circ: 0.930064
Ran for 256050 frames Cell Events: 5593 mean_circ: 0.930089
Ran for 256550 frames Cell Events: 5608 mean_circ: 0.930124
Ran for 257050 frames Cell Events: 5618 mean_circ: 0.930145
Ran for 257550 frames Cell Events: 5634 mean_circ: 0.930165
Ran for 258050 frames Cell Events: 5649 mean_circ: 0.930192
Ran for 258550 frames Cell Events: 5669 mean_circ: 0.930149
Ran for 259050 frames Cell Events: 5682 mean_circ: 0.930175
Ran for 259550 frames Cell Events: 5692 mean_circ: 0.930182
Ran for 260050 frames Cell Events: 5708 mean_circ: 0.930196
Ran for 261050 frames Cell Events: 5738 mean_circ: 0.930204
Ran for 261550 frames Cell Events: 5752 mean_circ: 0.930201
Ran for 262550 frames Cell Events: 5772 mean_circ: 0.930239
Ran for 263050 frames Cell Events: 5785 mean_circ: 0.930258
Ran for 263550 frames Cell Events: 5797 mean_circ: 0.930289
Ran for 264050 frames Cell Events: 5808 mean_circ: 0.930245
Ran for 264550 frames Cell Events: 5822 mean_circ: 0.930243
Ran for 265050 frames Cell Events: 5832 mean_circ: 0.930213
Ran for 265550 frames Cell Events: 5840 mean_circ: 0.930211
Ran for 266050 frames Cell Events: 5852 mean_circ: 0.930196
Ran for 266550 frames Cell Events: 5869 mean_circ: 0.930212
Ran for 267050 frames Cell Events: 5883 mean_circ: 0.930208
Ran for 267550 frames Cell Events: 5901 mean_circ: 0.930268
Ran for 268550 frames Cell Events: 5923 mean_circ: 0.93023
Ran for 269050 frames Cell Events: 5936 mean_circ: 0.930223
Ran for 269550 frames Cell Events: 5951 mean_circ: 0.930279
Ran for 270050 frames Cell Events: 5962 mean_circ: 0.930293
Ran for 270550 frames Cell Events: 5977 mean_circ: 0.930287
Ran for 271550 frames Cell Events: 5994 mean_circ: 0.930252
Ran for 272050 frames Cell Events: 6008 mean_circ: 0.930241
Ran for 272550 frames Cell Events: 6021 mean_circ: 0.930239
Ran for 273050 frames Cell Events: 6026 mean_circ: 0.930241
Ran for 273550 frames Cell Events: 6034 mean_circ: 0.930234
Ran for 274050 frames Cell Events: 6044 mean_circ: 0.93026
Ran for 275050 frames Cell Events: 6048 mean_circ: 0.930254
Ran for 275550 frames Cell Events: 6066 mean_circ: 0.930207
Ran for 276050 frames Cell Events: 6084 mean_circ: 0.930224
Ran for 276550 frames Cell Events: 6093 mean_circ: 0.930256
Ran for 277050 frames Cell Events: 6104 mean_circ: 0.930214
Ran for 277550 frames Cell Events: 6114 mean_circ: 0.930233
Ran for 278050 frames Cell Events: 6116 mean_circ: 0.930205
Ran for 278550 frames Cell Events: 6125 mean_circ: 0.930154
Ran for 279050 frames Cell Events: 6138 mean_circ: 0.930194
Ran for 279550 frames Cell Events: 6141 mean_circ: 0.930155
Ran for 280050 frames Cell Events: 6158 mean_circ: 0.930185
Ran for 280550 frames Cell Events: 6172 mean_circ: 0.930229
Ran for 281050 frames Cell Events: 6178 mean_circ: 0.930229
Ran for 281550 frames Cell Events: 6191 mean_circ: 0.930265
Ran for 282050 frames Cell Events: 6199 mean_circ: 0.930275
Ran for 282550 frames Cell Events: 6208 mean_circ: 0.930315
Ran for 283550 frames Cell Events: 6234 mean_circ: 0.93032
Ran for 284050 frames Cell Events: 6242 mean_circ: 0.930318
Ran for 284550 frames Cell Events: 6260 mean_circ: 0.930353
Ran for 285050 frames Cell Events: 6271 mean_circ: 0.930355
Ran for 286050 frames Cell Events: 6292 mean_circ: 0.930339
Ran for 286550 frames Cell Events: 6297 mean_circ: 0.930361
Ran for 287050 frames Cell Events: 6307 mean_circ: 0.930301
Ran for 287550 frames Cell Events: 6316 mean_circ: 0.930311
Ran for 288050 frames Cell Events: 6324 mean_circ: 0.930335
Ran for 288550 frames Cell Events: 6336 mean_circ: 0.930383
Ran for 289050 frames Cell Events: 6341 mean_circ: 0.930377
Ran for 289550 frames Cell Events: 6359 mean_circ: 0.93033
Ran for 290050 frames Cell Events: 6391 mean_circ: 0.930199
Ran for 290550 frames Cell Events: 6406 mean_circ: 0.930205
Ran for 291050 frames Cell Events: 6416 mean_circ: 0.93019
Ran for 291550 frames Cell Events: 6432 mean_circ: 0.930233
Ran for 292550 frames Cell Events: 6464 mean_circ: 0.93023
Ran for 293050 frames Cell Events: 6488 mean_circ: 0.930215
Ran for 294050 frames Cell Events: 6509 mean_circ: 0.930249
Ran for 294550 frames Cell Events: 6522 mean_circ: 0.930243
Ran for 295550 frames Cell Events: 6537 mean_circ: 0.93025
Ran for 296050 frames Cell Events: 6546 mean_circ: 0.930267
Ran for 296550 frames Cell Events: 6554 mean_circ: 0.930293
Ran for 297050 frames Cell Events: 6566 mean_circ: 0.930289
Ran for 297550 frames Cell Events: 6575 mean_circ: 0.930284
Ran for 298550 frames Cell Events: 6595 mean_circ: 0.93026
Ran for 299550 frames Cell Events: 6615 mean_circ: 0.930307
Ran for 300050 frames Cell Events: 6623 mean_circ: 0.930285
Ran for 301050 frames Cell Events: 6648 mean_circ: 0.930204
Ran for 301550 frames Cell Events: 6655 mean_circ: 0.930198
Ran for 302050 frames Cell Events: 6663 mean_circ: 0.930222
Ran for 303050 frames Cell Events: 6683 mean_circ: 0.930278
Ran for 303550 frames Cell Events: 6691 mean_circ: 0.930237
Ran for 304050 frames Cell Events: 6692 mean_circ: 0.930242
Ran for 304550 frames Cell Events: 6699 mean_circ: 0.93023
Ran for 305550 frames Cell Events: 6726 mean_circ: 0.930254
Ran for 306050 frames Cell Events: 6741 mean_circ: 0.930257
Ran for 307050 frames Cell Events: 6781 mean_circ: 0.930253
Ran for 307550 frames Cell Events: 6788 mean_circ: 0.930271
Ran for 308550 frames Cell Events: 6817 mean_circ: 0.930244
Ran for 309050 frames Cell Events: 6824 mean_circ: 0.930252
Ran for 309550 frames Cell Events: 6838 mean_circ: 0.930228
Ran for 310050 frames Cell Events: 6854 mean_circ: 0.930231
Ran for 310550 frames Cell Events: 6862 mean_circ: 0.930228
Ran for 311050 frames Cell Events: 6879 mean_circ: 0.930223
Ran for 311550 frames Cell Events: 6883 mean_circ: 0.930217
Ran for 312050 frames Cell Events: 6886 mean_circ: 0.93023
Ran for 312550 frames Cell Events: 6895 mean_circ: 0.930227
Ran for 313050 frames Cell Events: 6908 mean_circ: 0.930181
Ran for 314550 frames Cell Events: 6928 mean_circ: 0.930167
Ran for 315550 frames Cell Events: 6950 mean_circ: 0.93018
Ran for 316050 frames Cell Events: 6961 mean_circ: 0.93017
Ran for 316550 frames Cell Events: 6972 mean_circ: 0.930173
Ran for 317050 frames Cell Events: 6978 mean_circ: 0.930174
Ran for 317550 frames Cell Events: 6992 mean_circ: 0.930202
Ran for 318050 frames Cell Events: 6999 mean_circ: 0.930205
Ran for 318550 frames Cell Events: 7011 mean_circ: 0.93022
Ran for 319050 frames Cell Events: 7024 mean_circ: 0.930191
Ran for 319550 frames Cell Events: 7043 mean_circ: 0.930255
Ran for 320050 frames Cell Events: 7060 mean_circ: 0.930293
Ran for 321050 frames Cell Events: 7085 mean_circ: 0.930363
Ran for 321550 frames Cell Events: 7097 mean_circ: 0.930357
Ran for 322050 frames Cell Events: 7101 mean_circ: 0.930376
Ran for 322550 frames Cell Events: 7115 mean_circ: 0.9304
Ran for 324050 frames Cell Events: 7144 mean_circ: 0.930441
Ran for 324550 frames Cell Events: 7150 mean_circ: 0.930456
Ran for 325050 frames Cell Events: 7163 mean_circ: 0.930434
Ran for 325550 frames Cell Events: 7182 mean_circ: 0.93044
Ran for 326550 frames Cell Events: 7228 mean_circ: 0.930444
Ran for 327050 frames Cell Events: 7252 mean_circ: 0.93036
Ran for 327550 frames Cell Events: 7266 mean_circ: 0.930359
Ran for 328050 frames Cell Events: 7272 mean_circ: 0.930387
Ran for 328550 frames Cell Events: 7288 mean_circ: 0.930389
Ran for 329050 frames Cell Events: 7301 mean_circ: 0.930403
Ran for 329550 frames Cell Events: 7317 mean_circ: 0.930426
Ran for 331050 frames Cell Events: 7355 mean_circ: 0.930491
Ran for 331550 frames Cell Events: 7364 mean_circ: 0.930491
Ran for 332050 frames Cell Events: 7366 mean_circ: 0.9305
Ran for 332550 frames Cell Events: 7373 mean_circ: 0.930511
Ran for 333050 frames Cell Events: 7376 mean_circ: 0.930513
Ran for 333550 frames Cell Events: 7386 mean_circ: 0.93049
Ran for 334050 frames Cell Events: 7390 mean_circ: 0.930503
Ran for 336550 frames Cell Events: 7450 mean_circ: 0.930563
Ran for 337050 frames Cell Events: 7457 mean_circ: 0.930562
Ran for 337550 frames Cell Events: 7467 mean_circ: 0.930561
Ran for 338050 frames Cell Events: 7479 mean_circ: 0.93052
Ran for 338550 frames Cell Events: 7486 mean_circ: 0.930549
Ran for 339050 frames Cell Events: 7503 mean_circ: 0.930469
Ran for 340050 frames Cell Events: 7530 mean_circ: 0.93051
Ran for 340550 frames Cell Events: 7540 mean_circ: 0.93054
Ran for 341050 frames Cell Events: 7553 mean_circ: 0.930524
Ran for 342550 frames Cell Events: 7585 mean_circ: 0.930576
Ran for 343550 frames Cell Events: 7610 mean_circ: 0.930594
Ran for 344550 frames Cell Events: 7641 mean_circ: 0.930602
Ran for 345050 frames Cell Events: 7645 mean_circ: 0.930595
Ran for 345550 frames Cell Events: 7657 mean_circ: 0.930575
Ran for 346050 frames Cell Events: 7670 mean_circ: 0.930598
Ran for 346550 frames Cell Events: 7685 mean_circ: 0.930597
Ran for 347050 frames Cell Events: 7694 mean_circ: 0.930594
Ran for 348050 frames Cell Events: 7713 mean_circ: 0.930625
Ran for 348550 frames Cell Events: 7719 mean_circ: 0.93064
Ran for 349050 frames Cell Events: 7727 mean_circ: 0.930644
Ran for 349550 frames Cell Events: 7741 mean_circ: 0.930662
Ran for 350550 frames Cell Events: 7768 mean_circ: 0.930713
Ran for 351050 frames Cell Events: 7780 mean_circ: 0.930707
Ran for 351550 frames Cell Events: 7793 mean_circ: 0.93071
Ran for 352050 frames Cell Events: 7808 mean_circ: 0.93073
Ran for 352550 frames Cell Events: 7815 mean_circ: 0.930704
Ran for 353050 frames Cell Events: 7821 mean_circ: 0.930721
Ran for 353550 frames Cell Events: 7834 mean_circ: 0.930738
Ran for 354050 frames Cell Events: 7845 mean_circ: 0.930751
Ran for 354550 frames Cell Events: 7864 mean_circ: 0.930767
Ran for 355050 frames Cell Events: 7879 mean_circ: 0.930755
Ran for 355550 frames Cell Events: 7887 mean_circ: 0.930768
Ran for 356050 frames Cell Events: 7896 mean_circ: 0.930774
Ran for 356550 frames Cell Events: 7909 mean_circ: 0.930785
Ran for 357550 frames Cell Events: 7930 mean_circ: 0.930815
Ran for 358050 frames Cell Events: 7943 mean_circ: 0.93085
Ran for 359550 frames Cell Events: 7966 mean_circ: 0.930866
Ran for 360050 frames Cell Events: 7973 mean_circ: 0.930887
Ran for 360550 frames Cell Events: 7983 mean_circ: 0.93092
Ran for 361050 frames Cell Events: 8003 mean_circ: 0.930955
Ran for 362050 frames Cell Events: 8015 mean_circ: 0.930976
Ran for 362550 frames Cell Events: 8026 mean_circ: 0.931007
Ran for 363550 frames Cell Events: 8049 mean_circ: 0.930965
Ran for 364050 frames Cell Events: 8056 mean_circ: 0.930978
Ran for 364550 frames Cell Events: 8071 mean_circ: 0.931011
Ran for 365050 frames Cell Events: 8084 mean_circ: 0.931026
Ran for 366050 frames Cell Events: 8102 mean_circ: 0.930961
End this measurment..
Stopping time: 5.55892e+008
****************************************
Measurement finished
Mean Circularitiy: 0.930961
Mean Area: 650.089
Mean FL-1 intensity: 3295.21
Mean FL-2 intensity: 4111.39
Mean FL-3 intensity: 0
frames processed: 364149
Total Time: 183268ms
Number of Runs (new bg img) 0
Frames collected: 366363
Skipped frames: 76718
Rescued Frames: 3800909
Samples DAQ: 91590689
Samples written: 183181316
Samples per Channel: 91590658
FPS: 1999.05
Samples per second: 499763
Expected samples/s: 500000
Events: 8105
Events per second: 44.2248
jumped back (PMT): 5781
#Frames read, frequency
# 0 frames :479437
# 1 frames :232486
# 2 frames :6131
# 3 frames :2189
# 4 frames :1367
# 5 frames :496
# 6 frames :1910
# 7 frames :2353
# 8 frames :1255
# 9 frames :718
# 10 frames :852
# 11 frames :688
# 12 frames :592
# 13 frames :500
# 14 frames :332
# 15 frames :290
# 16 frames :253
# 17 frames :197
# 18 frames :135
# 19 frames :89
# 20 frames :83
# 21 frames :49
# 22 frames :40
# 23 frames :26
# 24 frames :31
# 25 frames :37
# 26 frames :32
# 27 frames :13
# 28 frames :24
# 29 frames :15
# 30 frames :12
# 31 frames :12
# 32 frames :11
# 33 frames :5
# 34 frames :2
# 35 frames :4
# 36 frames :6
# 37 frames :1
# 38 frames :3
# 40 frames :2
# 41 frames :2
# 42 frames :1
# 44 frames :1
# 47 frames :1
# 51 frames :1
# 64 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.6282
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0